Multiple sequence alignment - TraesCS3B01G012400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G012400 chr3B 100.000 3242 0 0 1 3242 5602473 5599232 0.000000e+00 5987.0
1 TraesCS3B01G012400 chr3D 89.592 1691 151 10 957 2646 910096 911762 0.000000e+00 2124.0
2 TraesCS3B01G012400 chr3D 87.868 849 94 8 1 846 908790 909632 0.000000e+00 989.0
3 TraesCS3B01G012400 chr3D 79.717 636 109 17 63 683 525755769 525756399 2.970000e-120 442.0
4 TraesCS3B01G012400 chr3D 95.652 115 5 0 842 956 909934 910048 5.520000e-43 185.0
5 TraesCS3B01G012400 chr3A 89.592 1374 112 10 905 2257 8606974 8605611 0.000000e+00 1716.0
6 TraesCS3B01G012400 chr3A 85.277 883 109 13 7 884 8608729 8607863 0.000000e+00 891.0
7 TraesCS3B01G012400 chr3A 84.444 495 54 10 2298 2772 8605607 8605116 1.760000e-127 466.0
8 TraesCS3B01G012400 chr3A 80.282 568 101 11 62 622 19557021 19557584 5.000000e-113 418.0
9 TraesCS3B01G012400 chr3A 94.737 38 2 0 646 683 9009394 9009431 3.490000e-05 60.2
10 TraesCS3B01G012400 chr7D 84.502 613 92 3 74 683 230998631 230998019 1.290000e-168 603.0
11 TraesCS3B01G012400 chr7D 82.537 607 96 10 58 661 630507359 630507958 2.870000e-145 525.0
12 TraesCS3B01G012400 chr5D 81.583 619 98 10 62 670 429282611 429283223 6.250000e-137 497.0
13 TraesCS3B01G012400 chr4A 81.043 633 111 8 55 682 507461846 507461218 2.250000e-136 496.0
14 TraesCS3B01G012400 chr4A 81.333 150 20 4 2773 2921 41041174 41041032 7.350000e-22 115.0
15 TraesCS3B01G012400 chr5A 81.013 632 107 11 57 681 573832724 573833349 1.050000e-134 490.0
16 TraesCS3B01G012400 chrUn 81.169 616 106 8 74 682 195612805 195613417 1.350000e-133 486.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G012400 chr3B 5599232 5602473 3241 True 5987.000000 5987 100.000000 1 3242 1 chr3B.!!$R1 3241
1 TraesCS3B01G012400 chr3D 908790 911762 2972 False 1099.333333 2124 91.037333 1 2646 3 chr3D.!!$F2 2645
2 TraesCS3B01G012400 chr3D 525755769 525756399 630 False 442.000000 442 79.717000 63 683 1 chr3D.!!$F1 620
3 TraesCS3B01G012400 chr3A 8605116 8608729 3613 True 1024.333333 1716 86.437667 7 2772 3 chr3A.!!$R1 2765
4 TraesCS3B01G012400 chr3A 19557021 19557584 563 False 418.000000 418 80.282000 62 622 1 chr3A.!!$F2 560
5 TraesCS3B01G012400 chr7D 230998019 230998631 612 True 603.000000 603 84.502000 74 683 1 chr7D.!!$R1 609
6 TraesCS3B01G012400 chr7D 630507359 630507958 599 False 525.000000 525 82.537000 58 661 1 chr7D.!!$F1 603
7 TraesCS3B01G012400 chr5D 429282611 429283223 612 False 497.000000 497 81.583000 62 670 1 chr5D.!!$F1 608
8 TraesCS3B01G012400 chr4A 507461218 507461846 628 True 496.000000 496 81.043000 55 682 1 chr4A.!!$R2 627
9 TraesCS3B01G012400 chr5A 573832724 573833349 625 False 490.000000 490 81.013000 57 681 1 chr5A.!!$F1 624
10 TraesCS3B01G012400 chrUn 195612805 195613417 612 False 486.000000 486 81.169000 74 682 1 chrUn.!!$F1 608

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
952 2155 0.109226 GTGCTGTGTACGGTCTCTCC 60.109 60.0 0.0 0.0 0.00 3.71 F
1782 3032 0.036294 GGGGCTCCTATGATTACGCC 60.036 60.0 0.0 0.0 36.83 5.68 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2194 3447 0.106669 GGAGGATAAGGGCCACCAAC 60.107 60.0 6.18 2.57 40.13 3.77 R
3070 4345 0.032815 ACCGGCCGACAAAAATTTGG 59.967 50.0 30.73 7.48 42.34 3.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 55 2.534990 CCCACCAATTGCTTTCCCTAA 58.465 47.619 0.00 0.00 0.00 2.69
64 65 7.171508 CCAATTGCTTTCCCTAAACTCTTTTTC 59.828 37.037 0.00 0.00 0.00 2.29
67 68 7.418337 TGCTTTCCCTAAACTCTTTTTCTTT 57.582 32.000 0.00 0.00 0.00 2.52
68 69 7.264947 TGCTTTCCCTAAACTCTTTTTCTTTG 58.735 34.615 0.00 0.00 0.00 2.77
120 123 1.072806 ACCGAAGTACAAAGAACCCCC 59.927 52.381 0.00 0.00 0.00 5.40
130 134 9.555411 AAGTACAAAGAACCCCCAAAATAATAT 57.445 29.630 0.00 0.00 0.00 1.28
166 170 1.373748 ATGGACAACCGAACGACCG 60.374 57.895 0.00 0.00 39.42 4.79
246 251 3.512680 GTCTGACCTTGTCGATAACAGG 58.487 50.000 9.92 5.08 39.58 4.00
281 286 0.394352 CACATGCCCCTAAGGACCAC 60.394 60.000 0.00 0.00 38.24 4.16
356 361 4.852134 TGACACCAAATCTTGTCATTGG 57.148 40.909 0.31 2.38 45.63 3.16
361 366 4.522405 CACCAAATCTTGTCATTGGGTACA 59.478 41.667 8.47 0.00 46.26 2.90
364 369 5.335897 CCAAATCTTGTCATTGGGTACACAG 60.336 44.000 0.00 0.00 39.92 3.66
388 397 0.901580 AGAAACCCTAACCTCGCCGA 60.902 55.000 0.00 0.00 0.00 5.54
392 401 2.131709 CCCTAACCTCGCCGATCCA 61.132 63.158 0.00 0.00 0.00 3.41
399 408 3.798954 CTCGCCGATCCAAGGAGCC 62.799 68.421 0.00 0.00 0.00 4.70
401 410 3.849951 GCCGATCCAAGGAGCCGA 61.850 66.667 13.10 0.00 0.00 5.54
425 434 1.065701 GAATCTACGCTGGAGCTTCGA 59.934 52.381 0.00 0.00 39.32 3.71
461 470 2.164624 CGAACGAACTTGAGGAGGATCT 59.835 50.000 0.00 0.00 33.73 2.75
472 481 1.443828 GAGGATCTGAGCCGGGAAC 59.556 63.158 2.18 0.00 0.00 3.62
482 491 2.261671 CCGGGAACACTGACTCGG 59.738 66.667 0.00 0.00 0.00 4.63
503 513 2.306255 GAAGAAGCGCCCCATCCGTA 62.306 60.000 2.29 0.00 0.00 4.02
536 546 3.933332 CCTTGCGAGAACTAAAACCCTAG 59.067 47.826 1.22 0.00 0.00 3.02
634 659 2.586357 GCTCACCGGCGAAGATCC 60.586 66.667 9.30 0.00 0.00 3.36
699 727 6.618287 AGAAAAGATCGATGTTCACAACAA 57.382 33.333 8.41 0.00 45.86 2.83
701 729 4.410492 AAGATCGATGTTCACAACAAGC 57.590 40.909 0.54 0.00 45.86 4.01
731 759 1.519408 GTGCGAGCTGTTTTCCCTAA 58.481 50.000 0.00 0.00 0.00 2.69
733 761 2.488153 GTGCGAGCTGTTTTCCCTAAAT 59.512 45.455 0.00 0.00 0.00 1.40
827 856 8.968242 ACAAGAAGCAAGATTTTATTTTCGTTC 58.032 29.630 0.00 0.00 0.00 3.95
892 1227 2.434761 GAATTCGATTCTGCAACTGCG 58.565 47.619 0.00 0.00 45.83 5.18
952 2155 0.109226 GTGCTGTGTACGGTCTCTCC 60.109 60.000 0.00 0.00 0.00 3.71
962 2212 2.599677 ACGGTCTCTCCCTCCAATATC 58.400 52.381 0.00 0.00 0.00 1.63
982 2232 2.306255 TACTTTGGCCTCGGATCGGC 62.306 60.000 3.32 1.71 46.83 5.54
986 2236 1.407656 TTGGCCTCGGATCGGCTAAT 61.408 55.000 3.32 0.00 46.73 1.73
1154 2404 3.422303 GTGCAAGTCATGGCGCGA 61.422 61.111 12.10 0.00 0.00 5.87
1230 2480 4.947147 GGCTGGCACACGTGGGAA 62.947 66.667 24.95 7.83 0.00 3.97
1233 2483 1.358759 CTGGCACACGTGGGAAAAC 59.641 57.895 24.95 8.66 0.00 2.43
1234 2484 1.378646 TGGCACACGTGGGAAAACA 60.379 52.632 24.95 11.42 0.00 2.83
1236 2486 0.526739 GGCACACGTGGGAAAACAAC 60.527 55.000 24.95 0.55 0.00 3.32
1254 2504 1.451028 CAAGCTGCTCTACTGCCCC 60.451 63.158 1.00 0.00 43.85 5.80
1275 2525 4.011517 GACGCCGGGGTCCTGAAA 62.012 66.667 34.98 0.00 0.00 2.69
1279 2529 2.669240 CCGGGGTCCTGAAAGTCC 59.331 66.667 0.00 0.00 0.00 3.85
1322 2572 1.227734 CGTGGTTCAACGGGTCCTT 60.228 57.895 0.00 0.00 39.89 3.36
1323 2573 0.816421 CGTGGTTCAACGGGTCCTTT 60.816 55.000 0.00 0.00 39.89 3.11
1408 2658 3.940480 TCCAGGTGCCCCTCTCCA 61.940 66.667 0.00 0.00 39.89 3.86
1467 2717 0.251297 TCCCGTACCTCGTCTGGAAA 60.251 55.000 0.00 0.00 37.94 3.13
1556 2806 2.280052 GCTCTGCAGGATCGGCTC 60.280 66.667 15.13 0.00 0.00 4.70
1557 2807 2.795110 GCTCTGCAGGATCGGCTCT 61.795 63.158 15.13 0.00 0.00 4.09
1597 2847 1.004918 GACCGGTGTGACAAGGAGG 60.005 63.158 14.63 5.53 0.00 4.30
1686 2936 0.179156 GGTACGACATCGGCGAGAAA 60.179 55.000 17.22 0.00 44.95 2.52
1749 2999 3.463585 CAAATGCGCCATGGCCCT 61.464 61.111 30.79 12.75 37.98 5.19
1750 3000 3.149648 AAATGCGCCATGGCCCTC 61.150 61.111 30.79 19.55 37.98 4.30
1782 3032 0.036294 GGGGCTCCTATGATTACGCC 60.036 60.000 0.00 0.00 36.83 5.68
1800 3050 2.671596 GCCAGCTACATCTTCGATCTC 58.328 52.381 0.00 0.00 0.00 2.75
1806 3056 2.540265 ACATCTTCGATCTCCATGGC 57.460 50.000 6.96 0.00 0.00 4.40
1812 3062 0.105593 TCGATCTCCATGGCAAGCTC 59.894 55.000 6.96 0.26 0.00 4.09
1894 3144 1.300931 GCCGAAGCCGATGATGCTA 60.301 57.895 0.00 0.00 38.34 3.49
1903 3153 2.892374 CCGATGATGCTAACAGTGACA 58.108 47.619 0.00 0.00 0.00 3.58
1904 3154 2.604914 CCGATGATGCTAACAGTGACAC 59.395 50.000 0.00 0.00 0.00 3.67
1965 3215 2.695359 GACTACGCATTGTTCTTGGGA 58.305 47.619 0.00 0.00 0.00 4.37
2031 3281 0.586802 GTGGCGTGAAGAGAAACCAC 59.413 55.000 0.00 0.00 40.64 4.16
2034 3284 1.880027 GGCGTGAAGAGAAACCACATT 59.120 47.619 0.00 0.00 0.00 2.71
2046 3296 8.974060 AGAGAAACCACATTTACTACTCAAAA 57.026 30.769 0.00 0.00 0.00 2.44
2063 3313 3.876914 TCAAAACATCGATGCCTATCCAC 59.123 43.478 25.11 0.00 0.00 4.02
2067 3317 2.172505 ACATCGATGCCTATCCACCAAA 59.827 45.455 25.11 0.00 0.00 3.28
2071 3321 2.752354 CGATGCCTATCCACCAAAACAA 59.248 45.455 0.00 0.00 0.00 2.83
2088 3338 5.352643 AAACAAATAAGAAGTTCGACGGG 57.647 39.130 0.00 0.00 0.00 5.28
2107 3357 2.541556 GGAAAGCATACCTGACGAGAC 58.458 52.381 0.00 0.00 0.00 3.36
2193 3446 2.296471 CCCATCAGTAGGATACCACGTC 59.704 54.545 0.00 0.00 44.47 4.34
2194 3447 2.031069 CCATCAGTAGGATACCACGTCG 60.031 54.545 0.00 0.00 44.47 5.12
2208 3461 1.078708 CGTCGTTGGTGGCCCTTAT 60.079 57.895 0.00 0.00 0.00 1.73
2248 3502 2.429971 CCTCCCGACTTTTAGGACCTAC 59.570 54.545 0.00 0.00 0.00 3.18
2257 3511 6.594159 CGACTTTTAGGACCTACATTTGATGT 59.406 38.462 0.00 0.00 46.92 3.06
2258 3512 7.413000 CGACTTTTAGGACCTACATTTGATGTG 60.413 40.741 0.00 0.00 44.60 3.21
2259 3513 7.458397 ACTTTTAGGACCTACATTTGATGTGA 58.542 34.615 0.00 0.00 44.60 3.58
2261 3515 8.877864 TTTTAGGACCTACATTTGATGTGAAT 57.122 30.769 0.00 0.00 44.60 2.57
2262 3516 7.864108 TTAGGACCTACATTTGATGTGAATG 57.136 36.000 0.00 0.00 44.60 2.67
2263 3517 4.641989 AGGACCTACATTTGATGTGAATGC 59.358 41.667 0.00 0.00 44.60 3.56
2264 3518 4.398988 GGACCTACATTTGATGTGAATGCA 59.601 41.667 3.92 0.00 44.60 3.96
2266 3520 5.012239 ACCTACATTTGATGTGAATGCAGT 58.988 37.500 3.92 0.00 44.60 4.40
2267 3521 6.179756 ACCTACATTTGATGTGAATGCAGTA 58.820 36.000 3.92 0.00 44.60 2.74
2268 3522 6.830324 ACCTACATTTGATGTGAATGCAGTAT 59.170 34.615 3.92 0.00 44.60 2.12
2269 3523 7.340232 ACCTACATTTGATGTGAATGCAGTATT 59.660 33.333 3.92 0.00 44.60 1.89
2270 3524 8.192774 CCTACATTTGATGTGAATGCAGTATTT 58.807 33.333 3.92 0.00 44.60 1.40
2271 3525 9.577110 CTACATTTGATGTGAATGCAGTATTTT 57.423 29.630 3.92 0.00 44.60 1.82
2272 3526 8.246908 ACATTTGATGTGAATGCAGTATTTTG 57.753 30.769 0.00 0.00 43.01 2.44
2273 3527 7.332430 ACATTTGATGTGAATGCAGTATTTTGG 59.668 33.333 0.00 0.00 43.01 3.28
2274 3528 5.981088 TGATGTGAATGCAGTATTTTGGT 57.019 34.783 0.00 0.00 0.00 3.67
2275 3529 6.343716 TGATGTGAATGCAGTATTTTGGTT 57.656 33.333 0.00 0.00 0.00 3.67
2276 3530 6.389091 TGATGTGAATGCAGTATTTTGGTTC 58.611 36.000 0.00 0.00 0.00 3.62
2277 3531 5.781210 TGTGAATGCAGTATTTTGGTTCA 57.219 34.783 0.00 0.00 0.00 3.18
2278 3532 6.343716 TGTGAATGCAGTATTTTGGTTCAT 57.656 33.333 0.00 0.00 0.00 2.57
2279 3533 7.459795 TGTGAATGCAGTATTTTGGTTCATA 57.540 32.000 0.00 0.00 0.00 2.15
2280 3534 8.065473 TGTGAATGCAGTATTTTGGTTCATAT 57.935 30.769 0.00 0.00 0.00 1.78
2281 3535 9.183368 TGTGAATGCAGTATTTTGGTTCATATA 57.817 29.630 0.00 0.00 0.00 0.86
2286 3540 9.985730 ATGCAGTATTTTGGTTCATATAATTGG 57.014 29.630 0.00 0.00 0.00 3.16
2287 3541 9.194972 TGCAGTATTTTGGTTCATATAATTGGA 57.805 29.630 0.00 0.00 0.00 3.53
2298 3552 7.013369 GGTTCATATAATTGGAGTCCCTTCAAC 59.987 40.741 6.74 0.00 31.14 3.18
2311 3565 4.332819 GTCCCTTCAACTATCCAATTGTCG 59.667 45.833 4.43 0.00 0.00 4.35
2312 3566 4.224147 TCCCTTCAACTATCCAATTGTCGA 59.776 41.667 4.43 0.00 0.00 4.20
2325 3579 5.937540 TCCAATTGTCGAAAATGCTCTAAGA 59.062 36.000 0.45 0.00 0.00 2.10
2350 3604 1.733389 CGCAAGACACATTTGATGGCC 60.733 52.381 0.00 0.00 43.02 5.36
2353 3607 3.428045 GCAAGACACATTTGATGGCCTAC 60.428 47.826 3.32 0.00 33.60 3.18
2357 3611 5.815581 AGACACATTTGATGGCCTACTTTA 58.184 37.500 3.32 0.00 33.60 1.85
2366 3620 6.235231 TGATGGCCTACTTTACTTTAGAGG 57.765 41.667 3.32 0.00 0.00 3.69
2373 3627 3.527937 ACTTTACTTTAGAGGCCCTGGA 58.472 45.455 0.00 0.00 0.00 3.86
2386 3640 5.314306 AGAGGCCCTGGATTGTTATGATATT 59.686 40.000 0.00 0.00 0.00 1.28
2387 3641 6.505344 AGAGGCCCTGGATTGTTATGATATTA 59.495 38.462 0.00 0.00 0.00 0.98
2388 3642 7.018550 AGAGGCCCTGGATTGTTATGATATTAA 59.981 37.037 0.00 0.00 0.00 1.40
2406 3660 9.961264 TGATATTAAGTACACCACCAATGTTTA 57.039 29.630 0.00 0.00 0.00 2.01
2417 3671 4.700213 CCACCAATGTTTAGGTCCAAGTAG 59.300 45.833 0.00 0.00 35.52 2.57
2428 3682 2.552155 GGTCCAAGTAGTGTGCATGGAA 60.552 50.000 4.55 0.00 41.54 3.53
2429 3683 2.744202 GTCCAAGTAGTGTGCATGGAAG 59.256 50.000 4.55 0.00 41.54 3.46
2453 3707 8.816640 AGATATTTTTAGCACAACCAACAAAG 57.183 30.769 0.00 0.00 0.00 2.77
2458 3712 6.458232 TTTAGCACAACCAACAAAGTGTAT 57.542 33.333 0.00 0.00 34.59 2.29
2511 3766 6.294473 ACCAAAAATATGCACAATGTTTCCA 58.706 32.000 0.00 0.00 29.08 3.53
2596 3851 3.596799 TGTGGAGGGGACGAGGGA 61.597 66.667 0.00 0.00 0.00 4.20
2614 3869 4.362677 AGGGATGTCCTTAAGCTTGTAGA 58.637 43.478 9.86 0.00 45.47 2.59
2646 3901 6.369340 TGCAAATGATTAAGAAAAGTGCATGG 59.631 34.615 0.00 0.00 34.75 3.66
2647 3902 6.591062 GCAAATGATTAAGAAAAGTGCATGGA 59.409 34.615 0.00 0.00 0.00 3.41
2648 3903 7.118101 GCAAATGATTAAGAAAAGTGCATGGAA 59.882 33.333 0.00 0.00 0.00 3.53
2651 3906 9.807649 AATGATTAAGAAAAGTGCATGGAATAC 57.192 29.630 0.00 0.00 0.00 1.89
2652 3907 8.347004 TGATTAAGAAAAGTGCATGGAATACA 57.653 30.769 0.00 0.00 0.00 2.29
2653 3908 8.970020 TGATTAAGAAAAGTGCATGGAATACAT 58.030 29.630 0.00 0.00 41.57 2.29
2668 3923 7.389803 TGGAATACATGTTTGGTGATAAGTG 57.610 36.000 2.30 0.00 0.00 3.16
2669 3924 6.945435 TGGAATACATGTTTGGTGATAAGTGT 59.055 34.615 2.30 0.00 0.00 3.55
2670 3925 7.450014 TGGAATACATGTTTGGTGATAAGTGTT 59.550 33.333 2.30 0.00 0.00 3.32
2671 3926 7.754924 GGAATACATGTTTGGTGATAAGTGTTG 59.245 37.037 2.30 0.00 0.00 3.33
2672 3927 5.452078 ACATGTTTGGTGATAAGTGTTGG 57.548 39.130 0.00 0.00 0.00 3.77
2673 3928 5.136828 ACATGTTTGGTGATAAGTGTTGGA 58.863 37.500 0.00 0.00 0.00 3.53
2675 3930 6.097554 ACATGTTTGGTGATAAGTGTTGGAAA 59.902 34.615 0.00 0.00 0.00 3.13
2676 3931 6.723298 TGTTTGGTGATAAGTGTTGGAAAT 57.277 33.333 0.00 0.00 0.00 2.17
2677 3932 7.118496 TGTTTGGTGATAAGTGTTGGAAATT 57.882 32.000 0.00 0.00 0.00 1.82
2678 3933 7.560368 TGTTTGGTGATAAGTGTTGGAAATTT 58.440 30.769 0.00 0.00 0.00 1.82
2679 3934 8.696374 TGTTTGGTGATAAGTGTTGGAAATTTA 58.304 29.630 0.00 0.00 0.00 1.40
2730 4005 5.616270 TGTGTTTTTCTGCCTCTATGTGTA 58.384 37.500 0.00 0.00 0.00 2.90
2732 4007 5.701290 GTGTTTTTCTGCCTCTATGTGTAGT 59.299 40.000 0.00 0.00 0.00 2.73
2733 4008 5.932303 TGTTTTTCTGCCTCTATGTGTAGTC 59.068 40.000 0.00 0.00 0.00 2.59
2772 4047 4.154717 CGTGCAGTATATGATGAGAGACG 58.845 47.826 0.00 0.00 0.00 4.18
2773 4048 4.083802 CGTGCAGTATATGATGAGAGACGA 60.084 45.833 0.00 0.00 0.00 4.20
2774 4049 5.389778 GTGCAGTATATGATGAGAGACGAG 58.610 45.833 0.00 0.00 0.00 4.18
2775 4050 5.049060 GTGCAGTATATGATGAGAGACGAGT 60.049 44.000 0.00 0.00 0.00 4.18
2776 4051 6.147985 GTGCAGTATATGATGAGAGACGAGTA 59.852 42.308 0.00 0.00 0.00 2.59
2777 4052 6.710744 TGCAGTATATGATGAGAGACGAGTAA 59.289 38.462 0.00 0.00 0.00 2.24
2778 4053 7.391833 TGCAGTATATGATGAGAGACGAGTAAT 59.608 37.037 0.00 0.00 0.00 1.89
2779 4054 7.696035 GCAGTATATGATGAGAGACGAGTAATG 59.304 40.741 0.00 0.00 0.00 1.90
2780 4055 7.696035 CAGTATATGATGAGAGACGAGTAATGC 59.304 40.741 0.00 0.00 0.00 3.56
2781 4056 6.832520 ATATGATGAGAGACGAGTAATGCT 57.167 37.500 0.00 0.00 0.00 3.79
2782 4057 7.929941 ATATGATGAGAGACGAGTAATGCTA 57.070 36.000 0.00 0.00 0.00 3.49
2783 4058 5.681337 TGATGAGAGACGAGTAATGCTAG 57.319 43.478 0.00 0.00 0.00 3.42
2784 4059 5.368989 TGATGAGAGACGAGTAATGCTAGA 58.631 41.667 0.00 0.00 0.00 2.43
2785 4060 5.468409 TGATGAGAGACGAGTAATGCTAGAG 59.532 44.000 0.00 0.00 0.00 2.43
2786 4061 3.562141 TGAGAGACGAGTAATGCTAGAGC 59.438 47.826 0.00 0.00 42.50 4.09
2787 4062 3.813166 GAGAGACGAGTAATGCTAGAGCT 59.187 47.826 2.72 0.00 42.66 4.09
2788 4063 4.963373 AGAGACGAGTAATGCTAGAGCTA 58.037 43.478 2.72 0.00 42.66 3.32
2789 4064 4.753107 AGAGACGAGTAATGCTAGAGCTAC 59.247 45.833 2.72 0.00 42.66 3.58
2790 4065 3.495377 AGACGAGTAATGCTAGAGCTACG 59.505 47.826 2.72 0.00 42.66 3.51
2791 4066 3.204526 ACGAGTAATGCTAGAGCTACGT 58.795 45.455 2.72 0.00 42.66 3.57
2792 4067 4.375272 ACGAGTAATGCTAGAGCTACGTA 58.625 43.478 2.72 0.00 42.66 3.57
2793 4068 4.813161 ACGAGTAATGCTAGAGCTACGTAA 59.187 41.667 2.72 0.00 42.66 3.18
2794 4069 5.295292 ACGAGTAATGCTAGAGCTACGTAAA 59.705 40.000 2.72 0.00 42.66 2.01
2795 4070 6.017275 ACGAGTAATGCTAGAGCTACGTAAAT 60.017 38.462 2.72 0.00 42.66 1.40
2796 4071 7.172190 ACGAGTAATGCTAGAGCTACGTAAATA 59.828 37.037 2.72 0.00 42.66 1.40
2797 4072 8.013947 CGAGTAATGCTAGAGCTACGTAAATAA 58.986 37.037 2.72 0.00 42.66 1.40
2798 4073 9.843334 GAGTAATGCTAGAGCTACGTAAATAAT 57.157 33.333 2.72 0.00 42.66 1.28
2801 4076 8.888579 AATGCTAGAGCTACGTAAATAATTGT 57.111 30.769 2.72 0.00 42.66 2.71
2802 4077 9.976511 AATGCTAGAGCTACGTAAATAATTGTA 57.023 29.630 2.72 0.00 42.66 2.41
2803 4078 8.792831 TGCTAGAGCTACGTAAATAATTGTAC 57.207 34.615 2.72 0.00 42.66 2.90
2804 4079 7.588854 TGCTAGAGCTACGTAAATAATTGTACG 59.411 37.037 13.43 13.43 43.85 3.67
2825 4100 4.795970 GTGATTAACGTAATGAGGCAGG 57.204 45.455 0.00 0.00 0.00 4.85
2826 4101 4.189231 GTGATTAACGTAATGAGGCAGGT 58.811 43.478 0.00 0.00 0.00 4.00
2827 4102 4.034048 GTGATTAACGTAATGAGGCAGGTG 59.966 45.833 0.00 0.00 0.00 4.00
2828 4103 3.688694 TTAACGTAATGAGGCAGGTGT 57.311 42.857 0.00 0.00 0.00 4.16
2829 4104 4.804868 TTAACGTAATGAGGCAGGTGTA 57.195 40.909 0.00 0.00 0.00 2.90
2830 4105 2.961526 ACGTAATGAGGCAGGTGTAG 57.038 50.000 0.00 0.00 0.00 2.74
2831 4106 2.453521 ACGTAATGAGGCAGGTGTAGA 58.546 47.619 0.00 0.00 0.00 2.59
2832 4107 2.829720 ACGTAATGAGGCAGGTGTAGAA 59.170 45.455 0.00 0.00 0.00 2.10
2833 4108 3.119101 ACGTAATGAGGCAGGTGTAGAAG 60.119 47.826 0.00 0.00 0.00 2.85
2834 4109 3.119101 CGTAATGAGGCAGGTGTAGAAGT 60.119 47.826 0.00 0.00 0.00 3.01
2835 4110 4.097437 CGTAATGAGGCAGGTGTAGAAGTA 59.903 45.833 0.00 0.00 0.00 2.24
2836 4111 5.221263 CGTAATGAGGCAGGTGTAGAAGTAT 60.221 44.000 0.00 0.00 0.00 2.12
2837 4112 4.679373 ATGAGGCAGGTGTAGAAGTATG 57.321 45.455 0.00 0.00 0.00 2.39
2838 4113 3.708451 TGAGGCAGGTGTAGAAGTATGA 58.292 45.455 0.00 0.00 0.00 2.15
2839 4114 4.290093 TGAGGCAGGTGTAGAAGTATGAT 58.710 43.478 0.00 0.00 0.00 2.45
2840 4115 4.716784 TGAGGCAGGTGTAGAAGTATGATT 59.283 41.667 0.00 0.00 0.00 2.57
2841 4116 5.028549 AGGCAGGTGTAGAAGTATGATTG 57.971 43.478 0.00 0.00 0.00 2.67
2842 4117 4.130118 GGCAGGTGTAGAAGTATGATTGG 58.870 47.826 0.00 0.00 0.00 3.16
2843 4118 4.141711 GGCAGGTGTAGAAGTATGATTGGA 60.142 45.833 0.00 0.00 0.00 3.53
2844 4119 5.053145 GCAGGTGTAGAAGTATGATTGGAG 58.947 45.833 0.00 0.00 0.00 3.86
2845 4120 5.163405 GCAGGTGTAGAAGTATGATTGGAGA 60.163 44.000 0.00 0.00 0.00 3.71
2846 4121 6.463614 GCAGGTGTAGAAGTATGATTGGAGAT 60.464 42.308 0.00 0.00 0.00 2.75
2847 4122 7.255977 GCAGGTGTAGAAGTATGATTGGAGATA 60.256 40.741 0.00 0.00 0.00 1.98
2848 4123 8.642432 CAGGTGTAGAAGTATGATTGGAGATAA 58.358 37.037 0.00 0.00 0.00 1.75
2849 4124 8.865090 AGGTGTAGAAGTATGATTGGAGATAAG 58.135 37.037 0.00 0.00 0.00 1.73
2850 4125 8.091449 GGTGTAGAAGTATGATTGGAGATAAGG 58.909 40.741 0.00 0.00 0.00 2.69
2851 4126 8.091449 GTGTAGAAGTATGATTGGAGATAAGGG 58.909 40.741 0.00 0.00 0.00 3.95
2852 4127 6.694445 AGAAGTATGATTGGAGATAAGGGG 57.306 41.667 0.00 0.00 0.00 4.79
2853 4128 6.393897 AGAAGTATGATTGGAGATAAGGGGA 58.606 40.000 0.00 0.00 0.00 4.81
2854 4129 6.271159 AGAAGTATGATTGGAGATAAGGGGAC 59.729 42.308 0.00 0.00 0.00 4.46
2855 4130 5.476983 AGTATGATTGGAGATAAGGGGACA 58.523 41.667 0.00 0.00 0.00 4.02
2856 4131 5.911178 AGTATGATTGGAGATAAGGGGACAA 59.089 40.000 0.00 0.00 0.00 3.18
2857 4132 4.503714 TGATTGGAGATAAGGGGACAAC 57.496 45.455 0.00 0.00 0.00 3.32
2858 4133 3.118408 TGATTGGAGATAAGGGGACAACG 60.118 47.826 0.00 0.00 0.00 4.10
2859 4134 1.200519 TGGAGATAAGGGGACAACGG 58.799 55.000 0.00 0.00 0.00 4.44
2860 4135 0.468648 GGAGATAAGGGGACAACGGG 59.531 60.000 0.00 0.00 0.00 5.28
2861 4136 0.179054 GAGATAAGGGGACAACGGGC 60.179 60.000 0.00 0.00 0.00 6.13
2862 4137 1.153025 GATAAGGGGACAACGGGCC 60.153 63.158 0.00 0.00 0.00 5.80
2863 4138 2.619941 GATAAGGGGACAACGGGCCC 62.620 65.000 13.57 13.57 43.91 5.80
2867 4142 4.717313 GGGACAACGGGCCCACTC 62.717 72.222 24.92 9.54 44.07 3.51
2871 4146 4.096003 CAACGGGCCCACTCGGAT 62.096 66.667 24.92 0.00 0.00 4.18
2872 4147 4.096003 AACGGGCCCACTCGGATG 62.096 66.667 24.92 4.83 0.00 3.51
2874 4149 3.781307 CGGGCCCACTCGGATGAA 61.781 66.667 24.92 0.00 0.00 2.57
2875 4150 2.674754 GGGCCCACTCGGATGAAA 59.325 61.111 19.95 0.00 0.00 2.69
2876 4151 1.227383 GGGCCCACTCGGATGAAAT 59.773 57.895 19.95 0.00 0.00 2.17
2877 4152 0.819666 GGGCCCACTCGGATGAAATC 60.820 60.000 19.95 0.00 44.55 2.17
2885 4160 4.759130 CACTCGGATGAAATCAGGAGGGA 61.759 52.174 11.28 0.00 45.94 4.20
2886 4161 6.537012 CACTCGGATGAAATCAGGAGGGAG 62.537 54.167 11.28 6.23 45.94 4.30
2888 4163 2.947127 GATGAAATCAGGAGGGAGGG 57.053 55.000 0.00 0.00 44.70 4.30
2889 4164 2.131023 GATGAAATCAGGAGGGAGGGT 58.869 52.381 0.00 0.00 44.70 4.34
2890 4165 1.289160 TGAAATCAGGAGGGAGGGTG 58.711 55.000 0.00 0.00 0.00 4.61
2891 4166 0.548510 GAAATCAGGAGGGAGGGTGG 59.451 60.000 0.00 0.00 0.00 4.61
2892 4167 0.921256 AAATCAGGAGGGAGGGTGGG 60.921 60.000 0.00 0.00 0.00 4.61
2893 4168 2.865183 AATCAGGAGGGAGGGTGGGG 62.865 65.000 0.00 0.00 0.00 4.96
2951 4226 7.396540 TTTACTTACCTCTACCTTTACTCGG 57.603 40.000 0.00 0.00 0.00 4.63
2952 4227 5.184892 ACTTACCTCTACCTTTACTCGGA 57.815 43.478 0.00 0.00 0.00 4.55
2953 4228 5.574188 ACTTACCTCTACCTTTACTCGGAA 58.426 41.667 0.00 0.00 0.00 4.30
2954 4229 6.012745 ACTTACCTCTACCTTTACTCGGAAA 58.987 40.000 0.00 0.00 0.00 3.13
2955 4230 6.666980 ACTTACCTCTACCTTTACTCGGAAAT 59.333 38.462 0.00 0.00 0.00 2.17
2956 4231 7.179872 ACTTACCTCTACCTTTACTCGGAAATT 59.820 37.037 0.00 0.00 0.00 1.82
2957 4232 6.370186 ACCTCTACCTTTACTCGGAAATTT 57.630 37.500 0.00 0.00 0.00 1.82
2958 4233 6.776744 ACCTCTACCTTTACTCGGAAATTTT 58.223 36.000 0.00 0.00 0.00 1.82
2959 4234 6.877855 ACCTCTACCTTTACTCGGAAATTTTC 59.122 38.462 0.24 0.24 0.00 2.29
2960 4235 6.035758 CCTCTACCTTTACTCGGAAATTTTCG 59.964 42.308 12.88 12.88 0.00 3.46
2961 4236 6.690530 TCTACCTTTACTCGGAAATTTTCGA 58.309 36.000 20.08 20.08 0.00 3.71
2962 4237 7.325694 TCTACCTTTACTCGGAAATTTTCGAT 58.674 34.615 21.42 13.79 34.77 3.59
2963 4238 6.178239 ACCTTTACTCGGAAATTTTCGATG 57.822 37.500 21.42 16.74 34.77 3.84
2964 4239 5.935789 ACCTTTACTCGGAAATTTTCGATGA 59.064 36.000 21.42 10.01 34.77 2.92
2965 4240 6.428771 ACCTTTACTCGGAAATTTTCGATGAA 59.571 34.615 21.42 15.00 34.77 2.57
2966 4241 7.040961 ACCTTTACTCGGAAATTTTCGATGAAA 60.041 33.333 21.42 20.18 34.77 2.69
2967 4242 7.481798 CCTTTACTCGGAAATTTTCGATGAAAG 59.518 37.037 28.50 28.50 37.08 2.62
2968 4243 7.661127 TTACTCGGAAATTTTCGATGAAAGA 57.339 32.000 21.42 3.27 32.93 2.52
2969 4244 6.743575 ACTCGGAAATTTTCGATGAAAGAT 57.256 33.333 21.42 0.12 32.93 2.40
2970 4245 7.145932 ACTCGGAAATTTTCGATGAAAGATT 57.854 32.000 21.42 0.00 32.93 2.40
2971 4246 7.593825 ACTCGGAAATTTTCGATGAAAGATTT 58.406 30.769 21.42 9.82 32.93 2.17
2972 4247 8.082242 ACTCGGAAATTTTCGATGAAAGATTTT 58.918 29.630 21.42 0.00 32.93 1.82
2973 4248 8.226543 TCGGAAATTTTCGATGAAAGATTTTG 57.773 30.769 17.61 0.00 32.93 2.44
2974 4249 7.865385 TCGGAAATTTTCGATGAAAGATTTTGT 59.135 29.630 17.61 0.00 32.93 2.83
2975 4250 9.123709 CGGAAATTTTCGATGAAAGATTTTGTA 57.876 29.630 13.86 0.00 32.93 2.41
2996 4271 8.430801 TTGTAATTCTTTGATGGTTTTGTTGG 57.569 30.769 0.00 0.00 0.00 3.77
2997 4272 7.786030 TGTAATTCTTTGATGGTTTTGTTGGA 58.214 30.769 0.00 0.00 0.00 3.53
2998 4273 8.428063 TGTAATTCTTTGATGGTTTTGTTGGAT 58.572 29.630 0.00 0.00 0.00 3.41
2999 4274 9.271828 GTAATTCTTTGATGGTTTTGTTGGATT 57.728 29.630 0.00 0.00 0.00 3.01
3000 4275 8.750515 AATTCTTTGATGGTTTTGTTGGATTT 57.249 26.923 0.00 0.00 0.00 2.17
3001 4276 7.784633 TTCTTTGATGGTTTTGTTGGATTTC 57.215 32.000 0.00 0.00 0.00 2.17
3002 4277 6.882656 TCTTTGATGGTTTTGTTGGATTTCA 58.117 32.000 0.00 0.00 0.00 2.69
3003 4278 7.507829 TCTTTGATGGTTTTGTTGGATTTCAT 58.492 30.769 0.00 0.00 0.00 2.57
3004 4279 7.656948 TCTTTGATGGTTTTGTTGGATTTCATC 59.343 33.333 0.00 0.00 0.00 2.92
3005 4280 6.669125 TGATGGTTTTGTTGGATTTCATCT 57.331 33.333 0.00 0.00 33.19 2.90
3006 4281 7.065120 TGATGGTTTTGTTGGATTTCATCTT 57.935 32.000 0.00 0.00 33.19 2.40
3007 4282 7.153985 TGATGGTTTTGTTGGATTTCATCTTC 58.846 34.615 0.00 0.00 33.19 2.87
3008 4283 5.527951 TGGTTTTGTTGGATTTCATCTTCG 58.472 37.500 0.00 0.00 0.00 3.79
3009 4284 5.068460 TGGTTTTGTTGGATTTCATCTTCGT 59.932 36.000 0.00 0.00 0.00 3.85
3010 4285 5.983118 GGTTTTGTTGGATTTCATCTTCGTT 59.017 36.000 0.00 0.00 0.00 3.85
3011 4286 6.074356 GGTTTTGTTGGATTTCATCTTCGTTG 60.074 38.462 0.00 0.00 0.00 4.10
3012 4287 6.384258 TTTGTTGGATTTCATCTTCGTTGA 57.616 33.333 0.00 0.00 0.00 3.18
3013 4288 6.573664 TTGTTGGATTTCATCTTCGTTGAT 57.426 33.333 0.00 0.00 0.00 2.57
3014 4289 6.573664 TGTTGGATTTCATCTTCGTTGATT 57.426 33.333 0.00 0.00 0.00 2.57
3015 4290 7.680442 TGTTGGATTTCATCTTCGTTGATTA 57.320 32.000 0.00 0.00 0.00 1.75
3016 4291 8.105097 TGTTGGATTTCATCTTCGTTGATTAA 57.895 30.769 0.00 0.00 0.00 1.40
3017 4292 8.739039 TGTTGGATTTCATCTTCGTTGATTAAT 58.261 29.630 0.00 0.00 0.00 1.40
3018 4293 9.013490 GTTGGATTTCATCTTCGTTGATTAATG 57.987 33.333 0.00 0.00 0.00 1.90
3019 4294 7.195646 TGGATTTCATCTTCGTTGATTAATGC 58.804 34.615 0.00 0.00 0.00 3.56
3020 4295 6.638468 GGATTTCATCTTCGTTGATTAATGCC 59.362 38.462 0.00 0.00 0.00 4.40
3021 4296 5.499139 TTCATCTTCGTTGATTAATGCCC 57.501 39.130 0.00 0.00 0.00 5.36
3022 4297 3.882888 TCATCTTCGTTGATTAATGCCCC 59.117 43.478 0.00 0.00 0.00 5.80
3023 4298 3.358111 TCTTCGTTGATTAATGCCCCA 57.642 42.857 0.00 0.00 0.00 4.96
3024 4299 3.897239 TCTTCGTTGATTAATGCCCCAT 58.103 40.909 0.00 0.00 0.00 4.00
3025 4300 3.882888 TCTTCGTTGATTAATGCCCCATC 59.117 43.478 0.00 0.00 0.00 3.51
3026 4301 2.217750 TCGTTGATTAATGCCCCATCG 58.782 47.619 0.00 0.00 0.00 3.84
3027 4302 2.158885 TCGTTGATTAATGCCCCATCGA 60.159 45.455 0.00 0.00 0.00 3.59
3028 4303 2.813754 CGTTGATTAATGCCCCATCGAT 59.186 45.455 0.00 0.00 0.00 3.59
3029 4304 4.000325 CGTTGATTAATGCCCCATCGATA 59.000 43.478 0.00 0.00 0.00 2.92
3030 4305 4.093408 CGTTGATTAATGCCCCATCGATAG 59.907 45.833 0.00 0.00 0.00 2.08
3031 4306 3.609853 TGATTAATGCCCCATCGATAGC 58.390 45.455 0.00 2.18 0.00 2.97
3032 4307 3.008923 TGATTAATGCCCCATCGATAGCA 59.991 43.478 16.41 16.41 40.00 3.49
3033 4308 3.500448 TTAATGCCCCATCGATAGCAA 57.500 42.857 17.58 3.57 38.99 3.91
3034 4309 1.901591 AATGCCCCATCGATAGCAAG 58.098 50.000 17.58 0.00 38.99 4.01
3035 4310 0.767375 ATGCCCCATCGATAGCAAGT 59.233 50.000 17.58 3.57 38.99 3.16
3036 4311 0.546122 TGCCCCATCGATAGCAAGTT 59.454 50.000 12.90 0.00 30.97 2.66
3037 4312 1.765904 TGCCCCATCGATAGCAAGTTA 59.234 47.619 12.90 0.00 30.97 2.24
3038 4313 2.171659 TGCCCCATCGATAGCAAGTTAA 59.828 45.455 12.90 0.00 30.97 2.01
3039 4314 3.211045 GCCCCATCGATAGCAAGTTAAA 58.789 45.455 0.00 0.00 0.00 1.52
3040 4315 3.630312 GCCCCATCGATAGCAAGTTAAAA 59.370 43.478 0.00 0.00 0.00 1.52
3041 4316 4.261197 GCCCCATCGATAGCAAGTTAAAAG 60.261 45.833 0.00 0.00 0.00 2.27
3042 4317 4.275936 CCCCATCGATAGCAAGTTAAAAGG 59.724 45.833 0.00 0.00 0.00 3.11
3043 4318 4.275936 CCCATCGATAGCAAGTTAAAAGGG 59.724 45.833 0.00 0.00 0.00 3.95
3044 4319 4.275936 CCATCGATAGCAAGTTAAAAGGGG 59.724 45.833 0.00 0.00 0.00 4.79
3045 4320 3.275999 TCGATAGCAAGTTAAAAGGGGC 58.724 45.455 0.00 0.00 0.00 5.80
3046 4321 3.054655 TCGATAGCAAGTTAAAAGGGGCT 60.055 43.478 0.00 0.00 35.50 5.19
3047 4322 4.162698 TCGATAGCAAGTTAAAAGGGGCTA 59.837 41.667 0.00 0.00 38.12 3.93
3048 4323 4.879545 CGATAGCAAGTTAAAAGGGGCTAA 59.120 41.667 0.00 0.00 37.39 3.09
3049 4324 5.531287 CGATAGCAAGTTAAAAGGGGCTAAT 59.469 40.000 0.00 0.00 37.39 1.73
3050 4325 6.293462 CGATAGCAAGTTAAAAGGGGCTAATC 60.293 42.308 0.00 0.00 37.39 1.75
3051 4326 4.672899 AGCAAGTTAAAAGGGGCTAATCA 58.327 39.130 0.00 0.00 0.00 2.57
3052 4327 4.706962 AGCAAGTTAAAAGGGGCTAATCAG 59.293 41.667 0.00 0.00 0.00 2.90
3053 4328 4.142160 GCAAGTTAAAAGGGGCTAATCAGG 60.142 45.833 0.00 0.00 0.00 3.86
3054 4329 3.632333 AGTTAAAAGGGGCTAATCAGGC 58.368 45.455 0.00 0.00 46.47 4.85
3066 4341 6.396829 GGCTAATCAGGCATAGTTCATTTT 57.603 37.500 0.00 0.00 46.44 1.82
3067 4342 6.442112 GGCTAATCAGGCATAGTTCATTTTC 58.558 40.000 0.00 0.00 46.44 2.29
3068 4343 6.264067 GGCTAATCAGGCATAGTTCATTTTCT 59.736 38.462 0.00 0.00 46.44 2.52
3069 4344 7.137426 GCTAATCAGGCATAGTTCATTTTCTG 58.863 38.462 0.00 0.00 0.00 3.02
3070 4345 4.970662 TCAGGCATAGTTCATTTTCTGC 57.029 40.909 0.00 0.00 0.00 4.26
3073 4348 4.454728 GGCATAGTTCATTTTCTGCCAA 57.545 40.909 6.50 0.00 46.54 4.52
3074 4349 4.819769 GGCATAGTTCATTTTCTGCCAAA 58.180 39.130 6.50 0.00 46.54 3.28
3075 4350 5.422145 GGCATAGTTCATTTTCTGCCAAAT 58.578 37.500 6.50 0.00 46.54 2.32
3076 4351 5.876460 GGCATAGTTCATTTTCTGCCAAATT 59.124 36.000 6.50 0.00 46.54 1.82
3077 4352 6.372381 GGCATAGTTCATTTTCTGCCAAATTT 59.628 34.615 6.50 0.00 46.54 1.82
3078 4353 7.094677 GGCATAGTTCATTTTCTGCCAAATTTT 60.095 33.333 6.50 0.00 46.54 1.82
3079 4354 8.291740 GCATAGTTCATTTTCTGCCAAATTTTT 58.708 29.630 0.00 0.00 0.00 1.94
3080 4355 9.601971 CATAGTTCATTTTCTGCCAAATTTTTG 57.398 29.630 0.00 0.00 37.90 2.44
3081 4356 7.628769 AGTTCATTTTCTGCCAAATTTTTGT 57.371 28.000 2.63 0.00 36.45 2.83
3082 4357 7.696755 AGTTCATTTTCTGCCAAATTTTTGTC 58.303 30.769 2.63 0.00 36.45 3.18
3083 4358 6.284475 TCATTTTCTGCCAAATTTTTGTCG 57.716 33.333 2.63 0.00 36.45 4.35
3084 4359 5.236047 TCATTTTCTGCCAAATTTTTGTCGG 59.764 36.000 2.63 0.00 36.45 4.79
3085 4360 2.147436 TCTGCCAAATTTTTGTCGGC 57.853 45.000 9.06 9.06 36.45 5.54
3086 4361 1.147473 CTGCCAAATTTTTGTCGGCC 58.853 50.000 12.50 0.00 36.45 6.13
3087 4362 0.598680 TGCCAAATTTTTGTCGGCCG 60.599 50.000 22.12 22.12 36.45 6.13
3088 4363 1.288419 GCCAAATTTTTGTCGGCCGG 61.288 55.000 27.83 6.80 36.45 6.13
3089 4364 0.032815 CCAAATTTTTGTCGGCCGGT 59.967 50.000 27.83 0.00 36.45 5.28
3090 4365 1.539280 CCAAATTTTTGTCGGCCGGTT 60.539 47.619 27.83 6.26 36.45 4.44
3091 4366 1.524776 CAAATTTTTGTCGGCCGGTTG 59.475 47.619 27.83 12.36 33.59 3.77
3092 4367 0.032815 AATTTTTGTCGGCCGGTTGG 59.967 50.000 27.83 0.00 38.77 3.77
3093 4368 1.110518 ATTTTTGTCGGCCGGTTGGT 61.111 50.000 27.83 2.73 37.67 3.67
3094 4369 1.321074 TTTTTGTCGGCCGGTTGGTT 61.321 50.000 27.83 0.00 37.67 3.67
3095 4370 0.465097 TTTTGTCGGCCGGTTGGTTA 60.465 50.000 27.83 0.00 37.67 2.85
3096 4371 0.465097 TTTGTCGGCCGGTTGGTTAA 60.465 50.000 27.83 7.44 37.67 2.01
3097 4372 0.465097 TTGTCGGCCGGTTGGTTAAA 60.465 50.000 27.83 0.00 37.67 1.52
3098 4373 0.250814 TGTCGGCCGGTTGGTTAAAT 60.251 50.000 27.83 0.00 37.67 1.40
3099 4374 0.883153 GTCGGCCGGTTGGTTAAATT 59.117 50.000 27.83 0.00 37.67 1.82
3100 4375 1.270274 GTCGGCCGGTTGGTTAAATTT 59.730 47.619 27.83 0.00 37.67 1.82
3101 4376 1.962100 TCGGCCGGTTGGTTAAATTTT 59.038 42.857 27.83 0.00 37.67 1.82
3102 4377 2.364647 TCGGCCGGTTGGTTAAATTTTT 59.635 40.909 27.83 0.00 37.67 1.94
3103 4378 2.476997 CGGCCGGTTGGTTAAATTTTTG 59.523 45.455 20.10 0.00 37.67 2.44
3104 4379 2.224549 GGCCGGTTGGTTAAATTTTTGC 59.775 45.455 1.90 0.00 37.67 3.68
3105 4380 2.224549 GCCGGTTGGTTAAATTTTTGCC 59.775 45.455 1.90 0.00 37.67 4.52
3106 4381 2.809119 CCGGTTGGTTAAATTTTTGCCC 59.191 45.455 0.00 0.00 0.00 5.36
3107 4382 2.809119 CGGTTGGTTAAATTTTTGCCCC 59.191 45.455 0.00 0.00 0.00 5.80
3108 4383 3.150767 GGTTGGTTAAATTTTTGCCCCC 58.849 45.455 0.00 0.00 0.00 5.40
3125 4400 1.446366 CCCCCGAAAGTAGCTAGCC 59.554 63.158 12.13 0.00 0.00 3.93
3126 4401 1.446366 CCCCGAAAGTAGCTAGCCC 59.554 63.158 12.13 2.00 0.00 5.19
3127 4402 1.446366 CCCGAAAGTAGCTAGCCCC 59.554 63.158 12.13 1.58 0.00 5.80
3128 4403 1.446366 CCGAAAGTAGCTAGCCCCC 59.554 63.158 12.13 0.00 0.00 5.40
3144 4419 3.347590 CCCTGGGGAGGGGTTTCC 61.348 72.222 4.27 0.00 45.34 3.13
3165 4440 3.356212 GGGGGAAAAGGGAGGGGG 61.356 72.222 0.00 0.00 0.00 5.40
3166 4441 2.204401 GGGGAAAAGGGAGGGGGA 60.204 66.667 0.00 0.00 0.00 4.81
3167 4442 2.623450 GGGGAAAAGGGAGGGGGAC 61.623 68.421 0.00 0.00 0.00 4.46
3168 4443 1.855451 GGGAAAAGGGAGGGGGACA 60.855 63.158 0.00 0.00 0.00 4.02
3169 4444 1.221909 GGGAAAAGGGAGGGGGACAT 61.222 60.000 0.00 0.00 0.00 3.06
3170 4445 1.603634 GGAAAAGGGAGGGGGACATA 58.396 55.000 0.00 0.00 0.00 2.29
3171 4446 1.927371 GGAAAAGGGAGGGGGACATAA 59.073 52.381 0.00 0.00 0.00 1.90
3172 4447 2.313643 GGAAAAGGGAGGGGGACATAAA 59.686 50.000 0.00 0.00 0.00 1.40
3173 4448 3.362706 GAAAAGGGAGGGGGACATAAAC 58.637 50.000 0.00 0.00 0.00 2.01
3174 4449 1.305886 AAGGGAGGGGGACATAAACC 58.694 55.000 0.00 0.00 0.00 3.27
3175 4450 0.626574 AGGGAGGGGGACATAAACCC 60.627 60.000 0.00 0.00 46.59 4.11
3197 4472 6.709018 CCCCCAAATTAAGTATGACGAAAT 57.291 37.500 0.00 0.00 0.00 2.17
3198 4473 7.107639 CCCCCAAATTAAGTATGACGAAATT 57.892 36.000 0.00 0.00 0.00 1.82
3199 4474 7.552459 CCCCCAAATTAAGTATGACGAAATTT 58.448 34.615 0.00 0.00 0.00 1.82
3200 4475 8.038351 CCCCCAAATTAAGTATGACGAAATTTT 58.962 33.333 0.00 0.00 0.00 1.82
3201 4476 9.430623 CCCCAAATTAAGTATGACGAAATTTTT 57.569 29.630 0.00 0.00 0.00 1.94
3240 4515 2.443168 GGGGGAGCTACCTAAGAGC 58.557 63.158 16.60 0.00 40.42 4.09
3241 4516 0.398664 GGGGGAGCTACCTAAGAGCA 60.399 60.000 16.60 0.00 42.69 4.26
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 5.244626 GTGGGCTAATTATGCATTGGAGATT 59.755 40.000 3.54 1.23 0.00 2.40
114 117 8.369424 GGCGTAATTTATATTATTTTGGGGGTT 58.631 33.333 0.00 0.00 0.00 4.11
120 123 9.537848 GACCTCGGCGTAATTTATATTATTTTG 57.462 33.333 6.85 0.00 0.00 2.44
130 134 2.484065 CCATGGACCTCGGCGTAATTTA 60.484 50.000 5.56 0.00 0.00 1.40
166 170 4.072088 CGTTCTGGCGGCGTCAAC 62.072 66.667 17.49 11.26 0.00 3.18
246 251 0.874390 TGTGCATGAAGACTTTCCGC 59.126 50.000 0.00 0.00 33.58 5.54
356 361 2.105993 AGGGTTTCTTGTCCTGTGTACC 59.894 50.000 0.00 0.00 0.00 3.34
361 366 3.053826 AGGTTAGGGTTTCTTGTCCTGT 58.946 45.455 0.00 0.00 32.46 4.00
364 369 2.696506 CGAGGTTAGGGTTTCTTGTCC 58.303 52.381 0.00 0.00 0.00 4.02
388 397 0.909610 TTCCTGTCGGCTCCTTGGAT 60.910 55.000 0.00 0.00 0.00 3.41
392 401 1.757699 GTAGATTCCTGTCGGCTCCTT 59.242 52.381 0.00 0.00 0.00 3.36
399 408 0.738975 TCCAGCGTAGATTCCTGTCG 59.261 55.000 0.00 0.00 0.00 4.35
401 410 0.461961 GCTCCAGCGTAGATTCCTGT 59.538 55.000 0.00 0.00 0.00 4.00
425 434 1.734163 GTTCGTCGGGATGGATTTGT 58.266 50.000 0.00 0.00 0.00 2.83
461 470 1.816863 GAGTCAGTGTTCCCGGCTCA 61.817 60.000 0.00 0.00 0.00 4.26
472 481 1.730772 CGCTTCTTCTCCGAGTCAGTG 60.731 57.143 0.00 0.00 0.00 3.66
482 491 1.524849 GGATGGGGCGCTTCTTCTC 60.525 63.158 7.64 0.00 0.00 2.87
593 615 1.439644 GATTCGCCTTCTCTCCGCT 59.560 57.895 0.00 0.00 0.00 5.52
634 659 1.076187 AGGGAAAGCCTTCTTCCCTTG 59.924 52.381 15.94 0.00 42.33 3.61
699 727 1.001020 TCGCACCATTCCCAATGCT 60.001 52.632 0.00 0.00 37.57 3.79
701 729 1.033746 AGCTCGCACCATTCCCAATG 61.034 55.000 0.00 0.00 38.63 2.82
731 759 5.485620 GTTCTTGAAGGTACGTTAGGGATT 58.514 41.667 0.00 0.00 0.00 3.01
733 761 3.259123 GGTTCTTGAAGGTACGTTAGGGA 59.741 47.826 0.00 0.00 0.00 4.20
840 1175 1.534163 GTGTTCCTGCGGTTTCTTACC 59.466 52.381 0.00 0.00 44.03 2.85
892 1227 2.072298 GCACATCTCTGACAGAACCAC 58.928 52.381 6.61 0.00 33.62 4.16
962 2212 0.249489 CCGATCCGAGGCCAAAGTAG 60.249 60.000 5.01 0.00 0.00 2.57
982 2232 4.905866 CGCCATCGCAGATTTGTTAATTAG 59.094 41.667 0.00 0.00 45.12 1.73
986 2236 2.095213 GTCGCCATCGCAGATTTGTTAA 59.905 45.455 0.00 0.00 45.12 2.01
1084 2334 2.990479 GACCTTGGAGCGGACCAT 59.010 61.111 0.00 0.00 39.82 3.55
1137 2387 3.422303 TCGCGCCATGACTTGCAC 61.422 61.111 0.00 0.00 0.00 4.57
1214 2464 2.485795 TTTTCCCACGTGTGCCAGC 61.486 57.895 15.65 0.00 0.00 4.85
1219 2469 2.525055 CTTGTTGTTTTCCCACGTGTG 58.475 47.619 15.65 2.45 0.00 3.82
1220 2470 1.135228 GCTTGTTGTTTTCCCACGTGT 60.135 47.619 15.65 0.00 0.00 4.49
1225 2475 1.408702 GAGCAGCTTGTTGTTTTCCCA 59.591 47.619 0.00 0.00 0.00 4.37
1226 2476 1.683385 AGAGCAGCTTGTTGTTTTCCC 59.317 47.619 0.00 0.00 0.00 3.97
1230 2480 2.291741 GCAGTAGAGCAGCTTGTTGTTT 59.708 45.455 0.00 0.00 0.00 2.83
1233 2483 0.801251 GGCAGTAGAGCAGCTTGTTG 59.199 55.000 0.00 0.00 35.83 3.33
1234 2484 0.322008 GGGCAGTAGAGCAGCTTGTT 60.322 55.000 0.00 0.00 35.83 2.83
1236 2486 1.451028 GGGGCAGTAGAGCAGCTTG 60.451 63.158 0.00 0.00 35.83 4.01
1300 2550 3.656045 CCCGTTGAACCACGTGCC 61.656 66.667 10.91 1.78 38.57 5.01
1322 2572 4.812476 CGATCCAGCCGCCGTCAA 62.812 66.667 0.00 0.00 0.00 3.18
1408 2658 0.107945 GCGATGGTCCTCTGCTTCTT 60.108 55.000 0.00 0.00 0.00 2.52
1467 2717 2.647158 GGCCTCGGAGAAGACGGTT 61.647 63.158 6.58 0.00 34.09 4.44
1504 2754 4.899239 GGTGATGGCGGCGAGGAG 62.899 72.222 12.98 0.00 0.00 3.69
1542 2792 2.420890 GGAGAGCCGATCCTGCAG 59.579 66.667 6.78 6.78 33.77 4.41
1587 2837 2.283529 GCCGAGTCCCTCCTTGTCA 61.284 63.158 0.00 0.00 0.00 3.58
1649 2899 0.600255 CCTGAACACGTCCTCGCTTT 60.600 55.000 0.00 0.00 41.18 3.51
1650 2900 1.006102 CCTGAACACGTCCTCGCTT 60.006 57.895 0.00 0.00 41.18 4.68
1723 2973 1.184431 TGGCGCATTTGGACATTGAT 58.816 45.000 10.83 0.00 0.00 2.57
1782 3032 3.998099 TGGAGATCGAAGATGTAGCTG 57.002 47.619 0.00 0.00 45.12 4.24
1894 3144 0.248012 TCGTGTGTGGTGTCACTGTT 59.752 50.000 2.35 0.00 43.94 3.16
1903 3153 1.202486 CCACTTGTAGTCGTGTGTGGT 60.202 52.381 0.00 0.00 39.80 4.16
1904 3154 1.497991 CCACTTGTAGTCGTGTGTGG 58.502 55.000 0.00 0.00 38.87 4.17
1965 3215 0.555769 CTCTGGAGGAGGAGGCTAGT 59.444 60.000 0.00 0.00 38.35 2.57
2019 3269 8.603242 TTGAGTAGTAAATGTGGTTTCTCTTC 57.397 34.615 0.00 0.00 0.00 2.87
2022 3272 8.617809 TGTTTTGAGTAGTAAATGTGGTTTCTC 58.382 33.333 0.00 0.00 0.00 2.87
2024 3274 9.394477 GATGTTTTGAGTAGTAAATGTGGTTTC 57.606 33.333 0.00 0.00 0.00 2.78
2031 3281 6.907212 GGCATCGATGTTTTGAGTAGTAAATG 59.093 38.462 25.47 0.00 0.00 2.32
2034 3284 5.730550 AGGCATCGATGTTTTGAGTAGTAA 58.269 37.500 25.47 0.00 0.00 2.24
2046 3296 1.423584 TGGTGGATAGGCATCGATGT 58.576 50.000 25.47 10.33 31.33 3.06
2063 3313 5.623673 CCGTCGAACTTCTTATTTGTTTTGG 59.376 40.000 0.00 0.00 0.00 3.28
2067 3317 4.634199 TCCCGTCGAACTTCTTATTTGTT 58.366 39.130 0.00 0.00 0.00 2.83
2071 3321 3.683340 GCTTTCCCGTCGAACTTCTTATT 59.317 43.478 0.00 0.00 0.00 1.40
2088 3338 2.166664 AGGTCTCGTCAGGTATGCTTTC 59.833 50.000 0.00 0.00 0.00 2.62
2107 3357 1.273606 CATCCAGTCGCCACCTATAGG 59.726 57.143 17.73 17.73 42.17 2.57
2122 3372 5.114764 TGATCTTCCTTGCAATACATCCA 57.885 39.130 0.00 0.00 0.00 3.41
2175 3428 2.928334 ACGACGTGGTATCCTACTGAT 58.072 47.619 0.00 0.00 37.49 2.90
2179 3432 2.199291 CCAACGACGTGGTATCCTAC 57.801 55.000 2.83 0.00 33.63 3.18
2193 3446 0.463833 GAGGATAAGGGCCACCAACG 60.464 60.000 6.18 0.00 40.13 4.10
2194 3447 0.106669 GGAGGATAAGGGCCACCAAC 60.107 60.000 6.18 2.57 40.13 3.77
2208 3461 1.267121 GTAAGCACCAGACAGGAGGA 58.733 55.000 0.00 0.00 41.22 3.71
2248 3502 7.332430 ACCAAAATACTGCATTCACATCAAATG 59.668 33.333 0.00 0.00 37.21 2.32
2261 3515 9.194972 TCCAATTATATGAACCAAAATACTGCA 57.805 29.630 0.00 0.00 0.00 4.41
2262 3516 9.683069 CTCCAATTATATGAACCAAAATACTGC 57.317 33.333 0.00 0.00 0.00 4.40
2266 3520 9.362151 GGGACTCCAATTATATGAACCAAAATA 57.638 33.333 0.00 0.00 0.00 1.40
2267 3521 8.067488 AGGGACTCCAATTATATGAACCAAAAT 58.933 33.333 0.00 0.00 34.83 1.82
2268 3522 7.418378 AGGGACTCCAATTATATGAACCAAAA 58.582 34.615 0.00 0.00 34.83 2.44
2269 3523 6.980577 AGGGACTCCAATTATATGAACCAAA 58.019 36.000 0.00 0.00 34.83 3.28
2270 3524 6.590656 AGGGACTCCAATTATATGAACCAA 57.409 37.500 0.00 0.00 34.83 3.67
2271 3525 6.159575 TGAAGGGACTCCAATTATATGAACCA 59.840 38.462 0.00 0.00 38.49 3.67
2272 3526 6.601332 TGAAGGGACTCCAATTATATGAACC 58.399 40.000 0.00 0.00 38.49 3.62
2273 3527 7.775561 AGTTGAAGGGACTCCAATTATATGAAC 59.224 37.037 0.00 0.00 33.47 3.18
2274 3528 7.872138 AGTTGAAGGGACTCCAATTATATGAA 58.128 34.615 0.00 0.00 33.47 2.57
2275 3529 7.451731 AGTTGAAGGGACTCCAATTATATGA 57.548 36.000 0.00 0.00 33.47 2.15
2276 3530 9.442047 GATAGTTGAAGGGACTCCAATTATATG 57.558 37.037 0.00 0.00 35.93 1.78
2277 3531 8.606830 GGATAGTTGAAGGGACTCCAATTATAT 58.393 37.037 0.00 0.00 35.93 0.86
2278 3532 7.570982 TGGATAGTTGAAGGGACTCCAATTATA 59.429 37.037 0.00 0.00 35.93 0.98
2279 3533 6.389869 TGGATAGTTGAAGGGACTCCAATTAT 59.610 38.462 0.00 0.00 38.20 1.28
2280 3534 5.729229 TGGATAGTTGAAGGGACTCCAATTA 59.271 40.000 0.00 0.00 33.47 1.40
2281 3535 4.540099 TGGATAGTTGAAGGGACTCCAATT 59.460 41.667 0.00 0.00 33.47 2.32
2282 3536 4.111577 TGGATAGTTGAAGGGACTCCAAT 58.888 43.478 0.00 0.00 33.47 3.16
2283 3537 3.526899 TGGATAGTTGAAGGGACTCCAA 58.473 45.455 0.00 0.00 38.49 3.53
2284 3538 3.199442 TGGATAGTTGAAGGGACTCCA 57.801 47.619 0.00 0.00 38.49 3.86
2285 3539 4.779993 ATTGGATAGTTGAAGGGACTCC 57.220 45.455 0.00 0.00 38.49 3.85
2286 3540 5.501156 ACAATTGGATAGTTGAAGGGACTC 58.499 41.667 10.83 0.00 38.49 3.36
2290 3544 4.513442 TCGACAATTGGATAGTTGAAGGG 58.487 43.478 10.83 0.00 0.00 3.95
2298 3552 6.369059 AGAGCATTTTCGACAATTGGATAG 57.631 37.500 10.83 0.00 0.00 2.08
2311 3565 3.181497 TGCGCCAATCTTAGAGCATTTTC 60.181 43.478 4.18 0.00 0.00 2.29
2312 3566 2.754552 TGCGCCAATCTTAGAGCATTTT 59.245 40.909 4.18 0.00 0.00 1.82
2325 3579 1.612950 TCAAATGTGTCTTGCGCCAAT 59.387 42.857 4.18 0.00 0.00 3.16
2339 3593 8.506168 TCTAAAGTAAAGTAGGCCATCAAATG 57.494 34.615 5.01 0.00 0.00 2.32
2350 3604 4.715297 TCCAGGGCCTCTAAAGTAAAGTAG 59.285 45.833 0.95 0.00 0.00 2.57
2353 3607 4.779993 ATCCAGGGCCTCTAAAGTAAAG 57.220 45.455 0.95 0.00 0.00 1.85
2357 3611 2.279173 ACAATCCAGGGCCTCTAAAGT 58.721 47.619 0.95 0.00 0.00 2.66
2366 3620 8.947115 GTACTTAATATCATAACAATCCAGGGC 58.053 37.037 0.00 0.00 0.00 5.19
2386 3640 6.190346 ACCTAAACATTGGTGGTGTACTTA 57.810 37.500 0.00 0.00 34.90 2.24
2387 3641 5.056553 ACCTAAACATTGGTGGTGTACTT 57.943 39.130 0.00 0.00 34.90 2.24
2388 3642 4.506095 GGACCTAAACATTGGTGGTGTACT 60.506 45.833 0.00 0.00 36.59 2.73
2397 3651 5.181245 CACACTACTTGGACCTAAACATTGG 59.819 44.000 0.00 0.00 0.00 3.16
2406 3660 1.003580 CCATGCACACTACTTGGACCT 59.996 52.381 0.00 0.00 34.99 3.85
2417 3671 6.473455 GTGCTAAAAATATCTTCCATGCACAC 59.527 38.462 0.00 0.00 44.12 3.82
2428 3682 8.421002 ACTTTGTTGGTTGTGCTAAAAATATCT 58.579 29.630 0.00 0.00 0.00 1.98
2429 3683 8.487176 CACTTTGTTGGTTGTGCTAAAAATATC 58.513 33.333 0.00 0.00 0.00 1.63
2538 3793 8.824783 TCCAAACCTTCCATCAATAATTTTCAT 58.175 29.630 0.00 0.00 0.00 2.57
2545 3800 6.074648 ACTTGTCCAAACCTTCCATCAATAA 58.925 36.000 0.00 0.00 0.00 1.40
2550 3805 5.125578 GGATTACTTGTCCAAACCTTCCATC 59.874 44.000 0.00 0.00 35.76 3.51
2596 3851 5.127194 TCACGATCTACAAGCTTAAGGACAT 59.873 40.000 0.00 0.00 0.00 3.06
2614 3869 8.246180 ACTTTTCTTAATCATTTGCATCACGAT 58.754 29.630 0.00 0.00 0.00 3.73
2646 3901 7.754924 CCAACACTTATCACCAAACATGTATTC 59.245 37.037 0.00 0.00 0.00 1.75
2647 3902 7.450014 TCCAACACTTATCACCAAACATGTATT 59.550 33.333 0.00 0.00 0.00 1.89
2648 3903 6.945435 TCCAACACTTATCACCAAACATGTAT 59.055 34.615 0.00 0.00 0.00 2.29
2650 3905 5.136828 TCCAACACTTATCACCAAACATGT 58.863 37.500 0.00 0.00 0.00 3.21
2651 3906 5.703978 TCCAACACTTATCACCAAACATG 57.296 39.130 0.00 0.00 0.00 3.21
2652 3907 6.723298 TTTCCAACACTTATCACCAAACAT 57.277 33.333 0.00 0.00 0.00 2.71
2653 3908 6.723298 ATTTCCAACACTTATCACCAAACA 57.277 33.333 0.00 0.00 0.00 2.83
2654 3909 9.191995 CTAAATTTCCAACACTTATCACCAAAC 57.808 33.333 0.00 0.00 0.00 2.93
2655 3910 8.364142 CCTAAATTTCCAACACTTATCACCAAA 58.636 33.333 0.00 0.00 0.00 3.28
2656 3911 7.524698 GCCTAAATTTCCAACACTTATCACCAA 60.525 37.037 0.00 0.00 0.00 3.67
2657 3912 6.071616 GCCTAAATTTCCAACACTTATCACCA 60.072 38.462 0.00 0.00 0.00 4.17
2658 3913 6.071616 TGCCTAAATTTCCAACACTTATCACC 60.072 38.462 0.00 0.00 0.00 4.02
2659 3914 6.919721 TGCCTAAATTTCCAACACTTATCAC 58.080 36.000 0.00 0.00 0.00 3.06
2660 3915 7.716799 ATGCCTAAATTTCCAACACTTATCA 57.283 32.000 0.00 0.00 0.00 2.15
2718 3993 4.737855 TTCTTGGACTACACATAGAGGC 57.262 45.455 0.00 0.00 32.23 4.70
2730 4005 5.581085 GCACGTAGAATGTATTTCTTGGACT 59.419 40.000 0.00 0.00 42.15 3.85
2732 4007 5.483811 TGCACGTAGAATGTATTTCTTGGA 58.516 37.500 0.00 0.00 42.15 3.53
2733 4008 5.351465 ACTGCACGTAGAATGTATTTCTTGG 59.649 40.000 0.00 0.00 42.15 3.61
2772 4047 9.843334 ATTATTTACGTAGCTCTAGCATTACTC 57.157 33.333 4.54 0.00 45.16 2.59
2775 4050 9.976511 ACAATTATTTACGTAGCTCTAGCATTA 57.023 29.630 4.54 0.00 45.16 1.90
2776 4051 8.888579 ACAATTATTTACGTAGCTCTAGCATT 57.111 30.769 4.54 0.00 45.16 3.56
2777 4052 9.408069 GTACAATTATTTACGTAGCTCTAGCAT 57.592 33.333 4.54 0.00 45.16 3.79
2778 4053 7.588854 CGTACAATTATTTACGTAGCTCTAGCA 59.411 37.037 4.54 0.00 38.88 3.49
2779 4054 7.926345 CGTACAATTATTTACGTAGCTCTAGC 58.074 38.462 0.00 0.00 37.02 3.42
2804 4079 4.034048 CACCTGCCTCATTACGTTAATCAC 59.966 45.833 0.00 0.00 0.00 3.06
2805 4080 4.188462 CACCTGCCTCATTACGTTAATCA 58.812 43.478 0.00 0.00 0.00 2.57
2806 4081 4.189231 ACACCTGCCTCATTACGTTAATC 58.811 43.478 0.00 0.00 0.00 1.75
2807 4082 4.216411 ACACCTGCCTCATTACGTTAAT 57.784 40.909 0.00 0.00 0.00 1.40
2808 4083 3.688694 ACACCTGCCTCATTACGTTAA 57.311 42.857 0.00 0.00 0.00 2.01
2809 4084 4.018490 TCTACACCTGCCTCATTACGTTA 58.982 43.478 0.00 0.00 0.00 3.18
2810 4085 2.829720 TCTACACCTGCCTCATTACGTT 59.170 45.455 0.00 0.00 0.00 3.99
2811 4086 2.453521 TCTACACCTGCCTCATTACGT 58.546 47.619 0.00 0.00 0.00 3.57
2812 4087 3.119101 ACTTCTACACCTGCCTCATTACG 60.119 47.826 0.00 0.00 0.00 3.18
2813 4088 4.473477 ACTTCTACACCTGCCTCATTAC 57.527 45.455 0.00 0.00 0.00 1.89
2814 4089 5.897250 TCATACTTCTACACCTGCCTCATTA 59.103 40.000 0.00 0.00 0.00 1.90
2815 4090 4.716784 TCATACTTCTACACCTGCCTCATT 59.283 41.667 0.00 0.00 0.00 2.57
2816 4091 4.290093 TCATACTTCTACACCTGCCTCAT 58.710 43.478 0.00 0.00 0.00 2.90
2817 4092 3.708451 TCATACTTCTACACCTGCCTCA 58.292 45.455 0.00 0.00 0.00 3.86
2818 4093 4.946478 ATCATACTTCTACACCTGCCTC 57.054 45.455 0.00 0.00 0.00 4.70
2819 4094 4.141620 CCAATCATACTTCTACACCTGCCT 60.142 45.833 0.00 0.00 0.00 4.75
2820 4095 4.130118 CCAATCATACTTCTACACCTGCC 58.870 47.826 0.00 0.00 0.00 4.85
2821 4096 5.023533 TCCAATCATACTTCTACACCTGC 57.976 43.478 0.00 0.00 0.00 4.85
2822 4097 6.471233 TCTCCAATCATACTTCTACACCTG 57.529 41.667 0.00 0.00 0.00 4.00
2823 4098 8.783660 TTATCTCCAATCATACTTCTACACCT 57.216 34.615 0.00 0.00 0.00 4.00
2824 4099 8.091449 CCTTATCTCCAATCATACTTCTACACC 58.909 40.741 0.00 0.00 0.00 4.16
2825 4100 8.091449 CCCTTATCTCCAATCATACTTCTACAC 58.909 40.741 0.00 0.00 0.00 2.90
2826 4101 7.235606 CCCCTTATCTCCAATCATACTTCTACA 59.764 40.741 0.00 0.00 0.00 2.74
2827 4102 7.455008 TCCCCTTATCTCCAATCATACTTCTAC 59.545 40.741 0.00 0.00 0.00 2.59
2828 4103 7.455008 GTCCCCTTATCTCCAATCATACTTCTA 59.545 40.741 0.00 0.00 0.00 2.10
2829 4104 6.271159 GTCCCCTTATCTCCAATCATACTTCT 59.729 42.308 0.00 0.00 0.00 2.85
2830 4105 6.043243 TGTCCCCTTATCTCCAATCATACTTC 59.957 42.308 0.00 0.00 0.00 3.01
2831 4106 5.911178 TGTCCCCTTATCTCCAATCATACTT 59.089 40.000 0.00 0.00 0.00 2.24
2832 4107 5.476983 TGTCCCCTTATCTCCAATCATACT 58.523 41.667 0.00 0.00 0.00 2.12
2833 4108 5.825593 TGTCCCCTTATCTCCAATCATAC 57.174 43.478 0.00 0.00 0.00 2.39
2834 4109 5.221641 CGTTGTCCCCTTATCTCCAATCATA 60.222 44.000 0.00 0.00 0.00 2.15
2835 4110 4.444876 CGTTGTCCCCTTATCTCCAATCAT 60.445 45.833 0.00 0.00 0.00 2.45
2836 4111 3.118408 CGTTGTCCCCTTATCTCCAATCA 60.118 47.826 0.00 0.00 0.00 2.57
2837 4112 3.467803 CGTTGTCCCCTTATCTCCAATC 58.532 50.000 0.00 0.00 0.00 2.67
2838 4113 2.172717 CCGTTGTCCCCTTATCTCCAAT 59.827 50.000 0.00 0.00 0.00 3.16
2839 4114 1.557832 CCGTTGTCCCCTTATCTCCAA 59.442 52.381 0.00 0.00 0.00 3.53
2840 4115 1.200519 CCGTTGTCCCCTTATCTCCA 58.799 55.000 0.00 0.00 0.00 3.86
2841 4116 0.468648 CCCGTTGTCCCCTTATCTCC 59.531 60.000 0.00 0.00 0.00 3.71
2842 4117 0.179054 GCCCGTTGTCCCCTTATCTC 60.179 60.000 0.00 0.00 0.00 2.75
2843 4118 1.632965 GGCCCGTTGTCCCCTTATCT 61.633 60.000 0.00 0.00 0.00 1.98
2844 4119 1.153025 GGCCCGTTGTCCCCTTATC 60.153 63.158 0.00 0.00 0.00 1.75
2845 4120 2.686572 GGGCCCGTTGTCCCCTTAT 61.687 63.158 5.69 0.00 36.50 1.73
2846 4121 3.332385 GGGCCCGTTGTCCCCTTA 61.332 66.667 5.69 0.00 36.50 2.69
2850 4125 4.717313 GAGTGGGCCCGTTGTCCC 62.717 72.222 19.37 0.00 42.93 4.46
2854 4129 4.096003 ATCCGAGTGGGCCCGTTG 62.096 66.667 19.37 10.93 35.24 4.10
2855 4130 4.096003 CATCCGAGTGGGCCCGTT 62.096 66.667 19.37 7.58 35.24 4.44
2857 4132 2.608970 ATTTCATCCGAGTGGGCCCG 62.609 60.000 19.37 4.43 35.24 6.13
2858 4133 0.819666 GATTTCATCCGAGTGGGCCC 60.820 60.000 17.59 17.59 35.24 5.80
2859 4134 0.107214 TGATTTCATCCGAGTGGGCC 60.107 55.000 0.00 0.00 35.24 5.80
2860 4135 1.303309 CTGATTTCATCCGAGTGGGC 58.697 55.000 0.00 0.00 35.24 5.36
2861 4136 1.486310 TCCTGATTTCATCCGAGTGGG 59.514 52.381 0.00 0.00 35.24 4.61
2862 4137 2.484417 CCTCCTGATTTCATCCGAGTGG 60.484 54.545 0.00 0.00 0.00 4.00
2863 4138 2.484417 CCCTCCTGATTTCATCCGAGTG 60.484 54.545 0.00 0.00 0.00 3.51
2864 4139 1.765314 CCCTCCTGATTTCATCCGAGT 59.235 52.381 0.00 0.00 0.00 4.18
2865 4140 2.036992 CTCCCTCCTGATTTCATCCGAG 59.963 54.545 0.00 0.00 0.00 4.63
2866 4141 2.042464 CTCCCTCCTGATTTCATCCGA 58.958 52.381 0.00 0.00 0.00 4.55
2867 4142 1.071385 CCTCCCTCCTGATTTCATCCG 59.929 57.143 0.00 0.00 0.00 4.18
2868 4143 1.423161 CCCTCCCTCCTGATTTCATCC 59.577 57.143 0.00 0.00 0.00 3.51
2869 4144 2.131023 ACCCTCCCTCCTGATTTCATC 58.869 52.381 0.00 0.00 0.00 2.92
2870 4145 1.849039 CACCCTCCCTCCTGATTTCAT 59.151 52.381 0.00 0.00 0.00 2.57
2871 4146 1.289160 CACCCTCCCTCCTGATTTCA 58.711 55.000 0.00 0.00 0.00 2.69
2872 4147 0.548510 CCACCCTCCCTCCTGATTTC 59.451 60.000 0.00 0.00 0.00 2.17
2873 4148 0.921256 CCCACCCTCCCTCCTGATTT 60.921 60.000 0.00 0.00 0.00 2.17
2874 4149 1.308216 CCCACCCTCCCTCCTGATT 60.308 63.158 0.00 0.00 0.00 2.57
2875 4150 2.374342 CCCACCCTCCCTCCTGAT 59.626 66.667 0.00 0.00 0.00 2.90
2876 4151 4.024984 CCCCACCCTCCCTCCTGA 62.025 72.222 0.00 0.00 0.00 3.86
2925 4200 8.306761 CCGAGTAAAGGTAGAGGTAAGTAAAAA 58.693 37.037 0.00 0.00 0.00 1.94
2926 4201 7.669722 TCCGAGTAAAGGTAGAGGTAAGTAAAA 59.330 37.037 0.00 0.00 0.00 1.52
2927 4202 7.175104 TCCGAGTAAAGGTAGAGGTAAGTAAA 58.825 38.462 0.00 0.00 0.00 2.01
2928 4203 6.721318 TCCGAGTAAAGGTAGAGGTAAGTAA 58.279 40.000 0.00 0.00 0.00 2.24
2929 4204 6.313519 TCCGAGTAAAGGTAGAGGTAAGTA 57.686 41.667 0.00 0.00 0.00 2.24
2930 4205 5.184892 TCCGAGTAAAGGTAGAGGTAAGT 57.815 43.478 0.00 0.00 0.00 2.24
2931 4206 6.521151 TTTCCGAGTAAAGGTAGAGGTAAG 57.479 41.667 0.00 0.00 0.00 2.34
2932 4207 7.486407 AATTTCCGAGTAAAGGTAGAGGTAA 57.514 36.000 0.00 0.00 0.00 2.85
2933 4208 7.486407 AAATTTCCGAGTAAAGGTAGAGGTA 57.514 36.000 0.00 0.00 0.00 3.08
2934 4209 6.370186 AAATTTCCGAGTAAAGGTAGAGGT 57.630 37.500 0.00 0.00 0.00 3.85
2935 4210 6.035758 CGAAAATTTCCGAGTAAAGGTAGAGG 59.964 42.308 0.00 0.00 0.00 3.69
2936 4211 6.810182 TCGAAAATTTCCGAGTAAAGGTAGAG 59.190 38.462 0.00 0.00 0.00 2.43
2937 4212 6.690530 TCGAAAATTTCCGAGTAAAGGTAGA 58.309 36.000 0.00 0.00 0.00 2.59
2938 4213 6.956299 TCGAAAATTTCCGAGTAAAGGTAG 57.044 37.500 0.00 0.00 0.00 3.18
2939 4214 7.098477 TCATCGAAAATTTCCGAGTAAAGGTA 58.902 34.615 5.57 0.00 38.25 3.08
2940 4215 5.935789 TCATCGAAAATTTCCGAGTAAAGGT 59.064 36.000 5.57 0.00 38.25 3.50
2941 4216 6.417191 TCATCGAAAATTTCCGAGTAAAGG 57.583 37.500 5.57 0.00 38.25 3.11
2942 4217 8.227791 TCTTTCATCGAAAATTTCCGAGTAAAG 58.772 33.333 20.83 20.83 39.34 1.85
2943 4218 8.090250 TCTTTCATCGAAAATTTCCGAGTAAA 57.910 30.769 5.57 7.30 38.25 2.01
2944 4219 7.661127 TCTTTCATCGAAAATTTCCGAGTAA 57.339 32.000 5.57 0.00 38.25 2.24
2945 4220 7.843490 ATCTTTCATCGAAAATTTCCGAGTA 57.157 32.000 5.57 0.00 38.25 2.59
2946 4221 6.743575 ATCTTTCATCGAAAATTTCCGAGT 57.256 33.333 5.57 0.00 38.25 4.18
2947 4222 8.368126 CAAAATCTTTCATCGAAAATTTCCGAG 58.632 33.333 5.57 0.00 38.25 4.63
2948 4223 7.865385 ACAAAATCTTTCATCGAAAATTTCCGA 59.135 29.630 0.85 0.85 39.25 4.55
2949 4224 8.006741 ACAAAATCTTTCATCGAAAATTTCCG 57.993 30.769 0.00 0.00 30.84 4.30
2970 4245 8.887717 CCAACAAAACCATCAAAGAATTACAAA 58.112 29.630 0.00 0.00 0.00 2.83
2971 4246 8.260818 TCCAACAAAACCATCAAAGAATTACAA 58.739 29.630 0.00 0.00 0.00 2.41
2972 4247 7.786030 TCCAACAAAACCATCAAAGAATTACA 58.214 30.769 0.00 0.00 0.00 2.41
2973 4248 8.831715 ATCCAACAAAACCATCAAAGAATTAC 57.168 30.769 0.00 0.00 0.00 1.89
2974 4249 9.844257 AAATCCAACAAAACCATCAAAGAATTA 57.156 25.926 0.00 0.00 0.00 1.40
2975 4250 8.750515 AAATCCAACAAAACCATCAAAGAATT 57.249 26.923 0.00 0.00 0.00 2.17
2976 4251 7.992033 TGAAATCCAACAAAACCATCAAAGAAT 59.008 29.630 0.00 0.00 0.00 2.40
2977 4252 7.334090 TGAAATCCAACAAAACCATCAAAGAA 58.666 30.769 0.00 0.00 0.00 2.52
2978 4253 6.882656 TGAAATCCAACAAAACCATCAAAGA 58.117 32.000 0.00 0.00 0.00 2.52
2979 4254 7.733402 ATGAAATCCAACAAAACCATCAAAG 57.267 32.000 0.00 0.00 0.00 2.77
2980 4255 7.727331 GATGAAATCCAACAAAACCATCAAA 57.273 32.000 0.00 0.00 37.38 2.69
2996 4271 6.638468 GGGCATTAATCAACGAAGATGAAATC 59.362 38.462 0.00 0.00 43.92 2.17
2997 4272 6.461509 GGGGCATTAATCAACGAAGATGAAAT 60.462 38.462 0.00 0.00 43.92 2.17
2998 4273 5.163561 GGGGCATTAATCAACGAAGATGAAA 60.164 40.000 0.00 0.00 43.92 2.69
2999 4274 4.338118 GGGGCATTAATCAACGAAGATGAA 59.662 41.667 0.00 0.00 43.92 2.57
3000 4275 3.882888 GGGGCATTAATCAACGAAGATGA 59.117 43.478 0.00 0.00 45.05 2.92
3001 4276 3.631686 TGGGGCATTAATCAACGAAGATG 59.368 43.478 0.00 0.00 0.00 2.90
3002 4277 3.897239 TGGGGCATTAATCAACGAAGAT 58.103 40.909 0.00 0.00 0.00 2.40
3003 4278 3.358111 TGGGGCATTAATCAACGAAGA 57.642 42.857 0.00 0.00 0.00 2.87
3004 4279 3.303990 CGATGGGGCATTAATCAACGAAG 60.304 47.826 0.00 0.00 0.00 3.79
3005 4280 2.616376 CGATGGGGCATTAATCAACGAA 59.384 45.455 0.00 0.00 0.00 3.85
3006 4281 2.158885 TCGATGGGGCATTAATCAACGA 60.159 45.455 3.98 3.98 33.38 3.85
3007 4282 2.217750 TCGATGGGGCATTAATCAACG 58.782 47.619 0.00 0.00 0.00 4.10
3008 4283 4.142600 GCTATCGATGGGGCATTAATCAAC 60.143 45.833 8.54 0.00 0.00 3.18
3009 4284 4.009675 GCTATCGATGGGGCATTAATCAA 58.990 43.478 8.54 0.00 0.00 2.57
3010 4285 3.008923 TGCTATCGATGGGGCATTAATCA 59.991 43.478 8.54 0.00 0.00 2.57
3011 4286 3.609853 TGCTATCGATGGGGCATTAATC 58.390 45.455 8.54 0.00 0.00 1.75
3012 4287 3.719268 TGCTATCGATGGGGCATTAAT 57.281 42.857 8.54 0.00 0.00 1.40
3013 4288 3.181445 ACTTGCTATCGATGGGGCATTAA 60.181 43.478 18.23 7.53 34.59 1.40
3014 4289 2.371841 ACTTGCTATCGATGGGGCATTA 59.628 45.455 18.23 8.05 34.59 1.90
3015 4290 1.143684 ACTTGCTATCGATGGGGCATT 59.856 47.619 18.23 9.54 34.59 3.56
3016 4291 0.767375 ACTTGCTATCGATGGGGCAT 59.233 50.000 18.23 6.71 34.59 4.40
3017 4292 0.546122 AACTTGCTATCGATGGGGCA 59.454 50.000 8.54 12.71 0.00 5.36
3018 4293 2.543777 TAACTTGCTATCGATGGGGC 57.456 50.000 8.54 10.22 0.00 5.80
3019 4294 4.275936 CCTTTTAACTTGCTATCGATGGGG 59.724 45.833 8.54 0.00 0.00 4.96
3020 4295 4.275936 CCCTTTTAACTTGCTATCGATGGG 59.724 45.833 8.54 0.89 0.00 4.00
3021 4296 4.275936 CCCCTTTTAACTTGCTATCGATGG 59.724 45.833 8.54 6.23 0.00 3.51
3022 4297 4.261197 GCCCCTTTTAACTTGCTATCGATG 60.261 45.833 8.54 0.00 0.00 3.84
3023 4298 3.883489 GCCCCTTTTAACTTGCTATCGAT 59.117 43.478 2.16 2.16 0.00 3.59
3024 4299 3.054655 AGCCCCTTTTAACTTGCTATCGA 60.055 43.478 0.00 0.00 0.00 3.59
3025 4300 3.279434 AGCCCCTTTTAACTTGCTATCG 58.721 45.455 0.00 0.00 0.00 2.92
3026 4301 6.546034 TGATTAGCCCCTTTTAACTTGCTATC 59.454 38.462 0.00 0.00 31.99 2.08
3027 4302 6.431722 TGATTAGCCCCTTTTAACTTGCTAT 58.568 36.000 0.00 0.00 31.99 2.97
3028 4303 5.822204 TGATTAGCCCCTTTTAACTTGCTA 58.178 37.500 0.00 0.00 0.00 3.49
3029 4304 4.672899 TGATTAGCCCCTTTTAACTTGCT 58.327 39.130 0.00 0.00 0.00 3.91
3030 4305 4.142160 CCTGATTAGCCCCTTTTAACTTGC 60.142 45.833 0.00 0.00 0.00 4.01
3031 4306 4.142160 GCCTGATTAGCCCCTTTTAACTTG 60.142 45.833 0.00 0.00 0.00 3.16
3032 4307 4.023980 GCCTGATTAGCCCCTTTTAACTT 58.976 43.478 0.00 0.00 0.00 2.66
3033 4308 3.011257 TGCCTGATTAGCCCCTTTTAACT 59.989 43.478 0.00 0.00 0.00 2.24
3034 4309 3.361786 TGCCTGATTAGCCCCTTTTAAC 58.638 45.455 0.00 0.00 0.00 2.01
3035 4310 3.748645 TGCCTGATTAGCCCCTTTTAA 57.251 42.857 0.00 0.00 0.00 1.52
3036 4311 3.971468 ATGCCTGATTAGCCCCTTTTA 57.029 42.857 0.00 0.00 0.00 1.52
3037 4312 2.854736 ATGCCTGATTAGCCCCTTTT 57.145 45.000 0.00 0.00 0.00 2.27
3038 4313 2.785857 ACTATGCCTGATTAGCCCCTTT 59.214 45.455 0.00 0.00 0.00 3.11
3039 4314 2.422746 ACTATGCCTGATTAGCCCCTT 58.577 47.619 0.00 0.00 0.00 3.95
3040 4315 2.124560 ACTATGCCTGATTAGCCCCT 57.875 50.000 0.00 0.00 0.00 4.79
3041 4316 2.106511 TGAACTATGCCTGATTAGCCCC 59.893 50.000 0.00 0.00 0.00 5.80
3042 4317 3.492102 TGAACTATGCCTGATTAGCCC 57.508 47.619 0.00 0.00 0.00 5.19
3043 4318 6.264067 AGAAAATGAACTATGCCTGATTAGCC 59.736 38.462 0.00 0.00 0.00 3.93
3044 4319 7.137426 CAGAAAATGAACTATGCCTGATTAGC 58.863 38.462 0.00 0.00 0.00 3.09
3045 4320 7.137426 GCAGAAAATGAACTATGCCTGATTAG 58.863 38.462 0.00 0.00 0.00 1.73
3046 4321 7.031226 GCAGAAAATGAACTATGCCTGATTA 57.969 36.000 0.00 0.00 0.00 1.75
3047 4322 5.899299 GCAGAAAATGAACTATGCCTGATT 58.101 37.500 0.00 0.00 0.00 2.57
3048 4323 5.511234 GCAGAAAATGAACTATGCCTGAT 57.489 39.130 0.00 0.00 0.00 2.90
3049 4324 4.970662 GCAGAAAATGAACTATGCCTGA 57.029 40.909 0.00 0.00 0.00 3.86
3053 4328 6.973229 AATTTGGCAGAAAATGAACTATGC 57.027 33.333 0.00 0.00 30.21 3.14
3054 4329 9.601971 CAAAAATTTGGCAGAAAATGAACTATG 57.398 29.630 0.00 0.00 34.59 2.23
3055 4330 9.341078 ACAAAAATTTGGCAGAAAATGAACTAT 57.659 25.926 10.38 0.00 42.34 2.12
3056 4331 8.729805 ACAAAAATTTGGCAGAAAATGAACTA 57.270 26.923 10.38 0.00 42.34 2.24
3057 4332 7.465781 CGACAAAAATTTGGCAGAAAATGAACT 60.466 33.333 11.96 0.00 46.58 3.01
3058 4333 6.628461 CGACAAAAATTTGGCAGAAAATGAAC 59.372 34.615 11.96 0.00 46.58 3.18
3059 4334 6.238320 CCGACAAAAATTTGGCAGAAAATGAA 60.238 34.615 11.96 0.00 46.58 2.57
3060 4335 5.236047 CCGACAAAAATTTGGCAGAAAATGA 59.764 36.000 11.96 0.00 46.58 2.57
3061 4336 5.442402 CCGACAAAAATTTGGCAGAAAATG 58.558 37.500 11.96 0.00 46.58 2.32
3062 4337 4.024133 GCCGACAAAAATTTGGCAGAAAAT 60.024 37.500 11.96 0.00 46.58 1.82
3063 4338 3.311048 GCCGACAAAAATTTGGCAGAAAA 59.689 39.130 11.96 0.00 46.58 2.29
3064 4339 2.869192 GCCGACAAAAATTTGGCAGAAA 59.131 40.909 11.96 0.00 46.58 2.52
3065 4340 2.478831 GCCGACAAAAATTTGGCAGAA 58.521 42.857 11.96 0.00 46.58 3.02
3066 4341 1.270041 GGCCGACAAAAATTTGGCAGA 60.270 47.619 15.92 0.00 46.58 4.26
3067 4342 1.147473 GGCCGACAAAAATTTGGCAG 58.853 50.000 15.92 1.75 46.58 4.85
3068 4343 0.598680 CGGCCGACAAAAATTTGGCA 60.599 50.000 24.07 0.00 46.58 4.92
3069 4344 1.288419 CCGGCCGACAAAAATTTGGC 61.288 55.000 30.73 7.74 42.79 4.52
3070 4345 0.032815 ACCGGCCGACAAAAATTTGG 59.967 50.000 30.73 7.48 42.34 3.28
3071 4346 1.524776 CAACCGGCCGACAAAAATTTG 59.475 47.619 30.73 8.09 43.62 2.32
3072 4347 1.539280 CCAACCGGCCGACAAAAATTT 60.539 47.619 30.73 3.04 0.00 1.82
3073 4348 0.032815 CCAACCGGCCGACAAAAATT 59.967 50.000 30.73 5.91 0.00 1.82
3074 4349 1.110518 ACCAACCGGCCGACAAAAAT 61.111 50.000 30.73 2.10 34.57 1.82
3075 4350 1.321074 AACCAACCGGCCGACAAAAA 61.321 50.000 30.73 0.00 34.57 1.94
3076 4351 0.465097 TAACCAACCGGCCGACAAAA 60.465 50.000 30.73 2.16 34.57 2.44
3077 4352 0.465097 TTAACCAACCGGCCGACAAA 60.465 50.000 30.73 7.82 34.57 2.83
3078 4353 0.465097 TTTAACCAACCGGCCGACAA 60.465 50.000 30.73 6.30 34.57 3.18
3079 4354 0.250814 ATTTAACCAACCGGCCGACA 60.251 50.000 30.73 0.00 34.57 4.35
3080 4355 0.883153 AATTTAACCAACCGGCCGAC 59.117 50.000 30.73 0.00 34.57 4.79
3081 4356 1.618487 AAATTTAACCAACCGGCCGA 58.382 45.000 30.73 2.43 34.57 5.54
3082 4357 2.442212 AAAATTTAACCAACCGGCCG 57.558 45.000 21.04 21.04 34.57 6.13
3083 4358 2.224549 GCAAAAATTTAACCAACCGGCC 59.775 45.455 0.00 0.00 34.57 6.13
3084 4359 2.224549 GGCAAAAATTTAACCAACCGGC 59.775 45.455 0.00 0.00 34.57 6.13
3085 4360 2.809119 GGGCAAAAATTTAACCAACCGG 59.191 45.455 0.00 0.00 38.77 5.28
3086 4361 2.809119 GGGGCAAAAATTTAACCAACCG 59.191 45.455 0.00 0.00 0.00 4.44
3087 4362 3.150767 GGGGGCAAAAATTTAACCAACC 58.849 45.455 0.00 0.00 0.00 3.77
3107 4382 1.446366 GGCTAGCTACTTTCGGGGG 59.554 63.158 15.72 0.00 0.00 5.40
3108 4383 1.446366 GGGCTAGCTACTTTCGGGG 59.554 63.158 15.72 0.00 0.00 5.73
3109 4384 1.446366 GGGGCTAGCTACTTTCGGG 59.554 63.158 15.72 0.00 0.00 5.14
3110 4385 1.446366 GGGGGCTAGCTACTTTCGG 59.554 63.158 15.72 0.00 0.00 4.30
3148 4423 3.356212 CCCCCTCCCTTTTCCCCC 61.356 72.222 0.00 0.00 0.00 5.40
3149 4424 2.204401 TCCCCCTCCCTTTTCCCC 60.204 66.667 0.00 0.00 0.00 4.81
3150 4425 1.221909 ATGTCCCCCTCCCTTTTCCC 61.222 60.000 0.00 0.00 0.00 3.97
3151 4426 1.603634 TATGTCCCCCTCCCTTTTCC 58.396 55.000 0.00 0.00 0.00 3.13
3152 4427 3.362706 GTTTATGTCCCCCTCCCTTTTC 58.637 50.000 0.00 0.00 0.00 2.29
3153 4428 2.043939 GGTTTATGTCCCCCTCCCTTTT 59.956 50.000 0.00 0.00 0.00 2.27
3154 4429 1.644337 GGTTTATGTCCCCCTCCCTTT 59.356 52.381 0.00 0.00 0.00 3.11
3155 4430 1.305886 GGTTTATGTCCCCCTCCCTT 58.694 55.000 0.00 0.00 0.00 3.95
3156 4431 0.626574 GGGTTTATGTCCCCCTCCCT 60.627 60.000 0.00 0.00 39.08 4.20
3157 4432 1.928199 GGGTTTATGTCCCCCTCCC 59.072 63.158 0.00 0.00 39.08 4.30
3174 4449 6.709018 ATTTCGTCATACTTAATTTGGGGG 57.291 37.500 0.00 0.00 0.00 5.40
3175 4450 8.996024 AAAATTTCGTCATACTTAATTTGGGG 57.004 30.769 0.00 0.00 31.06 4.96
3222 4497 0.398664 TGCTCTTAGGTAGCTCCCCC 60.399 60.000 0.00 0.00 40.73 5.40
3223 4498 3.225608 TGCTCTTAGGTAGCTCCCC 57.774 57.895 0.00 0.00 40.73 4.81


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.