Multiple sequence alignment - TraesCS3B01G006400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G006400 chr3B 100.000 2384 0 0 1 2384 3311290 3308907 0.000000e+00 4403.0
1 TraesCS3B01G006400 chr3B 87.105 791 68 17 612 1389 5405725 5406494 0.000000e+00 865.0
2 TraesCS3B01G006400 chr3B 84.142 309 31 12 612 919 5373413 5373704 1.390000e-72 283.0
3 TraesCS3B01G006400 chr3B 93.717 191 9 1 1598 1785 5406817 5407007 1.390000e-72 283.0
4 TraesCS3B01G006400 chr3B 84.249 273 20 9 38 296 5404816 5405079 6.580000e-61 244.0
5 TraesCS3B01G006400 chr3B 85.714 210 20 5 1782 1987 5407052 5407255 1.860000e-51 213.0
6 TraesCS3B01G006400 chr3B 76.190 210 18 17 87 296 5328393 5328570 5.460000e-12 82.4
7 TraesCS3B01G006400 chr3B 84.524 84 3 7 214 297 3402299 3402226 9.140000e-10 75.0
8 TraesCS3B01G006400 chr3A 86.111 648 40 19 773 1413 7653160 7653764 0.000000e+00 652.0
9 TraesCS3B01G006400 chr3A 84.342 281 16 15 1 276 7650389 7650646 1.410000e-62 250.0
10 TraesCS3B01G006400 chr3A 88.485 165 10 3 1598 1762 7654036 7654191 8.700000e-45 191.0
11 TraesCS3B01G006400 chr3A 85.235 149 6 9 302 436 7650895 7651041 3.200000e-29 139.0
12 TraesCS3B01G006400 chr3D 82.029 818 84 34 612 1413 1318166 1317396 2.580000e-179 638.0
13 TraesCS3B01G006400 chr3D 82.119 302 33 13 7 296 1318742 1318450 3.060000e-59 239.0
14 TraesCS3B01G006400 chr3D 86.585 164 11 7 1622 1785 1317110 1316958 1.130000e-38 171.0
15 TraesCS3B01G006400 chr3D 81.714 175 16 8 1921 2089 1316957 1316793 5.350000e-27 132.0
16 TraesCS3B01G006400 chr3D 89.831 59 6 0 440 498 1324773 1324715 2.540000e-10 76.8
17 TraesCS3B01G006400 chr7A 77.746 692 67 41 931 1603 653264535 653265158 6.310000e-91 344.0
18 TraesCS3B01G006400 chr7A 77.886 511 51 29 1102 1603 310580097 310580554 6.540000e-66 261.0
19 TraesCS3B01G006400 chr6A 77.601 692 69 40 931 1603 87535196 87534572 8.160000e-90 340.0
20 TraesCS3B01G006400 chr1D 90.667 225 18 3 1017 1240 46107117 46107339 1.790000e-76 296.0
21 TraesCS3B01G006400 chr4D 91.429 210 18 0 1015 1224 321815852 321815643 3.000000e-74 289.0
22 TraesCS3B01G006400 chr5A 91.414 198 17 0 1015 1212 705529283 705529480 3.020000e-69 272.0
23 TraesCS3B01G006400 chr4A 81.341 343 38 15 931 1262 682035447 682035774 3.040000e-64 255.0
24 TraesCS3B01G006400 chr4A 79.909 219 20 10 1394 1603 682035855 682036058 3.200000e-29 139.0
25 TraesCS3B01G006400 chr5B 90.957 188 11 2 1598 1785 528388363 528388544 5.090000e-62 248.0
26 TraesCS3B01G006400 chr5B 93.333 45 2 1 1560 1604 528388263 528388306 5.500000e-07 65.8
27 TraesCS3B01G006400 chr7B 85.778 225 29 2 1017 1240 215233773 215233551 3.960000e-58 235.0
28 TraesCS3B01G006400 chr6B 89.362 188 14 2 1598 1785 682368415 682368596 5.120000e-57 231.0
29 TraesCS3B01G006400 chr2D 81.915 94 14 2 1272 1362 41234271 41234364 2.540000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G006400 chr3B 3308907 3311290 2383 True 4403.00 4403 100.00000 1 2384 1 chr3B.!!$R1 2383
1 TraesCS3B01G006400 chr3B 5404816 5407255 2439 False 401.25 865 87.69625 38 1987 4 chr3B.!!$F3 1949
2 TraesCS3B01G006400 chr3A 7650389 7654191 3802 False 308.00 652 86.04325 1 1762 4 chr3A.!!$F1 1761
3 TraesCS3B01G006400 chr3D 1316793 1318742 1949 True 295.00 638 83.11175 7 2089 4 chr3D.!!$R2 2082
4 TraesCS3B01G006400 chr7A 653264535 653265158 623 False 344.00 344 77.74600 931 1603 1 chr7A.!!$F2 672
5 TraesCS3B01G006400 chr6A 87534572 87535196 624 True 340.00 340 77.60100 931 1603 1 chr6A.!!$R1 672

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
515 883 0.248866 CAAACGCGCCAACTTTTCCT 60.249 50.0 5.73 0.0 0.0 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2208 4663 0.032678 CGAGGCCTGACGCTGAATAT 59.967 55.0 12.0 0.0 37.74 1.28 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 2.240921 GGAGAGCAAGGAAGGAAGGAAT 59.759 50.000 0.00 0.00 0.00 3.01
57 67 0.675083 CCAGACCACAAATGCTTGCA 59.325 50.000 0.00 0.00 35.84 4.08
96 106 2.027460 GGTTGTTGTTGCTGCCCG 59.973 61.111 0.00 0.00 0.00 6.13
100 110 1.103987 TTGTTGTTGCTGCCCGCTTA 61.104 50.000 0.00 0.00 40.11 3.09
104 114 2.436646 TTGCTGCCCGCTTAGCTC 60.437 61.111 1.76 0.00 40.52 4.09
130 140 3.105283 TCCTACTCCTAGCCTCCAAAAC 58.895 50.000 0.00 0.00 0.00 2.43
155 165 2.325583 TGAAGCCAAAACAGTCGTCT 57.674 45.000 0.00 0.00 0.00 4.18
165 179 1.512926 ACAGTCGTCTGATTTGGTGC 58.487 50.000 16.64 0.00 43.76 5.01
168 211 1.301322 TCGTCTGATTTGGTGCGCA 60.301 52.632 5.66 5.66 0.00 6.09
169 212 1.133253 CGTCTGATTTGGTGCGCAG 59.867 57.895 12.22 0.00 0.00 5.18
176 219 2.786512 ATTTGGTGCGCAGTCCCCAT 62.787 55.000 12.22 0.93 0.00 4.00
177 220 3.918253 TTGGTGCGCAGTCCCCATC 62.918 63.158 12.22 0.00 0.00 3.51
179 222 4.101448 GTGCGCAGTCCCCATCCT 62.101 66.667 12.22 0.00 0.00 3.24
180 223 4.100084 TGCGCAGTCCCCATCCTG 62.100 66.667 5.66 0.00 0.00 3.86
181 224 4.101448 GCGCAGTCCCCATCCTGT 62.101 66.667 0.30 0.00 0.00 4.00
182 225 2.187946 CGCAGTCCCCATCCTGTC 59.812 66.667 0.00 0.00 0.00 3.51
183 226 2.592308 GCAGTCCCCATCCTGTCC 59.408 66.667 0.00 0.00 0.00 4.02
184 227 1.997874 GCAGTCCCCATCCTGTCCT 60.998 63.158 0.00 0.00 0.00 3.85
185 228 1.977293 GCAGTCCCCATCCTGTCCTC 61.977 65.000 0.00 0.00 0.00 3.71
186 229 0.618680 CAGTCCCCATCCTGTCCTCA 60.619 60.000 0.00 0.00 0.00 3.86
187 230 0.344790 AGTCCCCATCCTGTCCTCAT 59.655 55.000 0.00 0.00 0.00 2.90
188 231 0.761802 GTCCCCATCCTGTCCTCATC 59.238 60.000 0.00 0.00 0.00 2.92
189 232 0.644380 TCCCCATCCTGTCCTCATCT 59.356 55.000 0.00 0.00 0.00 2.90
190 233 1.055040 CCCCATCCTGTCCTCATCTC 58.945 60.000 0.00 0.00 0.00 2.75
191 234 1.414245 CCCCATCCTGTCCTCATCTCT 60.414 57.143 0.00 0.00 0.00 3.10
192 235 1.969923 CCCATCCTGTCCTCATCTCTC 59.030 57.143 0.00 0.00 0.00 3.20
193 236 1.969923 CCATCCTGTCCTCATCTCTCC 59.030 57.143 0.00 0.00 0.00 3.71
194 237 2.675583 CATCCTGTCCTCATCTCTCCA 58.324 52.381 0.00 0.00 0.00 3.86
201 244 1.227205 CTCATCTCTCCACCGCAGC 60.227 63.158 0.00 0.00 0.00 5.25
247 291 2.814097 GCCAGCTCCAAAACTCCTTACA 60.814 50.000 0.00 0.00 0.00 2.41
296 340 0.333993 ATGATTTCAGGCAGGCAGGT 59.666 50.000 0.00 0.00 0.00 4.00
300 344 0.840288 TTTCAGGCAGGCAGGTAGGA 60.840 55.000 0.00 0.00 0.00 2.94
351 680 7.090808 TGTATACTGACATCAACTGACTGAAC 58.909 38.462 4.17 0.00 0.00 3.18
375 715 4.944048 TGGTACTACGACACGCTATAGTA 58.056 43.478 0.84 0.00 0.00 1.82
438 791 1.068055 ACTACTCACGTTTGGTAGCCG 60.068 52.381 15.08 0.00 37.14 5.52
462 815 6.623549 CGGTAATTAACTAACTCACGTCTCCA 60.624 42.308 0.00 0.00 0.00 3.86
471 824 2.356313 ACGTCTCCAGCACGCTTG 60.356 61.111 0.00 0.00 41.10 4.01
472 825 2.049156 CGTCTCCAGCACGCTTGA 60.049 61.111 0.00 0.00 0.00 3.02
473 826 2.091112 CGTCTCCAGCACGCTTGAG 61.091 63.158 12.68 12.68 37.23 3.02
474 827 2.047844 TCTCCAGCACGCTTGAGC 60.048 61.111 13.79 0.00 36.24 4.26
475 828 3.123620 CTCCAGCACGCTTGAGCC 61.124 66.667 7.15 0.00 37.91 4.70
476 829 3.889134 CTCCAGCACGCTTGAGCCA 62.889 63.158 7.15 0.00 37.91 4.75
477 830 3.730761 CCAGCACGCTTGAGCCAC 61.731 66.667 0.00 0.00 37.91 5.01
478 831 2.974148 CAGCACGCTTGAGCCACA 60.974 61.111 0.00 0.00 37.91 4.17
479 832 2.203195 AGCACGCTTGAGCCACAA 60.203 55.556 0.00 0.00 37.91 3.33
489 857 2.708216 TGAGCCACAAGTTCAGTTCA 57.292 45.000 0.00 0.00 31.27 3.18
503 871 0.304705 AGTTCAGTGAAGCAAACGCG 59.695 50.000 5.62 3.53 0.00 6.01
504 872 1.010125 TTCAGTGAAGCAAACGCGC 60.010 52.632 5.73 0.00 0.00 6.86
507 875 2.025441 GTGAAGCAAACGCGCCAA 59.975 55.556 5.73 0.00 0.00 4.52
509 877 2.331451 GAAGCAAACGCGCCAACT 59.669 55.556 5.73 0.00 0.00 3.16
510 878 1.299089 GAAGCAAACGCGCCAACTT 60.299 52.632 5.73 5.23 0.00 2.66
513 881 0.869880 AGCAAACGCGCCAACTTTTC 60.870 50.000 5.73 0.00 0.00 2.29
514 882 1.817217 GCAAACGCGCCAACTTTTCC 61.817 55.000 5.73 0.00 0.00 3.13
515 883 0.248866 CAAACGCGCCAACTTTTCCT 60.249 50.000 5.73 0.00 0.00 3.36
518 886 0.818040 ACGCGCCAACTTTTCCTTCT 60.818 50.000 5.73 0.00 0.00 2.85
520 888 1.239347 GCGCCAACTTTTCCTTCTCT 58.761 50.000 0.00 0.00 0.00 3.10
521 889 1.609072 GCGCCAACTTTTCCTTCTCTT 59.391 47.619 0.00 0.00 0.00 2.85
523 891 3.853676 GCGCCAACTTTTCCTTCTCTTTC 60.854 47.826 0.00 0.00 0.00 2.62
524 892 3.315191 CGCCAACTTTTCCTTCTCTTTCA 59.685 43.478 0.00 0.00 0.00 2.69
525 893 4.202010 CGCCAACTTTTCCTTCTCTTTCAA 60.202 41.667 0.00 0.00 0.00 2.69
528 896 6.036470 CCAACTTTTCCTTCTCTTTCAACAC 58.964 40.000 0.00 0.00 0.00 3.32
529 897 6.127619 CCAACTTTTCCTTCTCTTTCAACACT 60.128 38.462 0.00 0.00 0.00 3.55
530 898 7.067008 CCAACTTTTCCTTCTCTTTCAACACTA 59.933 37.037 0.00 0.00 0.00 2.74
531 899 8.624776 CAACTTTTCCTTCTCTTTCAACACTAT 58.375 33.333 0.00 0.00 0.00 2.12
533 901 7.993183 ACTTTTCCTTCTCTTTCAACACTATGA 59.007 33.333 0.00 0.00 0.00 2.15
534 902 8.746052 TTTTCCTTCTCTTTCAACACTATGAA 57.254 30.769 0.00 0.00 37.53 2.57
536 904 8.924511 TTCCTTCTCTTTCAACACTATGAATT 57.075 30.769 0.00 0.00 38.98 2.17
537 905 8.553459 TCCTTCTCTTTCAACACTATGAATTC 57.447 34.615 0.00 0.00 38.98 2.17
538 906 8.378565 TCCTTCTCTTTCAACACTATGAATTCT 58.621 33.333 7.05 0.00 38.98 2.40
542 933 8.993121 TCTCTTTCAACACTATGAATTCTTGAC 58.007 33.333 7.05 0.00 38.98 3.18
553 979 3.748048 TGAATTCTTGACCTCGCTGAAAG 59.252 43.478 7.05 0.00 0.00 2.62
566 992 2.675032 CGCTGAAAGAGATGCTGTGGTA 60.675 50.000 0.00 0.00 34.81 3.25
567 993 3.338249 GCTGAAAGAGATGCTGTGGTAA 58.662 45.455 0.00 0.00 34.07 2.85
568 994 3.126000 GCTGAAAGAGATGCTGTGGTAAC 59.874 47.826 0.00 0.00 34.07 2.50
569 995 4.573900 CTGAAAGAGATGCTGTGGTAACT 58.426 43.478 0.00 0.00 34.07 2.24
570 996 4.973168 TGAAAGAGATGCTGTGGTAACTT 58.027 39.130 0.00 0.00 37.61 2.66
571 997 4.756642 TGAAAGAGATGCTGTGGTAACTTG 59.243 41.667 0.00 0.00 37.61 3.16
572 998 2.704572 AGAGATGCTGTGGTAACTTGC 58.295 47.619 0.00 0.00 37.61 4.01
580 1010 1.213182 TGTGGTAACTTGCACCTTCCA 59.787 47.619 0.00 0.00 36.96 3.53
583 1013 3.057526 GTGGTAACTTGCACCTTCCATTC 60.058 47.826 0.00 0.00 36.96 2.67
604 1038 1.586422 CATGGATGGATGTCACCGTC 58.414 55.000 0.00 0.00 43.11 4.79
703 1205 2.030562 AACGCCTCAACCTCACCG 59.969 61.111 0.00 0.00 0.00 4.94
704 1206 4.681978 ACGCCTCAACCTCACCGC 62.682 66.667 0.00 0.00 0.00 5.68
709 1211 2.031012 TCAACCTCACCGCAGCTG 59.969 61.111 10.11 10.11 0.00 4.24
714 1216 0.613260 ACCTCACCGCAGCTGAATTA 59.387 50.000 20.43 0.00 0.00 1.40
720 2921 1.732259 ACCGCAGCTGAATTAGAAACG 59.268 47.619 20.43 7.79 0.00 3.60
722 2923 1.128507 CGCAGCTGAATTAGAAACGCA 59.871 47.619 20.43 0.00 0.00 5.24
723 2924 2.778659 GCAGCTGAATTAGAAACGCAG 58.221 47.619 20.43 0.00 0.00 5.18
728 2929 4.569966 AGCTGAATTAGAAACGCAGATGAG 59.430 41.667 0.00 0.00 0.00 2.90
735 2936 1.269448 GAAACGCAGATGAGCCCAAAA 59.731 47.619 0.00 0.00 0.00 2.44
736 2937 1.549203 AACGCAGATGAGCCCAAAAT 58.451 45.000 0.00 0.00 0.00 1.82
738 2939 1.097232 CGCAGATGAGCCCAAAATCA 58.903 50.000 0.00 0.00 0.00 2.57
739 2940 1.065102 CGCAGATGAGCCCAAAATCAG 59.935 52.381 0.00 0.00 0.00 2.90
741 2942 1.407979 CAGATGAGCCCAAAATCAGCC 59.592 52.381 0.00 0.00 32.29 4.85
742 2943 0.383231 GATGAGCCCAAAATCAGCCG 59.617 55.000 0.00 0.00 0.00 5.52
743 2944 1.039233 ATGAGCCCAAAATCAGCCGG 61.039 55.000 0.00 0.00 0.00 6.13
744 2945 1.678970 GAGCCCAAAATCAGCCGGT 60.679 57.895 1.90 0.00 0.00 5.28
745 2946 1.937546 GAGCCCAAAATCAGCCGGTG 61.938 60.000 1.90 0.00 0.00 4.94
746 2947 1.976474 GCCCAAAATCAGCCGGTGA 60.976 57.895 1.90 6.23 40.38 4.02
747 2948 1.883021 CCCAAAATCAGCCGGTGAC 59.117 57.895 1.90 0.00 38.28 3.67
766 2970 1.003112 GGCCATGTCACCACCGTAA 60.003 57.895 0.00 0.00 0.00 3.18
767 2971 0.393808 GGCCATGTCACCACCGTAAT 60.394 55.000 0.00 0.00 0.00 1.89
768 2972 1.014352 GCCATGTCACCACCGTAATC 58.986 55.000 0.00 0.00 0.00 1.75
769 2973 1.663695 CCATGTCACCACCGTAATCC 58.336 55.000 0.00 0.00 0.00 3.01
770 2974 1.286501 CATGTCACCACCGTAATCCG 58.713 55.000 0.00 0.00 0.00 4.18
805 3009 1.408266 GGTTTCACCGTAGCCATGGAT 60.408 52.381 18.40 13.25 34.59 3.41
846 3053 1.476291 CCCCCGCTACTTAACCAATCC 60.476 57.143 0.00 0.00 0.00 3.01
891 3098 3.699894 CTCCAGCCGCAGTCCACT 61.700 66.667 0.00 0.00 0.00 4.00
970 3189 2.029380 CCCACCGAAAAACAAGATTCCC 60.029 50.000 0.00 0.00 0.00 3.97
1362 3601 2.253452 GCCGTGTGCTCTGCTTTG 59.747 61.111 0.00 0.00 36.87 2.77
1392 3631 1.079266 GCAGCAGTGACCCTCTCTG 60.079 63.158 0.00 0.00 40.04 3.35
1393 3632 1.595882 CAGCAGTGACCCTCTCTGG 59.404 63.158 0.00 0.00 38.16 3.86
1412 3662 1.152440 CTCGCCCCCTCCTGTAGAT 60.152 63.158 0.00 0.00 0.00 1.98
1465 3745 8.268850 GGTCAGAAGATGCTGAACTTATAAAA 57.731 34.615 0.00 0.00 46.58 1.52
1466 3746 8.730680 GGTCAGAAGATGCTGAACTTATAAAAA 58.269 33.333 0.00 0.00 46.58 1.94
1529 3820 5.335127 CCATGGACGAACAATCTGAAATTC 58.665 41.667 5.56 0.00 0.00 2.17
1536 3827 4.083537 CGAACAATCTGAAATTCGGGTTCA 60.084 41.667 16.75 0.00 40.11 3.18
1574 3865 5.470098 TCCTGTTCTTGTGAGAATTAGCAAC 59.530 40.000 0.00 0.00 43.41 4.17
1596 3921 8.537729 CAACTTTTTCATTGCAACTGAAATTC 57.462 30.769 24.59 0.00 41.03 2.17
1600 3992 4.524316 TCATTGCAACTGAAATTCTGGG 57.476 40.909 0.00 0.00 0.00 4.45
1607 3999 4.809673 CAACTGAAATTCTGGGGCTTTAC 58.190 43.478 4.93 0.00 0.00 2.01
1715 4113 7.228906 TGGACACTAGTACTATCATCTTGTAGC 59.771 40.741 2.33 0.00 0.00 3.58
1729 4127 3.321968 TCTTGTAGCACTGTCAGACATGT 59.678 43.478 6.91 0.00 0.00 3.21
1846 4292 6.886459 TCAATACTGAACCTACGGTTACTAGT 59.114 38.462 0.00 0.00 46.95 2.57
1848 4294 7.793927 ATACTGAACCTACGGTTACTAGTAC 57.206 40.000 0.91 0.00 46.95 2.73
1849 4295 5.810095 ACTGAACCTACGGTTACTAGTACT 58.190 41.667 0.91 0.00 46.95 2.73
1851 4297 7.394816 ACTGAACCTACGGTTACTAGTACTAA 58.605 38.462 0.91 0.00 46.95 2.24
1852 4298 7.334671 ACTGAACCTACGGTTACTAGTACTAAC 59.665 40.741 0.91 0.00 46.95 2.34
1853 4299 7.394816 TGAACCTACGGTTACTAGTACTAACT 58.605 38.462 0.91 0.00 46.95 2.24
1854 4300 7.334421 TGAACCTACGGTTACTAGTACTAACTG 59.666 40.741 12.39 12.39 46.95 3.16
1874 4320 1.741732 GCCTGTGAATCAGATCGCACT 60.742 52.381 14.25 0.00 46.27 4.40
1877 4323 3.181482 CCTGTGAATCAGATCGCACTACT 60.181 47.826 14.25 0.00 46.27 2.57
1879 4325 2.537625 GTGAATCAGATCGCACTACTGC 59.462 50.000 8.44 0.00 40.38 4.40
1885 4331 0.926846 GATCGCACTACTGCTTCAGC 59.073 55.000 0.00 0.00 41.77 4.26
1889 4335 1.800805 GCACTACTGCTTCAGCTTCA 58.199 50.000 0.00 0.00 40.63 3.02
1908 4358 7.485277 CAGCTTCAGAAGAAACATGAATGAATC 59.515 37.037 14.86 0.00 32.82 2.52
1918 4368 6.459670 AACATGAATGAATCAATGCAGCTA 57.540 33.333 0.00 0.00 42.54 3.32
1935 4385 4.213059 GCAGCTAGAAATGAATAGGAGCAC 59.787 45.833 0.00 0.00 0.00 4.40
1937 4387 6.739843 GCAGCTAGAAATGAATAGGAGCACTA 60.740 42.308 0.00 0.00 35.80 2.74
1939 4389 5.631512 GCTAGAAATGAATAGGAGCACTACG 59.368 44.000 0.00 0.00 33.70 3.51
1943 4393 7.275920 AGAAATGAATAGGAGCACTACGAAAT 58.724 34.615 0.00 0.00 33.70 2.17
1945 4395 8.594881 AAATGAATAGGAGCACTACGAAATAG 57.405 34.615 0.00 0.00 33.70 1.73
1946 4396 6.710597 TGAATAGGAGCACTACGAAATAGT 57.289 37.500 0.00 0.00 45.61 2.12
1948 4398 7.646314 TGAATAGGAGCACTACGAAATAGTAC 58.354 38.462 0.00 0.00 42.62 2.73
1949 4399 4.915158 AGGAGCACTACGAAATAGTACC 57.085 45.455 0.00 0.00 42.62 3.34
1987 4437 2.232208 GGTGCCCCATCAAGAAAGAAAG 59.768 50.000 0.00 0.00 0.00 2.62
1988 4438 3.157087 GTGCCCCATCAAGAAAGAAAGA 58.843 45.455 0.00 0.00 0.00 2.52
1989 4439 3.573967 GTGCCCCATCAAGAAAGAAAGAA 59.426 43.478 0.00 0.00 0.00 2.52
1990 4440 4.039124 GTGCCCCATCAAGAAAGAAAGAAA 59.961 41.667 0.00 0.00 0.00 2.52
2010 4460 0.318360 GAAACCTTTCCGTTTGGCCG 60.318 55.000 0.00 0.00 36.10 6.13
2018 4468 4.160635 CGTTTGGCCGGCGTCATC 62.161 66.667 22.54 6.51 0.00 2.92
2019 4469 3.053291 GTTTGGCCGGCGTCATCA 61.053 61.111 22.54 9.62 0.00 3.07
2020 4470 3.053291 TTTGGCCGGCGTCATCAC 61.053 61.111 22.54 4.79 0.00 3.06
2027 4477 3.554692 GGCGTCATCACCGAAGCG 61.555 66.667 0.00 0.00 40.75 4.68
2028 4478 2.809601 GCGTCATCACCGAAGCGT 60.810 61.111 0.00 0.00 30.88 5.07
2029 4479 2.789203 GCGTCATCACCGAAGCGTC 61.789 63.158 0.00 0.00 30.88 5.19
2030 4480 1.443702 CGTCATCACCGAAGCGTCA 60.444 57.895 0.00 0.00 0.00 4.35
2031 4481 1.006825 CGTCATCACCGAAGCGTCAA 61.007 55.000 0.00 0.00 0.00 3.18
2032 4482 0.716108 GTCATCACCGAAGCGTCAAG 59.284 55.000 0.00 0.00 0.00 3.02
2033 4483 0.389817 TCATCACCGAAGCGTCAAGG 60.390 55.000 0.00 0.00 0.00 3.61
2034 4484 1.741770 ATCACCGAAGCGTCAAGGC 60.742 57.895 0.00 0.00 0.00 4.35
2035 4485 3.423154 CACCGAAGCGTCAAGGCC 61.423 66.667 0.00 0.00 0.00 5.19
2036 4486 3.626924 ACCGAAGCGTCAAGGCCT 61.627 61.111 0.00 0.00 0.00 5.19
2037 4487 2.815647 CCGAAGCGTCAAGGCCTC 60.816 66.667 5.23 0.00 0.00 4.70
2038 4488 2.048222 CGAAGCGTCAAGGCCTCA 60.048 61.111 5.23 0.00 0.00 3.86
2039 4489 1.667830 CGAAGCGTCAAGGCCTCAA 60.668 57.895 5.23 0.00 0.00 3.02
2040 4490 1.869690 GAAGCGTCAAGGCCTCAAC 59.130 57.895 5.23 6.56 0.00 3.18
2041 4491 1.578206 GAAGCGTCAAGGCCTCAACC 61.578 60.000 5.23 1.95 0.00 3.77
2042 4492 2.281484 GCGTCAAGGCCTCAACCA 60.281 61.111 5.23 0.00 0.00 3.67
2043 4493 1.896660 GCGTCAAGGCCTCAACCAA 60.897 57.895 5.23 0.00 0.00 3.67
2044 4494 1.452145 GCGTCAAGGCCTCAACCAAA 61.452 55.000 5.23 0.00 0.00 3.28
2045 4495 1.247567 CGTCAAGGCCTCAACCAAAT 58.752 50.000 5.23 0.00 0.00 2.32
2046 4496 1.200020 CGTCAAGGCCTCAACCAAATC 59.800 52.381 5.23 0.00 0.00 2.17
2047 4497 2.519013 GTCAAGGCCTCAACCAAATCT 58.481 47.619 5.23 0.00 0.00 2.40
2048 4498 2.489722 GTCAAGGCCTCAACCAAATCTC 59.510 50.000 5.23 0.00 0.00 2.75
2049 4499 2.376518 TCAAGGCCTCAACCAAATCTCT 59.623 45.455 5.23 0.00 0.00 3.10
2050 4500 2.751806 CAAGGCCTCAACCAAATCTCTC 59.248 50.000 5.23 0.00 0.00 3.20
2051 4501 1.065854 AGGCCTCAACCAAATCTCTCG 60.066 52.381 0.00 0.00 0.00 4.04
2052 4502 0.729690 GCCTCAACCAAATCTCTCGC 59.270 55.000 0.00 0.00 0.00 5.03
2053 4503 1.373570 CCTCAACCAAATCTCTCGCC 58.626 55.000 0.00 0.00 0.00 5.54
2054 4504 1.339055 CCTCAACCAAATCTCTCGCCA 60.339 52.381 0.00 0.00 0.00 5.69
2055 4505 2.636830 CTCAACCAAATCTCTCGCCAT 58.363 47.619 0.00 0.00 0.00 4.40
2056 4506 2.611292 CTCAACCAAATCTCTCGCCATC 59.389 50.000 0.00 0.00 0.00 3.51
2057 4507 2.027285 TCAACCAAATCTCTCGCCATCA 60.027 45.455 0.00 0.00 0.00 3.07
2058 4508 2.029838 ACCAAATCTCTCGCCATCAC 57.970 50.000 0.00 0.00 0.00 3.06
2059 4509 1.303309 CCAAATCTCTCGCCATCACC 58.697 55.000 0.00 0.00 0.00 4.02
2060 4510 1.407299 CCAAATCTCTCGCCATCACCA 60.407 52.381 0.00 0.00 0.00 4.17
2061 4511 2.358957 CAAATCTCTCGCCATCACCAA 58.641 47.619 0.00 0.00 0.00 3.67
2062 4512 2.322355 AATCTCTCGCCATCACCAAG 57.678 50.000 0.00 0.00 0.00 3.61
2063 4513 0.467384 ATCTCTCGCCATCACCAAGG 59.533 55.000 0.00 0.00 0.00 3.61
2064 4514 0.614697 TCTCTCGCCATCACCAAGGA 60.615 55.000 0.00 0.00 0.00 3.36
2065 4515 0.250234 CTCTCGCCATCACCAAGGAA 59.750 55.000 0.00 0.00 0.00 3.36
2066 4516 0.911769 TCTCGCCATCACCAAGGAAT 59.088 50.000 0.00 0.00 0.00 3.01
2067 4517 1.281867 TCTCGCCATCACCAAGGAATT 59.718 47.619 0.00 0.00 0.00 2.17
2068 4518 2.503765 TCTCGCCATCACCAAGGAATTA 59.496 45.455 0.00 0.00 0.00 1.40
2069 4519 2.614057 CTCGCCATCACCAAGGAATTAC 59.386 50.000 0.00 0.00 0.00 1.89
2070 4520 1.676006 CGCCATCACCAAGGAATTACC 59.324 52.381 0.00 0.00 39.35 2.85
2071 4521 2.031870 GCCATCACCAAGGAATTACCC 58.968 52.381 0.00 0.00 40.05 3.69
2072 4522 2.297701 CCATCACCAAGGAATTACCCG 58.702 52.381 0.00 0.00 40.05 5.28
2073 4523 2.297701 CATCACCAAGGAATTACCCGG 58.702 52.381 0.00 0.00 40.05 5.73
2074 4524 0.034863 TCACCAAGGAATTACCCGGC 60.035 55.000 0.00 0.00 40.05 6.13
2075 4525 0.322997 CACCAAGGAATTACCCGGCA 60.323 55.000 0.00 0.00 40.05 5.69
2076 4526 0.034477 ACCAAGGAATTACCCGGCAG 60.034 55.000 0.00 0.00 40.05 4.85
2077 4527 0.254747 CCAAGGAATTACCCGGCAGA 59.745 55.000 0.00 0.00 40.05 4.26
2078 4528 1.340600 CCAAGGAATTACCCGGCAGAA 60.341 52.381 0.00 0.00 40.05 3.02
2079 4529 2.017049 CAAGGAATTACCCGGCAGAAG 58.983 52.381 0.00 0.00 40.05 2.85
2080 4530 1.580059 AGGAATTACCCGGCAGAAGA 58.420 50.000 0.00 0.00 40.05 2.87
2081 4531 2.127708 AGGAATTACCCGGCAGAAGAT 58.872 47.619 0.00 0.00 40.05 2.40
2082 4532 2.158755 AGGAATTACCCGGCAGAAGATG 60.159 50.000 0.00 0.00 40.05 2.90
2083 4533 2.158813 GGAATTACCCGGCAGAAGATGA 60.159 50.000 0.00 0.00 0.00 2.92
2084 4534 3.541632 GAATTACCCGGCAGAAGATGAA 58.458 45.455 0.00 0.00 0.00 2.57
2085 4535 2.691409 TTACCCGGCAGAAGATGAAG 57.309 50.000 0.00 0.00 0.00 3.02
2086 4536 1.860641 TACCCGGCAGAAGATGAAGA 58.139 50.000 0.00 0.00 0.00 2.87
2087 4537 1.207791 ACCCGGCAGAAGATGAAGAT 58.792 50.000 0.00 0.00 0.00 2.40
2088 4538 1.134280 ACCCGGCAGAAGATGAAGATG 60.134 52.381 0.00 0.00 0.00 2.90
2089 4539 1.590932 CCGGCAGAAGATGAAGATGG 58.409 55.000 0.00 0.00 0.00 3.51
2090 4540 1.134280 CCGGCAGAAGATGAAGATGGT 60.134 52.381 0.00 0.00 0.00 3.55
2091 4541 2.103094 CCGGCAGAAGATGAAGATGGTA 59.897 50.000 0.00 0.00 0.00 3.25
2092 4542 3.432186 CCGGCAGAAGATGAAGATGGTAA 60.432 47.826 0.00 0.00 0.00 2.85
2093 4543 3.806521 CGGCAGAAGATGAAGATGGTAAG 59.193 47.826 0.00 0.00 0.00 2.34
2094 4544 3.563390 GGCAGAAGATGAAGATGGTAAGC 59.437 47.826 0.00 0.00 0.00 3.09
2095 4545 3.247173 GCAGAAGATGAAGATGGTAAGCG 59.753 47.826 0.00 0.00 0.00 4.68
2096 4546 3.806521 CAGAAGATGAAGATGGTAAGCGG 59.193 47.826 0.00 0.00 0.00 5.52
2097 4547 3.706594 AGAAGATGAAGATGGTAAGCGGA 59.293 43.478 0.00 0.00 0.00 5.54
2098 4548 3.460857 AGATGAAGATGGTAAGCGGAC 57.539 47.619 0.00 0.00 0.00 4.79
2099 4549 2.128035 GATGAAGATGGTAAGCGGACG 58.872 52.381 0.00 0.00 0.00 4.79
2100 4550 0.174845 TGAAGATGGTAAGCGGACGG 59.825 55.000 0.00 0.00 0.00 4.79
2101 4551 0.529992 GAAGATGGTAAGCGGACGGG 60.530 60.000 0.00 0.00 0.00 5.28
2102 4552 1.262640 AAGATGGTAAGCGGACGGGT 61.263 55.000 0.00 0.00 0.00 5.28
2103 4553 1.227176 GATGGTAAGCGGACGGGTC 60.227 63.158 0.00 0.00 0.00 4.46
2104 4554 1.673808 GATGGTAAGCGGACGGGTCT 61.674 60.000 0.00 0.00 0.00 3.85
2105 4555 0.396139 ATGGTAAGCGGACGGGTCTA 60.396 55.000 0.00 0.00 0.00 2.59
2106 4556 1.315257 TGGTAAGCGGACGGGTCTAC 61.315 60.000 0.00 0.00 0.00 2.59
2107 4557 1.435105 GTAAGCGGACGGGTCTACC 59.565 63.158 0.00 0.00 0.00 3.18
2128 4578 1.418373 CGTCATCACTGAAGCGTCAA 58.582 50.000 3.39 0.00 31.88 3.18
2139 4589 3.423154 GCGTCAAGGCCTCAACCG 61.423 66.667 5.23 7.77 33.69 4.44
2157 4612 1.536922 CCGATTCTCTCACCATCACCG 60.537 57.143 0.00 0.00 0.00 4.94
2158 4613 1.405463 CGATTCTCTCACCATCACCGA 59.595 52.381 0.00 0.00 0.00 4.69
2162 4617 0.743688 CTCTCACCATCACCGAGGAG 59.256 60.000 0.00 0.00 0.00 3.69
2183 4638 1.470098 CAAACCGGCAGAAGATGAAGG 59.530 52.381 0.00 0.00 34.35 3.46
2186 4641 0.250234 CCGGCAGAAGATGAAGGTGA 59.750 55.000 0.00 0.00 0.00 4.02
2187 4642 1.134280 CCGGCAGAAGATGAAGGTGAT 60.134 52.381 0.00 0.00 0.00 3.06
2188 4643 2.636830 CGGCAGAAGATGAAGGTGATT 58.363 47.619 0.00 0.00 0.00 2.57
2189 4644 3.432186 CCGGCAGAAGATGAAGGTGATTA 60.432 47.826 0.00 0.00 0.00 1.75
2190 4645 3.806521 CGGCAGAAGATGAAGGTGATTAG 59.193 47.826 0.00 0.00 0.00 1.73
2191 4646 4.681781 CGGCAGAAGATGAAGGTGATTAGT 60.682 45.833 0.00 0.00 0.00 2.24
2192 4647 5.451937 CGGCAGAAGATGAAGGTGATTAGTA 60.452 44.000 0.00 0.00 0.00 1.82
2193 4648 5.755861 GGCAGAAGATGAAGGTGATTAGTAC 59.244 44.000 0.00 0.00 0.00 2.73
2194 4649 5.755861 GCAGAAGATGAAGGTGATTAGTACC 59.244 44.000 0.00 0.00 38.52 3.34
2195 4650 5.980116 CAGAAGATGAAGGTGATTAGTACCG 59.020 44.000 0.00 0.00 43.06 4.02
2196 4651 5.892119 AGAAGATGAAGGTGATTAGTACCGA 59.108 40.000 0.00 0.00 43.06 4.69
2197 4652 5.776173 AGATGAAGGTGATTAGTACCGAG 57.224 43.478 0.00 0.00 43.06 4.63
2198 4653 4.585162 AGATGAAGGTGATTAGTACCGAGG 59.415 45.833 0.00 0.00 43.06 4.63
2199 4654 3.972133 TGAAGGTGATTAGTACCGAGGA 58.028 45.455 0.00 0.00 43.06 3.71
2200 4655 4.346730 TGAAGGTGATTAGTACCGAGGAA 58.653 43.478 0.00 0.00 43.06 3.36
2201 4656 4.960469 TGAAGGTGATTAGTACCGAGGAAT 59.040 41.667 0.00 0.00 43.06 3.01
2202 4657 6.131264 TGAAGGTGATTAGTACCGAGGAATA 58.869 40.000 0.00 0.00 43.06 1.75
2203 4658 6.608405 TGAAGGTGATTAGTACCGAGGAATAA 59.392 38.462 0.00 0.00 43.06 1.40
2204 4659 7.124599 TGAAGGTGATTAGTACCGAGGAATAAA 59.875 37.037 0.00 0.00 43.06 1.40
2205 4660 7.613551 AGGTGATTAGTACCGAGGAATAAAT 57.386 36.000 0.00 0.00 43.06 1.40
2206 4661 8.716674 AGGTGATTAGTACCGAGGAATAAATA 57.283 34.615 0.00 0.00 43.06 1.40
2207 4662 9.151177 AGGTGATTAGTACCGAGGAATAAATAA 57.849 33.333 0.00 0.00 43.06 1.40
2208 4663 9.768662 GGTGATTAGTACCGAGGAATAAATAAA 57.231 33.333 0.00 0.00 0.00 1.40
2217 4672 8.029642 ACCGAGGAATAAATAAATATTCAGCG 57.970 34.615 8.74 9.94 41.84 5.18
2218 4673 7.660208 ACCGAGGAATAAATAAATATTCAGCGT 59.340 33.333 8.74 0.00 41.84 5.07
2219 4674 8.169268 CCGAGGAATAAATAAATATTCAGCGTC 58.831 37.037 8.74 0.00 41.84 5.19
2220 4675 8.708742 CGAGGAATAAATAAATATTCAGCGTCA 58.291 33.333 8.74 0.00 41.84 4.35
2222 4677 9.003658 AGGAATAAATAAATATTCAGCGTCAGG 57.996 33.333 8.74 0.00 41.84 3.86
2223 4678 7.750903 GGAATAAATAAATATTCAGCGTCAGGC 59.249 37.037 8.74 0.00 41.84 4.85
2224 4679 5.438761 AAATAAATATTCAGCGTCAGGCC 57.561 39.130 0.00 0.00 45.17 5.19
2225 4680 2.717639 AAATATTCAGCGTCAGGCCT 57.282 45.000 0.00 0.00 45.17 5.19
2226 4681 2.246719 AATATTCAGCGTCAGGCCTC 57.753 50.000 0.00 0.00 45.17 4.70
2227 4682 0.032678 ATATTCAGCGTCAGGCCTCG 59.967 55.000 0.00 5.72 45.17 4.63
2228 4683 1.035385 TATTCAGCGTCAGGCCTCGA 61.035 55.000 17.43 9.23 45.17 4.04
2229 4684 2.564553 ATTCAGCGTCAGGCCTCGAC 62.565 60.000 17.43 18.67 45.17 4.20
2230 4685 4.803426 CAGCGTCAGGCCTCGACC 62.803 72.222 17.43 14.04 45.17 4.79
2232 4687 4.373116 GCGTCAGGCCTCGACCAA 62.373 66.667 17.43 0.00 34.80 3.67
2233 4688 2.579201 CGTCAGGCCTCGACCAAT 59.421 61.111 22.03 0.00 0.00 3.16
2234 4689 1.079127 CGTCAGGCCTCGACCAATT 60.079 57.895 22.03 0.00 0.00 2.32
2235 4690 1.361668 CGTCAGGCCTCGACCAATTG 61.362 60.000 22.03 0.00 0.00 2.32
2236 4691 1.377202 TCAGGCCTCGACCAATTGC 60.377 57.895 0.00 0.00 0.00 3.56
2237 4692 1.377725 CAGGCCTCGACCAATTGCT 60.378 57.895 0.00 0.00 0.00 3.91
2238 4693 1.377725 AGGCCTCGACCAATTGCTG 60.378 57.895 0.00 0.00 0.00 4.41
2239 4694 2.486966 GCCTCGACCAATTGCTGC 59.513 61.111 0.00 0.00 0.00 5.25
2240 4695 2.334946 GCCTCGACCAATTGCTGCA 61.335 57.895 0.00 0.00 0.00 4.41
2241 4696 1.503542 CCTCGACCAATTGCTGCAC 59.496 57.895 0.00 0.00 0.00 4.57
2242 4697 1.236616 CCTCGACCAATTGCTGCACA 61.237 55.000 0.00 0.00 0.00 4.57
2243 4698 0.592637 CTCGACCAATTGCTGCACAA 59.407 50.000 0.00 4.56 44.01 3.33
2254 4709 3.354948 TGCTGCACAATAATCCTCTGT 57.645 42.857 0.00 0.00 0.00 3.41
2255 4710 4.486125 TGCTGCACAATAATCCTCTGTA 57.514 40.909 0.00 0.00 0.00 2.74
2256 4711 4.842574 TGCTGCACAATAATCCTCTGTAA 58.157 39.130 0.00 0.00 0.00 2.41
2257 4712 5.252547 TGCTGCACAATAATCCTCTGTAAA 58.747 37.500 0.00 0.00 0.00 2.01
2258 4713 5.709631 TGCTGCACAATAATCCTCTGTAAAA 59.290 36.000 0.00 0.00 0.00 1.52
2259 4714 6.127925 TGCTGCACAATAATCCTCTGTAAAAG 60.128 38.462 0.00 0.00 0.00 2.27
2260 4715 6.678900 GCTGCACAATAATCCTCTGTAAAAGG 60.679 42.308 0.00 0.00 35.05 3.11
2261 4716 5.652014 TGCACAATAATCCTCTGTAAAAGGG 59.348 40.000 0.00 0.00 34.46 3.95
2262 4717 5.885912 GCACAATAATCCTCTGTAAAAGGGA 59.114 40.000 0.00 0.00 34.46 4.20
2263 4718 6.038714 GCACAATAATCCTCTGTAAAAGGGAG 59.961 42.308 0.00 0.00 34.46 4.30
2264 4719 6.038714 CACAATAATCCTCTGTAAAAGGGAGC 59.961 42.308 0.00 0.00 34.46 4.70
2265 4720 5.975988 ATAATCCTCTGTAAAAGGGAGCA 57.024 39.130 0.00 0.00 34.46 4.26
2266 4721 3.922171 ATCCTCTGTAAAAGGGAGCAG 57.078 47.619 0.00 0.00 34.46 4.24
2267 4722 2.902608 TCCTCTGTAAAAGGGAGCAGA 58.097 47.619 0.00 0.00 36.65 4.26
2268 4723 3.248024 TCCTCTGTAAAAGGGAGCAGAA 58.752 45.455 0.00 0.00 37.50 3.02
2269 4724 3.261897 TCCTCTGTAAAAGGGAGCAGAAG 59.738 47.826 0.00 0.00 37.50 2.85
2270 4725 3.006247 CTCTGTAAAAGGGAGCAGAAGC 58.994 50.000 0.00 0.00 37.50 3.86
2271 4726 2.371841 TCTGTAAAAGGGAGCAGAAGCA 59.628 45.455 0.00 0.00 45.49 3.91
2272 4727 3.149196 CTGTAAAAGGGAGCAGAAGCAA 58.851 45.455 0.00 0.00 45.49 3.91
2273 4728 3.760684 CTGTAAAAGGGAGCAGAAGCAAT 59.239 43.478 0.00 0.00 45.49 3.56
2274 4729 3.507233 TGTAAAAGGGAGCAGAAGCAATG 59.493 43.478 0.00 0.00 45.49 2.82
2275 4730 2.299326 AAAGGGAGCAGAAGCAATGT 57.701 45.000 0.00 0.00 45.49 2.71
2276 4731 3.439857 AAAGGGAGCAGAAGCAATGTA 57.560 42.857 0.00 0.00 45.49 2.29
2277 4732 2.409948 AGGGAGCAGAAGCAATGTAC 57.590 50.000 0.00 0.00 45.49 2.90
2278 4733 1.912043 AGGGAGCAGAAGCAATGTACT 59.088 47.619 0.00 0.00 45.49 2.73
2279 4734 2.307098 AGGGAGCAGAAGCAATGTACTT 59.693 45.455 0.00 0.00 45.49 2.24
2280 4735 2.680339 GGGAGCAGAAGCAATGTACTTC 59.320 50.000 0.00 0.00 45.49 3.01
2290 4745 7.807687 GAAGCAATGTACTTCTACTCGTTAA 57.192 36.000 0.00 0.00 40.33 2.01
2291 4746 7.813852 AAGCAATGTACTTCTACTCGTTAAG 57.186 36.000 0.00 0.00 0.00 1.85
2292 4747 7.154435 AGCAATGTACTTCTACTCGTTAAGA 57.846 36.000 0.00 0.00 0.00 2.10
2293 4748 7.600065 AGCAATGTACTTCTACTCGTTAAGAA 58.400 34.615 0.00 0.00 0.00 2.52
2294 4749 8.086522 AGCAATGTACTTCTACTCGTTAAGAAA 58.913 33.333 0.00 0.00 31.61 2.52
2295 4750 8.160976 GCAATGTACTTCTACTCGTTAAGAAAC 58.839 37.037 0.00 0.00 31.61 2.78
2296 4751 9.408069 CAATGTACTTCTACTCGTTAAGAAACT 57.592 33.333 0.00 0.00 31.61 2.66
2297 4752 8.967552 ATGTACTTCTACTCGTTAAGAAACTG 57.032 34.615 0.00 0.00 31.61 3.16
2298 4753 6.860023 TGTACTTCTACTCGTTAAGAAACTGC 59.140 38.462 0.00 0.00 31.61 4.40
2299 4754 5.228665 ACTTCTACTCGTTAAGAAACTGCC 58.771 41.667 0.00 0.00 31.61 4.85
2300 4755 4.859304 TCTACTCGTTAAGAAACTGCCA 57.141 40.909 0.00 0.00 33.15 4.92
2301 4756 5.401531 TCTACTCGTTAAGAAACTGCCAT 57.598 39.130 0.00 0.00 33.15 4.40
2302 4757 5.790593 TCTACTCGTTAAGAAACTGCCATT 58.209 37.500 0.00 0.00 33.15 3.16
2303 4758 6.228258 TCTACTCGTTAAGAAACTGCCATTT 58.772 36.000 0.00 0.00 33.15 2.32
2304 4759 5.108385 ACTCGTTAAGAAACTGCCATTTG 57.892 39.130 0.00 0.00 33.15 2.32
2305 4760 4.023193 ACTCGTTAAGAAACTGCCATTTGG 60.023 41.667 0.00 0.00 33.15 3.28
2306 4761 3.886505 TCGTTAAGAAACTGCCATTTGGT 59.113 39.130 0.00 0.00 33.72 3.67
2307 4762 5.064558 TCGTTAAGAAACTGCCATTTGGTA 58.935 37.500 0.00 0.00 33.72 3.25
2312 4767 4.684623 CTGCCATTTGGTAGGGGG 57.315 61.111 6.79 0.00 43.16 5.40
2313 4768 1.697297 CTGCCATTTGGTAGGGGGT 59.303 57.895 6.79 0.00 43.16 4.95
2314 4769 0.041090 CTGCCATTTGGTAGGGGGTT 59.959 55.000 6.79 0.00 43.16 4.11
2315 4770 1.286553 CTGCCATTTGGTAGGGGGTTA 59.713 52.381 6.79 0.00 43.16 2.85
2316 4771 1.006162 TGCCATTTGGTAGGGGGTTAC 59.994 52.381 0.00 0.00 37.57 2.50
2317 4772 1.286849 GCCATTTGGTAGGGGGTTACT 59.713 52.381 0.00 0.00 37.57 2.24
2318 4773 2.685819 GCCATTTGGTAGGGGGTTACTC 60.686 54.545 0.00 0.00 37.57 2.59
2319 4774 2.578940 CCATTTGGTAGGGGGTTACTCA 59.421 50.000 0.00 0.00 0.00 3.41
2320 4775 3.204382 CCATTTGGTAGGGGGTTACTCAT 59.796 47.826 0.00 0.00 0.00 2.90
2321 4776 4.461198 CATTTGGTAGGGGGTTACTCATC 58.539 47.826 0.00 0.00 0.00 2.92
2322 4777 2.953093 TGGTAGGGGGTTACTCATCA 57.047 50.000 0.00 0.00 0.00 3.07
2323 4778 2.474112 TGGTAGGGGGTTACTCATCAC 58.526 52.381 0.00 0.00 0.00 3.06
2324 4779 1.767088 GGTAGGGGGTTACTCATCACC 59.233 57.143 0.00 0.00 0.00 4.02
2329 4784 2.884894 GGGTTACTCATCACCCGTAG 57.115 55.000 0.00 0.00 43.54 3.51
2343 4798 3.406682 CGTAGGGAGCGTACGTTTT 57.593 52.632 17.90 2.80 41.33 2.43
2344 4799 1.262882 CGTAGGGAGCGTACGTTTTC 58.737 55.000 17.90 11.91 41.33 2.29
2345 4800 1.401409 CGTAGGGAGCGTACGTTTTCA 60.401 52.381 17.90 0.00 41.33 2.69
2346 4801 2.257034 GTAGGGAGCGTACGTTTTCAG 58.743 52.381 17.90 0.00 0.00 3.02
2347 4802 0.963962 AGGGAGCGTACGTTTTCAGA 59.036 50.000 17.90 0.00 0.00 3.27
2348 4803 1.067776 AGGGAGCGTACGTTTTCAGAG 60.068 52.381 17.90 0.00 0.00 3.35
2349 4804 0.714439 GGAGCGTACGTTTTCAGAGC 59.286 55.000 17.90 0.00 0.00 4.09
2350 4805 0.362512 GAGCGTACGTTTTCAGAGCG 59.637 55.000 17.90 0.00 0.00 5.03
2351 4806 1.007336 AGCGTACGTTTTCAGAGCGG 61.007 55.000 17.90 0.00 0.00 5.52
2352 4807 1.005294 GCGTACGTTTTCAGAGCGGA 61.005 55.000 17.90 0.00 0.00 5.54
2353 4808 0.982673 CGTACGTTTTCAGAGCGGAG 59.017 55.000 7.22 0.00 0.00 4.63
2354 4809 1.347320 GTACGTTTTCAGAGCGGAGG 58.653 55.000 0.00 0.00 0.00 4.30
2355 4810 0.389426 TACGTTTTCAGAGCGGAGGC 60.389 55.000 0.00 0.00 40.37 4.70
2356 4811 2.730672 CGTTTTCAGAGCGGAGGCG 61.731 63.158 0.00 0.00 46.35 5.52
2357 4812 1.668151 GTTTTCAGAGCGGAGGCGT 60.668 57.895 0.00 0.00 46.35 5.68
2358 4813 1.374252 TTTTCAGAGCGGAGGCGTC 60.374 57.895 0.00 0.00 46.35 5.19
2359 4814 3.626680 TTTCAGAGCGGAGGCGTCG 62.627 63.158 0.00 0.00 46.35 5.12
2376 4831 3.414700 GCCCACTGACGCGTCAAG 61.415 66.667 38.11 31.37 39.39 3.02
2377 4832 2.738521 CCCACTGACGCGTCAAGG 60.739 66.667 38.11 36.66 39.39 3.61
2378 4833 3.414700 CCACTGACGCGTCAAGGC 61.415 66.667 38.11 15.50 39.39 4.35
2379 4834 3.414700 CACTGACGCGTCAAGGCC 61.415 66.667 38.11 14.74 39.39 5.19
2380 4835 3.616721 ACTGACGCGTCAAGGCCT 61.617 61.111 38.11 17.96 39.39 5.19
2381 4836 2.811317 CTGACGCGTCAAGGCCTC 60.811 66.667 38.11 13.20 39.39 4.70
2382 4837 4.717629 TGACGCGTCAAGGCCTCG 62.718 66.667 37.68 7.64 36.53 4.63
2383 4838 4.415332 GACGCGTCAAGGCCTCGA 62.415 66.667 33.09 2.95 0.00 4.04
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 3.027412 TCCTTGCTCTCCACTCTACATC 58.973 50.000 0.00 0.00 0.00 3.06
35 36 1.955778 CAAGCATTTGTGGTCTGGTCA 59.044 47.619 0.00 0.00 0.00 4.02
57 67 0.689623 CTCCACTCCACTGGAAAGCT 59.310 55.000 0.00 0.00 39.97 3.74
96 106 6.349860 GCTAGGAGTAGGAAATAGAGCTAAGC 60.350 46.154 0.00 0.00 0.00 3.09
100 110 4.107311 AGGCTAGGAGTAGGAAATAGAGCT 59.893 45.833 0.00 0.00 0.00 4.09
104 114 4.742012 TGGAGGCTAGGAGTAGGAAATAG 58.258 47.826 0.00 0.00 0.00 1.73
130 140 2.229784 GACTGTTTTGGCTTCATCCTGG 59.770 50.000 0.00 0.00 0.00 4.45
155 165 1.971167 GGGACTGCGCACCAAATCA 60.971 57.895 17.82 0.00 0.00 2.57
165 179 2.187946 GACAGGATGGGGACTGCG 59.812 66.667 0.00 0.00 43.62 5.18
168 211 0.344790 ATGAGGACAGGATGGGGACT 59.655 55.000 0.00 0.00 43.62 3.85
169 212 0.761802 GATGAGGACAGGATGGGGAC 59.238 60.000 0.00 0.00 43.62 4.46
176 219 1.342474 GGTGGAGAGATGAGGACAGGA 60.342 57.143 0.00 0.00 0.00 3.86
177 220 1.118838 GGTGGAGAGATGAGGACAGG 58.881 60.000 0.00 0.00 0.00 4.00
178 221 0.743688 CGGTGGAGAGATGAGGACAG 59.256 60.000 0.00 0.00 0.00 3.51
179 222 1.323271 GCGGTGGAGAGATGAGGACA 61.323 60.000 0.00 0.00 0.00 4.02
180 223 1.323271 TGCGGTGGAGAGATGAGGAC 61.323 60.000 0.00 0.00 0.00 3.85
181 224 1.000359 TGCGGTGGAGAGATGAGGA 60.000 57.895 0.00 0.00 0.00 3.71
182 225 1.440893 CTGCGGTGGAGAGATGAGG 59.559 63.158 0.00 0.00 0.00 3.86
183 226 1.227205 GCTGCGGTGGAGAGATGAG 60.227 63.158 0.00 0.00 0.00 2.90
184 227 2.895680 GCTGCGGTGGAGAGATGA 59.104 61.111 0.00 0.00 0.00 2.92
185 228 2.584418 CGCTGCGGTGGAGAGATG 60.584 66.667 15.40 0.00 0.00 2.90
186 229 3.842923 CCGCTGCGGTGGAGAGAT 61.843 66.667 31.72 0.00 45.39 2.75
201 244 1.138859 TGCAAGATGGATGGTACTCCG 59.861 52.381 0.00 0.00 38.21 4.63
247 291 5.587388 TGCGGCTTACTTACTTACTGTAT 57.413 39.130 0.00 0.00 0.00 2.29
276 320 0.744874 CCTGCCTGCCTGAAATCATG 59.255 55.000 0.00 0.00 0.00 3.07
277 321 0.333993 ACCTGCCTGCCTGAAATCAT 59.666 50.000 0.00 0.00 0.00 2.45
278 322 0.991146 TACCTGCCTGCCTGAAATCA 59.009 50.000 0.00 0.00 0.00 2.57
279 323 1.673168 CTACCTGCCTGCCTGAAATC 58.327 55.000 0.00 0.00 0.00 2.17
296 340 2.959030 CGGATGGATCACTTGACTCCTA 59.041 50.000 0.00 0.00 0.00 2.94
300 344 1.482593 GGACGGATGGATCACTTGACT 59.517 52.381 0.00 0.00 0.00 3.41
343 672 3.822167 TGTCGTAGTACCATGTTCAGTCA 59.178 43.478 0.00 0.00 0.00 3.41
351 680 3.620929 ATAGCGTGTCGTAGTACCATG 57.379 47.619 0.00 0.00 0.00 3.66
375 715 2.565841 AGTGAGAAAACGAAAGCAGCT 58.434 42.857 0.00 0.00 0.00 4.24
424 768 1.729284 ATTACCGGCTACCAAACGTG 58.271 50.000 0.00 0.00 0.00 4.49
462 815 2.203195 TTGTGGCTCAAGCGTGCT 60.203 55.556 0.00 0.00 43.26 4.40
471 824 2.289002 CACTGAACTGAACTTGTGGCTC 59.711 50.000 0.00 0.00 0.00 4.70
472 825 2.092968 TCACTGAACTGAACTTGTGGCT 60.093 45.455 0.00 0.00 0.00 4.75
473 826 2.288666 TCACTGAACTGAACTTGTGGC 58.711 47.619 0.00 0.00 0.00 5.01
474 827 3.242870 GCTTCACTGAACTGAACTTGTGG 60.243 47.826 0.00 0.00 0.00 4.17
475 828 3.374988 TGCTTCACTGAACTGAACTTGTG 59.625 43.478 0.00 0.00 0.00 3.33
476 829 3.609853 TGCTTCACTGAACTGAACTTGT 58.390 40.909 0.00 0.00 0.00 3.16
477 830 4.621068 TTGCTTCACTGAACTGAACTTG 57.379 40.909 0.00 0.00 0.00 3.16
478 831 4.437390 CGTTTGCTTCACTGAACTGAACTT 60.437 41.667 0.00 0.00 0.00 2.66
479 832 3.063997 CGTTTGCTTCACTGAACTGAACT 59.936 43.478 0.00 0.00 0.00 3.01
480 833 3.354397 CGTTTGCTTCACTGAACTGAAC 58.646 45.455 0.00 0.00 0.00 3.18
481 834 2.223249 GCGTTTGCTTCACTGAACTGAA 60.223 45.455 0.00 0.00 38.39 3.02
482 835 1.330521 GCGTTTGCTTCACTGAACTGA 59.669 47.619 0.00 0.00 38.39 3.41
489 857 2.477176 TTGGCGCGTTTGCTTCACT 61.477 52.632 8.43 0.00 39.65 3.41
503 871 4.918810 TGAAAGAGAAGGAAAAGTTGGC 57.081 40.909 0.00 0.00 0.00 4.52
504 872 6.036470 GTGTTGAAAGAGAAGGAAAAGTTGG 58.964 40.000 0.00 0.00 0.00 3.77
507 875 7.993183 TCATAGTGTTGAAAGAGAAGGAAAAGT 59.007 33.333 0.00 0.00 0.00 2.66
509 877 8.746052 TTCATAGTGTTGAAAGAGAAGGAAAA 57.254 30.769 0.00 0.00 32.82 2.29
510 878 8.924511 ATTCATAGTGTTGAAAGAGAAGGAAA 57.075 30.769 0.00 0.00 38.98 3.13
513 881 8.558973 AGAATTCATAGTGTTGAAAGAGAAGG 57.441 34.615 8.44 0.00 38.98 3.46
514 882 9.823098 CAAGAATTCATAGTGTTGAAAGAGAAG 57.177 33.333 8.44 0.00 38.98 2.85
515 883 9.559732 TCAAGAATTCATAGTGTTGAAAGAGAA 57.440 29.630 8.44 0.00 38.98 2.87
518 886 7.939039 AGGTCAAGAATTCATAGTGTTGAAAGA 59.061 33.333 8.44 0.00 38.98 2.52
520 888 7.095229 CGAGGTCAAGAATTCATAGTGTTGAAA 60.095 37.037 8.44 0.00 38.98 2.69
521 889 6.368791 CGAGGTCAAGAATTCATAGTGTTGAA 59.631 38.462 8.44 0.00 34.13 2.69
523 891 5.446473 GCGAGGTCAAGAATTCATAGTGTTG 60.446 44.000 8.44 2.49 0.00 3.33
524 892 4.631813 GCGAGGTCAAGAATTCATAGTGTT 59.368 41.667 8.44 0.00 0.00 3.32
525 893 4.081420 AGCGAGGTCAAGAATTCATAGTGT 60.081 41.667 8.44 0.00 0.00 3.55
528 896 4.686972 TCAGCGAGGTCAAGAATTCATAG 58.313 43.478 8.44 0.00 0.00 2.23
529 897 4.736126 TCAGCGAGGTCAAGAATTCATA 57.264 40.909 8.44 0.00 0.00 2.15
530 898 3.616956 TCAGCGAGGTCAAGAATTCAT 57.383 42.857 8.44 0.00 0.00 2.57
531 899 3.401033 TTCAGCGAGGTCAAGAATTCA 57.599 42.857 8.44 0.00 0.00 2.57
533 901 3.999663 CTCTTTCAGCGAGGTCAAGAATT 59.000 43.478 0.00 0.00 0.00 2.17
534 902 3.259374 TCTCTTTCAGCGAGGTCAAGAAT 59.741 43.478 0.00 0.00 0.00 2.40
536 904 2.239400 TCTCTTTCAGCGAGGTCAAGA 58.761 47.619 0.00 0.00 0.00 3.02
537 905 2.732412 TCTCTTTCAGCGAGGTCAAG 57.268 50.000 0.00 0.00 0.00 3.02
538 906 2.932622 GCATCTCTTTCAGCGAGGTCAA 60.933 50.000 0.00 0.00 0.00 3.18
542 933 1.288350 CAGCATCTCTTTCAGCGAGG 58.712 55.000 0.00 0.00 0.00 4.63
553 979 2.160417 GTGCAAGTTACCACAGCATCTC 59.840 50.000 0.00 0.00 38.15 2.75
566 992 1.133199 TGGGAATGGAAGGTGCAAGTT 60.133 47.619 0.00 0.00 0.00 2.66
567 993 0.482446 TGGGAATGGAAGGTGCAAGT 59.518 50.000 0.00 0.00 0.00 3.16
568 994 1.479323 CATGGGAATGGAAGGTGCAAG 59.521 52.381 0.00 0.00 0.00 4.01
569 995 1.559368 CATGGGAATGGAAGGTGCAA 58.441 50.000 0.00 0.00 0.00 4.08
570 996 0.324552 CCATGGGAATGGAAGGTGCA 60.325 55.000 2.85 0.00 44.39 4.57
571 997 0.033208 TCCATGGGAATGGAAGGTGC 60.033 55.000 13.02 0.00 46.90 5.01
601 1035 3.058432 TGAAAGACGAGACAAGTAGGACG 60.058 47.826 0.00 0.00 0.00 4.79
604 1038 3.256136 AGGTGAAAGACGAGACAAGTAGG 59.744 47.826 0.00 0.00 0.00 3.18
605 1039 4.506886 AGGTGAAAGACGAGACAAGTAG 57.493 45.455 0.00 0.00 0.00 2.57
690 1192 2.743928 GCTGCGGTGAGGTTGAGG 60.744 66.667 0.00 0.00 0.00 3.86
703 1205 2.416547 TCTGCGTTTCTAATTCAGCTGC 59.583 45.455 9.47 0.00 0.00 5.25
704 1206 4.330894 TCATCTGCGTTTCTAATTCAGCTG 59.669 41.667 7.63 7.63 0.00 4.24
709 1211 3.002759 GGGCTCATCTGCGTTTCTAATTC 59.997 47.826 0.00 0.00 0.00 2.17
714 1216 0.036732 TTGGGCTCATCTGCGTTTCT 59.963 50.000 0.00 0.00 0.00 2.52
720 2921 1.202382 GCTGATTTTGGGCTCATCTGC 60.202 52.381 2.30 2.30 35.54 4.26
722 2923 1.772836 GGCTGATTTTGGGCTCATCT 58.227 50.000 0.00 0.00 0.00 2.90
723 2924 0.383231 CGGCTGATTTTGGGCTCATC 59.617 55.000 0.00 0.00 0.00 2.92
728 2929 1.976474 TCACCGGCTGATTTTGGGC 60.976 57.895 0.00 0.00 0.00 5.36
744 2945 2.031919 GTGGTGACATGGCCGTCA 59.968 61.111 9.19 9.19 46.14 4.35
745 2946 2.746277 GGTGGTGACATGGCCGTC 60.746 66.667 0.00 0.00 46.14 4.79
746 2947 4.697756 CGGTGGTGACATGGCCGT 62.698 66.667 0.00 0.00 46.14 5.68
749 2950 1.014352 GATTACGGTGGTGACATGGC 58.986 55.000 0.00 0.00 46.14 4.40
750 2951 1.663695 GGATTACGGTGGTGACATGG 58.336 55.000 0.00 0.00 46.14 3.66
751 2952 1.286501 CGGATTACGGTGGTGACATG 58.713 55.000 0.00 0.00 46.14 3.21
752 2953 3.752796 CGGATTACGGTGGTGACAT 57.247 52.632 0.00 0.00 46.14 3.06
952 3171 4.211920 TCTTGGGAATCTTGTTTTTCGGT 58.788 39.130 0.00 0.00 0.00 4.69
970 3189 2.730672 CGGTCGCCGCTTCTTCTTG 61.731 63.158 5.38 0.00 41.17 3.02
1377 3616 2.267324 GCCAGAGAGGGTCACTGC 59.733 66.667 0.00 0.00 34.41 4.40
1393 3632 3.541713 CTACAGGAGGGGGCGAGC 61.542 72.222 0.00 0.00 0.00 5.03
1407 3657 6.040391 AGCCTGAACTCAATCTACTGATCTAC 59.960 42.308 0.00 0.00 31.51 2.59
1412 3662 3.368843 GCAGCCTGAACTCAATCTACTGA 60.369 47.826 0.00 0.00 0.00 3.41
1469 3749 8.593679 TGAACTGAATTGAAGACCTAGATTACA 58.406 33.333 0.00 0.00 0.00 2.41
1470 3750 9.606631 ATGAACTGAATTGAAGACCTAGATTAC 57.393 33.333 0.00 0.00 0.00 1.89
1529 3820 2.790433 TGAAAAGGAAGGATGAACCCG 58.210 47.619 0.00 0.00 40.05 5.28
1536 3827 5.527026 AGAACAGGATGAAAAGGAAGGAT 57.473 39.130 0.00 0.00 39.69 3.24
1574 3865 7.349711 CCAGAATTTCAGTTGCAATGAAAAAG 58.650 34.615 26.25 19.32 46.52 2.27
1593 3918 2.505819 ACATCTCGTAAAGCCCCAGAAT 59.494 45.455 0.00 0.00 0.00 2.40
1595 3920 1.568504 ACATCTCGTAAAGCCCCAGA 58.431 50.000 0.00 0.00 0.00 3.86
1596 3921 2.009774 CAACATCTCGTAAAGCCCCAG 58.990 52.381 0.00 0.00 0.00 4.45
1600 3992 4.433615 TCATCTCAACATCTCGTAAAGCC 58.566 43.478 0.00 0.00 0.00 4.35
1607 3999 3.186613 CCATGCATCATCTCAACATCTCG 59.813 47.826 0.00 0.00 0.00 4.04
1665 4063 5.256474 ACAGTGCTGCCAAGAGTTAATAAT 58.744 37.500 0.00 0.00 0.00 1.28
1666 4064 4.651778 ACAGTGCTGCCAAGAGTTAATAA 58.348 39.130 0.00 0.00 0.00 1.40
1667 4065 4.286297 ACAGTGCTGCCAAGAGTTAATA 57.714 40.909 0.00 0.00 0.00 0.98
1715 4113 2.161012 GCCATTGACATGTCTGACAGTG 59.839 50.000 25.55 12.94 35.58 3.66
1729 4127 3.295093 TGAAAGACTGTTTGGCCATTGA 58.705 40.909 6.09 0.00 0.00 2.57
1834 4280 5.586243 CAGGCAGTTAGTACTAGTAACCGTA 59.414 44.000 3.61 0.00 35.19 4.02
1846 4292 5.450550 CGATCTGATTCACAGGCAGTTAGTA 60.451 44.000 0.00 0.00 45.76 1.82
1848 4294 3.801050 CGATCTGATTCACAGGCAGTTAG 59.199 47.826 0.00 0.00 45.76 2.34
1849 4295 3.785486 CGATCTGATTCACAGGCAGTTA 58.215 45.455 0.00 0.00 45.76 2.24
1851 4297 1.741732 GCGATCTGATTCACAGGCAGT 60.742 52.381 0.00 0.00 45.76 4.40
1852 4298 0.935898 GCGATCTGATTCACAGGCAG 59.064 55.000 0.00 0.00 45.76 4.85
1853 4299 0.249955 TGCGATCTGATTCACAGGCA 59.750 50.000 0.00 0.00 45.76 4.75
1854 4300 0.654683 GTGCGATCTGATTCACAGGC 59.345 55.000 14.85 0.00 45.76 4.85
1874 4320 4.607293 TTCTTCTGAAGCTGAAGCAGTA 57.393 40.909 12.54 0.00 45.16 2.74
1877 4323 3.544684 TGTTTCTTCTGAAGCTGAAGCA 58.455 40.909 12.54 7.72 45.16 3.91
1879 4325 5.936686 TCATGTTTCTTCTGAAGCTGAAG 57.063 39.130 12.54 6.04 39.62 3.02
1885 4331 9.856488 ATTGATTCATTCATGTTTCTTCTGAAG 57.144 29.630 11.18 11.18 33.34 3.02
1889 4335 7.608153 TGCATTGATTCATTCATGTTTCTTCT 58.392 30.769 0.00 0.00 33.34 2.85
1908 4358 6.568081 GCTCCTATTCATTTCTAGCTGCATTG 60.568 42.308 1.02 0.00 0.00 2.82
1918 4368 5.854010 TCGTAGTGCTCCTATTCATTTCT 57.146 39.130 0.00 0.00 0.00 2.52
1935 4385 5.465724 GCTTTGATGGGGTACTATTTCGTAG 59.534 44.000 0.00 0.00 36.44 3.51
1937 4387 4.196971 GCTTTGATGGGGTACTATTTCGT 58.803 43.478 0.00 0.00 0.00 3.85
1939 4389 6.524101 TTTGCTTTGATGGGGTACTATTTC 57.476 37.500 0.00 0.00 0.00 2.17
1943 4393 6.126409 CCTAATTTGCTTTGATGGGGTACTA 58.874 40.000 0.00 0.00 0.00 1.82
1945 4395 4.709886 ACCTAATTTGCTTTGATGGGGTAC 59.290 41.667 0.00 0.00 0.00 3.34
1946 4396 4.709397 CACCTAATTTGCTTTGATGGGGTA 59.291 41.667 0.00 0.00 0.00 3.69
1948 4398 3.679639 GCACCTAATTTGCTTTGATGGGG 60.680 47.826 0.00 0.00 37.00 4.96
1949 4399 3.524541 GCACCTAATTTGCTTTGATGGG 58.475 45.455 0.00 0.00 37.00 4.00
1988 4438 2.159014 GGCCAAACGGAAAGGTTTCTTT 60.159 45.455 0.00 0.00 45.09 2.52
1989 4439 1.411246 GGCCAAACGGAAAGGTTTCTT 59.589 47.619 0.00 0.00 38.01 2.52
1990 4440 1.037493 GGCCAAACGGAAAGGTTTCT 58.963 50.000 0.00 0.00 38.01 2.52
2010 4460 3.554692 CGCTTCGGTGATGACGCC 61.555 66.667 0.00 0.00 42.65 5.68
2012 4462 1.006825 TTGACGCTTCGGTGATGACG 61.007 55.000 0.00 0.00 0.00 4.35
2013 4463 0.716108 CTTGACGCTTCGGTGATGAC 59.284 55.000 0.00 0.00 0.00 3.06
2014 4464 0.389817 CCTTGACGCTTCGGTGATGA 60.390 55.000 0.00 0.00 0.00 2.92
2015 4465 1.970917 GCCTTGACGCTTCGGTGATG 61.971 60.000 0.00 0.00 0.00 3.07
2016 4466 1.741770 GCCTTGACGCTTCGGTGAT 60.742 57.895 0.00 0.00 0.00 3.06
2017 4467 2.357034 GCCTTGACGCTTCGGTGA 60.357 61.111 0.00 0.00 0.00 4.02
2018 4468 3.423154 GGCCTTGACGCTTCGGTG 61.423 66.667 0.00 0.00 0.00 4.94
2019 4469 3.591254 GAGGCCTTGACGCTTCGGT 62.591 63.158 6.77 0.00 0.00 4.69
2020 4470 2.815647 GAGGCCTTGACGCTTCGG 60.816 66.667 6.77 0.00 0.00 4.30
2021 4471 1.667830 TTGAGGCCTTGACGCTTCG 60.668 57.895 6.77 0.00 37.66 3.79
2022 4472 1.578206 GGTTGAGGCCTTGACGCTTC 61.578 60.000 6.77 0.00 35.53 3.86
2023 4473 1.600916 GGTTGAGGCCTTGACGCTT 60.601 57.895 6.77 0.00 0.00 4.68
2024 4474 2.032681 GGTTGAGGCCTTGACGCT 59.967 61.111 6.77 0.00 0.00 5.07
2025 4475 1.452145 TTTGGTTGAGGCCTTGACGC 61.452 55.000 6.77 4.07 0.00 5.19
2026 4476 1.200020 GATTTGGTTGAGGCCTTGACG 59.800 52.381 6.77 0.00 0.00 4.35
2027 4477 2.489722 GAGATTTGGTTGAGGCCTTGAC 59.510 50.000 6.77 8.97 0.00 3.18
2028 4478 2.376518 AGAGATTTGGTTGAGGCCTTGA 59.623 45.455 6.77 0.00 0.00 3.02
2029 4479 2.751806 GAGAGATTTGGTTGAGGCCTTG 59.248 50.000 6.77 0.00 0.00 3.61
2030 4480 2.616510 CGAGAGATTTGGTTGAGGCCTT 60.617 50.000 6.77 0.00 0.00 4.35
2031 4481 1.065854 CGAGAGATTTGGTTGAGGCCT 60.066 52.381 3.86 3.86 0.00 5.19
2032 4482 1.373570 CGAGAGATTTGGTTGAGGCC 58.626 55.000 0.00 0.00 0.00 5.19
2033 4483 0.729690 GCGAGAGATTTGGTTGAGGC 59.270 55.000 0.00 0.00 0.00 4.70
2034 4484 1.339055 TGGCGAGAGATTTGGTTGAGG 60.339 52.381 0.00 0.00 0.00 3.86
2035 4485 2.099141 TGGCGAGAGATTTGGTTGAG 57.901 50.000 0.00 0.00 0.00 3.02
2036 4486 2.027285 TGATGGCGAGAGATTTGGTTGA 60.027 45.455 0.00 0.00 0.00 3.18
2037 4487 2.096496 GTGATGGCGAGAGATTTGGTTG 59.904 50.000 0.00 0.00 0.00 3.77
2038 4488 2.359900 GTGATGGCGAGAGATTTGGTT 58.640 47.619 0.00 0.00 0.00 3.67
2039 4489 1.407437 GGTGATGGCGAGAGATTTGGT 60.407 52.381 0.00 0.00 0.00 3.67
2040 4490 1.303309 GGTGATGGCGAGAGATTTGG 58.697 55.000 0.00 0.00 0.00 3.28
2041 4491 2.028420 TGGTGATGGCGAGAGATTTG 57.972 50.000 0.00 0.00 0.00 2.32
2042 4492 2.636830 CTTGGTGATGGCGAGAGATTT 58.363 47.619 0.00 0.00 0.00 2.17
2043 4493 1.134280 CCTTGGTGATGGCGAGAGATT 60.134 52.381 0.00 0.00 0.00 2.40
2044 4494 0.467384 CCTTGGTGATGGCGAGAGAT 59.533 55.000 0.00 0.00 0.00 2.75
2045 4495 0.614697 TCCTTGGTGATGGCGAGAGA 60.615 55.000 0.00 0.00 0.00 3.10
2046 4496 0.250234 TTCCTTGGTGATGGCGAGAG 59.750 55.000 0.00 0.00 0.00 3.20
2047 4497 0.911769 ATTCCTTGGTGATGGCGAGA 59.088 50.000 0.00 0.00 0.00 4.04
2048 4498 1.755179 AATTCCTTGGTGATGGCGAG 58.245 50.000 0.00 0.00 0.00 5.03
2049 4499 2.639065 GTAATTCCTTGGTGATGGCGA 58.361 47.619 0.00 0.00 0.00 5.54
2050 4500 1.676006 GGTAATTCCTTGGTGATGGCG 59.324 52.381 0.00 0.00 0.00 5.69
2051 4501 2.031870 GGGTAATTCCTTGGTGATGGC 58.968 52.381 0.00 0.00 36.25 4.40
2052 4502 2.297701 CGGGTAATTCCTTGGTGATGG 58.702 52.381 0.00 0.00 36.25 3.51
2053 4503 2.297701 CCGGGTAATTCCTTGGTGATG 58.702 52.381 0.00 0.00 36.25 3.07
2054 4504 1.409661 GCCGGGTAATTCCTTGGTGAT 60.410 52.381 2.18 0.00 35.29 3.06
2055 4505 0.034863 GCCGGGTAATTCCTTGGTGA 60.035 55.000 2.18 0.00 35.29 4.02
2056 4506 0.322997 TGCCGGGTAATTCCTTGGTG 60.323 55.000 2.18 0.00 35.29 4.17
2057 4507 0.034477 CTGCCGGGTAATTCCTTGGT 60.034 55.000 2.18 0.00 35.29 3.67
2058 4508 0.254747 TCTGCCGGGTAATTCCTTGG 59.745 55.000 2.18 0.00 36.25 3.61
2059 4509 2.017049 CTTCTGCCGGGTAATTCCTTG 58.983 52.381 2.18 0.00 36.25 3.61
2060 4510 1.913419 TCTTCTGCCGGGTAATTCCTT 59.087 47.619 2.18 0.00 36.25 3.36
2061 4511 1.580059 TCTTCTGCCGGGTAATTCCT 58.420 50.000 2.18 0.00 36.25 3.36
2062 4512 2.158813 TCATCTTCTGCCGGGTAATTCC 60.159 50.000 2.18 0.00 0.00 3.01
2063 4513 3.194005 TCATCTTCTGCCGGGTAATTC 57.806 47.619 2.18 0.00 0.00 2.17
2064 4514 3.199946 TCTTCATCTTCTGCCGGGTAATT 59.800 43.478 2.18 0.00 0.00 1.40
2065 4515 2.771943 TCTTCATCTTCTGCCGGGTAAT 59.228 45.455 2.18 0.00 0.00 1.89
2066 4516 2.184533 TCTTCATCTTCTGCCGGGTAA 58.815 47.619 2.18 0.00 0.00 2.85
2067 4517 1.860641 TCTTCATCTTCTGCCGGGTA 58.139 50.000 2.18 0.00 0.00 3.69
2068 4518 1.134280 CATCTTCATCTTCTGCCGGGT 60.134 52.381 2.18 0.00 0.00 5.28
2069 4519 1.590932 CATCTTCATCTTCTGCCGGG 58.409 55.000 2.18 0.00 0.00 5.73
2070 4520 1.134280 ACCATCTTCATCTTCTGCCGG 60.134 52.381 0.00 0.00 0.00 6.13
2071 4521 2.322355 ACCATCTTCATCTTCTGCCG 57.678 50.000 0.00 0.00 0.00 5.69
2072 4522 3.563390 GCTTACCATCTTCATCTTCTGCC 59.437 47.826 0.00 0.00 0.00 4.85
2073 4523 3.247173 CGCTTACCATCTTCATCTTCTGC 59.753 47.826 0.00 0.00 0.00 4.26
2074 4524 3.806521 CCGCTTACCATCTTCATCTTCTG 59.193 47.826 0.00 0.00 0.00 3.02
2075 4525 3.706594 TCCGCTTACCATCTTCATCTTCT 59.293 43.478 0.00 0.00 0.00 2.85
2076 4526 3.804873 GTCCGCTTACCATCTTCATCTTC 59.195 47.826 0.00 0.00 0.00 2.87
2077 4527 3.738281 CGTCCGCTTACCATCTTCATCTT 60.738 47.826 0.00 0.00 0.00 2.40
2078 4528 2.223829 CGTCCGCTTACCATCTTCATCT 60.224 50.000 0.00 0.00 0.00 2.90
2079 4529 2.128035 CGTCCGCTTACCATCTTCATC 58.872 52.381 0.00 0.00 0.00 2.92
2080 4530 1.202533 CCGTCCGCTTACCATCTTCAT 60.203 52.381 0.00 0.00 0.00 2.57
2081 4531 0.174845 CCGTCCGCTTACCATCTTCA 59.825 55.000 0.00 0.00 0.00 3.02
2082 4532 0.529992 CCCGTCCGCTTACCATCTTC 60.530 60.000 0.00 0.00 0.00 2.87
2083 4533 1.262640 ACCCGTCCGCTTACCATCTT 61.263 55.000 0.00 0.00 0.00 2.40
2084 4534 1.673808 GACCCGTCCGCTTACCATCT 61.674 60.000 0.00 0.00 0.00 2.90
2085 4535 1.227176 GACCCGTCCGCTTACCATC 60.227 63.158 0.00 0.00 0.00 3.51
2086 4536 0.396139 TAGACCCGTCCGCTTACCAT 60.396 55.000 0.00 0.00 0.00 3.55
2087 4537 1.001020 TAGACCCGTCCGCTTACCA 60.001 57.895 0.00 0.00 0.00 3.25
2088 4538 1.435105 GTAGACCCGTCCGCTTACC 59.565 63.158 0.00 0.00 0.00 2.85
2089 4539 1.435105 GGTAGACCCGTCCGCTTAC 59.565 63.158 0.00 0.00 0.00 2.34
2090 4540 3.924507 GGTAGACCCGTCCGCTTA 58.075 61.111 0.00 0.00 0.00 3.09
2099 4549 1.226888 GTGATGACGCGGTAGACCC 60.227 63.158 12.47 0.00 0.00 4.46
2100 4550 0.525668 CAGTGATGACGCGGTAGACC 60.526 60.000 12.47 0.00 0.00 3.85
2101 4551 0.450583 TCAGTGATGACGCGGTAGAC 59.549 55.000 12.47 0.00 0.00 2.59
2102 4552 1.132453 CTTCAGTGATGACGCGGTAGA 59.868 52.381 12.47 0.00 0.00 2.59
2103 4553 1.550065 CTTCAGTGATGACGCGGTAG 58.450 55.000 12.47 0.00 0.00 3.18
2104 4554 0.457853 GCTTCAGTGATGACGCGGTA 60.458 55.000 12.47 0.00 0.00 4.02
2105 4555 1.738099 GCTTCAGTGATGACGCGGT 60.738 57.895 12.47 0.00 0.00 5.68
2106 4556 3.084579 GCTTCAGTGATGACGCGG 58.915 61.111 12.47 0.00 0.00 6.46
2107 4557 2.691522 CGCTTCAGTGATGACGCG 59.308 61.111 13.42 13.42 46.67 6.01
2108 4558 1.008875 TGACGCTTCAGTGATGACGC 61.009 55.000 10.08 9.12 0.00 5.19
2109 4559 1.388093 CTTGACGCTTCAGTGATGACG 59.612 52.381 10.08 13.59 31.71 4.35
2110 4560 1.728971 CCTTGACGCTTCAGTGATGAC 59.271 52.381 10.08 1.21 31.71 3.06
2111 4561 1.941209 GCCTTGACGCTTCAGTGATGA 60.941 52.381 10.08 0.00 31.71 2.92
2112 4562 0.445436 GCCTTGACGCTTCAGTGATG 59.555 55.000 0.00 0.00 31.71 3.07
2128 4578 0.827368 GAGAGAATCGGTTGAGGCCT 59.173 55.000 3.86 3.86 42.67 5.19
2139 4589 2.223923 CCTCGGTGATGGTGAGAGAATC 60.224 54.545 0.00 0.00 31.31 2.52
2157 4612 1.301677 CTTCTGCCGGTTTGCTCCTC 61.302 60.000 1.90 0.00 0.00 3.71
2158 4613 1.302832 CTTCTGCCGGTTTGCTCCT 60.303 57.895 1.90 0.00 0.00 3.69
2162 4617 0.881118 TTCATCTTCTGCCGGTTTGC 59.119 50.000 1.90 0.00 0.00 3.68
2191 4646 9.146984 CGCTGAATATTTATTTATTCCTCGGTA 57.853 33.333 0.00 0.00 37.65 4.02
2192 4647 7.660208 ACGCTGAATATTTATTTATTCCTCGGT 59.340 33.333 14.04 3.09 37.65 4.69
2193 4648 8.029642 ACGCTGAATATTTATTTATTCCTCGG 57.970 34.615 14.04 0.00 37.65 4.63
2194 4649 8.708742 TGACGCTGAATATTTATTTATTCCTCG 58.291 33.333 0.00 10.69 37.65 4.63
2196 4651 9.003658 CCTGACGCTGAATATTTATTTATTCCT 57.996 33.333 0.00 0.00 37.65 3.36
2197 4652 7.750903 GCCTGACGCTGAATATTTATTTATTCC 59.249 37.037 0.00 0.00 37.65 3.01
2198 4653 7.750903 GGCCTGACGCTGAATATTTATTTATTC 59.249 37.037 0.00 0.00 38.51 1.75
2199 4654 7.448469 AGGCCTGACGCTGAATATTTATTTATT 59.552 33.333 3.11 0.00 37.74 1.40
2200 4655 6.942576 AGGCCTGACGCTGAATATTTATTTAT 59.057 34.615 3.11 0.00 37.74 1.40
2201 4656 6.296026 AGGCCTGACGCTGAATATTTATTTA 58.704 36.000 3.11 0.00 37.74 1.40
2202 4657 5.133221 AGGCCTGACGCTGAATATTTATTT 58.867 37.500 3.11 0.00 37.74 1.40
2203 4658 4.718961 AGGCCTGACGCTGAATATTTATT 58.281 39.130 3.11 0.00 37.74 1.40
2204 4659 4.319177 GAGGCCTGACGCTGAATATTTAT 58.681 43.478 12.00 0.00 37.74 1.40
2205 4660 3.728845 GAGGCCTGACGCTGAATATTTA 58.271 45.455 12.00 0.00 37.74 1.40
2206 4661 2.565841 GAGGCCTGACGCTGAATATTT 58.434 47.619 12.00 0.00 37.74 1.40
2207 4662 1.539065 CGAGGCCTGACGCTGAATATT 60.539 52.381 12.00 0.00 37.74 1.28
2208 4663 0.032678 CGAGGCCTGACGCTGAATAT 59.967 55.000 12.00 0.00 37.74 1.28
2209 4664 1.035385 TCGAGGCCTGACGCTGAATA 61.035 55.000 12.00 0.00 37.74 1.75
2210 4665 2.185350 CGAGGCCTGACGCTGAAT 59.815 61.111 12.00 0.00 37.74 2.57
2211 4666 2.989253 TCGAGGCCTGACGCTGAA 60.989 61.111 12.00 0.00 37.74 3.02
2212 4667 3.749064 GTCGAGGCCTGACGCTGA 61.749 66.667 12.00 0.00 37.74 4.26
2213 4668 4.803426 GGTCGAGGCCTGACGCTG 62.803 72.222 12.00 0.00 37.22 5.18
2215 4670 3.665675 ATTGGTCGAGGCCTGACGC 62.666 63.158 12.00 12.38 37.22 5.19
2216 4671 1.079127 AATTGGTCGAGGCCTGACG 60.079 57.895 12.00 9.25 37.22 4.35
2217 4672 1.648467 GCAATTGGTCGAGGCCTGAC 61.648 60.000 12.00 18.06 35.60 3.51
2218 4673 1.377202 GCAATTGGTCGAGGCCTGA 60.377 57.895 12.00 5.19 0.00 3.86
2219 4674 1.377725 AGCAATTGGTCGAGGCCTG 60.378 57.895 12.00 2.19 0.00 4.85
2220 4675 1.377725 CAGCAATTGGTCGAGGCCT 60.378 57.895 3.86 3.86 0.00 5.19
2221 4676 3.056313 GCAGCAATTGGTCGAGGCC 62.056 63.158 7.29 0.00 0.00 5.19
2222 4677 2.334946 TGCAGCAATTGGTCGAGGC 61.335 57.895 7.29 8.87 0.00 4.70
2223 4678 1.236616 TGTGCAGCAATTGGTCGAGG 61.237 55.000 7.29 0.00 0.00 4.63
2224 4679 0.592637 TTGTGCAGCAATTGGTCGAG 59.407 50.000 7.29 0.00 31.07 4.04
2225 4680 1.246649 ATTGTGCAGCAATTGGTCGA 58.753 45.000 7.29 0.00 44.82 4.20
2226 4681 2.917701 TATTGTGCAGCAATTGGTCG 57.082 45.000 7.29 5.05 44.82 4.79
2227 4682 4.114794 GGATTATTGTGCAGCAATTGGTC 58.885 43.478 7.29 3.83 44.82 4.02
2228 4683 3.770933 AGGATTATTGTGCAGCAATTGGT 59.229 39.130 16.19 3.82 44.82 3.67
2229 4684 4.098960 AGAGGATTATTGTGCAGCAATTGG 59.901 41.667 16.19 0.00 44.82 3.16
2230 4685 5.041287 CAGAGGATTATTGTGCAGCAATTG 58.959 41.667 16.19 0.00 44.82 2.32
2231 4686 4.708421 ACAGAGGATTATTGTGCAGCAATT 59.292 37.500 16.19 3.80 44.82 2.32
2233 4688 3.689347 ACAGAGGATTATTGTGCAGCAA 58.311 40.909 0.00 4.56 41.89 3.91
2234 4689 3.354948 ACAGAGGATTATTGTGCAGCA 57.645 42.857 0.00 0.00 0.00 4.41
2235 4690 5.818136 TTTACAGAGGATTATTGTGCAGC 57.182 39.130 0.00 0.00 0.00 5.25
2236 4691 6.183360 CCCTTTTACAGAGGATTATTGTGCAG 60.183 42.308 0.00 0.00 36.33 4.41
2237 4692 5.652014 CCCTTTTACAGAGGATTATTGTGCA 59.348 40.000 0.00 0.00 36.33 4.57
2238 4693 5.885912 TCCCTTTTACAGAGGATTATTGTGC 59.114 40.000 0.00 0.00 36.33 4.57
2239 4694 6.038714 GCTCCCTTTTACAGAGGATTATTGTG 59.961 42.308 0.00 0.00 36.33 3.33
2240 4695 6.122964 GCTCCCTTTTACAGAGGATTATTGT 58.877 40.000 0.00 0.00 36.33 2.71
2241 4696 6.122277 TGCTCCCTTTTACAGAGGATTATTG 58.878 40.000 0.00 0.00 36.33 1.90
2242 4697 6.158695 TCTGCTCCCTTTTACAGAGGATTATT 59.841 38.462 0.00 0.00 36.33 1.40
2243 4698 5.667626 TCTGCTCCCTTTTACAGAGGATTAT 59.332 40.000 0.00 0.00 36.33 1.28
2244 4699 5.030147 TCTGCTCCCTTTTACAGAGGATTA 58.970 41.667 0.00 0.00 36.33 1.75
2245 4700 3.846588 TCTGCTCCCTTTTACAGAGGATT 59.153 43.478 0.00 0.00 36.33 3.01
2246 4701 3.454858 TCTGCTCCCTTTTACAGAGGAT 58.545 45.455 0.00 0.00 36.33 3.24
2247 4702 2.902608 TCTGCTCCCTTTTACAGAGGA 58.097 47.619 0.00 0.00 36.33 3.71
2248 4703 3.604582 CTTCTGCTCCCTTTTACAGAGG 58.395 50.000 0.00 0.00 40.08 3.69
2249 4704 3.006247 GCTTCTGCTCCCTTTTACAGAG 58.994 50.000 0.00 0.00 40.08 3.35
2250 4705 2.371841 TGCTTCTGCTCCCTTTTACAGA 59.628 45.455 0.00 0.00 40.48 3.41
2251 4706 2.783135 TGCTTCTGCTCCCTTTTACAG 58.217 47.619 0.00 0.00 40.48 2.74
2252 4707 2.949177 TGCTTCTGCTCCCTTTTACA 57.051 45.000 0.00 0.00 40.48 2.41
2253 4708 3.507622 ACATTGCTTCTGCTCCCTTTTAC 59.492 43.478 0.00 0.00 40.48 2.01
2254 4709 3.766545 ACATTGCTTCTGCTCCCTTTTA 58.233 40.909 0.00 0.00 40.48 1.52
2255 4710 2.601905 ACATTGCTTCTGCTCCCTTTT 58.398 42.857 0.00 0.00 40.48 2.27
2256 4711 2.299326 ACATTGCTTCTGCTCCCTTT 57.701 45.000 0.00 0.00 40.48 3.11
2257 4712 2.307098 AGTACATTGCTTCTGCTCCCTT 59.693 45.455 0.00 0.00 40.48 3.95
2258 4713 1.912043 AGTACATTGCTTCTGCTCCCT 59.088 47.619 0.00 0.00 40.48 4.20
2259 4714 2.409948 AGTACATTGCTTCTGCTCCC 57.590 50.000 0.00 0.00 40.48 4.30
2266 4721 7.754027 TCTTAACGAGTAGAAGTACATTGCTTC 59.246 37.037 0.00 0.00 41.78 3.86
2267 4722 7.600065 TCTTAACGAGTAGAAGTACATTGCTT 58.400 34.615 0.00 0.00 0.00 3.91
2268 4723 7.154435 TCTTAACGAGTAGAAGTACATTGCT 57.846 36.000 0.00 0.00 0.00 3.91
2269 4724 7.807687 TTCTTAACGAGTAGAAGTACATTGC 57.192 36.000 0.00 0.00 0.00 3.56
2270 4725 9.408069 AGTTTCTTAACGAGTAGAAGTACATTG 57.592 33.333 0.00 0.00 39.31 2.82
2271 4726 9.408069 CAGTTTCTTAACGAGTAGAAGTACATT 57.592 33.333 0.00 0.00 39.31 2.71
2272 4727 7.541437 GCAGTTTCTTAACGAGTAGAAGTACAT 59.459 37.037 0.00 0.00 39.31 2.29
2273 4728 6.860023 GCAGTTTCTTAACGAGTAGAAGTACA 59.140 38.462 0.00 0.00 39.31 2.90
2274 4729 6.307558 GGCAGTTTCTTAACGAGTAGAAGTAC 59.692 42.308 0.00 0.00 39.31 2.73
2275 4730 6.016024 TGGCAGTTTCTTAACGAGTAGAAGTA 60.016 38.462 0.00 0.00 39.31 2.24
2276 4731 5.221382 TGGCAGTTTCTTAACGAGTAGAAGT 60.221 40.000 0.00 0.00 39.31 3.01
2277 4732 5.227908 TGGCAGTTTCTTAACGAGTAGAAG 58.772 41.667 0.00 0.00 39.31 2.85
2278 4733 5.204409 TGGCAGTTTCTTAACGAGTAGAA 57.796 39.130 0.00 0.00 39.31 2.10
2279 4734 4.859304 TGGCAGTTTCTTAACGAGTAGA 57.141 40.909 0.00 0.00 39.31 2.59
2280 4735 6.307155 CAAATGGCAGTTTCTTAACGAGTAG 58.693 40.000 0.00 0.00 39.31 2.57
2281 4736 5.180492 CCAAATGGCAGTTTCTTAACGAGTA 59.820 40.000 0.00 0.00 39.31 2.59
2282 4737 4.023193 CCAAATGGCAGTTTCTTAACGAGT 60.023 41.667 0.00 0.00 39.31 4.18
2283 4738 4.023193 ACCAAATGGCAGTTTCTTAACGAG 60.023 41.667 0.00 0.00 37.80 4.18
2284 4739 3.886505 ACCAAATGGCAGTTTCTTAACGA 59.113 39.130 0.00 0.00 37.80 3.85
2285 4740 4.237349 ACCAAATGGCAGTTTCTTAACG 57.763 40.909 0.00 0.00 37.80 3.18
2286 4741 5.336451 CCCTACCAAATGGCAGTTTCTTAAC 60.336 44.000 0.00 0.00 39.32 2.01
2287 4742 4.770010 CCCTACCAAATGGCAGTTTCTTAA 59.230 41.667 0.00 0.00 39.32 1.85
2288 4743 4.340617 CCCTACCAAATGGCAGTTTCTTA 58.659 43.478 0.00 0.00 39.32 2.10
2289 4744 3.165071 CCCTACCAAATGGCAGTTTCTT 58.835 45.455 0.00 0.00 39.32 2.52
2290 4745 2.557452 CCCCTACCAAATGGCAGTTTCT 60.557 50.000 0.00 0.00 39.32 2.52
2291 4746 1.824852 CCCCTACCAAATGGCAGTTTC 59.175 52.381 0.00 0.00 39.32 2.78
2292 4747 1.552254 CCCCCTACCAAATGGCAGTTT 60.552 52.381 0.00 0.00 39.32 2.66
2293 4748 0.041090 CCCCCTACCAAATGGCAGTT 59.959 55.000 0.00 0.00 39.32 3.16
2294 4749 1.146544 ACCCCCTACCAAATGGCAGT 61.147 55.000 0.00 0.00 39.32 4.40
2295 4750 0.041090 AACCCCCTACCAAATGGCAG 59.959 55.000 0.00 0.00 39.32 4.85
2296 4751 1.006162 GTAACCCCCTACCAAATGGCA 59.994 52.381 0.00 0.00 39.32 4.92
2297 4752 1.286849 AGTAACCCCCTACCAAATGGC 59.713 52.381 0.00 0.00 39.32 4.40
2298 4753 2.578940 TGAGTAACCCCCTACCAAATGG 59.421 50.000 0.00 0.00 42.17 3.16
2299 4754 4.080015 TGATGAGTAACCCCCTACCAAATG 60.080 45.833 0.00 0.00 0.00 2.32
2300 4755 4.079958 GTGATGAGTAACCCCCTACCAAAT 60.080 45.833 0.00 0.00 0.00 2.32
2301 4756 3.264964 GTGATGAGTAACCCCCTACCAAA 59.735 47.826 0.00 0.00 0.00 3.28
2302 4757 2.841881 GTGATGAGTAACCCCCTACCAA 59.158 50.000 0.00 0.00 0.00 3.67
2303 4758 2.474112 GTGATGAGTAACCCCCTACCA 58.526 52.381 0.00 0.00 0.00 3.25
2304 4759 1.767088 GGTGATGAGTAACCCCCTACC 59.233 57.143 0.00 0.00 0.00 3.18
2311 4766 1.411612 CCCTACGGGTGATGAGTAACC 59.588 57.143 0.00 0.00 38.25 2.85
2312 4767 2.361438 CTCCCTACGGGTGATGAGTAAC 59.639 54.545 0.00 0.00 44.74 2.50
2313 4768 2.662866 CTCCCTACGGGTGATGAGTAA 58.337 52.381 0.00 0.00 44.74 2.24
2314 4769 1.753141 GCTCCCTACGGGTGATGAGTA 60.753 57.143 5.24 0.00 44.74 2.59
2315 4770 1.043673 GCTCCCTACGGGTGATGAGT 61.044 60.000 5.24 0.00 44.74 3.41
2316 4771 1.742768 GCTCCCTACGGGTGATGAG 59.257 63.158 5.24 0.00 44.74 2.90
2317 4772 2.125326 CGCTCCCTACGGGTGATGA 61.125 63.158 5.24 0.00 44.74 2.92
2318 4773 1.105167 TACGCTCCCTACGGGTGATG 61.105 60.000 5.24 0.00 44.74 3.07
2319 4774 1.105759 GTACGCTCCCTACGGGTGAT 61.106 60.000 5.24 0.00 44.74 3.06
2320 4775 1.750399 GTACGCTCCCTACGGGTGA 60.750 63.158 5.24 0.00 44.74 4.02
2321 4776 2.803479 GTACGCTCCCTACGGGTG 59.197 66.667 0.00 0.00 44.74 4.61
2322 4777 2.825836 CGTACGCTCCCTACGGGT 60.826 66.667 0.52 0.00 44.74 5.28
2323 4778 1.937546 AAACGTACGCTCCCTACGGG 61.938 60.000 16.72 0.00 46.11 5.28
2324 4779 0.109132 AAAACGTACGCTCCCTACGG 60.109 55.000 16.72 0.00 41.08 4.02
2325 4780 1.262882 GAAAACGTACGCTCCCTACG 58.737 55.000 16.72 1.48 42.22 3.51
2326 4781 2.095059 TCTGAAAACGTACGCTCCCTAC 60.095 50.000 16.72 1.52 0.00 3.18
2327 4782 2.161855 TCTGAAAACGTACGCTCCCTA 58.838 47.619 16.72 0.00 0.00 3.53
2328 4783 0.963962 TCTGAAAACGTACGCTCCCT 59.036 50.000 16.72 0.00 0.00 4.20
2329 4784 1.347320 CTCTGAAAACGTACGCTCCC 58.653 55.000 16.72 3.24 0.00 4.30
2330 4785 0.714439 GCTCTGAAAACGTACGCTCC 59.286 55.000 16.72 2.86 0.00 4.70
2331 4786 0.362512 CGCTCTGAAAACGTACGCTC 59.637 55.000 16.72 10.28 0.00 5.03
2332 4787 1.007336 CCGCTCTGAAAACGTACGCT 61.007 55.000 16.72 0.00 0.00 5.07
2333 4788 1.005294 TCCGCTCTGAAAACGTACGC 61.005 55.000 16.72 0.00 0.00 4.42
2334 4789 0.982673 CTCCGCTCTGAAAACGTACG 59.017 55.000 15.01 15.01 0.00 3.67
2335 4790 1.347320 CCTCCGCTCTGAAAACGTAC 58.653 55.000 0.00 0.00 0.00 3.67
2336 4791 0.389426 GCCTCCGCTCTGAAAACGTA 60.389 55.000 0.00 0.00 0.00 3.57
2337 4792 1.668151 GCCTCCGCTCTGAAAACGT 60.668 57.895 0.00 0.00 0.00 3.99
2338 4793 2.730672 CGCCTCCGCTCTGAAAACG 61.731 63.158 0.00 0.00 0.00 3.60
2339 4794 1.627550 GACGCCTCCGCTCTGAAAAC 61.628 60.000 0.00 0.00 38.22 2.43
2340 4795 1.374252 GACGCCTCCGCTCTGAAAA 60.374 57.895 0.00 0.00 38.22 2.29
2341 4796 2.261671 GACGCCTCCGCTCTGAAA 59.738 61.111 0.00 0.00 38.22 2.69
2342 4797 4.116328 CGACGCCTCCGCTCTGAA 62.116 66.667 0.00 0.00 38.22 3.02
2359 4814 3.414700 CTTGACGCGTCAGTGGGC 61.415 66.667 37.06 13.33 41.13 5.36
2360 4815 2.738521 CCTTGACGCGTCAGTGGG 60.739 66.667 35.45 32.41 41.13 4.61
2361 4816 3.414700 GCCTTGACGCGTCAGTGG 61.415 66.667 37.11 37.11 41.13 4.00
2362 4817 3.414700 GGCCTTGACGCGTCAGTG 61.415 66.667 37.06 31.11 41.13 3.66
2363 4818 3.575351 GAGGCCTTGACGCGTCAGT 62.575 63.158 37.06 22.23 41.99 3.41
2364 4819 2.811317 GAGGCCTTGACGCGTCAG 60.811 66.667 37.06 28.53 41.99 3.51
2365 4820 4.717629 CGAGGCCTTGACGCGTCA 62.718 66.667 36.40 36.40 42.41 4.35
2366 4821 4.415332 TCGAGGCCTTGACGCGTC 62.415 66.667 31.66 31.66 39.65 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.