Multiple sequence alignment - TraesCS3B01G007200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G007200 chr3B 100.000 3869 0 0 1 3869 3668325 3664457 0.000000e+00 7145.0
1 TraesCS3B01G007200 chr3B 98.079 3020 27 14 864 3869 5168896 5171898 0.000000e+00 5227.0
2 TraesCS3B01G007200 chr3B 87.628 1269 91 27 946 2162 3407152 3408406 0.000000e+00 1413.0
3 TraesCS3B01G007200 chr3B 93.690 523 27 6 946 1466 5323689 5323171 0.000000e+00 778.0
4 TraesCS3B01G007200 chr3B 90.566 212 19 1 1951 2162 5322654 5322444 2.940000e-71 279.0
5 TraesCS3B01G007200 chr3B 83.475 236 23 14 2460 2686 3408608 3408836 5.070000e-49 206.0
6 TraesCS3B01G007200 chr3B 89.404 151 12 3 2540 2690 5322165 5322019 1.840000e-43 187.0
7 TraesCS3B01G007200 chr3B 84.091 132 15 5 2560 2690 3625833 3625959 5.250000e-24 122.0
8 TraesCS3B01G007200 chr3A 85.953 1979 127 62 1951 3869 7475902 7474015 0.000000e+00 1975.0
9 TraesCS3B01G007200 chr3A 90.685 569 33 15 946 1505 7476949 7476392 0.000000e+00 739.0
10 TraesCS3B01G007200 chr3D 88.960 1096 92 19 1951 3028 1639663 1638579 0.000000e+00 1327.0
11 TraesCS3B01G007200 chr3D 87.340 1169 78 15 1081 2206 1337587 1338728 0.000000e+00 1275.0
12 TraesCS3B01G007200 chr3D 97.638 381 8 1 1081 1460 1640593 1640213 0.000000e+00 652.0
13 TraesCS3B01G007200 chr3D 83.482 672 64 11 1504 2156 1591414 1592057 2.000000e-162 582.0
14 TraesCS3B01G007200 chr3D 83.921 454 65 6 1951 2402 546541256 546541703 9.930000e-116 427.0
15 TraesCS3B01G007200 chr3D 83.539 243 28 10 2453 2690 1339074 1339309 2.340000e-52 217.0
16 TraesCS3B01G007200 chr4A 96.834 379 12 0 1074 1452 732517271 732516893 5.450000e-178 634.0
17 TraesCS3B01G007200 chr7A 97.043 372 11 0 1081 1452 8262588 8262217 9.130000e-176 627.0
18 TraesCS3B01G007200 chr7D 96.237 372 14 0 1081 1452 7302268 7301897 9.190000e-171 610.0
19 TraesCS3B01G007200 chr7D 93.333 90 6 0 2543 2632 7300734 7300645 2.430000e-27 134.0
20 TraesCS3B01G007200 chr7D 77.523 218 42 5 404 618 607124246 607124459 1.460000e-24 124.0
21 TraesCS3B01G007200 chr2B 84.581 454 62 5 1951 2402 727307601 727308048 9.860000e-121 444.0
22 TraesCS3B01G007200 chr6B 83.700 454 66 5 1951 2402 94240319 94239872 4.620000e-114 422.0
23 TraesCS3B01G007200 chr6B 93.333 90 6 0 2543 2632 265677438 265677349 2.430000e-27 134.0
24 TraesCS3B01G007200 chr6B 76.536 179 35 6 438 615 555851410 555851582 1.480000e-14 91.6
25 TraesCS3B01G007200 chr2D 83.700 454 66 5 1951 2402 56853232 56853679 4.620000e-114 422.0
26 TraesCS3B01G007200 chr2D 83.196 363 54 5 1951 2312 547752679 547752323 3.730000e-85 326.0
27 TraesCS3B01G007200 chr2D 80.117 171 28 5 449 618 129791654 129791489 5.250000e-24 122.0
28 TraesCS3B01G007200 chr1A 80.537 149 27 2 446 594 587356822 587356968 3.160000e-21 113.0
29 TraesCS3B01G007200 chr5D 79.699 133 26 1 495 627 490020069 490019938 1.140000e-15 95.3
30 TraesCS3B01G007200 chr4B 75.113 221 45 8 410 627 529917483 529917270 1.140000e-15 95.3
31 TraesCS3B01G007200 chr1D 81.720 93 15 2 545 637 14785143 14785053 4.150000e-10 76.8
32 TraesCS3B01G007200 chr1D 80.645 93 16 2 545 637 14859589 14859499 1.930000e-08 71.3
33 TraesCS3B01G007200 chr6D 81.319 91 16 1 524 614 16866258 16866169 5.360000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G007200 chr3B 3664457 3668325 3868 True 7145.000000 7145 100.0000 1 3869 1 chr3B.!!$R1 3868
1 TraesCS3B01G007200 chr3B 5168896 5171898 3002 False 5227.000000 5227 98.0790 864 3869 1 chr3B.!!$F2 3005
2 TraesCS3B01G007200 chr3B 3407152 3408836 1684 False 809.500000 1413 85.5515 946 2686 2 chr3B.!!$F3 1740
3 TraesCS3B01G007200 chr3B 5322019 5323689 1670 True 414.666667 778 91.2200 946 2690 3 chr3B.!!$R2 1744
4 TraesCS3B01G007200 chr3A 7474015 7476949 2934 True 1357.000000 1975 88.3190 946 3869 2 chr3A.!!$R1 2923
5 TraesCS3B01G007200 chr3D 1638579 1640593 2014 True 989.500000 1327 93.2990 1081 3028 2 chr3D.!!$R1 1947
6 TraesCS3B01G007200 chr3D 1337587 1339309 1722 False 746.000000 1275 85.4395 1081 2690 2 chr3D.!!$F3 1609
7 TraesCS3B01G007200 chr3D 1591414 1592057 643 False 582.000000 582 83.4820 1504 2156 1 chr3D.!!$F1 652
8 TraesCS3B01G007200 chr7D 7300645 7302268 1623 True 372.000000 610 94.7850 1081 2632 2 chr7D.!!$R1 1551

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
490 491 0.029567 GCACCTCGTAGTCGATGGAG 59.97 60.0 0.0 0.0 45.21 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2948 4094 4.501571 CCACCAACCTACAGATTATCCTCG 60.502 50.0 0.0 0.0 0.0 4.63 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
85 86 8.425577 TTTTTGAAGCAACGGATATTTTTGAA 57.574 26.923 0.00 0.00 0.00 2.69
86 87 8.600449 TTTTGAAGCAACGGATATTTTTGAAT 57.400 26.923 0.00 0.00 0.00 2.57
87 88 7.810766 TTGAAGCAACGGATATTTTTGAATC 57.189 32.000 0.00 0.00 0.00 2.52
88 89 6.918626 TGAAGCAACGGATATTTTTGAATCA 58.081 32.000 0.00 0.00 0.00 2.57
89 90 7.374272 TGAAGCAACGGATATTTTTGAATCAA 58.626 30.769 0.00 0.00 0.00 2.57
90 91 8.034215 TGAAGCAACGGATATTTTTGAATCAAT 58.966 29.630 0.00 0.00 0.00 2.57
91 92 7.760131 AGCAACGGATATTTTTGAATCAATG 57.240 32.000 0.00 0.00 0.00 2.82
92 93 7.546358 AGCAACGGATATTTTTGAATCAATGA 58.454 30.769 0.00 0.00 0.00 2.57
93 94 8.034215 AGCAACGGATATTTTTGAATCAATGAA 58.966 29.630 0.00 0.00 0.00 2.57
94 95 8.110002 GCAACGGATATTTTTGAATCAATGAAC 58.890 33.333 0.00 0.00 0.00 3.18
95 96 9.357652 CAACGGATATTTTTGAATCAATGAACT 57.642 29.630 0.00 0.00 0.00 3.01
96 97 9.927668 AACGGATATTTTTGAATCAATGAACTT 57.072 25.926 0.00 0.00 0.00 2.66
97 98 9.927668 ACGGATATTTTTGAATCAATGAACTTT 57.072 25.926 0.00 0.00 0.00 2.66
109 110 9.667989 GAATCAATGAACTTTTTGAAATTTGGG 57.332 29.630 0.00 0.00 35.63 4.12
110 111 8.977267 ATCAATGAACTTTTTGAAATTTGGGA 57.023 26.923 0.00 0.00 35.63 4.37
111 112 8.798859 TCAATGAACTTTTTGAAATTTGGGAA 57.201 26.923 0.00 0.00 0.00 3.97
112 113 8.672815 TCAATGAACTTTTTGAAATTTGGGAAC 58.327 29.630 0.00 0.00 0.00 3.62
113 114 8.676401 CAATGAACTTTTTGAAATTTGGGAACT 58.324 29.630 0.00 0.00 0.00 3.01
114 115 9.898152 AATGAACTTTTTGAAATTTGGGAACTA 57.102 25.926 0.00 0.00 0.00 2.24
116 117 9.898152 TGAACTTTTTGAAATTTGGGAACTATT 57.102 25.926 0.00 0.00 0.00 1.73
129 130 8.964476 TTTGGGAACTATTAACAAAAATTGCA 57.036 26.923 0.00 0.00 0.00 4.08
130 131 9.566432 TTTGGGAACTATTAACAAAAATTGCAT 57.434 25.926 0.00 0.00 0.00 3.96
131 132 9.566432 TTGGGAACTATTAACAAAAATTGCATT 57.434 25.926 0.00 0.00 0.00 3.56
132 133 9.566432 TGGGAACTATTAACAAAAATTGCATTT 57.434 25.926 0.00 0.00 0.00 2.32
133 134 9.824534 GGGAACTATTAACAAAAATTGCATTTG 57.175 29.630 9.23 9.23 42.18 2.32
142 143 6.889019 CAAAAATTGCATTTGTTTTTGCCT 57.111 29.167 18.35 0.00 42.35 4.75
143 144 7.292129 CAAAAATTGCATTTGTTTTTGCCTT 57.708 28.000 18.35 0.00 42.35 4.35
144 145 7.740246 CAAAAATTGCATTTGTTTTTGCCTTT 58.260 26.923 18.35 3.10 42.35 3.11
145 146 7.902387 AAAATTGCATTTGTTTTTGCCTTTT 57.098 24.000 0.00 0.00 38.08 2.27
146 147 7.902387 AAATTGCATTTGTTTTTGCCTTTTT 57.098 24.000 0.00 0.00 38.08 1.94
147 148 6.889019 ATTGCATTTGTTTTTGCCTTTTTG 57.111 29.167 0.00 0.00 38.08 2.44
148 149 4.741342 TGCATTTGTTTTTGCCTTTTTGG 58.259 34.783 0.00 0.00 38.08 3.28
149 150 4.460382 TGCATTTGTTTTTGCCTTTTTGGA 59.540 33.333 0.00 0.00 38.08 3.53
150 151 4.797868 GCATTTGTTTTTGCCTTTTTGGAC 59.202 37.500 0.00 0.00 38.35 4.02
151 152 5.620879 GCATTTGTTTTTGCCTTTTTGGACA 60.621 36.000 0.00 0.00 38.35 4.02
152 153 6.562518 CATTTGTTTTTGCCTTTTTGGACAT 58.437 32.000 0.00 0.00 38.35 3.06
153 154 6.581171 TTTGTTTTTGCCTTTTTGGACATT 57.419 29.167 0.00 0.00 38.35 2.71
154 155 6.581171 TTGTTTTTGCCTTTTTGGACATTT 57.419 29.167 0.00 0.00 38.35 2.32
155 156 6.581171 TGTTTTTGCCTTTTTGGACATTTT 57.419 29.167 0.00 0.00 38.35 1.82
156 157 6.986250 TGTTTTTGCCTTTTTGGACATTTTT 58.014 28.000 0.00 0.00 38.35 1.94
157 158 8.110860 TGTTTTTGCCTTTTTGGACATTTTTA 57.889 26.923 0.00 0.00 38.35 1.52
158 159 8.576442 TGTTTTTGCCTTTTTGGACATTTTTAA 58.424 25.926 0.00 0.00 38.35 1.52
159 160 9.411801 GTTTTTGCCTTTTTGGACATTTTTAAA 57.588 25.926 0.00 0.00 38.35 1.52
161 162 9.578439 TTTTGCCTTTTTGGACATTTTTAAATG 57.422 25.926 12.41 12.41 42.70 2.32
182 183 5.905480 TGTTCATGGACATTATTCGATCG 57.095 39.130 9.36 9.36 0.00 3.69
183 184 4.749598 TGTTCATGGACATTATTCGATCGG 59.250 41.667 16.41 0.00 0.00 4.18
184 185 4.600692 TCATGGACATTATTCGATCGGT 57.399 40.909 16.41 3.44 0.00 4.69
185 186 4.306600 TCATGGACATTATTCGATCGGTG 58.693 43.478 16.41 9.17 0.00 4.94
186 187 3.812156 TGGACATTATTCGATCGGTGT 57.188 42.857 16.41 12.16 0.00 4.16
187 188 4.922471 TGGACATTATTCGATCGGTGTA 57.078 40.909 16.41 3.18 0.00 2.90
188 189 5.462530 TGGACATTATTCGATCGGTGTAT 57.537 39.130 16.41 6.71 0.00 2.29
189 190 5.849510 TGGACATTATTCGATCGGTGTATT 58.150 37.500 16.41 0.32 0.00 1.89
190 191 5.924254 TGGACATTATTCGATCGGTGTATTC 59.076 40.000 16.41 4.28 0.00 1.75
191 192 6.157211 GGACATTATTCGATCGGTGTATTCT 58.843 40.000 16.41 0.00 0.00 2.40
192 193 6.645415 GGACATTATTCGATCGGTGTATTCTT 59.355 38.462 16.41 0.00 0.00 2.52
193 194 7.170998 GGACATTATTCGATCGGTGTATTCTTT 59.829 37.037 16.41 0.00 0.00 2.52
194 195 8.073355 ACATTATTCGATCGGTGTATTCTTTC 57.927 34.615 16.41 0.00 0.00 2.62
195 196 7.709182 ACATTATTCGATCGGTGTATTCTTTCA 59.291 33.333 16.41 0.00 0.00 2.69
196 197 8.547894 CATTATTCGATCGGTGTATTCTTTCAA 58.452 33.333 16.41 0.00 0.00 2.69
197 198 6.978343 ATTCGATCGGTGTATTCTTTCAAA 57.022 33.333 16.41 0.00 0.00 2.69
198 199 6.978343 TTCGATCGGTGTATTCTTTCAAAT 57.022 33.333 16.41 0.00 0.00 2.32
199 200 6.978343 TCGATCGGTGTATTCTTTCAAATT 57.022 33.333 16.41 0.00 0.00 1.82
200 201 7.000575 TCGATCGGTGTATTCTTTCAAATTC 57.999 36.000 16.41 0.00 0.00 2.17
201 202 6.592220 TCGATCGGTGTATTCTTTCAAATTCA 59.408 34.615 16.41 0.00 0.00 2.57
202 203 7.279981 TCGATCGGTGTATTCTTTCAAATTCAT 59.720 33.333 16.41 0.00 0.00 2.57
203 204 7.374228 CGATCGGTGTATTCTTTCAAATTCATG 59.626 37.037 7.38 0.00 0.00 3.07
204 205 7.680442 TCGGTGTATTCTTTCAAATTCATGA 57.320 32.000 0.00 0.00 0.00 3.07
205 206 8.279970 TCGGTGTATTCTTTCAAATTCATGAT 57.720 30.769 0.00 0.00 0.00 2.45
206 207 8.739039 TCGGTGTATTCTTTCAAATTCATGATT 58.261 29.630 0.00 0.00 0.00 2.57
207 208 9.357652 CGGTGTATTCTTTCAAATTCATGATTT 57.642 29.630 0.00 0.00 38.49 2.17
286 287 6.906157 AATTCAAGATGTGATGTTGGTTCT 57.094 33.333 0.00 0.00 35.70 3.01
287 288 5.947228 TTCAAGATGTGATGTTGGTTCTC 57.053 39.130 0.00 0.00 35.70 2.87
288 289 3.996363 TCAAGATGTGATGTTGGTTCTCG 59.004 43.478 0.00 0.00 34.59 4.04
289 290 2.350522 AGATGTGATGTTGGTTCTCGC 58.649 47.619 0.00 0.00 0.00 5.03
290 291 2.027745 AGATGTGATGTTGGTTCTCGCT 60.028 45.455 0.00 0.00 0.00 4.93
291 292 2.254546 TGTGATGTTGGTTCTCGCTT 57.745 45.000 0.00 0.00 0.00 4.68
292 293 1.872952 TGTGATGTTGGTTCTCGCTTG 59.127 47.619 0.00 0.00 0.00 4.01
293 294 1.873591 GTGATGTTGGTTCTCGCTTGT 59.126 47.619 0.00 0.00 0.00 3.16
294 295 3.064207 GTGATGTTGGTTCTCGCTTGTA 58.936 45.455 0.00 0.00 0.00 2.41
295 296 3.684788 GTGATGTTGGTTCTCGCTTGTAT 59.315 43.478 0.00 0.00 0.00 2.29
296 297 4.154195 GTGATGTTGGTTCTCGCTTGTATT 59.846 41.667 0.00 0.00 0.00 1.89
297 298 4.759693 TGATGTTGGTTCTCGCTTGTATTT 59.240 37.500 0.00 0.00 0.00 1.40
298 299 5.240623 TGATGTTGGTTCTCGCTTGTATTTT 59.759 36.000 0.00 0.00 0.00 1.82
299 300 6.428465 TGATGTTGGTTCTCGCTTGTATTTTA 59.572 34.615 0.00 0.00 0.00 1.52
300 301 6.621316 TGTTGGTTCTCGCTTGTATTTTAA 57.379 33.333 0.00 0.00 0.00 1.52
301 302 7.028926 TGTTGGTTCTCGCTTGTATTTTAAA 57.971 32.000 0.00 0.00 0.00 1.52
302 303 7.653647 TGTTGGTTCTCGCTTGTATTTTAAAT 58.346 30.769 0.00 0.00 0.00 1.40
303 304 8.138712 TGTTGGTTCTCGCTTGTATTTTAAATT 58.861 29.630 0.00 0.00 0.00 1.82
304 305 8.974408 GTTGGTTCTCGCTTGTATTTTAAATTT 58.026 29.630 0.00 0.00 0.00 1.82
343 344 9.502091 AGATACACATTGTAGTTTTTCTTAGCA 57.498 29.630 0.00 0.00 36.14 3.49
347 348 9.284968 ACACATTGTAGTTTTTCTTAGCATAGT 57.715 29.630 0.00 0.00 0.00 2.12
358 359 9.950680 TTTTTCTTAGCATAGTATAATTGCAGC 57.049 29.630 9.05 0.00 38.84 5.25
359 360 8.908786 TTTCTTAGCATAGTATAATTGCAGCT 57.091 30.769 0.00 0.00 38.84 4.24
360 361 7.895975 TCTTAGCATAGTATAATTGCAGCTG 57.104 36.000 10.11 10.11 38.84 4.24
361 362 6.369890 TCTTAGCATAGTATAATTGCAGCTGC 59.630 38.462 31.89 31.89 38.84 5.25
362 363 3.755378 AGCATAGTATAATTGCAGCTGCC 59.245 43.478 34.64 17.79 41.18 4.85
363 364 3.755378 GCATAGTATAATTGCAGCTGCCT 59.245 43.478 34.64 23.58 41.18 4.75
364 365 4.937620 GCATAGTATAATTGCAGCTGCCTA 59.062 41.667 34.64 24.85 41.18 3.93
365 366 5.587844 GCATAGTATAATTGCAGCTGCCTAT 59.412 40.000 34.64 25.81 41.18 2.57
366 367 6.763135 GCATAGTATAATTGCAGCTGCCTATA 59.237 38.462 34.64 25.94 41.18 1.31
367 368 7.443575 GCATAGTATAATTGCAGCTGCCTATAT 59.556 37.037 34.64 27.39 41.18 0.86
368 369 9.987272 CATAGTATAATTGCAGCTGCCTATATA 57.013 33.333 34.64 26.47 41.18 0.86
369 370 9.988815 ATAGTATAATTGCAGCTGCCTATATAC 57.011 33.333 32.10 32.10 41.18 1.47
370 371 7.851228 AGTATAATTGCAGCTGCCTATATACA 58.149 34.615 35.57 20.51 41.18 2.29
371 372 8.489489 AGTATAATTGCAGCTGCCTATATACAT 58.511 33.333 35.57 26.83 41.18 2.29
372 373 9.764363 GTATAATTGCAGCTGCCTATATACATA 57.236 33.333 33.00 21.06 41.18 2.29
375 376 8.668510 AATTGCAGCTGCCTATATACATATAC 57.331 34.615 34.64 3.02 41.18 1.47
376 377 6.790232 TGCAGCTGCCTATATACATATACA 57.210 37.500 34.64 8.22 41.18 2.29
377 378 7.365497 TGCAGCTGCCTATATACATATACAT 57.635 36.000 34.64 0.00 41.18 2.29
378 379 8.477419 TGCAGCTGCCTATATACATATACATA 57.523 34.615 34.64 7.43 41.18 2.29
379 380 8.360390 TGCAGCTGCCTATATACATATACATAC 58.640 37.037 34.64 1.50 41.18 2.39
380 381 8.360390 GCAGCTGCCTATATACATATACATACA 58.640 37.037 28.76 0.00 34.31 2.29
381 382 9.684448 CAGCTGCCTATATACATATACATACAC 57.316 37.037 0.00 0.00 0.00 2.90
382 383 9.647918 AGCTGCCTATATACATATACATACACT 57.352 33.333 0.00 0.00 0.00 3.55
393 394 8.173542 ACATATACATACACTATTCCGTGTGA 57.826 34.615 6.82 0.00 46.77 3.58
394 395 8.635328 ACATATACATACACTATTCCGTGTGAA 58.365 33.333 6.82 0.00 46.77 3.18
395 396 9.639601 CATATACATACACTATTCCGTGTGAAT 57.360 33.333 6.82 0.00 46.77 2.57
398 399 6.869695 ACATACACTATTCCGTGTGAATACA 58.130 36.000 6.82 0.00 46.77 2.29
399 400 7.497595 ACATACACTATTCCGTGTGAATACAT 58.502 34.615 6.82 0.00 46.77 2.29
400 401 7.438160 ACATACACTATTCCGTGTGAATACATG 59.562 37.037 6.82 0.00 46.77 3.21
401 402 4.570772 ACACTATTCCGTGTGAATACATGC 59.429 41.667 0.00 0.00 45.74 4.06
402 403 4.570369 CACTATTCCGTGTGAATACATGCA 59.430 41.667 0.00 0.00 41.96 3.96
403 404 5.237127 CACTATTCCGTGTGAATACATGCAT 59.763 40.000 0.00 0.00 41.96 3.96
404 405 6.423604 CACTATTCCGTGTGAATACATGCATA 59.576 38.462 0.00 0.00 41.96 3.14
405 406 7.118245 CACTATTCCGTGTGAATACATGCATAT 59.882 37.037 0.00 0.00 41.96 1.78
406 407 5.922739 TTCCGTGTGAATACATGCATATC 57.077 39.130 0.00 0.00 41.50 1.63
407 408 4.314961 TCCGTGTGAATACATGCATATCC 58.685 43.478 0.00 0.00 41.50 2.59
408 409 3.436704 CCGTGTGAATACATGCATATCCC 59.563 47.826 0.00 0.00 41.50 3.85
409 410 3.436704 CGTGTGAATACATGCATATCCCC 59.563 47.826 0.00 0.00 39.39 4.81
410 411 4.655963 GTGTGAATACATGCATATCCCCT 58.344 43.478 0.00 0.00 39.39 4.79
411 412 5.568624 CGTGTGAATACATGCATATCCCCTA 60.569 44.000 0.00 0.00 39.39 3.53
412 413 6.418101 GTGTGAATACATGCATATCCCCTAT 58.582 40.000 0.00 0.00 39.39 2.57
413 414 6.317140 GTGTGAATACATGCATATCCCCTATG 59.683 42.308 0.00 0.00 39.39 2.23
414 415 6.215227 TGTGAATACATGCATATCCCCTATGA 59.785 38.462 0.00 0.00 39.79 2.15
415 416 6.765036 GTGAATACATGCATATCCCCTATGAG 59.235 42.308 0.00 0.00 39.79 2.90
416 417 3.641434 ACATGCATATCCCCTATGAGC 57.359 47.619 0.00 0.00 39.79 4.26
417 418 2.914941 ACATGCATATCCCCTATGAGCA 59.085 45.455 0.00 0.00 39.79 4.26
418 419 3.276857 CATGCATATCCCCTATGAGCAC 58.723 50.000 0.00 0.00 39.79 4.40
419 420 2.624495 TGCATATCCCCTATGAGCACT 58.376 47.619 0.00 0.00 39.79 4.40
420 421 2.981784 TGCATATCCCCTATGAGCACTT 59.018 45.455 0.00 0.00 39.79 3.16
421 422 3.008375 TGCATATCCCCTATGAGCACTTC 59.992 47.826 0.00 0.00 39.79 3.01
422 423 3.620966 GCATATCCCCTATGAGCACTTCC 60.621 52.174 0.00 0.00 39.79 3.46
423 424 1.051812 ATCCCCTATGAGCACTTCCG 58.948 55.000 0.00 0.00 0.00 4.30
424 425 0.032515 TCCCCTATGAGCACTTCCGA 60.033 55.000 0.00 0.00 0.00 4.55
425 426 0.390860 CCCCTATGAGCACTTCCGAG 59.609 60.000 0.00 0.00 0.00 4.63
426 427 1.403814 CCCTATGAGCACTTCCGAGA 58.596 55.000 0.00 0.00 0.00 4.04
427 428 1.967066 CCCTATGAGCACTTCCGAGAT 59.033 52.381 0.00 0.00 0.00 2.75
428 429 3.157881 CCCTATGAGCACTTCCGAGATA 58.842 50.000 0.00 0.00 0.00 1.98
429 430 3.057174 CCCTATGAGCACTTCCGAGATAC 60.057 52.174 0.00 0.00 0.00 2.24
430 431 3.823873 CCTATGAGCACTTCCGAGATACT 59.176 47.826 0.00 0.00 0.00 2.12
431 432 3.724508 ATGAGCACTTCCGAGATACTG 57.275 47.619 0.00 0.00 0.00 2.74
432 433 2.723273 TGAGCACTTCCGAGATACTGA 58.277 47.619 0.00 0.00 0.00 3.41
433 434 3.089284 TGAGCACTTCCGAGATACTGAA 58.911 45.455 0.00 0.00 0.00 3.02
434 435 3.119459 TGAGCACTTCCGAGATACTGAAC 60.119 47.826 0.00 0.00 0.00 3.18
435 436 2.166664 AGCACTTCCGAGATACTGAACC 59.833 50.000 0.00 0.00 0.00 3.62
436 437 2.798680 CACTTCCGAGATACTGAACCG 58.201 52.381 0.00 0.00 0.00 4.44
437 438 2.422479 CACTTCCGAGATACTGAACCGA 59.578 50.000 0.00 0.00 0.00 4.69
438 439 2.422832 ACTTCCGAGATACTGAACCGAC 59.577 50.000 0.00 0.00 0.00 4.79
439 440 2.118313 TCCGAGATACTGAACCGACA 57.882 50.000 0.00 0.00 0.00 4.35
440 441 2.651455 TCCGAGATACTGAACCGACAT 58.349 47.619 0.00 0.00 0.00 3.06
441 442 2.617308 TCCGAGATACTGAACCGACATC 59.383 50.000 0.00 0.00 0.00 3.06
442 443 2.357952 CCGAGATACTGAACCGACATCA 59.642 50.000 0.00 0.00 0.00 3.07
443 444 3.364062 CGAGATACTGAACCGACATCAC 58.636 50.000 0.00 0.00 0.00 3.06
444 445 3.364062 GAGATACTGAACCGACATCACG 58.636 50.000 0.00 0.00 0.00 4.35
445 446 2.753452 AGATACTGAACCGACATCACGT 59.247 45.455 0.00 0.00 0.00 4.49
446 447 2.624316 TACTGAACCGACATCACGTC 57.376 50.000 0.00 0.00 41.62 4.34
447 448 0.959553 ACTGAACCGACATCACGTCT 59.040 50.000 0.00 0.00 42.98 4.18
448 449 1.340248 ACTGAACCGACATCACGTCTT 59.660 47.619 0.00 0.00 42.98 3.01
449 450 1.721389 CTGAACCGACATCACGTCTTG 59.279 52.381 0.00 0.00 42.98 3.02
450 451 1.338655 TGAACCGACATCACGTCTTGA 59.661 47.619 1.45 0.00 42.98 3.02
451 452 1.986378 GAACCGACATCACGTCTTGAG 59.014 52.381 1.45 0.00 42.98 3.02
452 453 1.244816 ACCGACATCACGTCTTGAGA 58.755 50.000 1.45 0.00 42.98 3.27
453 454 1.819288 ACCGACATCACGTCTTGAGAT 59.181 47.619 1.45 0.00 42.98 2.75
454 455 2.231478 ACCGACATCACGTCTTGAGATT 59.769 45.455 1.45 0.00 42.98 2.40
455 456 2.600420 CCGACATCACGTCTTGAGATTG 59.400 50.000 1.45 0.00 42.98 2.67
456 457 3.501950 CGACATCACGTCTTGAGATTGA 58.498 45.455 1.45 0.00 42.98 2.57
457 458 3.301906 CGACATCACGTCTTGAGATTGAC 59.698 47.826 1.45 0.00 42.98 3.18
466 467 5.209944 GTCTTGAGATTGACGAATTCACC 57.790 43.478 6.22 0.00 32.26 4.02
467 468 4.690748 GTCTTGAGATTGACGAATTCACCA 59.309 41.667 6.22 0.00 32.26 4.17
468 469 4.690748 TCTTGAGATTGACGAATTCACCAC 59.309 41.667 6.22 0.00 32.26 4.16
469 470 4.001618 TGAGATTGACGAATTCACCACA 57.998 40.909 6.22 0.00 32.26 4.17
470 471 3.996363 TGAGATTGACGAATTCACCACAG 59.004 43.478 6.22 0.00 32.26 3.66
471 472 3.338249 AGATTGACGAATTCACCACAGG 58.662 45.455 6.22 0.00 32.26 4.00
472 473 1.234821 TTGACGAATTCACCACAGGC 58.765 50.000 6.22 0.00 32.26 4.85
473 474 0.107643 TGACGAATTCACCACAGGCA 59.892 50.000 6.22 0.00 0.00 4.75
474 475 0.517316 GACGAATTCACCACAGGCAC 59.483 55.000 6.22 0.00 0.00 5.01
475 476 0.889186 ACGAATTCACCACAGGCACC 60.889 55.000 6.22 0.00 0.00 5.01
476 477 0.606401 CGAATTCACCACAGGCACCT 60.606 55.000 6.22 0.00 0.00 4.00
477 478 1.168714 GAATTCACCACAGGCACCTC 58.831 55.000 0.00 0.00 0.00 3.85
478 479 0.606401 AATTCACCACAGGCACCTCG 60.606 55.000 0.00 0.00 0.00 4.63
479 480 1.768684 ATTCACCACAGGCACCTCGT 61.769 55.000 0.00 0.00 0.00 4.18
480 481 1.116536 TTCACCACAGGCACCTCGTA 61.117 55.000 0.00 0.00 0.00 3.43
481 482 1.079819 CACCACAGGCACCTCGTAG 60.080 63.158 0.00 0.00 0.00 3.51
482 483 1.533273 ACCACAGGCACCTCGTAGT 60.533 57.895 0.00 0.00 0.00 2.73
483 484 1.215647 CCACAGGCACCTCGTAGTC 59.784 63.158 0.00 0.00 0.00 2.59
484 485 1.154016 CACAGGCACCTCGTAGTCG 60.154 63.158 0.00 0.00 38.55 4.18
485 486 1.303074 ACAGGCACCTCGTAGTCGA 60.303 57.895 0.00 0.00 44.12 4.20
486 487 0.680280 ACAGGCACCTCGTAGTCGAT 60.680 55.000 0.00 0.00 45.21 3.59
487 488 0.248661 CAGGCACCTCGTAGTCGATG 60.249 60.000 0.00 0.00 45.21 3.84
488 489 1.065928 GGCACCTCGTAGTCGATGG 59.934 63.158 0.00 0.00 45.21 3.51
489 490 1.381928 GGCACCTCGTAGTCGATGGA 61.382 60.000 0.00 0.00 45.21 3.41
490 491 0.029567 GCACCTCGTAGTCGATGGAG 59.970 60.000 0.00 0.00 45.21 3.86
491 492 1.664873 CACCTCGTAGTCGATGGAGA 58.335 55.000 0.00 0.00 45.21 3.71
492 493 1.331138 CACCTCGTAGTCGATGGAGAC 59.669 57.143 0.00 0.00 45.21 3.36
493 494 1.065636 ACCTCGTAGTCGATGGAGACA 60.066 52.381 0.00 0.00 45.21 3.41
510 511 4.954875 GAGACATCTCCTCCCACTAAATG 58.045 47.826 0.00 0.00 37.02 2.32
511 512 4.624913 AGACATCTCCTCCCACTAAATGA 58.375 43.478 0.00 0.00 0.00 2.57
512 513 5.032846 AGACATCTCCTCCCACTAAATGAA 58.967 41.667 0.00 0.00 0.00 2.57
513 514 5.104259 ACATCTCCTCCCACTAAATGAAC 57.896 43.478 0.00 0.00 0.00 3.18
514 515 4.536090 ACATCTCCTCCCACTAAATGAACA 59.464 41.667 0.00 0.00 0.00 3.18
515 516 5.192522 ACATCTCCTCCCACTAAATGAACAT 59.807 40.000 0.00 0.00 0.00 2.71
516 517 5.359194 TCTCCTCCCACTAAATGAACATC 57.641 43.478 0.00 0.00 0.00 3.06
517 518 4.122776 CTCCTCCCACTAAATGAACATCG 58.877 47.826 0.00 0.00 0.00 3.84
518 519 3.517901 TCCTCCCACTAAATGAACATCGT 59.482 43.478 0.00 0.00 0.00 3.73
519 520 4.019681 TCCTCCCACTAAATGAACATCGTT 60.020 41.667 0.00 0.00 0.00 3.85
520 521 4.094887 CCTCCCACTAAATGAACATCGTTG 59.905 45.833 0.00 0.00 0.00 4.10
521 522 4.900684 TCCCACTAAATGAACATCGTTGA 58.099 39.130 0.00 0.00 0.00 3.18
522 523 5.496556 TCCCACTAAATGAACATCGTTGAT 58.503 37.500 0.00 0.00 0.00 2.57
523 524 6.645306 TCCCACTAAATGAACATCGTTGATA 58.355 36.000 0.00 0.00 0.00 2.15
524 525 7.106890 TCCCACTAAATGAACATCGTTGATAA 58.893 34.615 0.00 0.00 0.00 1.75
525 526 7.279981 TCCCACTAAATGAACATCGTTGATAAG 59.720 37.037 0.00 0.00 0.00 1.73
526 527 6.907212 CCACTAAATGAACATCGTTGATAAGC 59.093 38.462 0.00 0.00 0.00 3.09
527 528 6.907212 CACTAAATGAACATCGTTGATAAGCC 59.093 38.462 0.00 0.00 0.00 4.35
528 529 6.823689 ACTAAATGAACATCGTTGATAAGCCT 59.176 34.615 0.00 0.00 0.00 4.58
529 530 5.490139 AATGAACATCGTTGATAAGCCTG 57.510 39.130 0.00 0.00 0.00 4.85
530 531 3.270027 TGAACATCGTTGATAAGCCTGG 58.730 45.455 0.00 0.00 0.00 4.45
531 532 3.055458 TGAACATCGTTGATAAGCCTGGA 60.055 43.478 0.00 0.00 0.00 3.86
532 533 3.627395 ACATCGTTGATAAGCCTGGAA 57.373 42.857 0.00 0.00 0.00 3.53
533 534 3.950397 ACATCGTTGATAAGCCTGGAAA 58.050 40.909 0.00 0.00 0.00 3.13
534 535 4.526970 ACATCGTTGATAAGCCTGGAAAT 58.473 39.130 0.00 0.00 0.00 2.17
535 536 5.680619 ACATCGTTGATAAGCCTGGAAATA 58.319 37.500 0.00 0.00 0.00 1.40
536 537 6.119536 ACATCGTTGATAAGCCTGGAAATAA 58.880 36.000 0.00 0.00 0.00 1.40
537 538 6.772716 ACATCGTTGATAAGCCTGGAAATAAT 59.227 34.615 0.00 0.00 0.00 1.28
538 539 7.285401 ACATCGTTGATAAGCCTGGAAATAATT 59.715 33.333 0.00 0.00 0.00 1.40
539 540 7.639113 TCGTTGATAAGCCTGGAAATAATTT 57.361 32.000 0.00 0.00 0.00 1.82
540 541 7.479980 TCGTTGATAAGCCTGGAAATAATTTG 58.520 34.615 0.00 0.00 0.00 2.32
541 542 7.338196 TCGTTGATAAGCCTGGAAATAATTTGA 59.662 33.333 0.00 0.00 0.00 2.69
542 543 7.973388 CGTTGATAAGCCTGGAAATAATTTGAA 59.027 33.333 0.00 0.00 0.00 2.69
543 544 9.651913 GTTGATAAGCCTGGAAATAATTTGAAA 57.348 29.630 0.00 0.00 0.00 2.69
564 565 2.882927 AAATACGAGCAGCGGTATCA 57.117 45.000 11.23 0.00 46.49 2.15
565 566 2.882927 AATACGAGCAGCGGTATCAA 57.117 45.000 11.23 0.00 46.49 2.57
566 567 2.423926 ATACGAGCAGCGGTATCAAG 57.576 50.000 6.39 0.00 46.49 3.02
567 568 1.100510 TACGAGCAGCGGTATCAAGT 58.899 50.000 4.06 0.00 46.49 3.16
568 569 0.246635 ACGAGCAGCGGTATCAAGTT 59.753 50.000 4.06 0.00 46.49 2.66
569 570 1.337823 ACGAGCAGCGGTATCAAGTTT 60.338 47.619 4.06 0.00 46.49 2.66
570 571 2.094390 ACGAGCAGCGGTATCAAGTTTA 60.094 45.455 4.06 0.00 46.49 2.01
571 572 2.535984 CGAGCAGCGGTATCAAGTTTAG 59.464 50.000 0.00 0.00 36.03 1.85
572 573 2.866762 GAGCAGCGGTATCAAGTTTAGG 59.133 50.000 0.00 0.00 0.00 2.69
573 574 2.500098 AGCAGCGGTATCAAGTTTAGGA 59.500 45.455 0.00 0.00 0.00 2.94
574 575 2.608090 GCAGCGGTATCAAGTTTAGGAC 59.392 50.000 0.00 0.00 0.00 3.85
575 576 3.679083 GCAGCGGTATCAAGTTTAGGACT 60.679 47.826 0.00 0.00 41.47 3.85
586 587 4.790718 AGTTTAGGACTTGAACCCTTGT 57.209 40.909 0.00 0.00 33.92 3.16
587 588 4.461198 AGTTTAGGACTTGAACCCTTGTG 58.539 43.478 0.00 0.00 33.92 3.33
588 589 3.502123 TTAGGACTTGAACCCTTGTGG 57.498 47.619 0.00 0.00 41.37 4.17
599 600 3.455737 CCTTGTGGGTTGGTTCCAT 57.544 52.632 0.00 0.00 36.58 3.41
600 601 1.256812 CCTTGTGGGTTGGTTCCATC 58.743 55.000 0.00 0.00 36.58 3.51
601 602 1.480312 CCTTGTGGGTTGGTTCCATCA 60.480 52.381 0.00 0.00 36.58 3.07
602 603 1.613437 CTTGTGGGTTGGTTCCATCAC 59.387 52.381 10.94 10.94 36.58 3.06
603 604 0.553333 TGTGGGTTGGTTCCATCACA 59.447 50.000 14.29 14.29 36.58 3.58
604 605 1.063642 TGTGGGTTGGTTCCATCACAA 60.064 47.619 15.24 3.44 36.58 3.33
605 606 1.613437 GTGGGTTGGTTCCATCACAAG 59.387 52.381 6.44 0.00 36.58 3.16
606 607 1.256812 GGGTTGGTTCCATCACAAGG 58.743 55.000 0.00 0.00 0.00 3.61
607 608 1.203001 GGGTTGGTTCCATCACAAGGA 60.203 52.381 0.00 0.00 0.00 3.36
608 609 2.593026 GGTTGGTTCCATCACAAGGAA 58.407 47.619 0.00 0.00 42.62 3.36
615 616 3.713826 TCCATCACAAGGAACCTAACC 57.286 47.619 0.00 0.00 30.71 2.85
616 617 2.983192 TCCATCACAAGGAACCTAACCA 59.017 45.455 0.00 0.00 30.71 3.67
617 618 3.591527 TCCATCACAAGGAACCTAACCAT 59.408 43.478 0.00 0.00 30.71 3.55
618 619 4.785914 TCCATCACAAGGAACCTAACCATA 59.214 41.667 0.00 0.00 30.71 2.74
619 620 5.431731 TCCATCACAAGGAACCTAACCATAT 59.568 40.000 0.00 0.00 30.71 1.78
620 621 6.617784 TCCATCACAAGGAACCTAACCATATA 59.382 38.462 0.00 0.00 30.71 0.86
621 622 7.128109 TCCATCACAAGGAACCTAACCATATAA 59.872 37.037 0.00 0.00 30.71 0.98
622 623 7.445402 CCATCACAAGGAACCTAACCATATAAG 59.555 40.741 0.00 0.00 0.00 1.73
623 624 7.743116 TCACAAGGAACCTAACCATATAAGA 57.257 36.000 0.00 0.00 0.00 2.10
624 625 8.331931 TCACAAGGAACCTAACCATATAAGAT 57.668 34.615 0.00 0.00 0.00 2.40
625 626 9.442062 TCACAAGGAACCTAACCATATAAGATA 57.558 33.333 0.00 0.00 0.00 1.98
626 627 9.490379 CACAAGGAACCTAACCATATAAGATAC 57.510 37.037 0.00 0.00 0.00 2.24
627 628 9.220906 ACAAGGAACCTAACCATATAAGATACA 57.779 33.333 0.00 0.00 0.00 2.29
628 629 9.490379 CAAGGAACCTAACCATATAAGATACAC 57.510 37.037 0.00 0.00 0.00 2.90
629 630 8.792830 AGGAACCTAACCATATAAGATACACA 57.207 34.615 0.00 0.00 0.00 3.72
630 631 9.393786 AGGAACCTAACCATATAAGATACACAT 57.606 33.333 0.00 0.00 0.00 3.21
631 632 9.436957 GGAACCTAACCATATAAGATACACATG 57.563 37.037 0.00 0.00 0.00 3.21
632 633 9.998106 GAACCTAACCATATAAGATACACATGT 57.002 33.333 0.00 0.00 0.00 3.21
651 652 9.698309 ACACATGTAGTTAGATATACATTCTGC 57.302 33.333 0.00 0.00 39.91 4.26
652 653 9.696917 CACATGTAGTTAGATATACATTCTGCA 57.303 33.333 0.00 0.00 39.91 4.41
653 654 9.698309 ACATGTAGTTAGATATACATTCTGCAC 57.302 33.333 0.00 0.00 39.91 4.57
654 655 9.696917 CATGTAGTTAGATATACATTCTGCACA 57.303 33.333 0.00 0.00 39.91 4.57
655 656 9.698309 ATGTAGTTAGATATACATTCTGCACAC 57.302 33.333 0.00 0.00 39.07 3.82
656 657 8.691797 TGTAGTTAGATATACATTCTGCACACA 58.308 33.333 0.00 0.00 0.00 3.72
657 658 8.969267 GTAGTTAGATATACATTCTGCACACAC 58.031 37.037 0.00 0.00 0.00 3.82
658 659 6.986817 AGTTAGATATACATTCTGCACACACC 59.013 38.462 0.00 0.00 0.00 4.16
659 660 4.371786 AGATATACATTCTGCACACACCG 58.628 43.478 0.00 0.00 0.00 4.94
660 661 2.472695 ATACATTCTGCACACACCGT 57.527 45.000 0.00 0.00 0.00 4.83
661 662 2.248280 TACATTCTGCACACACCGTT 57.752 45.000 0.00 0.00 0.00 4.44
662 663 0.662619 ACATTCTGCACACACCGTTG 59.337 50.000 0.00 0.00 0.00 4.10
663 664 0.040157 CATTCTGCACACACCGTTGG 60.040 55.000 0.00 0.00 0.00 3.77
664 665 0.465460 ATTCTGCACACACCGTTGGT 60.465 50.000 0.00 0.00 35.62 3.67
665 666 0.178301 TTCTGCACACACCGTTGGTA 59.822 50.000 0.00 0.00 32.11 3.25
666 667 0.394938 TCTGCACACACCGTTGGTAT 59.605 50.000 0.00 0.00 32.11 2.73
667 668 0.516877 CTGCACACACCGTTGGTATG 59.483 55.000 0.00 0.00 36.01 2.39
668 669 1.209127 GCACACACCGTTGGTATGC 59.791 57.895 0.00 0.00 32.64 3.14
669 670 1.234615 GCACACACCGTTGGTATGCT 61.235 55.000 10.24 0.00 32.64 3.79
670 671 1.942127 GCACACACCGTTGGTATGCTA 60.942 52.381 10.24 0.00 32.64 3.49
671 672 1.730064 CACACACCGTTGGTATGCTAC 59.270 52.381 0.00 0.00 32.64 3.58
685 686 6.086785 GGTATGCTACCTAGGTACTCAAAG 57.913 45.833 18.10 10.04 45.52 2.77
686 687 5.832060 GGTATGCTACCTAGGTACTCAAAGA 59.168 44.000 18.10 6.33 45.52 2.52
687 688 6.016108 GGTATGCTACCTAGGTACTCAAAGAG 60.016 46.154 18.10 8.55 45.52 2.85
688 689 5.188988 TGCTACCTAGGTACTCAAAGAGA 57.811 43.478 18.10 0.00 41.75 3.10
689 690 5.577100 TGCTACCTAGGTACTCAAAGAGAA 58.423 41.667 18.10 0.00 41.75 2.87
690 691 6.014647 TGCTACCTAGGTACTCAAAGAGAAA 58.985 40.000 18.10 0.00 41.75 2.52
691 692 6.495872 TGCTACCTAGGTACTCAAAGAGAAAA 59.504 38.462 18.10 0.00 41.75 2.29
692 693 7.036829 GCTACCTAGGTACTCAAAGAGAAAAG 58.963 42.308 18.10 5.90 41.75 2.27
693 694 6.361768 ACCTAGGTACTCAAAGAGAAAAGG 57.638 41.667 14.41 3.37 41.75 3.11
694 695 5.248705 ACCTAGGTACTCAAAGAGAAAAGGG 59.751 44.000 14.41 0.00 41.75 3.95
695 696 5.248705 CCTAGGTACTCAAAGAGAAAAGGGT 59.751 44.000 0.00 0.00 41.75 4.34
696 697 5.648330 AGGTACTCAAAGAGAAAAGGGTT 57.352 39.130 0.31 0.00 33.32 4.11
697 698 6.014771 AGGTACTCAAAGAGAAAAGGGTTT 57.985 37.500 0.31 0.00 33.32 3.27
698 699 5.828328 AGGTACTCAAAGAGAAAAGGGTTTG 59.172 40.000 0.31 0.00 33.32 2.93
699 700 5.826208 GGTACTCAAAGAGAAAAGGGTTTGA 59.174 40.000 0.31 0.00 36.74 2.69
700 701 6.490381 GGTACTCAAAGAGAAAAGGGTTTGAT 59.510 38.462 0.31 0.00 38.04 2.57
701 702 7.664318 GGTACTCAAAGAGAAAAGGGTTTGATA 59.336 37.037 0.31 0.00 38.04 2.15
702 703 9.063615 GTACTCAAAGAGAAAAGGGTTTGATAA 57.936 33.333 0.31 0.00 38.04 1.75
703 704 8.712228 ACTCAAAGAGAAAAGGGTTTGATAAT 57.288 30.769 0.31 0.00 38.04 1.28
704 705 8.797438 ACTCAAAGAGAAAAGGGTTTGATAATC 58.203 33.333 0.31 0.00 38.04 1.75
705 706 8.940397 TCAAAGAGAAAAGGGTTTGATAATCT 57.060 30.769 0.00 0.00 34.72 2.40
706 707 9.367160 TCAAAGAGAAAAGGGTTTGATAATCTT 57.633 29.630 0.00 0.00 34.72 2.40
707 708 9.987272 CAAAGAGAAAAGGGTTTGATAATCTTT 57.013 29.630 0.00 0.00 34.54 2.52
709 710 9.593565 AAGAGAAAAGGGTTTGATAATCTTTCT 57.406 29.630 0.00 0.00 0.00 2.52
710 711 9.593565 AGAGAAAAGGGTTTGATAATCTTTCTT 57.406 29.630 0.00 0.00 0.00 2.52
711 712 9.847706 GAGAAAAGGGTTTGATAATCTTTCTTC 57.152 33.333 0.00 0.00 0.00 2.87
712 713 8.807118 AGAAAAGGGTTTGATAATCTTTCTTCC 58.193 33.333 0.00 0.00 0.00 3.46
713 714 6.759497 AAGGGTTTGATAATCTTTCTTCCG 57.241 37.500 0.00 0.00 0.00 4.30
714 715 5.816682 AGGGTTTGATAATCTTTCTTCCGT 58.183 37.500 0.00 0.00 0.00 4.69
715 716 5.648092 AGGGTTTGATAATCTTTCTTCCGTG 59.352 40.000 0.00 0.00 0.00 4.94
716 717 5.414765 GGGTTTGATAATCTTTCTTCCGTGT 59.585 40.000 0.00 0.00 0.00 4.49
717 718 6.072119 GGGTTTGATAATCTTTCTTCCGTGTT 60.072 38.462 0.00 0.00 0.00 3.32
718 719 7.120138 GGGTTTGATAATCTTTCTTCCGTGTTA 59.880 37.037 0.00 0.00 0.00 2.41
719 720 8.508875 GGTTTGATAATCTTTCTTCCGTGTTAA 58.491 33.333 0.00 0.00 0.00 2.01
722 723 9.443323 TTGATAATCTTTCTTCCGTGTTAATCA 57.557 29.630 0.00 0.00 0.00 2.57
723 724 9.613428 TGATAATCTTTCTTCCGTGTTAATCAT 57.387 29.630 0.00 0.00 0.00 2.45
725 726 7.921786 AATCTTTCTTCCGTGTTAATCATCA 57.078 32.000 0.00 0.00 0.00 3.07
726 727 8.511604 AATCTTTCTTCCGTGTTAATCATCAT 57.488 30.769 0.00 0.00 0.00 2.45
727 728 7.921786 TCTTTCTTCCGTGTTAATCATCATT 57.078 32.000 0.00 0.00 0.00 2.57
728 729 7.751732 TCTTTCTTCCGTGTTAATCATCATTG 58.248 34.615 0.00 0.00 0.00 2.82
729 730 6.435430 TTCTTCCGTGTTAATCATCATTGG 57.565 37.500 0.00 0.00 0.00 3.16
730 731 5.496556 TCTTCCGTGTTAATCATCATTGGT 58.503 37.500 0.00 0.00 0.00 3.67
731 732 5.353956 TCTTCCGTGTTAATCATCATTGGTG 59.646 40.000 0.00 0.00 0.00 4.17
732 733 4.584874 TCCGTGTTAATCATCATTGGTGT 58.415 39.130 0.00 0.00 0.00 4.16
733 734 5.735766 TCCGTGTTAATCATCATTGGTGTA 58.264 37.500 0.00 0.00 0.00 2.90
734 735 6.174049 TCCGTGTTAATCATCATTGGTGTAA 58.826 36.000 0.00 0.00 0.00 2.41
735 736 6.826231 TCCGTGTTAATCATCATTGGTGTAAT 59.174 34.615 0.00 0.00 0.00 1.89
736 737 7.011950 TCCGTGTTAATCATCATTGGTGTAATC 59.988 37.037 0.00 0.00 0.00 1.75
737 738 7.012327 CCGTGTTAATCATCATTGGTGTAATCT 59.988 37.037 0.00 0.00 0.00 2.40
738 739 8.397906 CGTGTTAATCATCATTGGTGTAATCTT 58.602 33.333 0.00 0.00 0.00 2.40
744 745 9.466497 AATCATCATTGGTGTAATCTTTGTACT 57.534 29.630 0.00 0.00 0.00 2.73
745 746 8.267620 TCATCATTGGTGTAATCTTTGTACTG 57.732 34.615 0.00 0.00 0.00 2.74
746 747 6.494893 TCATTGGTGTAATCTTTGTACTGC 57.505 37.500 0.00 0.00 0.00 4.40
747 748 6.000840 TCATTGGTGTAATCTTTGTACTGCA 58.999 36.000 0.00 0.00 0.00 4.41
748 749 6.658816 TCATTGGTGTAATCTTTGTACTGCAT 59.341 34.615 0.00 0.00 0.00 3.96
749 750 6.892658 TTGGTGTAATCTTTGTACTGCATT 57.107 33.333 0.00 0.00 0.00 3.56
750 751 6.892658 TGGTGTAATCTTTGTACTGCATTT 57.107 33.333 0.00 0.00 0.00 2.32
751 752 6.908825 TGGTGTAATCTTTGTACTGCATTTC 58.091 36.000 0.00 0.00 0.00 2.17
752 753 6.714810 TGGTGTAATCTTTGTACTGCATTTCT 59.285 34.615 0.00 0.00 0.00 2.52
753 754 7.230510 TGGTGTAATCTTTGTACTGCATTTCTT 59.769 33.333 0.00 0.00 0.00 2.52
754 755 8.726988 GGTGTAATCTTTGTACTGCATTTCTTA 58.273 33.333 0.00 0.00 0.00 2.10
785 786 9.685005 GTAAGTATTTAACAGCAATAACTGACG 57.315 33.333 0.00 0.00 40.25 4.35
786 787 7.900782 AGTATTTAACAGCAATAACTGACGT 57.099 32.000 0.00 0.00 40.25 4.34
787 788 8.319143 AGTATTTAACAGCAATAACTGACGTT 57.681 30.769 0.00 0.00 40.25 3.99
788 789 8.227791 AGTATTTAACAGCAATAACTGACGTTG 58.772 33.333 0.00 0.00 40.25 4.10
789 790 6.606234 TTTAACAGCAATAACTGACGTTGA 57.394 33.333 0.00 0.00 40.25 3.18
790 791 6.795098 TTAACAGCAATAACTGACGTTGAT 57.205 33.333 0.00 0.00 40.25 2.57
791 792 4.668576 ACAGCAATAACTGACGTTGATG 57.331 40.909 0.00 0.00 42.93 3.07
792 793 3.120199 ACAGCAATAACTGACGTTGATGC 60.120 43.478 0.00 8.18 41.49 3.91
793 794 3.338249 AGCAATAACTGACGTTGATGCT 58.662 40.909 11.30 11.30 44.42 3.79
794 795 3.125829 AGCAATAACTGACGTTGATGCTG 59.874 43.478 14.45 0.00 45.91 4.41
795 796 3.125146 GCAATAACTGACGTTGATGCTGA 59.875 43.478 0.00 0.00 40.18 4.26
796 797 4.378356 GCAATAACTGACGTTGATGCTGAA 60.378 41.667 0.00 0.00 40.18 3.02
797 798 5.688823 CAATAACTGACGTTGATGCTGAAA 58.311 37.500 0.00 0.00 34.59 2.69
798 799 3.885484 AACTGACGTTGATGCTGAAAG 57.115 42.857 0.00 0.00 30.67 2.62
799 800 3.111853 ACTGACGTTGATGCTGAAAGA 57.888 42.857 0.00 0.00 34.07 2.52
800 801 3.466836 ACTGACGTTGATGCTGAAAGAA 58.533 40.909 0.00 0.00 34.07 2.52
801 802 3.876914 ACTGACGTTGATGCTGAAAGAAA 59.123 39.130 0.00 0.00 34.07 2.52
802 803 4.335315 ACTGACGTTGATGCTGAAAGAAAA 59.665 37.500 0.00 0.00 34.07 2.29
803 804 5.163663 ACTGACGTTGATGCTGAAAGAAAAA 60.164 36.000 0.00 0.00 34.07 1.94
824 825 6.515272 AAAATTACAGTAACTGATGCTGGG 57.485 37.500 7.81 0.00 45.15 4.45
825 826 2.691409 TACAGTAACTGATGCTGGGC 57.309 50.000 7.81 0.00 45.15 5.36
826 827 0.035056 ACAGTAACTGATGCTGGGCC 60.035 55.000 7.81 0.00 45.15 5.80
827 828 1.091771 CAGTAACTGATGCTGGGCCG 61.092 60.000 0.00 0.00 38.03 6.13
828 829 1.078426 GTAACTGATGCTGGGCCGT 60.078 57.895 0.00 0.00 0.00 5.68
829 830 0.177141 GTAACTGATGCTGGGCCGTA 59.823 55.000 0.00 0.00 0.00 4.02
830 831 0.464036 TAACTGATGCTGGGCCGTAG 59.536 55.000 0.00 0.00 0.00 3.51
831 832 2.590007 CTGATGCTGGGCCGTAGC 60.590 66.667 20.36 20.36 41.49 3.58
835 836 3.083349 TGCTGGGCCGTAGCAGAT 61.083 61.111 24.50 0.00 45.52 2.90
836 837 2.190578 GCTGGGCCGTAGCAGATT 59.809 61.111 21.75 0.00 42.56 2.40
837 838 2.182842 GCTGGGCCGTAGCAGATTG 61.183 63.158 21.75 0.00 42.56 2.67
838 839 1.522092 CTGGGCCGTAGCAGATTGA 59.478 57.895 0.00 0.00 42.56 2.57
839 840 0.811616 CTGGGCCGTAGCAGATTGAC 60.812 60.000 0.00 0.00 42.56 3.18
840 841 1.264749 TGGGCCGTAGCAGATTGACT 61.265 55.000 0.00 0.00 42.56 3.41
841 842 0.107654 GGGCCGTAGCAGATTGACTT 60.108 55.000 0.00 0.00 42.56 3.01
842 843 1.138266 GGGCCGTAGCAGATTGACTTA 59.862 52.381 0.00 0.00 42.56 2.24
843 844 2.202566 GGCCGTAGCAGATTGACTTAC 58.797 52.381 0.00 0.00 42.56 2.34
844 845 2.159085 GGCCGTAGCAGATTGACTTACT 60.159 50.000 0.00 0.00 42.56 2.24
845 846 3.067742 GGCCGTAGCAGATTGACTTACTA 59.932 47.826 0.00 0.00 42.56 1.82
846 847 4.043073 GCCGTAGCAGATTGACTTACTAC 58.957 47.826 0.00 0.00 39.53 2.73
847 848 4.439700 GCCGTAGCAGATTGACTTACTACA 60.440 45.833 0.00 0.00 36.38 2.74
848 849 5.035443 CCGTAGCAGATTGACTTACTACAC 58.965 45.833 0.00 0.00 36.38 2.90
849 850 5.163642 CCGTAGCAGATTGACTTACTACACT 60.164 44.000 0.00 0.00 36.38 3.55
850 851 5.739630 CGTAGCAGATTGACTTACTACACTG 59.260 44.000 0.00 0.00 36.38 3.66
851 852 5.984695 AGCAGATTGACTTACTACACTGA 57.015 39.130 0.00 0.00 0.00 3.41
852 853 6.537453 AGCAGATTGACTTACTACACTGAT 57.463 37.500 0.00 0.00 0.00 2.90
853 854 7.646548 AGCAGATTGACTTACTACACTGATA 57.353 36.000 0.00 0.00 0.00 2.15
854 855 7.484975 AGCAGATTGACTTACTACACTGATAC 58.515 38.462 0.00 0.00 0.00 2.24
855 856 7.122799 AGCAGATTGACTTACTACACTGATACA 59.877 37.037 0.00 0.00 0.00 2.29
856 857 7.221067 GCAGATTGACTTACTACACTGATACAC 59.779 40.741 0.00 0.00 0.00 2.90
857 858 8.244113 CAGATTGACTTACTACACTGATACACA 58.756 37.037 0.00 0.00 0.00 3.72
858 859 8.972127 AGATTGACTTACTACACTGATACACAT 58.028 33.333 0.00 0.00 0.00 3.21
859 860 8.932945 ATTGACTTACTACACTGATACACATG 57.067 34.615 0.00 0.00 0.00 3.21
860 861 6.330278 TGACTTACTACACTGATACACATGC 58.670 40.000 0.00 0.00 0.00 4.06
861 862 6.152831 TGACTTACTACACTGATACACATGCT 59.847 38.462 0.00 0.00 0.00 3.79
862 863 6.565234 ACTTACTACACTGATACACATGCTC 58.435 40.000 0.00 0.00 0.00 4.26
899 900 3.076916 GGGTGCTGGGCCAAATCC 61.077 66.667 8.04 4.86 0.00 3.01
910 911 1.000896 CCAAATCCGGCCCACTTCT 60.001 57.895 0.00 0.00 0.00 2.85
920 921 0.475906 GCCCACTTCTAGGCCATGAT 59.524 55.000 5.01 0.00 43.76 2.45
921 922 1.544314 GCCCACTTCTAGGCCATGATC 60.544 57.143 5.01 0.00 43.76 2.92
922 923 1.770658 CCCACTTCTAGGCCATGATCA 59.229 52.381 5.01 0.00 0.00 2.92
923 924 2.486191 CCCACTTCTAGGCCATGATCAC 60.486 54.545 5.01 0.00 0.00 3.06
924 925 2.486191 CCACTTCTAGGCCATGATCACC 60.486 54.545 5.01 0.00 0.00 4.02
925 926 1.771255 ACTTCTAGGCCATGATCACCC 59.229 52.381 5.01 0.00 0.00 4.61
926 927 1.770658 CTTCTAGGCCATGATCACCCA 59.229 52.381 5.01 0.00 0.00 4.51
927 928 2.123018 TCTAGGCCATGATCACCCAT 57.877 50.000 5.01 0.00 0.00 4.00
2337 2595 4.263435 TGCACTGATTGTTGATGCATCTA 58.737 39.130 26.32 17.25 41.18 1.98
3445 4609 7.277174 ACAGTTAATTTTTCTCCTTCAGTGG 57.723 36.000 0.00 0.00 0.00 4.00
3453 4617 3.051940 TCTCCTTCAGTGGGCTATGAT 57.948 47.619 0.00 0.00 0.00 2.45
3454 4618 4.199002 TCTCCTTCAGTGGGCTATGATA 57.801 45.455 0.00 0.00 0.00 2.15
3455 4619 4.155709 TCTCCTTCAGTGGGCTATGATAG 58.844 47.826 0.00 0.00 0.00 2.08
3456 4620 3.242867 TCCTTCAGTGGGCTATGATAGG 58.757 50.000 1.11 0.00 0.00 2.57
3481 4651 9.448294 GGTAGTATCTTATCTTTGTCAACTACG 57.552 37.037 0.00 0.00 38.30 3.51
3801 4988 2.351726 GACCAAAGTGTATAAGCTGCCG 59.648 50.000 0.00 0.00 0.00 5.69
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 8.425577 TTCAAAAATATCCGTTGCTTCAAAAA 57.574 26.923 0.00 0.00 0.00 1.94
61 62 8.600449 ATTCAAAAATATCCGTTGCTTCAAAA 57.400 26.923 0.00 0.00 0.00 2.44
62 63 7.869937 TGATTCAAAAATATCCGTTGCTTCAAA 59.130 29.630 0.00 0.00 0.00 2.69
63 64 7.374272 TGATTCAAAAATATCCGTTGCTTCAA 58.626 30.769 0.00 0.00 0.00 2.69
64 65 6.918626 TGATTCAAAAATATCCGTTGCTTCA 58.081 32.000 0.00 0.00 0.00 3.02
65 66 7.810766 TTGATTCAAAAATATCCGTTGCTTC 57.189 32.000 0.00 0.00 0.00 3.86
66 67 8.034215 TCATTGATTCAAAAATATCCGTTGCTT 58.966 29.630 2.68 0.00 0.00 3.91
67 68 7.546358 TCATTGATTCAAAAATATCCGTTGCT 58.454 30.769 2.68 0.00 0.00 3.91
68 69 7.754069 TCATTGATTCAAAAATATCCGTTGC 57.246 32.000 2.68 0.00 0.00 4.17
69 70 9.357652 AGTTCATTGATTCAAAAATATCCGTTG 57.642 29.630 2.68 0.00 0.00 4.10
70 71 9.927668 AAGTTCATTGATTCAAAAATATCCGTT 57.072 25.926 2.68 0.00 0.00 4.44
71 72 9.927668 AAAGTTCATTGATTCAAAAATATCCGT 57.072 25.926 2.68 0.00 0.00 4.69
83 84 9.667989 CCCAAATTTCAAAAAGTTCATTGATTC 57.332 29.630 5.24 0.00 35.63 2.52
84 85 9.406113 TCCCAAATTTCAAAAAGTTCATTGATT 57.594 25.926 5.24 0.00 35.63 2.57
85 86 8.977267 TCCCAAATTTCAAAAAGTTCATTGAT 57.023 26.923 5.24 0.00 35.63 2.57
86 87 8.672815 GTTCCCAAATTTCAAAAAGTTCATTGA 58.327 29.630 0.00 1.10 33.93 2.57
87 88 8.676401 AGTTCCCAAATTTCAAAAAGTTCATTG 58.324 29.630 0.00 0.00 0.00 2.82
88 89 8.806429 AGTTCCCAAATTTCAAAAAGTTCATT 57.194 26.923 0.00 0.00 0.00 2.57
90 91 9.898152 AATAGTTCCCAAATTTCAAAAAGTTCA 57.102 25.926 0.00 0.00 0.00 3.18
103 104 9.566432 TGCAATTTTTGTTAATAGTTCCCAAAT 57.434 25.926 0.00 0.00 0.00 2.32
104 105 8.964476 TGCAATTTTTGTTAATAGTTCCCAAA 57.036 26.923 0.00 0.00 0.00 3.28
105 106 9.566432 AATGCAATTTTTGTTAATAGTTCCCAA 57.434 25.926 0.00 0.00 26.74 4.12
106 107 9.566432 AAATGCAATTTTTGTTAATAGTTCCCA 57.434 25.926 0.00 0.00 46.10 4.37
107 108 9.824534 CAAATGCAATTTTTGTTAATAGTTCCC 57.175 29.630 0.00 0.00 46.10 3.97
115 116 8.650714 GGCAAAAACAAATGCAATTTTTGTTAA 58.349 25.926 23.08 0.00 46.10 2.01
116 117 8.031277 AGGCAAAAACAAATGCAATTTTTGTTA 58.969 25.926 23.08 0.00 46.10 2.41
117 118 6.872547 AGGCAAAAACAAATGCAATTTTTGTT 59.127 26.923 25.77 23.02 46.10 2.83
118 119 6.396450 AGGCAAAAACAAATGCAATTTTTGT 58.604 28.000 25.77 19.94 46.10 2.83
119 120 6.889019 AGGCAAAAACAAATGCAATTTTTG 57.111 29.167 23.51 23.51 46.10 2.44
120 121 7.902387 AAAGGCAAAAACAAATGCAATTTTT 57.098 24.000 0.00 0.00 46.10 1.94
121 122 7.902387 AAAAGGCAAAAACAAATGCAATTTT 57.098 24.000 0.00 4.15 46.10 1.82
123 124 6.313164 CCAAAAAGGCAAAAACAAATGCAATT 59.687 30.769 0.00 0.00 44.32 2.32
124 125 5.811100 CCAAAAAGGCAAAAACAAATGCAAT 59.189 32.000 0.00 0.00 44.32 3.56
125 126 5.047802 TCCAAAAAGGCAAAAACAAATGCAA 60.048 32.000 0.00 0.00 44.32 4.08
126 127 4.460382 TCCAAAAAGGCAAAAACAAATGCA 59.540 33.333 0.00 0.00 44.32 3.96
127 128 4.797868 GTCCAAAAAGGCAAAAACAAATGC 59.202 37.500 0.00 0.00 41.82 3.56
128 129 5.947443 TGTCCAAAAAGGCAAAAACAAATG 58.053 33.333 0.00 0.00 37.29 2.32
129 130 6.772360 ATGTCCAAAAAGGCAAAAACAAAT 57.228 29.167 0.00 0.00 37.29 2.32
130 131 6.581171 AATGTCCAAAAAGGCAAAAACAAA 57.419 29.167 0.00 0.00 37.29 2.83
131 132 6.581171 AAATGTCCAAAAAGGCAAAAACAA 57.419 29.167 0.00 0.00 37.29 2.83
132 133 6.581171 AAAATGTCCAAAAAGGCAAAAACA 57.419 29.167 0.00 0.00 37.29 2.83
133 134 8.972262 TTAAAAATGTCCAAAAAGGCAAAAAC 57.028 26.923 0.00 0.00 37.29 2.43
135 136 9.578439 CATTTAAAAATGTCCAAAAAGGCAAAA 57.422 25.926 7.18 0.00 40.61 2.44
156 157 8.495148 CGATCGAATAATGTCCATGAACATTTA 58.505 33.333 15.92 2.91 45.29 1.40
157 158 7.355017 CGATCGAATAATGTCCATGAACATTT 58.645 34.615 15.92 0.00 45.29 2.32
159 160 5.409520 CCGATCGAATAATGTCCATGAACAT 59.590 40.000 18.66 0.00 41.60 2.71
160 161 4.749598 CCGATCGAATAATGTCCATGAACA 59.250 41.667 18.66 0.00 0.00 3.18
161 162 4.750098 ACCGATCGAATAATGTCCATGAAC 59.250 41.667 18.66 0.00 0.00 3.18
162 163 4.749598 CACCGATCGAATAATGTCCATGAA 59.250 41.667 18.66 0.00 0.00 2.57
163 164 4.202212 ACACCGATCGAATAATGTCCATGA 60.202 41.667 18.66 0.00 0.00 3.07
164 165 4.058124 ACACCGATCGAATAATGTCCATG 58.942 43.478 18.66 0.00 0.00 3.66
165 166 4.336889 ACACCGATCGAATAATGTCCAT 57.663 40.909 18.66 0.00 0.00 3.41
166 167 3.812156 ACACCGATCGAATAATGTCCA 57.188 42.857 18.66 0.00 0.00 4.02
167 168 6.157211 AGAATACACCGATCGAATAATGTCC 58.843 40.000 18.66 6.13 0.00 4.02
168 169 7.639162 AAGAATACACCGATCGAATAATGTC 57.361 36.000 18.66 5.63 0.00 3.06
169 170 7.709182 TGAAAGAATACACCGATCGAATAATGT 59.291 33.333 18.66 14.13 0.00 2.71
170 171 8.072238 TGAAAGAATACACCGATCGAATAATG 57.928 34.615 18.66 8.99 0.00 1.90
171 172 8.657074 TTGAAAGAATACACCGATCGAATAAT 57.343 30.769 18.66 1.83 0.00 1.28
172 173 8.481974 TTTGAAAGAATACACCGATCGAATAA 57.518 30.769 18.66 0.00 0.00 1.40
173 174 8.657074 ATTTGAAAGAATACACCGATCGAATA 57.343 30.769 18.66 6.04 0.00 1.75
174 175 6.978343 TTTGAAAGAATACACCGATCGAAT 57.022 33.333 18.66 0.52 0.00 3.34
175 176 6.978343 ATTTGAAAGAATACACCGATCGAA 57.022 33.333 18.66 0.00 0.00 3.71
176 177 6.592220 TGAATTTGAAAGAATACACCGATCGA 59.408 34.615 18.66 0.00 0.00 3.59
177 178 6.771076 TGAATTTGAAAGAATACACCGATCG 58.229 36.000 8.51 8.51 0.00 3.69
178 179 8.397906 TCATGAATTTGAAAGAATACACCGATC 58.602 33.333 0.00 0.00 0.00 3.69
179 180 8.279970 TCATGAATTTGAAAGAATACACCGAT 57.720 30.769 0.00 0.00 0.00 4.18
180 181 7.680442 TCATGAATTTGAAAGAATACACCGA 57.320 32.000 0.00 0.00 0.00 4.69
181 182 8.915871 AATCATGAATTTGAAAGAATACACCG 57.084 30.769 0.00 0.00 0.00 4.94
260 261 9.028284 AGAACCAACATCACATCTTGAATTATT 57.972 29.630 0.00 0.00 37.92 1.40
261 262 8.585471 AGAACCAACATCACATCTTGAATTAT 57.415 30.769 0.00 0.00 37.92 1.28
262 263 7.148423 CGAGAACCAACATCACATCTTGAATTA 60.148 37.037 0.00 0.00 37.92 1.40
263 264 6.348786 CGAGAACCAACATCACATCTTGAATT 60.349 38.462 0.00 0.00 37.92 2.17
264 265 5.122869 CGAGAACCAACATCACATCTTGAAT 59.877 40.000 0.00 0.00 37.92 2.57
265 266 4.452114 CGAGAACCAACATCACATCTTGAA 59.548 41.667 0.00 0.00 37.92 2.69
266 267 3.996363 CGAGAACCAACATCACATCTTGA 59.004 43.478 0.00 0.00 39.11 3.02
267 268 3.425359 GCGAGAACCAACATCACATCTTG 60.425 47.826 0.00 0.00 0.00 3.02
268 269 2.744202 GCGAGAACCAACATCACATCTT 59.256 45.455 0.00 0.00 0.00 2.40
269 270 2.027745 AGCGAGAACCAACATCACATCT 60.028 45.455 0.00 0.00 0.00 2.90
270 271 2.350522 AGCGAGAACCAACATCACATC 58.649 47.619 0.00 0.00 0.00 3.06
271 272 2.479566 AGCGAGAACCAACATCACAT 57.520 45.000 0.00 0.00 0.00 3.21
272 273 1.872952 CAAGCGAGAACCAACATCACA 59.127 47.619 0.00 0.00 0.00 3.58
273 274 1.873591 ACAAGCGAGAACCAACATCAC 59.126 47.619 0.00 0.00 0.00 3.06
274 275 2.254546 ACAAGCGAGAACCAACATCA 57.745 45.000 0.00 0.00 0.00 3.07
275 276 4.946784 AATACAAGCGAGAACCAACATC 57.053 40.909 0.00 0.00 0.00 3.06
276 277 5.705609 AAAATACAAGCGAGAACCAACAT 57.294 34.783 0.00 0.00 0.00 2.71
277 278 6.621316 TTAAAATACAAGCGAGAACCAACA 57.379 33.333 0.00 0.00 0.00 3.33
278 279 8.515473 AATTTAAAATACAAGCGAGAACCAAC 57.485 30.769 0.00 0.00 0.00 3.77
317 318 9.502091 TGCTAAGAAAAACTACAATGTGTATCT 57.498 29.630 0.00 0.00 31.66 1.98
321 322 9.284968 ACTATGCTAAGAAAAACTACAATGTGT 57.715 29.630 0.00 0.00 0.00 3.72
332 333 9.950680 GCTGCAATTATACTATGCTAAGAAAAA 57.049 29.630 0.00 0.00 40.66 1.94
333 334 9.342308 AGCTGCAATTATACTATGCTAAGAAAA 57.658 29.630 1.02 0.00 40.66 2.29
334 335 8.777413 CAGCTGCAATTATACTATGCTAAGAAA 58.223 33.333 0.00 0.00 40.66 2.52
335 336 7.095060 GCAGCTGCAATTATACTATGCTAAGAA 60.095 37.037 33.36 0.00 40.66 2.52
336 337 6.369890 GCAGCTGCAATTATACTATGCTAAGA 59.630 38.462 33.36 0.00 40.66 2.10
337 338 6.402983 GGCAGCTGCAATTATACTATGCTAAG 60.403 42.308 37.63 0.00 44.36 2.18
338 339 5.412594 GGCAGCTGCAATTATACTATGCTAA 59.587 40.000 37.63 0.00 44.36 3.09
339 340 4.937620 GGCAGCTGCAATTATACTATGCTA 59.062 41.667 37.63 0.00 44.36 3.49
340 341 3.755378 GGCAGCTGCAATTATACTATGCT 59.245 43.478 37.63 0.00 44.36 3.79
341 342 3.755378 AGGCAGCTGCAATTATACTATGC 59.245 43.478 37.63 16.81 44.36 3.14
342 343 8.899427 ATATAGGCAGCTGCAATTATACTATG 57.101 34.615 37.63 0.00 44.36 2.23
343 344 9.988815 GTATATAGGCAGCTGCAATTATACTAT 57.011 33.333 37.63 30.02 44.36 2.12
344 345 8.977412 TGTATATAGGCAGCTGCAATTATACTA 58.023 33.333 34.37 27.69 44.36 1.82
345 346 7.851228 TGTATATAGGCAGCTGCAATTATACT 58.149 34.615 34.37 26.89 44.36 2.12
346 347 8.668510 ATGTATATAGGCAGCTGCAATTATAC 57.331 34.615 37.63 33.93 44.36 1.47
349 350 9.764363 GTATATGTATATAGGCAGCTGCAATTA 57.236 33.333 37.63 25.79 44.36 1.40
350 351 8.267183 TGTATATGTATATAGGCAGCTGCAATT 58.733 33.333 37.63 24.58 44.36 2.32
351 352 7.795047 TGTATATGTATATAGGCAGCTGCAAT 58.205 34.615 37.63 30.02 44.36 3.56
352 353 7.181569 TGTATATGTATATAGGCAGCTGCAA 57.818 36.000 37.63 26.02 44.36 4.08
353 354 6.790232 TGTATATGTATATAGGCAGCTGCA 57.210 37.500 37.63 20.97 44.36 4.41
354 355 8.360390 TGTATGTATATGTATATAGGCAGCTGC 58.640 37.037 30.88 30.88 41.14 5.25
355 356 9.684448 GTGTATGTATATGTATATAGGCAGCTG 57.316 37.037 10.11 10.11 0.00 4.24
356 357 9.647918 AGTGTATGTATATGTATATAGGCAGCT 57.352 33.333 0.00 0.00 0.00 4.24
379 380 4.570369 TGCATGTATTCACACGGAATAGTG 59.430 41.667 0.00 0.00 46.42 2.74
380 381 4.765273 TGCATGTATTCACACGGAATAGT 58.235 39.130 0.00 0.00 46.42 2.12
381 382 5.929697 ATGCATGTATTCACACGGAATAG 57.070 39.130 0.00 0.00 46.42 1.73
382 383 6.593770 GGATATGCATGTATTCACACGGAATA 59.406 38.462 10.16 0.00 44.38 1.75
384 385 4.754618 GGATATGCATGTATTCACACGGAA 59.245 41.667 10.16 0.00 37.54 4.30
385 386 4.314961 GGATATGCATGTATTCACACGGA 58.685 43.478 10.16 0.00 37.54 4.69
386 387 3.436704 GGGATATGCATGTATTCACACGG 59.563 47.826 10.16 0.00 37.54 4.94
387 388 3.436704 GGGGATATGCATGTATTCACACG 59.563 47.826 10.16 0.00 37.54 4.49
388 389 4.655963 AGGGGATATGCATGTATTCACAC 58.344 43.478 10.16 0.00 37.54 3.82
389 390 4.999469 AGGGGATATGCATGTATTCACA 57.001 40.909 10.16 0.00 39.52 3.58
390 391 6.653020 TCATAGGGGATATGCATGTATTCAC 58.347 40.000 10.16 0.00 41.04 3.18
391 392 6.633355 GCTCATAGGGGATATGCATGTATTCA 60.633 42.308 10.16 0.00 41.04 2.57
392 393 5.762218 GCTCATAGGGGATATGCATGTATTC 59.238 44.000 10.16 0.93 41.04 1.75
393 394 5.192321 TGCTCATAGGGGATATGCATGTATT 59.808 40.000 10.16 0.00 41.04 1.89
394 395 4.723285 TGCTCATAGGGGATATGCATGTAT 59.277 41.667 10.16 0.82 41.04 2.29
395 396 4.080919 GTGCTCATAGGGGATATGCATGTA 60.081 45.833 10.16 0.00 41.04 2.29
396 397 2.914941 TGCTCATAGGGGATATGCATGT 59.085 45.455 10.16 1.23 41.04 3.21
397 398 3.054582 AGTGCTCATAGGGGATATGCATG 60.055 47.826 10.16 0.00 41.04 4.06
398 399 3.187942 AGTGCTCATAGGGGATATGCAT 58.812 45.455 3.79 3.79 41.04 3.96
399 400 2.624495 AGTGCTCATAGGGGATATGCA 58.376 47.619 0.00 0.00 41.04 3.96
400 401 3.604582 GAAGTGCTCATAGGGGATATGC 58.395 50.000 0.00 0.00 41.04 3.14
401 402 3.368843 CGGAAGTGCTCATAGGGGATATG 60.369 52.174 0.00 0.00 42.40 1.78
402 403 2.834549 CGGAAGTGCTCATAGGGGATAT 59.165 50.000 0.00 0.00 0.00 1.63
403 404 2.158370 TCGGAAGTGCTCATAGGGGATA 60.158 50.000 0.00 0.00 0.00 2.59
404 405 1.051812 CGGAAGTGCTCATAGGGGAT 58.948 55.000 0.00 0.00 0.00 3.85
405 406 0.032515 TCGGAAGTGCTCATAGGGGA 60.033 55.000 0.00 0.00 0.00 4.81
406 407 0.390860 CTCGGAAGTGCTCATAGGGG 59.609 60.000 0.00 0.00 0.00 4.79
407 408 1.403814 TCTCGGAAGTGCTCATAGGG 58.596 55.000 0.00 0.00 0.00 3.53
408 409 3.823873 AGTATCTCGGAAGTGCTCATAGG 59.176 47.826 0.00 0.00 0.00 2.57
409 410 4.517075 TCAGTATCTCGGAAGTGCTCATAG 59.483 45.833 0.00 0.00 0.00 2.23
410 411 4.461198 TCAGTATCTCGGAAGTGCTCATA 58.539 43.478 0.00 0.00 0.00 2.15
411 412 3.291584 TCAGTATCTCGGAAGTGCTCAT 58.708 45.455 0.00 0.00 0.00 2.90
412 413 2.723273 TCAGTATCTCGGAAGTGCTCA 58.277 47.619 0.00 0.00 0.00 4.26
413 414 3.440228 GTTCAGTATCTCGGAAGTGCTC 58.560 50.000 0.00 0.00 31.56 4.26
414 415 2.166664 GGTTCAGTATCTCGGAAGTGCT 59.833 50.000 0.00 0.00 31.56 4.40
415 416 2.541556 GGTTCAGTATCTCGGAAGTGC 58.458 52.381 0.00 0.00 31.56 4.40
416 417 2.422479 TCGGTTCAGTATCTCGGAAGTG 59.578 50.000 0.00 0.00 31.56 3.16
417 418 2.422832 GTCGGTTCAGTATCTCGGAAGT 59.577 50.000 0.00 0.00 31.56 3.01
418 419 2.422479 TGTCGGTTCAGTATCTCGGAAG 59.578 50.000 0.00 0.00 31.56 3.46
419 420 2.439409 TGTCGGTTCAGTATCTCGGAA 58.561 47.619 0.00 0.00 0.00 4.30
420 421 2.118313 TGTCGGTTCAGTATCTCGGA 57.882 50.000 0.00 0.00 0.00 4.55
421 422 2.357952 TGATGTCGGTTCAGTATCTCGG 59.642 50.000 0.00 0.00 0.00 4.63
422 423 3.364062 GTGATGTCGGTTCAGTATCTCG 58.636 50.000 0.00 0.00 0.00 4.04
423 424 3.181499 ACGTGATGTCGGTTCAGTATCTC 60.181 47.826 0.00 0.00 34.94 2.75
424 425 2.753452 ACGTGATGTCGGTTCAGTATCT 59.247 45.455 0.00 0.00 34.94 1.98
425 426 3.106672 GACGTGATGTCGGTTCAGTATC 58.893 50.000 0.00 0.00 37.96 2.24
426 427 3.146618 GACGTGATGTCGGTTCAGTAT 57.853 47.619 0.00 0.00 37.96 2.12
427 428 2.624316 GACGTGATGTCGGTTCAGTA 57.376 50.000 0.00 0.00 37.96 2.74
428 429 3.491581 GACGTGATGTCGGTTCAGT 57.508 52.632 0.00 0.00 37.96 3.41
444 445 4.690748 TGGTGAATTCGTCAATCTCAAGAC 59.309 41.667 0.04 0.00 38.23 3.01
445 446 4.690748 GTGGTGAATTCGTCAATCTCAAGA 59.309 41.667 0.04 0.00 38.23 3.02
446 447 4.452114 TGTGGTGAATTCGTCAATCTCAAG 59.548 41.667 0.04 0.00 38.23 3.02
447 448 4.384940 TGTGGTGAATTCGTCAATCTCAA 58.615 39.130 0.04 0.00 38.23 3.02
448 449 3.996363 CTGTGGTGAATTCGTCAATCTCA 59.004 43.478 0.04 0.00 38.23 3.27
449 450 3.372206 CCTGTGGTGAATTCGTCAATCTC 59.628 47.826 0.04 0.00 38.23 2.75
450 451 3.338249 CCTGTGGTGAATTCGTCAATCT 58.662 45.455 0.04 0.00 38.23 2.40
451 452 2.159517 GCCTGTGGTGAATTCGTCAATC 60.160 50.000 0.04 0.00 38.23 2.67
452 453 1.812571 GCCTGTGGTGAATTCGTCAAT 59.187 47.619 0.04 0.00 38.23 2.57
453 454 1.234821 GCCTGTGGTGAATTCGTCAA 58.765 50.000 0.04 0.00 38.23 3.18
454 455 0.107643 TGCCTGTGGTGAATTCGTCA 59.892 50.000 0.04 0.00 0.00 4.35
455 456 0.517316 GTGCCTGTGGTGAATTCGTC 59.483 55.000 0.04 0.00 0.00 4.20
456 457 0.889186 GGTGCCTGTGGTGAATTCGT 60.889 55.000 0.04 0.00 0.00 3.85
457 458 0.606401 AGGTGCCTGTGGTGAATTCG 60.606 55.000 0.04 0.00 0.00 3.34
458 459 1.168714 GAGGTGCCTGTGGTGAATTC 58.831 55.000 0.00 0.00 0.00 2.17
459 460 0.606401 CGAGGTGCCTGTGGTGAATT 60.606 55.000 0.00 0.00 0.00 2.17
460 461 1.003355 CGAGGTGCCTGTGGTGAAT 60.003 57.895 0.00 0.00 0.00 2.57
461 462 1.116536 TACGAGGTGCCTGTGGTGAA 61.117 55.000 0.00 0.00 0.00 3.18
462 463 1.532078 TACGAGGTGCCTGTGGTGA 60.532 57.895 0.00 0.00 0.00 4.02
463 464 1.079819 CTACGAGGTGCCTGTGGTG 60.080 63.158 0.00 0.00 0.00 4.17
464 465 1.533273 ACTACGAGGTGCCTGTGGT 60.533 57.895 0.00 0.24 0.00 4.16
465 466 1.215647 GACTACGAGGTGCCTGTGG 59.784 63.158 0.00 0.00 0.00 4.17
466 467 1.154016 CGACTACGAGGTGCCTGTG 60.154 63.158 0.00 0.00 42.66 3.66
467 468 1.303074 TCGACTACGAGGTGCCTGT 60.303 57.895 0.00 0.00 43.81 4.00
468 469 3.587095 TCGACTACGAGGTGCCTG 58.413 61.111 0.00 0.00 43.81 4.85
488 489 4.651503 TCATTTAGTGGGAGGAGATGTCTC 59.348 45.833 1.33 1.33 42.14 3.36
489 490 4.624913 TCATTTAGTGGGAGGAGATGTCT 58.375 43.478 0.00 0.00 0.00 3.41
490 491 5.119694 GTTCATTTAGTGGGAGGAGATGTC 58.880 45.833 0.00 0.00 0.00 3.06
491 492 4.536090 TGTTCATTTAGTGGGAGGAGATGT 59.464 41.667 0.00 0.00 0.00 3.06
492 493 5.102953 TGTTCATTTAGTGGGAGGAGATG 57.897 43.478 0.00 0.00 0.00 2.90
493 494 5.453903 CGATGTTCATTTAGTGGGAGGAGAT 60.454 44.000 0.00 0.00 0.00 2.75
494 495 4.141937 CGATGTTCATTTAGTGGGAGGAGA 60.142 45.833 0.00 0.00 0.00 3.71
495 496 4.122776 CGATGTTCATTTAGTGGGAGGAG 58.877 47.826 0.00 0.00 0.00 3.69
496 497 3.517901 ACGATGTTCATTTAGTGGGAGGA 59.482 43.478 0.00 0.00 0.00 3.71
497 498 3.873910 ACGATGTTCATTTAGTGGGAGG 58.126 45.455 0.00 0.00 0.00 4.30
498 499 4.935205 TCAACGATGTTCATTTAGTGGGAG 59.065 41.667 0.00 0.00 0.00 4.30
499 500 4.900684 TCAACGATGTTCATTTAGTGGGA 58.099 39.130 0.00 0.00 0.00 4.37
500 501 5.818136 ATCAACGATGTTCATTTAGTGGG 57.182 39.130 0.00 0.00 0.00 4.61
501 502 6.907212 GCTTATCAACGATGTTCATTTAGTGG 59.093 38.462 0.00 0.00 0.00 4.00
502 503 6.907212 GGCTTATCAACGATGTTCATTTAGTG 59.093 38.462 0.00 0.00 0.00 2.74
503 504 6.823689 AGGCTTATCAACGATGTTCATTTAGT 59.176 34.615 0.00 0.00 0.00 2.24
504 505 7.128331 CAGGCTTATCAACGATGTTCATTTAG 58.872 38.462 0.00 0.00 0.00 1.85
505 506 6.038161 CCAGGCTTATCAACGATGTTCATTTA 59.962 38.462 0.00 0.00 0.00 1.40
506 507 5.163622 CCAGGCTTATCAACGATGTTCATTT 60.164 40.000 0.00 0.00 0.00 2.32
507 508 4.336433 CCAGGCTTATCAACGATGTTCATT 59.664 41.667 0.00 0.00 0.00 2.57
508 509 3.879295 CCAGGCTTATCAACGATGTTCAT 59.121 43.478 0.00 0.00 0.00 2.57
509 510 3.055458 TCCAGGCTTATCAACGATGTTCA 60.055 43.478 0.00 0.00 0.00 3.18
510 511 3.531538 TCCAGGCTTATCAACGATGTTC 58.468 45.455 0.00 0.00 0.00 3.18
511 512 3.627395 TCCAGGCTTATCAACGATGTT 57.373 42.857 0.00 0.00 0.00 2.71
512 513 3.627395 TTCCAGGCTTATCAACGATGT 57.373 42.857 0.00 0.00 0.00 3.06
513 514 6.618287 TTATTTCCAGGCTTATCAACGATG 57.382 37.500 0.00 0.00 0.00 3.84
514 515 7.823745 AATTATTTCCAGGCTTATCAACGAT 57.176 32.000 0.00 0.00 0.00 3.73
515 516 7.338196 TCAAATTATTTCCAGGCTTATCAACGA 59.662 33.333 0.00 0.00 0.00 3.85
516 517 7.479980 TCAAATTATTTCCAGGCTTATCAACG 58.520 34.615 0.00 0.00 0.00 4.10
517 518 9.651913 TTTCAAATTATTTCCAGGCTTATCAAC 57.348 29.630 0.00 0.00 0.00 3.18
543 544 3.527533 TGATACCGCTGCTCGTATTTTT 58.472 40.909 9.65 0.00 36.19 1.94
544 545 3.173668 TGATACCGCTGCTCGTATTTT 57.826 42.857 9.65 0.00 36.19 1.82
545 546 2.882927 TGATACCGCTGCTCGTATTT 57.117 45.000 9.65 0.00 36.19 1.40
546 547 2.100916 ACTTGATACCGCTGCTCGTATT 59.899 45.455 9.65 0.00 36.19 1.89
547 548 1.681793 ACTTGATACCGCTGCTCGTAT 59.318 47.619 8.45 8.45 36.19 3.06
548 549 1.100510 ACTTGATACCGCTGCTCGTA 58.899 50.000 0.00 0.00 36.19 3.43
549 550 0.246635 AACTTGATACCGCTGCTCGT 59.753 50.000 0.00 0.00 36.19 4.18
550 551 1.359848 AAACTTGATACCGCTGCTCG 58.640 50.000 0.00 0.00 38.08 5.03
551 552 2.866762 CCTAAACTTGATACCGCTGCTC 59.133 50.000 0.00 0.00 0.00 4.26
552 553 2.500098 TCCTAAACTTGATACCGCTGCT 59.500 45.455 0.00 0.00 0.00 4.24
553 554 2.608090 GTCCTAAACTTGATACCGCTGC 59.392 50.000 0.00 0.00 0.00 5.25
554 555 4.124851 AGTCCTAAACTTGATACCGCTG 57.875 45.455 0.00 0.00 33.03 5.18
555 556 4.820894 AAGTCCTAAACTTGATACCGCT 57.179 40.909 0.00 0.00 46.61 5.52
565 566 4.461198 CACAAGGGTTCAAGTCCTAAACT 58.539 43.478 0.00 0.00 41.10 2.66
566 567 3.568430 CCACAAGGGTTCAAGTCCTAAAC 59.432 47.826 0.00 0.00 32.21 2.01
567 568 3.827722 CCACAAGGGTTCAAGTCCTAAA 58.172 45.455 0.00 0.00 32.21 1.85
568 569 3.502123 CCACAAGGGTTCAAGTCCTAA 57.498 47.619 0.00 0.00 32.21 2.69
581 582 1.256812 GATGGAACCAACCCACAAGG 58.743 55.000 0.00 0.00 43.78 3.61
582 583 1.613437 GTGATGGAACCAACCCACAAG 59.387 52.381 14.53 0.00 36.36 3.16
583 584 1.063642 TGTGATGGAACCAACCCACAA 60.064 47.619 17.60 7.74 36.36 3.33
584 585 0.553333 TGTGATGGAACCAACCCACA 59.447 50.000 16.66 16.66 36.36 4.17
585 586 1.613437 CTTGTGATGGAACCAACCCAC 59.387 52.381 13.35 13.35 36.36 4.61
586 587 1.480312 CCTTGTGATGGAACCAACCCA 60.480 52.381 0.00 0.00 38.19 4.51
587 588 1.203001 TCCTTGTGATGGAACCAACCC 60.203 52.381 0.00 0.00 0.00 4.11
588 589 2.286365 TCCTTGTGATGGAACCAACC 57.714 50.000 0.00 0.00 0.00 3.77
594 595 3.396276 TGGTTAGGTTCCTTGTGATGGAA 59.604 43.478 0.00 0.00 40.85 3.53
595 596 2.983192 TGGTTAGGTTCCTTGTGATGGA 59.017 45.455 0.00 0.00 0.00 3.41
596 597 3.433306 TGGTTAGGTTCCTTGTGATGG 57.567 47.619 0.00 0.00 0.00 3.51
597 598 8.210946 TCTTATATGGTTAGGTTCCTTGTGATG 58.789 37.037 0.00 0.00 0.00 3.07
598 599 8.331931 TCTTATATGGTTAGGTTCCTTGTGAT 57.668 34.615 0.00 0.00 0.00 3.06
599 600 7.743116 TCTTATATGGTTAGGTTCCTTGTGA 57.257 36.000 0.00 0.00 0.00 3.58
600 601 9.490379 GTATCTTATATGGTTAGGTTCCTTGTG 57.510 37.037 0.00 0.00 0.00 3.33
601 602 9.220906 TGTATCTTATATGGTTAGGTTCCTTGT 57.779 33.333 0.00 0.00 0.00 3.16
602 603 9.490379 GTGTATCTTATATGGTTAGGTTCCTTG 57.510 37.037 0.00 0.00 0.00 3.61
603 604 9.220906 TGTGTATCTTATATGGTTAGGTTCCTT 57.779 33.333 0.00 0.00 0.00 3.36
604 605 8.792830 TGTGTATCTTATATGGTTAGGTTCCT 57.207 34.615 0.00 0.00 0.00 3.36
605 606 9.436957 CATGTGTATCTTATATGGTTAGGTTCC 57.563 37.037 0.00 0.00 0.00 3.62
606 607 9.998106 ACATGTGTATCTTATATGGTTAGGTTC 57.002 33.333 0.00 0.00 0.00 3.62
625 626 9.698309 GCAGAATGTATATCTAACTACATGTGT 57.302 33.333 9.11 1.62 38.31 3.72
626 627 9.696917 TGCAGAATGTATATCTAACTACATGTG 57.303 33.333 9.11 0.93 38.31 3.21
627 628 9.698309 GTGCAGAATGTATATCTAACTACATGT 57.302 33.333 2.69 2.69 38.31 3.21
628 629 9.696917 TGTGCAGAATGTATATCTAACTACATG 57.303 33.333 0.00 0.00 38.31 3.21
629 630 9.698309 GTGTGCAGAATGTATATCTAACTACAT 57.302 33.333 0.00 0.00 39.61 2.29
630 631 8.691797 TGTGTGCAGAATGTATATCTAACTACA 58.308 33.333 0.00 0.00 39.31 2.74
631 632 8.969267 GTGTGTGCAGAATGTATATCTAACTAC 58.031 37.037 0.00 0.00 39.31 2.73
632 633 8.141909 GGTGTGTGCAGAATGTATATCTAACTA 58.858 37.037 0.00 0.00 39.31 2.24
633 634 6.986817 GGTGTGTGCAGAATGTATATCTAACT 59.013 38.462 0.00 0.00 39.31 2.24
634 635 6.074302 CGGTGTGTGCAGAATGTATATCTAAC 60.074 42.308 0.00 0.00 39.31 2.34
635 636 5.983118 CGGTGTGTGCAGAATGTATATCTAA 59.017 40.000 0.00 0.00 39.31 2.10
636 637 5.068591 ACGGTGTGTGCAGAATGTATATCTA 59.931 40.000 0.00 0.00 39.31 1.98
637 638 4.141937 ACGGTGTGTGCAGAATGTATATCT 60.142 41.667 0.00 0.00 39.31 1.98
638 639 4.119862 ACGGTGTGTGCAGAATGTATATC 58.880 43.478 0.00 0.00 39.31 1.63
639 640 4.137116 ACGGTGTGTGCAGAATGTATAT 57.863 40.909 0.00 0.00 39.31 0.86
640 641 3.603158 ACGGTGTGTGCAGAATGTATA 57.397 42.857 0.00 0.00 39.31 1.47
641 642 2.472695 ACGGTGTGTGCAGAATGTAT 57.527 45.000 0.00 0.00 39.31 2.29
642 643 1.870402 CAACGGTGTGTGCAGAATGTA 59.130 47.619 0.00 0.00 39.31 2.29
643 644 0.662619 CAACGGTGTGTGCAGAATGT 59.337 50.000 0.00 0.00 39.31 2.71
644 645 0.040157 CCAACGGTGTGTGCAGAATG 60.040 55.000 0.00 0.00 40.87 2.67
645 646 0.465460 ACCAACGGTGTGTGCAGAAT 60.465 50.000 0.00 0.00 32.98 2.40
646 647 0.178301 TACCAACGGTGTGTGCAGAA 59.822 50.000 0.00 0.00 36.19 3.02
647 648 0.394938 ATACCAACGGTGTGTGCAGA 59.605 50.000 0.00 0.00 36.19 4.26
648 649 0.516877 CATACCAACGGTGTGTGCAG 59.483 55.000 0.00 0.00 39.46 4.41
649 650 1.511318 GCATACCAACGGTGTGTGCA 61.511 55.000 15.85 0.00 44.82 4.57
650 651 1.209127 GCATACCAACGGTGTGTGC 59.791 57.895 10.99 4.37 44.82 4.57
651 652 1.730064 GTAGCATACCAACGGTGTGTG 59.270 52.381 10.99 0.00 44.82 3.82
652 653 2.088950 GTAGCATACCAACGGTGTGT 57.911 50.000 10.99 0.00 44.82 3.72
663 664 6.771749 TCTCTTTGAGTACCTAGGTAGCATAC 59.228 42.308 22.37 12.61 42.04 2.39
664 665 6.907961 TCTCTTTGAGTACCTAGGTAGCATA 58.092 40.000 22.37 15.76 0.00 3.14
665 666 5.767670 TCTCTTTGAGTACCTAGGTAGCAT 58.232 41.667 22.37 11.13 0.00 3.79
666 667 5.188988 TCTCTTTGAGTACCTAGGTAGCA 57.811 43.478 22.37 19.04 0.00 3.49
667 668 6.527057 TTTCTCTTTGAGTACCTAGGTAGC 57.473 41.667 22.37 16.76 0.00 3.58
668 669 7.363968 CCCTTTTCTCTTTGAGTACCTAGGTAG 60.364 44.444 22.37 11.21 0.00 3.18
669 670 6.439692 CCCTTTTCTCTTTGAGTACCTAGGTA 59.560 42.308 18.10 18.10 0.00 3.08
670 671 5.248705 CCCTTTTCTCTTTGAGTACCTAGGT 59.751 44.000 20.57 20.57 0.00 3.08
671 672 5.248705 ACCCTTTTCTCTTTGAGTACCTAGG 59.751 44.000 7.41 7.41 0.00 3.02
672 673 6.361768 ACCCTTTTCTCTTTGAGTACCTAG 57.638 41.667 0.00 0.00 0.00 3.02
673 674 6.758806 AACCCTTTTCTCTTTGAGTACCTA 57.241 37.500 0.00 0.00 0.00 3.08
674 675 5.648330 AACCCTTTTCTCTTTGAGTACCT 57.352 39.130 0.00 0.00 0.00 3.08
675 676 5.826208 TCAAACCCTTTTCTCTTTGAGTACC 59.174 40.000 0.00 0.00 30.83 3.34
676 677 6.937436 TCAAACCCTTTTCTCTTTGAGTAC 57.063 37.500 0.00 0.00 30.83 2.73
677 678 9.807921 ATTATCAAACCCTTTTCTCTTTGAGTA 57.192 29.630 0.00 0.00 36.37 2.59
678 679 8.712228 ATTATCAAACCCTTTTCTCTTTGAGT 57.288 30.769 0.00 0.00 36.37 3.41
679 680 9.018582 AGATTATCAAACCCTTTTCTCTTTGAG 57.981 33.333 0.00 0.00 36.37 3.02
680 681 8.940397 AGATTATCAAACCCTTTTCTCTTTGA 57.060 30.769 0.00 0.00 37.12 2.69
681 682 9.987272 AAAGATTATCAAACCCTTTTCTCTTTG 57.013 29.630 0.00 0.00 30.45 2.77
683 684 9.593565 AGAAAGATTATCAAACCCTTTTCTCTT 57.406 29.630 0.00 0.00 0.00 2.85
684 685 9.593565 AAGAAAGATTATCAAACCCTTTTCTCT 57.406 29.630 0.00 0.00 0.00 3.10
685 686 9.847706 GAAGAAAGATTATCAAACCCTTTTCTC 57.152 33.333 0.00 0.00 0.00 2.87
686 687 8.807118 GGAAGAAAGATTATCAAACCCTTTTCT 58.193 33.333 0.00 0.00 0.00 2.52
687 688 7.755373 CGGAAGAAAGATTATCAAACCCTTTTC 59.245 37.037 0.00 0.00 0.00 2.29
688 689 7.232737 ACGGAAGAAAGATTATCAAACCCTTTT 59.767 33.333 0.00 0.00 0.00 2.27
689 690 6.719829 ACGGAAGAAAGATTATCAAACCCTTT 59.280 34.615 0.00 0.00 0.00 3.11
690 691 6.151144 CACGGAAGAAAGATTATCAAACCCTT 59.849 38.462 0.00 0.00 0.00 3.95
691 692 5.648092 CACGGAAGAAAGATTATCAAACCCT 59.352 40.000 0.00 0.00 0.00 4.34
692 693 5.414765 ACACGGAAGAAAGATTATCAAACCC 59.585 40.000 0.00 0.00 0.00 4.11
693 694 6.496338 ACACGGAAGAAAGATTATCAAACC 57.504 37.500 0.00 0.00 0.00 3.27
696 697 9.443323 TGATTAACACGGAAGAAAGATTATCAA 57.557 29.630 0.00 0.00 0.00 2.57
697 698 9.613428 ATGATTAACACGGAAGAAAGATTATCA 57.387 29.630 0.00 0.00 0.00 2.15
699 700 9.613428 TGATGATTAACACGGAAGAAAGATTAT 57.387 29.630 0.00 0.00 0.00 1.28
700 701 9.613428 ATGATGATTAACACGGAAGAAAGATTA 57.387 29.630 0.00 0.00 0.00 1.75
701 702 7.921786 TGATGATTAACACGGAAGAAAGATT 57.078 32.000 0.00 0.00 0.00 2.40
702 703 8.400947 CAATGATGATTAACACGGAAGAAAGAT 58.599 33.333 0.00 0.00 0.00 2.40
703 704 7.148255 CCAATGATGATTAACACGGAAGAAAGA 60.148 37.037 0.00 0.00 0.00 2.52
704 705 6.968904 CCAATGATGATTAACACGGAAGAAAG 59.031 38.462 0.00 0.00 0.00 2.62
705 706 6.432783 ACCAATGATGATTAACACGGAAGAAA 59.567 34.615 0.00 0.00 0.00 2.52
706 707 5.943416 ACCAATGATGATTAACACGGAAGAA 59.057 36.000 0.00 0.00 0.00 2.52
707 708 5.353956 CACCAATGATGATTAACACGGAAGA 59.646 40.000 0.00 0.00 0.00 2.87
708 709 5.123820 ACACCAATGATGATTAACACGGAAG 59.876 40.000 0.00 0.00 0.00 3.46
709 710 5.007034 ACACCAATGATGATTAACACGGAA 58.993 37.500 0.00 0.00 0.00 4.30
710 711 4.584874 ACACCAATGATGATTAACACGGA 58.415 39.130 0.00 0.00 0.00 4.69
711 712 4.963276 ACACCAATGATGATTAACACGG 57.037 40.909 0.00 0.00 0.00 4.94
712 713 7.919690 AGATTACACCAATGATGATTAACACG 58.080 34.615 0.00 0.00 0.00 4.49
718 719 9.466497 AGTACAAAGATTACACCAATGATGATT 57.534 29.630 0.00 0.00 0.00 2.57
719 720 8.896744 CAGTACAAAGATTACACCAATGATGAT 58.103 33.333 0.00 0.00 0.00 2.45
720 721 7.148255 GCAGTACAAAGATTACACCAATGATGA 60.148 37.037 0.00 0.00 0.00 2.92
721 722 6.968904 GCAGTACAAAGATTACACCAATGATG 59.031 38.462 0.00 0.00 0.00 3.07
722 723 6.658816 TGCAGTACAAAGATTACACCAATGAT 59.341 34.615 0.00 0.00 0.00 2.45
723 724 6.000840 TGCAGTACAAAGATTACACCAATGA 58.999 36.000 0.00 0.00 0.00 2.57
724 725 6.252967 TGCAGTACAAAGATTACACCAATG 57.747 37.500 0.00 0.00 0.00 2.82
725 726 7.466746 AATGCAGTACAAAGATTACACCAAT 57.533 32.000 0.00 0.00 0.00 3.16
726 727 6.892658 AATGCAGTACAAAGATTACACCAA 57.107 33.333 0.00 0.00 0.00 3.67
727 728 6.714810 AGAAATGCAGTACAAAGATTACACCA 59.285 34.615 0.00 0.00 0.00 4.17
728 729 7.145932 AGAAATGCAGTACAAAGATTACACC 57.854 36.000 0.00 0.00 0.00 4.16
759 760 9.685005 CGTCAGTTATTGCTGTTAAATACTTAC 57.315 33.333 0.00 0.00 37.70 2.34
760 761 9.426837 ACGTCAGTTATTGCTGTTAAATACTTA 57.573 29.630 0.00 0.00 37.70 2.24
761 762 8.319143 ACGTCAGTTATTGCTGTTAAATACTT 57.681 30.769 0.00 0.00 37.70 2.24
762 763 7.900782 ACGTCAGTTATTGCTGTTAAATACT 57.099 32.000 0.00 0.00 37.70 2.12
763 764 8.225107 TCAACGTCAGTTATTGCTGTTAAATAC 58.775 33.333 0.00 0.00 38.79 1.89
764 765 8.312896 TCAACGTCAGTTATTGCTGTTAAATA 57.687 30.769 0.00 0.00 38.79 1.40
765 766 7.197071 TCAACGTCAGTTATTGCTGTTAAAT 57.803 32.000 0.00 0.00 38.79 1.40
766 767 6.606234 TCAACGTCAGTTATTGCTGTTAAA 57.394 33.333 0.00 0.00 38.79 1.52
767 768 6.598525 CATCAACGTCAGTTATTGCTGTTAA 58.401 36.000 0.00 0.00 38.79 2.01
768 769 5.390461 GCATCAACGTCAGTTATTGCTGTTA 60.390 40.000 0.00 0.00 40.89 2.41
769 770 4.613622 GCATCAACGTCAGTTATTGCTGTT 60.614 41.667 0.00 0.00 40.89 3.16
770 771 3.120199 GCATCAACGTCAGTTATTGCTGT 60.120 43.478 0.00 0.00 40.89 4.40
771 772 3.125829 AGCATCAACGTCAGTTATTGCTG 59.874 43.478 14.93 0.00 46.63 4.41
772 773 3.338249 AGCATCAACGTCAGTTATTGCT 58.662 40.909 11.77 11.77 45.16 3.91
773 774 3.125146 TCAGCATCAACGTCAGTTATTGC 59.875 43.478 0.00 8.65 42.69 3.56
774 775 4.926860 TCAGCATCAACGTCAGTTATTG 57.073 40.909 0.00 0.00 38.79 1.90
775 776 5.700832 TCTTTCAGCATCAACGTCAGTTATT 59.299 36.000 0.00 0.00 38.79 1.40
776 777 5.237815 TCTTTCAGCATCAACGTCAGTTAT 58.762 37.500 0.00 0.00 38.79 1.89
777 778 4.627058 TCTTTCAGCATCAACGTCAGTTA 58.373 39.130 0.00 0.00 38.79 2.24
778 779 3.466836 TCTTTCAGCATCAACGTCAGTT 58.533 40.909 0.00 0.00 42.15 3.16
779 780 3.111853 TCTTTCAGCATCAACGTCAGT 57.888 42.857 0.00 0.00 0.00 3.41
780 781 4.472691 TTTCTTTCAGCATCAACGTCAG 57.527 40.909 0.00 0.00 0.00 3.51
781 782 4.891627 TTTTCTTTCAGCATCAACGTCA 57.108 36.364 0.00 0.00 0.00 4.35
800 801 6.572314 GCCCAGCATCAGTTACTGTAATTTTT 60.572 38.462 12.41 0.00 32.61 1.94
801 802 5.105756 GCCCAGCATCAGTTACTGTAATTTT 60.106 40.000 12.41 0.00 32.61 1.82
802 803 4.399303 GCCCAGCATCAGTTACTGTAATTT 59.601 41.667 12.41 0.00 32.61 1.82
803 804 3.947834 GCCCAGCATCAGTTACTGTAATT 59.052 43.478 12.41 0.00 32.61 1.40
804 805 3.545703 GCCCAGCATCAGTTACTGTAAT 58.454 45.455 12.41 0.00 32.61 1.89
805 806 2.355716 GGCCCAGCATCAGTTACTGTAA 60.356 50.000 12.41 0.00 32.61 2.41
806 807 1.209504 GGCCCAGCATCAGTTACTGTA 59.790 52.381 12.41 0.00 32.61 2.74
807 808 0.035056 GGCCCAGCATCAGTTACTGT 60.035 55.000 12.41 0.00 32.61 3.55
808 809 1.091771 CGGCCCAGCATCAGTTACTG 61.092 60.000 5.94 5.94 0.00 2.74
809 810 1.221840 CGGCCCAGCATCAGTTACT 59.778 57.895 0.00 0.00 0.00 2.24
810 811 0.177141 TACGGCCCAGCATCAGTTAC 59.823 55.000 0.00 0.00 0.00 2.50
811 812 0.464036 CTACGGCCCAGCATCAGTTA 59.536 55.000 0.00 0.00 0.00 2.24
812 813 1.221840 CTACGGCCCAGCATCAGTT 59.778 57.895 0.00 0.00 0.00 3.16
813 814 2.903357 CTACGGCCCAGCATCAGT 59.097 61.111 0.00 0.00 0.00 3.41
814 815 2.590007 GCTACGGCCCAGCATCAG 60.590 66.667 17.14 0.00 38.93 2.90
815 816 3.398310 TGCTACGGCCCAGCATCA 61.398 61.111 20.07 1.08 43.90 3.07
818 819 2.669133 AATCTGCTACGGCCCAGCA 61.669 57.895 21.95 21.95 46.47 4.41
819 820 2.182842 CAATCTGCTACGGCCCAGC 61.183 63.158 15.57 15.57 39.56 4.85
820 821 0.811616 GTCAATCTGCTACGGCCCAG 60.812 60.000 0.00 0.00 37.74 4.45
821 822 1.220749 GTCAATCTGCTACGGCCCA 59.779 57.895 0.00 0.00 37.74 5.36
822 823 0.107654 AAGTCAATCTGCTACGGCCC 60.108 55.000 0.00 0.00 37.74 5.80
823 824 2.159085 AGTAAGTCAATCTGCTACGGCC 60.159 50.000 0.00 0.00 37.74 6.13
824 825 3.166489 AGTAAGTCAATCTGCTACGGC 57.834 47.619 0.00 0.00 39.26 5.68
825 826 5.035443 GTGTAGTAAGTCAATCTGCTACGG 58.965 45.833 0.00 0.00 37.81 4.02
826 827 5.739630 CAGTGTAGTAAGTCAATCTGCTACG 59.260 44.000 0.00 0.00 37.81 3.51
827 828 6.853720 TCAGTGTAGTAAGTCAATCTGCTAC 58.146 40.000 0.00 0.00 36.70 3.58
828 829 7.646548 ATCAGTGTAGTAAGTCAATCTGCTA 57.353 36.000 0.00 0.00 0.00 3.49
829 830 5.984695 TCAGTGTAGTAAGTCAATCTGCT 57.015 39.130 0.00 0.00 0.00 4.24
830 831 7.221067 GTGTATCAGTGTAGTAAGTCAATCTGC 59.779 40.741 0.00 0.00 0.00 4.26
831 832 8.244113 TGTGTATCAGTGTAGTAAGTCAATCTG 58.756 37.037 0.00 0.00 0.00 2.90
832 833 8.349568 TGTGTATCAGTGTAGTAAGTCAATCT 57.650 34.615 0.00 0.00 0.00 2.40
833 834 9.025020 CATGTGTATCAGTGTAGTAAGTCAATC 57.975 37.037 0.00 0.00 0.00 2.67
834 835 7.492669 GCATGTGTATCAGTGTAGTAAGTCAAT 59.507 37.037 0.00 0.00 0.00 2.57
835 836 6.811665 GCATGTGTATCAGTGTAGTAAGTCAA 59.188 38.462 0.00 0.00 0.00 3.18
836 837 6.152831 AGCATGTGTATCAGTGTAGTAAGTCA 59.847 38.462 0.00 0.00 0.00 3.41
837 838 6.565234 AGCATGTGTATCAGTGTAGTAAGTC 58.435 40.000 0.00 0.00 0.00 3.01
838 839 6.378564 AGAGCATGTGTATCAGTGTAGTAAGT 59.621 38.462 0.00 0.00 0.00 2.24
839 840 6.800543 AGAGCATGTGTATCAGTGTAGTAAG 58.199 40.000 0.00 0.00 0.00 2.34
840 841 6.377146 TGAGAGCATGTGTATCAGTGTAGTAA 59.623 38.462 0.00 0.00 0.00 2.24
841 842 5.885912 TGAGAGCATGTGTATCAGTGTAGTA 59.114 40.000 0.00 0.00 0.00 1.82
842 843 4.706962 TGAGAGCATGTGTATCAGTGTAGT 59.293 41.667 0.00 0.00 0.00 2.73
843 844 5.254339 TGAGAGCATGTGTATCAGTGTAG 57.746 43.478 0.00 0.00 0.00 2.74
844 845 5.659440 TTGAGAGCATGTGTATCAGTGTA 57.341 39.130 0.00 0.00 0.00 2.90
845 846 4.541973 TTGAGAGCATGTGTATCAGTGT 57.458 40.909 0.00 0.00 0.00 3.55
846 847 5.868043 TTTTGAGAGCATGTGTATCAGTG 57.132 39.130 0.00 0.00 0.00 3.66
910 911 2.158475 GGAAATGGGTGATCATGGCCTA 60.158 50.000 3.32 0.00 0.00 3.93
920 921 1.002624 GCTCGTGGGAAATGGGTGA 60.003 57.895 0.00 0.00 0.00 4.02
921 922 0.893270 TTGCTCGTGGGAAATGGGTG 60.893 55.000 0.00 0.00 0.00 4.61
922 923 0.178975 TTTGCTCGTGGGAAATGGGT 60.179 50.000 0.00 0.00 30.42 4.51
923 924 0.965439 TTTTGCTCGTGGGAAATGGG 59.035 50.000 0.00 0.00 35.29 4.00
924 925 1.336795 GGTTTTGCTCGTGGGAAATGG 60.337 52.381 0.00 0.00 35.29 3.16
925 926 1.339610 TGGTTTTGCTCGTGGGAAATG 59.660 47.619 0.00 0.00 35.29 2.32
926 927 1.698506 TGGTTTTGCTCGTGGGAAAT 58.301 45.000 0.00 0.00 35.29 2.17
927 928 1.475403 TTGGTTTTGCTCGTGGGAAA 58.525 45.000 0.00 0.00 33.51 3.13
960 969 5.898397 GGTGGGGAGAGGTATTATATAGGTC 59.102 48.000 0.00 0.00 0.00 3.85
2948 4094 4.501571 CCACCAACCTACAGATTATCCTCG 60.502 50.000 0.00 0.00 0.00 4.63
2959 4105 3.388676 CCGATAATACCCACCAACCTACA 59.611 47.826 0.00 0.00 0.00 2.74
3429 4593 4.042809 TCATAGCCCACTGAAGGAGAAAAA 59.957 41.667 0.00 0.00 0.00 1.94
3437 4601 4.835615 ACTACCTATCATAGCCCACTGAAG 59.164 45.833 0.00 0.00 0.00 3.02
3455 4619 9.448294 CGTAGTTGACAAAGATAAGATACTACC 57.552 37.037 0.00 0.00 34.65 3.18
3481 4651 0.933097 CATGATGTGGCGCTGTAGTC 59.067 55.000 7.64 0.16 0.00 2.59
3801 4988 1.866853 CGCTTTGGTTGGAGAAGGGC 61.867 60.000 0.00 0.00 0.00 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.