Multiple sequence alignment - TraesCS3A01G539700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G539700 chr3A 100.000 2849 0 0 1 2849 750739663 750742511 0.000000e+00 5262
1 TraesCS3A01G539700 chr3A 98.612 2305 28 1 264 2564 66010432 66012736 0.000000e+00 4076
2 TraesCS3A01G539700 chr3A 99.301 286 2 0 2561 2846 384679762 384680047 4.210000e-143 518
3 TraesCS3A01G539700 chr3A 99.301 286 2 0 2561 2846 520171059 520171344 4.210000e-143 518
4 TraesCS3A01G539700 chr3A 99.624 266 1 0 1 266 534502548 534502813 1.190000e-133 486
5 TraesCS3A01G539700 chr6A 99.044 2301 22 0 264 2564 84403688 84401388 0.000000e+00 4128
6 TraesCS3A01G539700 chr6A 98.496 266 4 0 1 266 245824460 245824725 1.190000e-128 470
7 TraesCS3A01G539700 chr6A 98.496 266 4 0 1 266 298289502 298289237 1.190000e-128 470
8 TraesCS3A01G539700 chr5D 98.872 2305 21 2 264 2564 503225408 503223105 0.000000e+00 4108
9 TraesCS3A01G539700 chr1B 98.870 2301 25 1 264 2564 619189474 619187175 0.000000e+00 4104
10 TraesCS3A01G539700 chr2B 98.785 2305 24 1 264 2564 449213476 449211172 0.000000e+00 4098
11 TraesCS3A01G539700 chr2B 98.611 2303 24 2 264 2564 234535300 234533004 0.000000e+00 4069
12 TraesCS3A01G539700 chr4B 98.653 2301 31 0 264 2564 209112381 209114681 0.000000e+00 4078
13 TraesCS3A01G539700 chr3B 98.653 2301 31 0 264 2564 6004910 6002610 0.000000e+00 4078
14 TraesCS3A01G539700 chr3B 98.609 2301 32 0 264 2564 92290887 92288587 0.000000e+00 4072
15 TraesCS3A01G539700 chr1A 98.962 289 3 0 2561 2849 82393253 82392965 4.210000e-143 518
16 TraesCS3A01G539700 chr1A 98.951 286 3 0 2561 2846 101835444 101835729 1.960000e-141 512
17 TraesCS3A01G539700 chr1A 98.951 286 3 0 2561 2846 109248416 109248701 1.960000e-141 512
18 TraesCS3A01G539700 chr1A 98.616 289 4 0 2561 2849 117824196 117823908 1.960000e-141 512
19 TraesCS3A01G539700 chr1A 98.616 289 4 0 2561 2849 144576692 144576980 1.960000e-141 512
20 TraesCS3A01G539700 chr1A 98.616 289 4 0 2561 2849 145229977 145229689 1.960000e-141 512
21 TraesCS3A01G539700 chr1A 98.872 266 3 0 1 266 78180500 78180765 2.570000e-130 475
22 TraesCS3A01G539700 chr1A 98.872 266 3 0 1 266 82817884 82818149 2.570000e-130 475
23 TraesCS3A01G539700 chr5A 98.958 288 3 0 2562 2849 677119979 677119692 1.510000e-142 516
24 TraesCS3A01G539700 chr5A 98.872 266 3 0 1 266 483261983 483261718 2.570000e-130 475
25 TraesCS3A01G539700 chr5A 98.872 266 3 0 1 266 651048212 651048477 2.570000e-130 475
26 TraesCS3A01G539700 chr7A 98.872 266 3 0 1 266 223599755 223599490 2.570000e-130 475
27 TraesCS3A01G539700 chr2A 98.872 266 3 0 1 266 423096133 423095868 2.570000e-130 475


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G539700 chr3A 750739663 750742511 2848 False 5262 5262 100.000 1 2849 1 chr3A.!!$F5 2848
1 TraesCS3A01G539700 chr3A 66010432 66012736 2304 False 4076 4076 98.612 264 2564 1 chr3A.!!$F1 2300
2 TraesCS3A01G539700 chr6A 84401388 84403688 2300 True 4128 4128 99.044 264 2564 1 chr6A.!!$R1 2300
3 TraesCS3A01G539700 chr5D 503223105 503225408 2303 True 4108 4108 98.872 264 2564 1 chr5D.!!$R1 2300
4 TraesCS3A01G539700 chr1B 619187175 619189474 2299 True 4104 4104 98.870 264 2564 1 chr1B.!!$R1 2300
5 TraesCS3A01G539700 chr2B 449211172 449213476 2304 True 4098 4098 98.785 264 2564 1 chr2B.!!$R2 2300
6 TraesCS3A01G539700 chr2B 234533004 234535300 2296 True 4069 4069 98.611 264 2564 1 chr2B.!!$R1 2300
7 TraesCS3A01G539700 chr4B 209112381 209114681 2300 False 4078 4078 98.653 264 2564 1 chr4B.!!$F1 2300
8 TraesCS3A01G539700 chr3B 6002610 6004910 2300 True 4078 4078 98.653 264 2564 1 chr3B.!!$R1 2300
9 TraesCS3A01G539700 chr3B 92288587 92290887 2300 True 4072 4072 98.609 264 2564 1 chr3B.!!$R2 2300

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
91 92 0.034186 TCTCAATCCGGGCATTTGCT 60.034 50.0 0.00 0.0 41.7 3.91 F
231 232 0.035317 TTGCTCTGCCAGACGTTCAT 59.965 50.0 0.00 0.0 0.0 2.57 F
247 248 0.107897 TCATAACATCCGGCGTTGCT 60.108 50.0 16.67 0.0 0.0 3.91 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1218 1221 1.417890 CTCCATCGGAACAATAGGGCT 59.582 52.381 0.0 0.0 0.00 5.19 R
1621 1624 5.121298 TCACAATTTCTTGAAGCTCGATCTG 59.879 40.000 0.0 0.0 36.20 2.90 R
2127 2130 6.139679 TCATCTTAGGGTGATCCTTTTGTT 57.860 37.500 0.0 0.0 45.47 2.83 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.895928 TGAGTATATGCTCACTGACAGAAC 58.104 41.667 18.36 0.00 40.23 3.01
24 25 5.654209 TGAGTATATGCTCACTGACAGAACT 59.346 40.000 18.36 0.00 40.23 3.01
25 26 6.828785 TGAGTATATGCTCACTGACAGAACTA 59.171 38.462 18.36 0.00 40.23 2.24
26 27 7.503902 TGAGTATATGCTCACTGACAGAACTAT 59.496 37.037 18.36 0.00 40.23 2.12
27 28 8.243961 AGTATATGCTCACTGACAGAACTATT 57.756 34.615 10.08 0.00 0.00 1.73
28 29 8.356657 AGTATATGCTCACTGACAGAACTATTC 58.643 37.037 10.08 0.00 0.00 1.75
29 30 5.674052 ATGCTCACTGACAGAACTATTCT 57.326 39.130 10.08 0.00 41.70 2.40
30 31 5.065704 TGCTCACTGACAGAACTATTCTC 57.934 43.478 10.08 0.00 38.11 2.87
31 32 4.081972 TGCTCACTGACAGAACTATTCTCC 60.082 45.833 10.08 0.00 38.11 3.71
32 33 4.159506 GCTCACTGACAGAACTATTCTCCT 59.840 45.833 10.08 0.00 38.11 3.69
33 34 5.678616 GCTCACTGACAGAACTATTCTCCTC 60.679 48.000 10.08 0.00 38.11 3.71
34 35 4.707448 TCACTGACAGAACTATTCTCCTCC 59.293 45.833 10.08 0.00 38.11 4.30
35 36 4.464244 CACTGACAGAACTATTCTCCTCCA 59.536 45.833 10.08 0.00 38.11 3.86
36 37 5.128499 CACTGACAGAACTATTCTCCTCCAT 59.872 44.000 10.08 0.00 38.11 3.41
37 38 5.362430 ACTGACAGAACTATTCTCCTCCATC 59.638 44.000 10.08 0.00 38.11 3.51
38 39 5.523588 TGACAGAACTATTCTCCTCCATCT 58.476 41.667 0.00 0.00 38.11 2.90
39 40 5.960811 TGACAGAACTATTCTCCTCCATCTT 59.039 40.000 0.00 0.00 38.11 2.40
40 41 6.127225 TGACAGAACTATTCTCCTCCATCTTG 60.127 42.308 0.00 0.00 38.11 3.02
41 42 5.055812 CAGAACTATTCTCCTCCATCTTGC 58.944 45.833 0.00 0.00 38.11 4.01
42 43 4.718774 AGAACTATTCTCCTCCATCTTGCA 59.281 41.667 0.00 0.00 34.07 4.08
43 44 4.686191 ACTATTCTCCTCCATCTTGCAG 57.314 45.455 0.00 0.00 0.00 4.41
44 45 2.345124 ATTCTCCTCCATCTTGCAGC 57.655 50.000 0.00 0.00 0.00 5.25
45 46 1.283347 TTCTCCTCCATCTTGCAGCT 58.717 50.000 0.00 0.00 0.00 4.24
46 47 2.165357 TCTCCTCCATCTTGCAGCTA 57.835 50.000 0.00 0.00 0.00 3.32
47 48 2.687297 TCTCCTCCATCTTGCAGCTAT 58.313 47.619 0.00 0.00 0.00 2.97
48 49 3.849527 TCTCCTCCATCTTGCAGCTATA 58.150 45.455 0.00 0.00 0.00 1.31
49 50 3.831333 TCTCCTCCATCTTGCAGCTATAG 59.169 47.826 0.00 0.00 0.00 1.31
50 51 3.831333 CTCCTCCATCTTGCAGCTATAGA 59.169 47.826 3.21 0.00 0.00 1.98
51 52 4.226384 TCCTCCATCTTGCAGCTATAGAA 58.774 43.478 3.21 0.00 0.00 2.10
52 53 4.039730 TCCTCCATCTTGCAGCTATAGAAC 59.960 45.833 3.21 0.00 0.00 3.01
53 54 4.040217 CCTCCATCTTGCAGCTATAGAACT 59.960 45.833 3.21 0.00 0.00 3.01
54 55 5.454471 CCTCCATCTTGCAGCTATAGAACTT 60.454 44.000 3.21 0.00 0.00 2.66
55 56 6.239430 CCTCCATCTTGCAGCTATAGAACTTA 60.239 42.308 3.21 0.00 0.00 2.24
56 57 7.308450 TCCATCTTGCAGCTATAGAACTTAT 57.692 36.000 3.21 0.00 0.00 1.73
57 58 8.422577 TCCATCTTGCAGCTATAGAACTTATA 57.577 34.615 3.21 0.00 0.00 0.98
58 59 8.526978 TCCATCTTGCAGCTATAGAACTTATAG 58.473 37.037 3.21 0.00 0.00 1.31
59 60 7.763528 CCATCTTGCAGCTATAGAACTTATAGG 59.236 40.741 3.21 0.00 0.00 2.57
60 61 8.526978 CATCTTGCAGCTATAGAACTTATAGGA 58.473 37.037 3.21 0.00 0.00 2.94
61 62 8.116651 TCTTGCAGCTATAGAACTTATAGGAG 57.883 38.462 3.21 0.00 0.00 3.69
62 63 7.945109 TCTTGCAGCTATAGAACTTATAGGAGA 59.055 37.037 3.21 0.00 0.00 3.71
63 64 7.455641 TGCAGCTATAGAACTTATAGGAGAC 57.544 40.000 3.21 0.00 0.00 3.36
65 66 7.726291 TGCAGCTATAGAACTTATAGGAGACTT 59.274 37.037 3.21 0.00 43.67 3.01
66 67 8.241367 GCAGCTATAGAACTTATAGGAGACTTC 58.759 40.741 3.21 0.00 43.67 3.01
67 68 9.290988 CAGCTATAGAACTTATAGGAGACTTCA 57.709 37.037 3.21 0.00 43.67 3.02
80 81 6.916360 AGGAGACTTCATATCTCTCAATCC 57.084 41.667 2.30 0.00 42.02 3.01
81 82 5.476599 AGGAGACTTCATATCTCTCAATCCG 59.523 44.000 2.30 0.00 42.02 4.18
82 83 5.336372 GGAGACTTCATATCTCTCAATCCGG 60.336 48.000 0.00 0.00 42.02 5.14
83 84 4.526262 AGACTTCATATCTCTCAATCCGGG 59.474 45.833 0.00 0.00 0.00 5.73
84 85 3.007398 ACTTCATATCTCTCAATCCGGGC 59.993 47.826 0.00 0.00 0.00 6.13
85 86 2.608623 TCATATCTCTCAATCCGGGCA 58.391 47.619 0.00 0.00 0.00 5.36
86 87 3.176411 TCATATCTCTCAATCCGGGCAT 58.824 45.455 0.00 0.00 0.00 4.40
87 88 3.584406 TCATATCTCTCAATCCGGGCATT 59.416 43.478 0.00 0.00 0.00 3.56
88 89 4.042062 TCATATCTCTCAATCCGGGCATTT 59.958 41.667 0.00 0.00 0.00 2.32
89 90 2.042686 TCTCTCAATCCGGGCATTTG 57.957 50.000 0.00 1.15 0.00 2.32
90 91 0.383231 CTCTCAATCCGGGCATTTGC 59.617 55.000 0.00 0.00 41.14 3.68
91 92 0.034186 TCTCAATCCGGGCATTTGCT 60.034 50.000 0.00 0.00 41.70 3.91
92 93 0.819582 CTCAATCCGGGCATTTGCTT 59.180 50.000 0.00 0.00 41.70 3.91
93 94 0.531657 TCAATCCGGGCATTTGCTTG 59.468 50.000 0.00 0.00 41.70 4.01
94 95 0.531657 CAATCCGGGCATTTGCTTGA 59.468 50.000 0.00 0.00 41.70 3.02
95 96 1.067000 CAATCCGGGCATTTGCTTGAA 60.067 47.619 0.00 0.00 41.70 2.69
96 97 1.265236 ATCCGGGCATTTGCTTGAAA 58.735 45.000 0.00 0.00 41.70 2.69
97 98 1.265236 TCCGGGCATTTGCTTGAAAT 58.735 45.000 0.00 0.00 41.70 2.17
98 99 2.451490 TCCGGGCATTTGCTTGAAATA 58.549 42.857 0.00 0.00 41.70 1.40
99 100 3.030291 TCCGGGCATTTGCTTGAAATAT 58.970 40.909 0.00 0.00 41.70 1.28
100 101 3.450457 TCCGGGCATTTGCTTGAAATATT 59.550 39.130 0.00 0.00 41.70 1.28
101 102 4.646945 TCCGGGCATTTGCTTGAAATATTA 59.353 37.500 0.00 0.00 41.70 0.98
102 103 5.127845 TCCGGGCATTTGCTTGAAATATTAA 59.872 36.000 0.00 0.00 41.70 1.40
103 104 5.234116 CCGGGCATTTGCTTGAAATATTAAC 59.766 40.000 2.12 0.00 41.70 2.01
104 105 6.042143 CGGGCATTTGCTTGAAATATTAACT 58.958 36.000 2.12 0.00 41.70 2.24
105 106 6.534793 CGGGCATTTGCTTGAAATATTAACTT 59.465 34.615 2.12 0.00 41.70 2.66
106 107 7.254084 CGGGCATTTGCTTGAAATATTAACTTC 60.254 37.037 2.12 0.00 41.70 3.01
107 108 7.548780 GGGCATTTGCTTGAAATATTAACTTCA 59.451 33.333 2.12 0.00 41.70 3.02
108 109 8.934825 GGCATTTGCTTGAAATATTAACTTCAA 58.065 29.630 2.12 8.25 39.20 2.69
109 110 9.745323 GCATTTGCTTGAAATATTAACTTCAAC 57.255 29.630 5.52 4.76 36.79 3.18
112 113 9.691362 TTTGCTTGAAATATTAACTTCAACTCC 57.309 29.630 5.52 0.87 36.79 3.85
113 114 8.635765 TGCTTGAAATATTAACTTCAACTCCT 57.364 30.769 5.52 0.00 36.79 3.69
114 115 8.514594 TGCTTGAAATATTAACTTCAACTCCTG 58.485 33.333 5.52 0.00 36.79 3.86
115 116 8.730680 GCTTGAAATATTAACTTCAACTCCTGA 58.269 33.333 5.52 0.00 36.79 3.86
122 123 9.965902 ATATTAACTTCAACTCCTGAAACATCT 57.034 29.630 0.00 0.00 43.54 2.90
123 124 7.730364 TTAACTTCAACTCCTGAAACATCTC 57.270 36.000 0.00 0.00 43.54 2.75
124 125 5.296151 ACTTCAACTCCTGAAACATCTCA 57.704 39.130 0.00 0.00 43.54 3.27
125 126 5.874093 ACTTCAACTCCTGAAACATCTCAT 58.126 37.500 0.00 0.00 43.54 2.90
126 127 7.009179 ACTTCAACTCCTGAAACATCTCATA 57.991 36.000 0.00 0.00 43.54 2.15
127 128 7.628234 ACTTCAACTCCTGAAACATCTCATAT 58.372 34.615 0.00 0.00 43.54 1.78
128 129 7.551974 ACTTCAACTCCTGAAACATCTCATATG 59.448 37.037 0.00 0.00 43.54 1.78
129 130 5.819379 TCAACTCCTGAAACATCTCATATGC 59.181 40.000 0.00 0.00 0.00 3.14
130 131 5.627182 ACTCCTGAAACATCTCATATGCT 57.373 39.130 0.00 0.00 0.00 3.79
131 132 5.609423 ACTCCTGAAACATCTCATATGCTC 58.391 41.667 0.00 0.00 0.00 4.26
132 133 4.965814 TCCTGAAACATCTCATATGCTCC 58.034 43.478 0.00 0.00 0.00 4.70
133 134 4.409901 TCCTGAAACATCTCATATGCTCCA 59.590 41.667 0.00 0.00 0.00 3.86
134 135 5.072736 TCCTGAAACATCTCATATGCTCCAT 59.927 40.000 0.00 0.00 0.00 3.41
135 136 5.181433 CCTGAAACATCTCATATGCTCCATG 59.819 44.000 0.00 0.28 0.00 3.66
136 137 5.932455 TGAAACATCTCATATGCTCCATGA 58.068 37.500 0.00 0.00 0.00 3.07
137 138 5.761726 TGAAACATCTCATATGCTCCATGAC 59.238 40.000 0.00 0.00 0.00 3.06
138 139 3.922910 ACATCTCATATGCTCCATGACG 58.077 45.455 0.00 0.00 0.00 4.35
139 140 3.323115 ACATCTCATATGCTCCATGACGT 59.677 43.478 0.00 0.00 0.00 4.34
140 141 4.202295 ACATCTCATATGCTCCATGACGTT 60.202 41.667 0.00 0.00 0.00 3.99
141 142 3.982475 TCTCATATGCTCCATGACGTTC 58.018 45.455 0.00 0.00 0.00 3.95
142 143 3.384467 TCTCATATGCTCCATGACGTTCA 59.616 43.478 0.00 0.00 0.00 3.18
143 144 4.122046 CTCATATGCTCCATGACGTTCAA 58.878 43.478 0.00 0.00 0.00 2.69
144 145 4.512484 TCATATGCTCCATGACGTTCAAA 58.488 39.130 0.00 0.00 0.00 2.69
145 146 4.940654 TCATATGCTCCATGACGTTCAAAA 59.059 37.500 0.00 0.00 0.00 2.44
146 147 3.559238 ATGCTCCATGACGTTCAAAAC 57.441 42.857 0.00 0.00 0.00 2.43
159 160 3.348309 GTTCAAAACGTCGTTGAAGTCC 58.652 45.455 21.33 10.85 43.68 3.85
160 161 1.935199 TCAAAACGTCGTTGAAGTCCC 59.065 47.619 12.12 0.00 32.13 4.46
161 162 0.932399 AAAACGTCGTTGAAGTCCCG 59.068 50.000 12.12 0.00 0.00 5.14
162 163 0.102844 AAACGTCGTTGAAGTCCCGA 59.897 50.000 12.12 0.00 0.00 5.14
163 164 0.316204 AACGTCGTTGAAGTCCCGAT 59.684 50.000 10.39 0.00 32.68 4.18
164 165 0.316204 ACGTCGTTGAAGTCCCGATT 59.684 50.000 0.00 0.00 32.68 3.34
165 166 0.989890 CGTCGTTGAAGTCCCGATTC 59.010 55.000 0.00 0.00 32.68 2.52
166 167 1.402456 CGTCGTTGAAGTCCCGATTCT 60.402 52.381 0.00 0.00 32.68 2.40
167 168 2.159476 CGTCGTTGAAGTCCCGATTCTA 60.159 50.000 0.00 0.00 32.68 2.10
168 169 3.671433 CGTCGTTGAAGTCCCGATTCTAA 60.671 47.826 0.00 0.00 32.68 2.10
169 170 3.858238 GTCGTTGAAGTCCCGATTCTAAG 59.142 47.826 0.00 0.00 32.68 2.18
170 171 2.603560 CGTTGAAGTCCCGATTCTAAGC 59.396 50.000 0.00 0.00 0.00 3.09
171 172 2.937149 GTTGAAGTCCCGATTCTAAGCC 59.063 50.000 0.00 0.00 0.00 4.35
172 173 1.136305 TGAAGTCCCGATTCTAAGCCG 59.864 52.381 0.00 0.00 0.00 5.52
173 174 1.136500 GAAGTCCCGATTCTAAGCCGT 59.864 52.381 0.00 0.00 0.00 5.68
174 175 2.062971 AGTCCCGATTCTAAGCCGTA 57.937 50.000 0.00 0.00 0.00 4.02
175 176 2.381911 AGTCCCGATTCTAAGCCGTAA 58.618 47.619 0.00 0.00 0.00 3.18
176 177 2.762327 AGTCCCGATTCTAAGCCGTAAA 59.238 45.455 0.00 0.00 0.00 2.01
177 178 3.121544 GTCCCGATTCTAAGCCGTAAAG 58.878 50.000 0.00 0.00 0.00 1.85
178 179 1.865340 CCCGATTCTAAGCCGTAAAGC 59.135 52.381 0.00 0.00 0.00 3.51
179 180 2.546778 CCGATTCTAAGCCGTAAAGCA 58.453 47.619 0.00 0.00 34.23 3.91
180 181 3.131396 CCGATTCTAAGCCGTAAAGCAT 58.869 45.455 0.00 0.00 34.23 3.79
181 182 3.059597 CCGATTCTAAGCCGTAAAGCATG 60.060 47.826 0.00 0.00 34.23 4.06
182 183 3.059597 CGATTCTAAGCCGTAAAGCATGG 60.060 47.826 0.00 0.00 36.25 3.66
200 201 3.769739 TGGCACACTGAACTATTGAGT 57.230 42.857 0.00 0.00 37.59 3.41
201 202 4.882842 TGGCACACTGAACTATTGAGTA 57.117 40.909 0.00 0.00 33.58 2.59
202 203 4.820897 TGGCACACTGAACTATTGAGTAG 58.179 43.478 0.00 0.00 33.58 2.57
203 204 4.283467 TGGCACACTGAACTATTGAGTAGT 59.717 41.667 0.00 0.00 45.56 2.73
204 205 4.865365 GGCACACTGAACTATTGAGTAGTC 59.135 45.833 0.00 0.00 42.83 2.59
205 206 5.470368 GCACACTGAACTATTGAGTAGTCA 58.530 41.667 0.00 0.00 42.83 3.41
206 207 6.102663 GCACACTGAACTATTGAGTAGTCAT 58.897 40.000 0.00 0.00 42.83 3.06
207 208 6.254589 GCACACTGAACTATTGAGTAGTCATC 59.745 42.308 0.00 0.00 42.83 2.92
208 209 7.315890 CACACTGAACTATTGAGTAGTCATCA 58.684 38.462 0.00 1.07 42.83 3.07
209 210 7.487509 CACACTGAACTATTGAGTAGTCATCAG 59.512 40.741 19.67 19.67 45.47 2.90
210 211 6.475076 CACTGAACTATTGAGTAGTCATCAGC 59.525 42.308 20.62 4.28 44.67 4.26
211 212 6.379703 ACTGAACTATTGAGTAGTCATCAGCT 59.620 38.462 20.62 10.47 44.67 4.24
212 213 7.093552 ACTGAACTATTGAGTAGTCATCAGCTT 60.094 37.037 20.62 6.69 44.67 3.74
213 214 7.615403 TGAACTATTGAGTAGTCATCAGCTTT 58.385 34.615 0.00 0.00 42.83 3.51
214 215 7.547019 TGAACTATTGAGTAGTCATCAGCTTTG 59.453 37.037 0.00 0.00 42.83 2.77
215 216 5.814705 ACTATTGAGTAGTCATCAGCTTTGC 59.185 40.000 0.00 0.00 39.46 3.68
216 217 3.969287 TGAGTAGTCATCAGCTTTGCT 57.031 42.857 0.00 0.00 40.77 3.91
217 218 3.854666 TGAGTAGTCATCAGCTTTGCTC 58.145 45.455 0.00 0.00 36.40 4.26
218 219 3.513119 TGAGTAGTCATCAGCTTTGCTCT 59.487 43.478 0.00 0.00 36.40 4.09
219 220 3.859443 AGTAGTCATCAGCTTTGCTCTG 58.141 45.455 0.00 0.00 36.40 3.35
220 221 1.451067 AGTCATCAGCTTTGCTCTGC 58.549 50.000 0.00 0.00 36.40 4.26
221 222 0.450983 GTCATCAGCTTTGCTCTGCC 59.549 55.000 0.00 0.00 36.40 4.85
222 223 0.037160 TCATCAGCTTTGCTCTGCCA 59.963 50.000 0.00 0.00 36.40 4.92
223 224 0.452184 CATCAGCTTTGCTCTGCCAG 59.548 55.000 0.00 0.00 36.40 4.85
224 225 0.327259 ATCAGCTTTGCTCTGCCAGA 59.673 50.000 0.00 0.00 36.40 3.86
225 226 0.604780 TCAGCTTTGCTCTGCCAGAC 60.605 55.000 0.00 0.00 36.40 3.51
226 227 1.670406 AGCTTTGCTCTGCCAGACG 60.670 57.895 0.00 0.00 30.62 4.18
227 228 1.963338 GCTTTGCTCTGCCAGACGT 60.963 57.895 0.00 0.00 0.00 4.34
228 229 1.510480 GCTTTGCTCTGCCAGACGTT 61.510 55.000 0.00 0.00 0.00 3.99
229 230 0.514691 CTTTGCTCTGCCAGACGTTC 59.485 55.000 0.00 0.00 0.00 3.95
230 231 0.179059 TTTGCTCTGCCAGACGTTCA 60.179 50.000 0.00 0.00 0.00 3.18
231 232 0.035317 TTGCTCTGCCAGACGTTCAT 59.965 50.000 0.00 0.00 0.00 2.57
232 233 0.894835 TGCTCTGCCAGACGTTCATA 59.105 50.000 0.00 0.00 0.00 2.15
233 234 1.275010 TGCTCTGCCAGACGTTCATAA 59.725 47.619 0.00 0.00 0.00 1.90
234 235 1.661112 GCTCTGCCAGACGTTCATAAC 59.339 52.381 0.00 0.00 0.00 1.89
235 236 2.930887 GCTCTGCCAGACGTTCATAACA 60.931 50.000 0.00 0.00 0.00 2.41
236 237 3.525537 CTCTGCCAGACGTTCATAACAT 58.474 45.455 0.00 0.00 0.00 2.71
237 238 3.521560 TCTGCCAGACGTTCATAACATC 58.478 45.455 0.00 0.00 0.00 3.06
238 239 2.609459 CTGCCAGACGTTCATAACATCC 59.391 50.000 0.00 0.00 0.00 3.51
239 240 1.593006 GCCAGACGTTCATAACATCCG 59.407 52.381 0.00 0.00 0.00 4.18
240 241 2.201732 CCAGACGTTCATAACATCCGG 58.798 52.381 0.00 0.00 0.00 5.14
241 242 1.593006 CAGACGTTCATAACATCCGGC 59.407 52.381 0.00 0.00 0.00 6.13
242 243 0.575390 GACGTTCATAACATCCGGCG 59.425 55.000 0.00 0.00 0.00 6.46
243 244 0.108520 ACGTTCATAACATCCGGCGT 60.109 50.000 6.01 0.00 0.00 5.68
244 245 1.003851 CGTTCATAACATCCGGCGTT 58.996 50.000 6.01 12.85 0.00 4.84
245 246 1.267334 CGTTCATAACATCCGGCGTTG 60.267 52.381 16.67 5.79 0.00 4.10
246 247 0.730265 TTCATAACATCCGGCGTTGC 59.270 50.000 16.67 0.00 0.00 4.17
247 248 0.107897 TCATAACATCCGGCGTTGCT 60.108 50.000 16.67 0.00 0.00 3.91
248 249 0.304705 CATAACATCCGGCGTTGCTC 59.695 55.000 16.67 0.00 0.00 4.26
249 250 0.814010 ATAACATCCGGCGTTGCTCC 60.814 55.000 16.67 0.00 0.00 4.70
250 251 2.173758 TAACATCCGGCGTTGCTCCA 62.174 55.000 16.67 0.00 0.00 3.86
251 252 3.197790 CATCCGGCGTTGCTCCAG 61.198 66.667 6.01 0.00 0.00 3.86
524 527 9.449719 TTGAAATAGGATCTAAACAAGGAAGAC 57.550 33.333 0.00 0.00 0.00 3.01
1151 1154 8.961294 ATTCTTCTTCTTCTGATCGATTCAAT 57.039 30.769 0.00 0.00 32.78 2.57
1218 1221 9.834628 GCAACAAGTTTAGTAATAAGCATAACA 57.165 29.630 0.00 0.00 0.00 2.41
1954 1957 2.403252 ATTAAGGTGAAGCAGGGTCG 57.597 50.000 0.00 0.00 0.00 4.79
2574 2581 5.975693 GAATTCTCGATAGACATCCCTCT 57.024 43.478 0.00 0.00 42.67 3.69
2576 2583 7.455641 GAATTCTCGATAGACATCCCTCTAA 57.544 40.000 0.00 0.00 42.67 2.10
2577 2584 8.062065 GAATTCTCGATAGACATCCCTCTAAT 57.938 38.462 0.00 0.00 42.67 1.73
2578 2585 7.639113 ATTCTCGATAGACATCCCTCTAATC 57.361 40.000 0.00 0.00 42.67 1.75
2579 2586 5.502079 TCTCGATAGACATCCCTCTAATCC 58.498 45.833 0.00 0.00 42.67 3.01
2580 2587 5.251932 TCTCGATAGACATCCCTCTAATCCT 59.748 44.000 0.00 0.00 42.67 3.24
2581 2588 5.502079 TCGATAGACATCCCTCTAATCCTC 58.498 45.833 0.00 0.00 42.67 3.71
2582 2589 5.251932 TCGATAGACATCCCTCTAATCCTCT 59.748 44.000 0.00 0.00 42.67 3.69
2583 2590 6.444171 TCGATAGACATCCCTCTAATCCTCTA 59.556 42.308 0.00 0.00 42.67 2.43
2584 2591 7.037514 TCGATAGACATCCCTCTAATCCTCTAA 60.038 40.741 0.00 0.00 42.67 2.10
2585 2592 7.282224 CGATAGACATCCCTCTAATCCTCTAAG 59.718 44.444 0.00 0.00 39.76 2.18
2586 2593 6.288096 AGACATCCCTCTAATCCTCTAAGT 57.712 41.667 0.00 0.00 0.00 2.24
2587 2594 6.074648 AGACATCCCTCTAATCCTCTAAGTG 58.925 44.000 0.00 0.00 0.00 3.16
2588 2595 6.031964 ACATCCCTCTAATCCTCTAAGTGA 57.968 41.667 0.00 0.00 0.00 3.41
2589 2596 6.629156 ACATCCCTCTAATCCTCTAAGTGAT 58.371 40.000 0.00 0.00 0.00 3.06
2590 2597 7.079048 ACATCCCTCTAATCCTCTAAGTGATT 58.921 38.462 0.00 0.00 35.48 2.57
2591 2598 8.235230 ACATCCCTCTAATCCTCTAAGTGATTA 58.765 37.037 0.00 0.00 33.46 1.75
2592 2599 8.527810 CATCCCTCTAATCCTCTAAGTGATTAC 58.472 40.741 0.00 0.00 33.46 1.89
2593 2600 6.715718 TCCCTCTAATCCTCTAAGTGATTACG 59.284 42.308 0.00 0.00 33.46 3.18
2594 2601 6.490721 CCCTCTAATCCTCTAAGTGATTACGT 59.509 42.308 0.00 0.00 33.46 3.57
2595 2602 7.364200 CCTCTAATCCTCTAAGTGATTACGTG 58.636 42.308 0.00 0.00 33.46 4.49
2596 2603 7.228906 CCTCTAATCCTCTAAGTGATTACGTGA 59.771 40.741 0.00 0.00 33.46 4.35
2597 2604 8.693120 TCTAATCCTCTAAGTGATTACGTGAT 57.307 34.615 0.00 0.00 33.46 3.06
2598 2605 8.784994 TCTAATCCTCTAAGTGATTACGTGATC 58.215 37.037 13.08 13.08 33.46 2.92
2599 2606 5.769484 TCCTCTAAGTGATTACGTGATCC 57.231 43.478 16.77 8.83 0.00 3.36
2600 2607 5.198207 TCCTCTAAGTGATTACGTGATCCA 58.802 41.667 16.77 3.55 0.00 3.41
2601 2608 5.655090 TCCTCTAAGTGATTACGTGATCCAA 59.345 40.000 16.77 0.00 0.00 3.53
2602 2609 6.153851 TCCTCTAAGTGATTACGTGATCCAAA 59.846 38.462 16.77 0.00 0.00 3.28
2603 2610 6.986817 CCTCTAAGTGATTACGTGATCCAAAT 59.013 38.462 16.77 0.00 0.00 2.32
2604 2611 7.169982 CCTCTAAGTGATTACGTGATCCAAATC 59.830 40.741 16.77 8.45 0.00 2.17
2605 2612 7.552459 TCTAAGTGATTACGTGATCCAAATCA 58.448 34.615 16.77 10.86 39.63 2.57
2606 2613 8.038351 TCTAAGTGATTACGTGATCCAAATCAA 58.962 33.333 16.77 0.00 43.42 2.57
2607 2614 6.422776 AGTGATTACGTGATCCAAATCAAC 57.577 37.500 16.77 7.13 43.42 3.18
2608 2615 6.173339 AGTGATTACGTGATCCAAATCAACT 58.827 36.000 16.77 9.12 43.42 3.16
2609 2616 7.327975 AGTGATTACGTGATCCAAATCAACTA 58.672 34.615 16.77 0.00 43.42 2.24
2610 2617 7.822334 AGTGATTACGTGATCCAAATCAACTAA 59.178 33.333 16.77 0.00 43.42 2.24
2611 2618 8.447833 GTGATTACGTGATCCAAATCAACTAAA 58.552 33.333 16.77 0.00 43.42 1.85
2612 2619 9.173021 TGATTACGTGATCCAAATCAACTAAAT 57.827 29.630 16.77 0.00 43.42 1.40
2613 2620 9.651718 GATTACGTGATCCAAATCAACTAAATC 57.348 33.333 9.08 0.00 43.42 2.17
2614 2621 8.554835 TTACGTGATCCAAATCAACTAAATCA 57.445 30.769 0.00 0.00 43.42 2.57
2615 2622 7.630242 ACGTGATCCAAATCAACTAAATCAT 57.370 32.000 0.00 0.00 43.42 2.45
2616 2623 7.475015 ACGTGATCCAAATCAACTAAATCATG 58.525 34.615 0.00 0.00 43.42 3.07
2617 2624 7.121168 ACGTGATCCAAATCAACTAAATCATGT 59.879 33.333 0.00 0.00 43.42 3.21
2618 2625 7.641411 CGTGATCCAAATCAACTAAATCATGTC 59.359 37.037 0.00 0.00 43.42 3.06
2619 2626 7.917505 GTGATCCAAATCAACTAAATCATGTCC 59.082 37.037 0.00 0.00 43.42 4.02
2620 2627 6.435430 TCCAAATCAACTAAATCATGTCCG 57.565 37.500 0.00 0.00 0.00 4.79
2621 2628 6.176896 TCCAAATCAACTAAATCATGTCCGA 58.823 36.000 0.00 0.00 0.00 4.55
2622 2629 6.828273 TCCAAATCAACTAAATCATGTCCGAT 59.172 34.615 0.00 0.00 0.00 4.18
2623 2630 7.012327 TCCAAATCAACTAAATCATGTCCGATC 59.988 37.037 0.00 0.00 0.00 3.69
2624 2631 7.201723 CCAAATCAACTAAATCATGTCCGATCA 60.202 37.037 0.00 0.00 0.00 2.92
2625 2632 8.347771 CAAATCAACTAAATCATGTCCGATCAT 58.652 33.333 0.00 0.00 0.00 2.45
2626 2633 7.664082 ATCAACTAAATCATGTCCGATCATC 57.336 36.000 0.00 0.00 0.00 2.92
2627 2634 6.581712 TCAACTAAATCATGTCCGATCATCA 58.418 36.000 0.00 0.00 0.00 3.07
2628 2635 6.479990 TCAACTAAATCATGTCCGATCATCAC 59.520 38.462 0.00 0.00 0.00 3.06
2629 2636 4.984785 ACTAAATCATGTCCGATCATCACG 59.015 41.667 0.00 0.00 0.00 4.35
2630 2637 3.459232 AATCATGTCCGATCATCACGT 57.541 42.857 0.00 0.00 0.00 4.49
2631 2638 2.208326 TCATGTCCGATCATCACGTG 57.792 50.000 9.94 9.94 0.00 4.49
2632 2639 1.748493 TCATGTCCGATCATCACGTGA 59.252 47.619 22.48 22.48 42.06 4.35
2633 2640 2.122564 CATGTCCGATCATCACGTGAG 58.877 52.381 24.41 15.36 40.92 3.51
2634 2641 1.459450 TGTCCGATCATCACGTGAGA 58.541 50.000 24.41 19.81 40.92 3.27
2635 2642 2.024414 TGTCCGATCATCACGTGAGAT 58.976 47.619 24.41 23.15 40.92 2.75
2636 2643 2.223572 TGTCCGATCATCACGTGAGATG 60.224 50.000 24.41 17.82 45.28 2.90
2637 2644 1.338020 TCCGATCATCACGTGAGATGG 59.662 52.381 24.41 22.63 44.30 3.51
2638 2645 1.338020 CCGATCATCACGTGAGATGGA 59.662 52.381 26.12 20.22 44.30 3.41
2639 2646 2.606551 CCGATCATCACGTGAGATGGAG 60.607 54.545 26.12 19.00 44.30 3.86
2640 2647 2.033927 CGATCATCACGTGAGATGGAGT 59.966 50.000 24.41 8.11 44.30 3.85
2641 2648 3.251004 CGATCATCACGTGAGATGGAGTA 59.749 47.826 24.41 2.74 44.30 2.59
2642 2649 4.612486 CGATCATCACGTGAGATGGAGTAG 60.612 50.000 24.41 9.72 44.30 2.57
2643 2650 3.621558 TCATCACGTGAGATGGAGTAGT 58.378 45.455 24.41 0.00 44.30 2.73
2644 2651 4.017126 TCATCACGTGAGATGGAGTAGTT 58.983 43.478 24.41 0.00 44.30 2.24
2645 2652 4.462834 TCATCACGTGAGATGGAGTAGTTT 59.537 41.667 24.41 0.00 44.30 2.66
2646 2653 4.436242 TCACGTGAGATGGAGTAGTTTC 57.564 45.455 15.76 0.00 0.00 2.78
2647 2654 3.824443 TCACGTGAGATGGAGTAGTTTCA 59.176 43.478 15.76 0.00 0.00 2.69
2648 2655 4.462834 TCACGTGAGATGGAGTAGTTTCAT 59.537 41.667 15.76 0.00 0.00 2.57
2649 2656 5.047306 TCACGTGAGATGGAGTAGTTTCATT 60.047 40.000 15.76 0.00 0.00 2.57
2650 2657 5.062683 CACGTGAGATGGAGTAGTTTCATTG 59.937 44.000 10.90 0.00 0.00 2.82
2651 2658 4.568359 CGTGAGATGGAGTAGTTTCATTGG 59.432 45.833 0.00 0.00 0.00 3.16
2652 2659 5.491982 GTGAGATGGAGTAGTTTCATTGGT 58.508 41.667 0.00 0.00 0.00 3.67
2653 2660 5.352569 GTGAGATGGAGTAGTTTCATTGGTG 59.647 44.000 0.00 0.00 0.00 4.17
2654 2661 5.248248 TGAGATGGAGTAGTTTCATTGGTGA 59.752 40.000 0.00 0.00 0.00 4.02
2655 2662 6.126863 AGATGGAGTAGTTTCATTGGTGAA 57.873 37.500 0.00 0.00 42.41 3.18
2656 2663 5.940470 AGATGGAGTAGTTTCATTGGTGAAC 59.060 40.000 0.00 0.00 43.72 3.18
2657 2664 5.042463 TGGAGTAGTTTCATTGGTGAACA 57.958 39.130 0.00 0.00 43.72 3.18
2658 2665 5.630121 TGGAGTAGTTTCATTGGTGAACAT 58.370 37.500 0.00 0.00 43.72 2.71
2659 2666 5.705441 TGGAGTAGTTTCATTGGTGAACATC 59.295 40.000 0.00 0.00 43.72 3.06
2660 2667 5.705441 GGAGTAGTTTCATTGGTGAACATCA 59.295 40.000 0.00 0.00 43.72 3.07
2661 2668 6.348540 GGAGTAGTTTCATTGGTGAACATCAC 60.349 42.308 1.88 1.88 43.72 3.06
2662 2669 6.299141 AGTAGTTTCATTGGTGAACATCACT 58.701 36.000 10.06 0.00 46.19 3.41
2663 2670 7.450074 AGTAGTTTCATTGGTGAACATCACTA 58.550 34.615 10.06 1.54 46.19 2.74
2664 2671 8.103305 AGTAGTTTCATTGGTGAACATCACTAT 58.897 33.333 10.06 2.57 46.19 2.12
2665 2672 7.149569 AGTTTCATTGGTGAACATCACTATG 57.850 36.000 10.06 12.67 46.19 2.23
2696 2703 8.552034 TCATATCTACTATATGATTCACGCTCG 58.448 37.037 4.05 0.00 36.43 5.03
2697 2704 6.986904 ATCTACTATATGATTCACGCTCGA 57.013 37.500 0.00 0.00 0.00 4.04
2698 2705 6.166911 TCTACTATATGATTCACGCTCGAC 57.833 41.667 0.00 0.00 0.00 4.20
2699 2706 4.162096 ACTATATGATTCACGCTCGACC 57.838 45.455 0.00 0.00 0.00 4.79
2700 2707 3.821600 ACTATATGATTCACGCTCGACCT 59.178 43.478 0.00 0.00 0.00 3.85
2701 2708 3.735237 ATATGATTCACGCTCGACCTT 57.265 42.857 0.00 0.00 0.00 3.50
2702 2709 2.386661 ATGATTCACGCTCGACCTTT 57.613 45.000 0.00 0.00 0.00 3.11
2703 2710 2.163818 TGATTCACGCTCGACCTTTT 57.836 45.000 0.00 0.00 0.00 2.27
2704 2711 1.798223 TGATTCACGCTCGACCTTTTG 59.202 47.619 0.00 0.00 0.00 2.44
2717 2724 1.235724 CCTTTTGGTCTCCGTGTTCC 58.764 55.000 0.00 0.00 34.07 3.62
2718 2725 0.865769 CTTTTGGTCTCCGTGTTCCG 59.134 55.000 0.00 0.00 0.00 4.30
2719 2726 0.464870 TTTTGGTCTCCGTGTTCCGA 59.535 50.000 0.00 0.00 39.56 4.55
2720 2727 0.032952 TTTGGTCTCCGTGTTCCGAG 59.967 55.000 0.00 0.00 39.56 4.63
2721 2728 1.812686 TTGGTCTCCGTGTTCCGAGG 61.813 60.000 0.00 0.00 39.56 4.63
2722 2729 2.126031 GTCTCCGTGTTCCGAGGC 60.126 66.667 0.00 0.00 39.56 4.70
2723 2730 3.379445 TCTCCGTGTTCCGAGGCC 61.379 66.667 0.00 0.00 39.56 5.19
2724 2731 3.691342 CTCCGTGTTCCGAGGCCA 61.691 66.667 5.01 0.00 39.56 5.36
2725 2732 3.000819 TCCGTGTTCCGAGGCCAT 61.001 61.111 5.01 0.00 39.56 4.40
2726 2733 1.672854 CTCCGTGTTCCGAGGCCATA 61.673 60.000 5.01 0.00 39.56 2.74
2727 2734 1.046472 TCCGTGTTCCGAGGCCATAT 61.046 55.000 5.01 0.00 39.56 1.78
2728 2735 0.600255 CCGTGTTCCGAGGCCATATC 60.600 60.000 5.01 0.00 39.56 1.63
2729 2736 0.389391 CGTGTTCCGAGGCCATATCT 59.611 55.000 5.01 0.00 39.56 1.98
2730 2737 1.869754 CGTGTTCCGAGGCCATATCTG 60.870 57.143 5.01 0.00 39.56 2.90
2731 2738 1.139058 GTGTTCCGAGGCCATATCTGT 59.861 52.381 5.01 0.00 0.00 3.41
2732 2739 2.364324 GTGTTCCGAGGCCATATCTGTA 59.636 50.000 5.01 0.00 0.00 2.74
2733 2740 3.006967 GTGTTCCGAGGCCATATCTGTAT 59.993 47.826 5.01 0.00 0.00 2.29
2734 2741 4.219944 GTGTTCCGAGGCCATATCTGTATA 59.780 45.833 5.01 0.00 0.00 1.47
2735 2742 5.023452 TGTTCCGAGGCCATATCTGTATAT 58.977 41.667 5.01 0.00 0.00 0.86
2736 2743 5.105351 TGTTCCGAGGCCATATCTGTATATG 60.105 44.000 5.01 0.00 43.15 1.78
2737 2744 3.384789 TCCGAGGCCATATCTGTATATGC 59.615 47.826 5.01 0.00 42.48 3.14
2738 2745 3.386078 CCGAGGCCATATCTGTATATGCT 59.614 47.826 5.01 0.00 42.48 3.79
2739 2746 4.141846 CCGAGGCCATATCTGTATATGCTT 60.142 45.833 5.01 0.00 42.48 3.91
2740 2747 4.807834 CGAGGCCATATCTGTATATGCTTG 59.192 45.833 5.01 0.00 42.48 4.01
2741 2748 5.108187 AGGCCATATCTGTATATGCTTGG 57.892 43.478 5.01 0.00 42.48 3.61
2742 2749 3.629398 GGCCATATCTGTATATGCTTGGC 59.371 47.826 0.00 2.06 42.48 4.52
2743 2750 4.521146 GCCATATCTGTATATGCTTGGCT 58.479 43.478 3.47 0.00 42.48 4.75
2744 2751 4.574013 GCCATATCTGTATATGCTTGGCTC 59.426 45.833 3.47 0.00 42.48 4.70
2745 2752 4.807834 CCATATCTGTATATGCTTGGCTCG 59.192 45.833 0.00 0.00 42.48 5.03
2746 2753 5.414360 CATATCTGTATATGCTTGGCTCGT 58.586 41.667 0.00 0.00 38.81 4.18
2747 2754 3.371102 TCTGTATATGCTTGGCTCGTC 57.629 47.619 0.00 0.00 0.00 4.20
2748 2755 2.693074 TCTGTATATGCTTGGCTCGTCA 59.307 45.455 0.00 0.00 0.00 4.35
2749 2756 3.132111 TCTGTATATGCTTGGCTCGTCAA 59.868 43.478 0.00 0.00 0.00 3.18
2750 2757 3.457234 TGTATATGCTTGGCTCGTCAAG 58.543 45.455 6.89 6.89 44.97 3.02
2751 2758 2.698855 ATATGCTTGGCTCGTCAAGT 57.301 45.000 12.30 0.00 44.26 3.16
2752 2759 2.472695 TATGCTTGGCTCGTCAAGTT 57.527 45.000 12.30 4.17 44.26 2.66
2753 2760 1.609208 ATGCTTGGCTCGTCAAGTTT 58.391 45.000 12.30 0.00 44.26 2.66
2754 2761 2.248280 TGCTTGGCTCGTCAAGTTTA 57.752 45.000 12.30 0.00 44.26 2.01
2755 2762 2.566913 TGCTTGGCTCGTCAAGTTTAA 58.433 42.857 12.30 0.00 44.26 1.52
2756 2763 2.289547 TGCTTGGCTCGTCAAGTTTAAC 59.710 45.455 12.30 0.00 44.26 2.01
2757 2764 2.350484 GCTTGGCTCGTCAAGTTTAACC 60.350 50.000 12.30 0.00 44.26 2.85
2758 2765 2.922740 TGGCTCGTCAAGTTTAACCT 57.077 45.000 0.00 0.00 0.00 3.50
2759 2766 2.489971 TGGCTCGTCAAGTTTAACCTG 58.510 47.619 0.00 0.00 0.00 4.00
2760 2767 2.103432 TGGCTCGTCAAGTTTAACCTGA 59.897 45.455 0.00 0.00 0.00 3.86
2761 2768 2.737252 GGCTCGTCAAGTTTAACCTGAG 59.263 50.000 0.00 0.00 0.00 3.35
2762 2769 3.391049 GCTCGTCAAGTTTAACCTGAGT 58.609 45.455 0.00 0.00 0.00 3.41
2763 2770 4.553323 GCTCGTCAAGTTTAACCTGAGTA 58.447 43.478 0.00 0.00 0.00 2.59
2764 2771 5.169295 GCTCGTCAAGTTTAACCTGAGTAT 58.831 41.667 0.00 0.00 0.00 2.12
2765 2772 5.638234 GCTCGTCAAGTTTAACCTGAGTATT 59.362 40.000 0.00 0.00 0.00 1.89
2766 2773 6.183360 GCTCGTCAAGTTTAACCTGAGTATTC 60.183 42.308 0.00 0.00 0.00 1.75
2767 2774 6.161381 TCGTCAAGTTTAACCTGAGTATTCC 58.839 40.000 0.00 0.00 0.00 3.01
2768 2775 5.061808 CGTCAAGTTTAACCTGAGTATTCCG 59.938 44.000 0.00 0.00 0.00 4.30
2769 2776 4.933400 TCAAGTTTAACCTGAGTATTCCGC 59.067 41.667 0.00 0.00 0.00 5.54
2770 2777 3.518590 AGTTTAACCTGAGTATTCCGCG 58.481 45.455 0.00 0.00 0.00 6.46
2771 2778 3.056322 AGTTTAACCTGAGTATTCCGCGT 60.056 43.478 4.92 0.00 0.00 6.01
2772 2779 2.572191 TAACCTGAGTATTCCGCGTG 57.428 50.000 4.92 0.00 0.00 5.34
2773 2780 0.606604 AACCTGAGTATTCCGCGTGT 59.393 50.000 4.92 0.00 0.00 4.49
2774 2781 0.108804 ACCTGAGTATTCCGCGTGTG 60.109 55.000 4.92 0.00 0.00 3.82
2775 2782 1.421410 CCTGAGTATTCCGCGTGTGC 61.421 60.000 4.92 0.00 37.91 4.57
2776 2783 0.735978 CTGAGTATTCCGCGTGTGCA 60.736 55.000 4.92 0.00 42.97 4.57
2777 2784 0.319986 TGAGTATTCCGCGTGTGCAA 60.320 50.000 4.92 0.00 42.97 4.08
2778 2785 0.094730 GAGTATTCCGCGTGTGCAAC 59.905 55.000 4.92 0.00 42.97 4.17
2779 2786 0.320421 AGTATTCCGCGTGTGCAACT 60.320 50.000 4.92 0.00 42.97 3.16
2780 2787 0.179225 GTATTCCGCGTGTGCAACTG 60.179 55.000 4.92 0.00 42.97 3.16
2781 2788 0.601576 TATTCCGCGTGTGCAACTGT 60.602 50.000 4.92 0.00 42.97 3.55
2782 2789 1.444119 ATTCCGCGTGTGCAACTGTT 61.444 50.000 4.92 0.00 42.97 3.16
2783 2790 1.649390 TTCCGCGTGTGCAACTGTTT 61.649 50.000 4.92 0.00 42.97 2.83
2784 2791 1.226547 CCGCGTGTGCAACTGTTTT 60.227 52.632 4.92 0.00 42.97 2.43
2785 2792 1.470699 CCGCGTGTGCAACTGTTTTG 61.471 55.000 4.92 0.00 42.97 2.44
2786 2793 1.630549 GCGTGTGCAACTGTTTTGC 59.369 52.632 1.95 1.95 45.11 3.68
2791 2798 4.011046 GCAACTGTTTTGCACCCG 57.989 55.556 4.12 0.00 44.34 5.28
2792 2799 1.140804 GCAACTGTTTTGCACCCGT 59.859 52.632 4.12 0.00 44.34 5.28
2793 2800 0.459411 GCAACTGTTTTGCACCCGTT 60.459 50.000 4.12 0.00 44.34 4.44
2794 2801 1.276415 CAACTGTTTTGCACCCGTTG 58.724 50.000 0.00 0.00 32.64 4.10
2795 2802 0.892063 AACTGTTTTGCACCCGTTGT 59.108 45.000 0.00 0.00 0.00 3.32
2796 2803 1.752683 ACTGTTTTGCACCCGTTGTA 58.247 45.000 0.00 0.00 0.00 2.41
2797 2804 2.303175 ACTGTTTTGCACCCGTTGTAT 58.697 42.857 0.00 0.00 0.00 2.29
2798 2805 2.691011 ACTGTTTTGCACCCGTTGTATT 59.309 40.909 0.00 0.00 0.00 1.89
2799 2806 3.131400 ACTGTTTTGCACCCGTTGTATTT 59.869 39.130 0.00 0.00 0.00 1.40
2800 2807 3.448686 TGTTTTGCACCCGTTGTATTTG 58.551 40.909 0.00 0.00 0.00 2.32
2801 2808 3.130516 TGTTTTGCACCCGTTGTATTTGA 59.869 39.130 0.00 0.00 0.00 2.69
2802 2809 4.113354 GTTTTGCACCCGTTGTATTTGAA 58.887 39.130 0.00 0.00 0.00 2.69
2803 2810 3.357166 TTGCACCCGTTGTATTTGAAC 57.643 42.857 0.00 0.00 0.00 3.18
2804 2811 1.264557 TGCACCCGTTGTATTTGAACG 59.735 47.619 0.00 0.00 44.59 3.95
2805 2812 1.264826 GCACCCGTTGTATTTGAACGT 59.735 47.619 0.00 0.00 43.70 3.99
2806 2813 2.479656 GCACCCGTTGTATTTGAACGTA 59.520 45.455 0.00 0.00 43.70 3.57
2807 2814 3.423907 GCACCCGTTGTATTTGAACGTAG 60.424 47.826 0.00 0.00 43.70 3.51
2808 2815 3.989167 CACCCGTTGTATTTGAACGTAGA 59.011 43.478 0.00 0.00 43.70 2.59
2809 2816 4.090930 CACCCGTTGTATTTGAACGTAGAG 59.909 45.833 0.00 0.00 43.70 2.43
2810 2817 3.061697 CCCGTTGTATTTGAACGTAGAGC 59.938 47.826 0.00 0.00 43.70 4.09
2811 2818 3.061697 CCGTTGTATTTGAACGTAGAGCC 59.938 47.826 0.00 0.00 43.70 4.70
2812 2819 3.924686 CGTTGTATTTGAACGTAGAGCCT 59.075 43.478 0.00 0.00 41.00 4.58
2813 2820 5.097529 CGTTGTATTTGAACGTAGAGCCTA 58.902 41.667 0.00 0.00 41.00 3.93
2814 2821 5.747197 CGTTGTATTTGAACGTAGAGCCTAT 59.253 40.000 0.00 0.00 41.00 2.57
2815 2822 6.074994 CGTTGTATTTGAACGTAGAGCCTATC 60.075 42.308 0.00 0.00 41.00 2.08
2816 2823 6.459670 TGTATTTGAACGTAGAGCCTATCA 57.540 37.500 0.00 0.00 0.00 2.15
2817 2824 6.270815 TGTATTTGAACGTAGAGCCTATCAC 58.729 40.000 0.00 0.00 0.00 3.06
2818 2825 4.794278 TTTGAACGTAGAGCCTATCACA 57.206 40.909 0.00 0.00 0.00 3.58
2819 2826 3.777465 TGAACGTAGAGCCTATCACAC 57.223 47.619 0.00 0.00 0.00 3.82
2820 2827 2.426024 TGAACGTAGAGCCTATCACACC 59.574 50.000 0.00 0.00 0.00 4.16
2821 2828 1.400737 ACGTAGAGCCTATCACACCC 58.599 55.000 0.00 0.00 0.00 4.61
2822 2829 0.311165 CGTAGAGCCTATCACACCCG 59.689 60.000 0.00 0.00 0.00 5.28
2823 2830 1.688772 GTAGAGCCTATCACACCCGA 58.311 55.000 0.00 0.00 0.00 5.14
2824 2831 2.240279 GTAGAGCCTATCACACCCGAT 58.760 52.381 0.00 0.00 0.00 4.18
2825 2832 1.333177 AGAGCCTATCACACCCGATC 58.667 55.000 0.00 0.00 0.00 3.69
2826 2833 1.040646 GAGCCTATCACACCCGATCA 58.959 55.000 0.00 0.00 0.00 2.92
2827 2834 1.620819 GAGCCTATCACACCCGATCAT 59.379 52.381 0.00 0.00 0.00 2.45
2828 2835 1.620819 AGCCTATCACACCCGATCATC 59.379 52.381 0.00 0.00 0.00 2.92
2829 2836 1.344438 GCCTATCACACCCGATCATCA 59.656 52.381 0.00 0.00 0.00 3.07
2830 2837 2.868044 GCCTATCACACCCGATCATCAC 60.868 54.545 0.00 0.00 0.00 3.06
2831 2838 2.608016 CCTATCACACCCGATCATCACG 60.608 54.545 0.00 0.00 0.00 4.35
2832 2839 0.824109 ATCACACCCGATCATCACGT 59.176 50.000 0.00 0.00 0.00 4.49
2833 2840 0.108851 TCACACCCGATCATCACGTG 60.109 55.000 9.94 9.94 0.00 4.49
2834 2841 1.083806 CACACCCGATCATCACGTGG 61.084 60.000 17.00 0.00 0.00 4.94
2835 2842 1.218047 CACCCGATCATCACGTGGT 59.782 57.895 17.00 5.26 35.78 4.16
2836 2843 1.083806 CACCCGATCATCACGTGGTG 61.084 60.000 23.01 23.01 41.46 4.17
2837 2844 1.218047 CCCGATCATCACGTGGTGT 59.782 57.895 27.10 15.24 34.79 4.16
2838 2845 0.806102 CCCGATCATCACGTGGTGTC 60.806 60.000 27.10 21.03 34.79 3.67
2839 2846 0.173481 CCGATCATCACGTGGTGTCT 59.827 55.000 27.10 16.35 34.79 3.41
2840 2847 1.550065 CGATCATCACGTGGTGTCTC 58.450 55.000 27.10 21.93 34.79 3.36
2841 2848 1.135402 CGATCATCACGTGGTGTCTCA 60.135 52.381 27.10 9.55 34.79 3.27
2842 2849 2.534298 GATCATCACGTGGTGTCTCAG 58.466 52.381 27.10 1.70 34.79 3.35
2843 2850 0.038251 TCATCACGTGGTGTCTCAGC 60.038 55.000 27.10 0.00 34.79 4.26
2844 2851 0.319813 CATCACGTGGTGTCTCAGCA 60.320 55.000 20.85 0.00 39.63 4.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.654209 AGTTCTGTCAGTGAGCATATACTCA 59.346 40.000 1.20 1.20 44.32 3.41
1 2 6.142818 AGTTCTGTCAGTGAGCATATACTC 57.857 41.667 0.00 0.00 37.19 2.59
2 3 7.831691 ATAGTTCTGTCAGTGAGCATATACT 57.168 36.000 0.00 2.46 0.00 2.12
3 4 8.356657 AGAATAGTTCTGTCAGTGAGCATATAC 58.643 37.037 0.00 0.00 38.91 1.47
4 5 8.470657 AGAATAGTTCTGTCAGTGAGCATATA 57.529 34.615 0.00 0.00 38.91 0.86
5 6 7.358770 AGAATAGTTCTGTCAGTGAGCATAT 57.641 36.000 0.00 0.00 38.91 1.78
6 7 6.183360 GGAGAATAGTTCTGTCAGTGAGCATA 60.183 42.308 0.00 0.00 40.87 3.14
7 8 5.395103 GGAGAATAGTTCTGTCAGTGAGCAT 60.395 44.000 0.00 0.00 40.87 3.79
8 9 4.081972 GGAGAATAGTTCTGTCAGTGAGCA 60.082 45.833 0.00 0.00 40.87 4.26
9 10 4.159506 AGGAGAATAGTTCTGTCAGTGAGC 59.840 45.833 0.00 0.00 40.87 4.26
10 11 5.163561 GGAGGAGAATAGTTCTGTCAGTGAG 60.164 48.000 0.00 0.00 40.87 3.51
11 12 4.707448 GGAGGAGAATAGTTCTGTCAGTGA 59.293 45.833 0.00 0.00 40.87 3.41
12 13 4.464244 TGGAGGAGAATAGTTCTGTCAGTG 59.536 45.833 0.00 0.00 40.87 3.66
13 14 4.678256 TGGAGGAGAATAGTTCTGTCAGT 58.322 43.478 0.00 0.00 40.87 3.41
14 15 5.598005 AGATGGAGGAGAATAGTTCTGTCAG 59.402 44.000 0.00 0.00 40.87 3.51
15 16 5.523588 AGATGGAGGAGAATAGTTCTGTCA 58.476 41.667 0.00 0.00 40.87 3.58
16 17 6.279882 CAAGATGGAGGAGAATAGTTCTGTC 58.720 44.000 0.00 0.00 40.87 3.51
17 18 5.396213 GCAAGATGGAGGAGAATAGTTCTGT 60.396 44.000 0.00 0.00 40.87 3.41
18 19 5.055812 GCAAGATGGAGGAGAATAGTTCTG 58.944 45.833 0.00 0.00 40.87 3.02
19 20 4.718774 TGCAAGATGGAGGAGAATAGTTCT 59.281 41.667 0.00 0.00 44.21 3.01
20 21 5.028549 TGCAAGATGGAGGAGAATAGTTC 57.971 43.478 0.00 0.00 0.00 3.01
21 22 4.685575 GCTGCAAGATGGAGGAGAATAGTT 60.686 45.833 0.00 0.00 36.25 2.24
22 23 3.181456 GCTGCAAGATGGAGGAGAATAGT 60.181 47.826 0.00 0.00 36.25 2.12
23 24 3.071312 AGCTGCAAGATGGAGGAGAATAG 59.929 47.826 1.02 0.00 36.25 1.73
24 25 3.044156 AGCTGCAAGATGGAGGAGAATA 58.956 45.455 1.02 0.00 36.25 1.75
25 26 1.845143 AGCTGCAAGATGGAGGAGAAT 59.155 47.619 1.02 0.00 36.25 2.40
26 27 1.283347 AGCTGCAAGATGGAGGAGAA 58.717 50.000 1.02 0.00 36.25 2.87
27 28 2.165357 TAGCTGCAAGATGGAGGAGA 57.835 50.000 1.02 0.00 36.25 3.71
28 29 3.831333 TCTATAGCTGCAAGATGGAGGAG 59.169 47.826 1.02 0.00 36.25 3.69
29 30 3.849527 TCTATAGCTGCAAGATGGAGGA 58.150 45.455 1.02 0.00 36.25 3.71
30 31 4.040217 AGTTCTATAGCTGCAAGATGGAGG 59.960 45.833 1.02 0.00 36.25 4.30
31 32 5.212532 AGTTCTATAGCTGCAAGATGGAG 57.787 43.478 1.02 0.00 38.97 3.86
32 33 5.620738 AAGTTCTATAGCTGCAAGATGGA 57.379 39.130 1.02 0.00 34.07 3.41
33 34 7.763528 CCTATAAGTTCTATAGCTGCAAGATGG 59.236 40.741 1.02 0.00 34.07 3.51
34 35 8.526978 TCCTATAAGTTCTATAGCTGCAAGATG 58.473 37.037 1.02 0.00 34.07 2.90
35 36 8.657387 TCCTATAAGTTCTATAGCTGCAAGAT 57.343 34.615 1.02 0.00 34.07 2.40
36 37 7.945109 TCTCCTATAAGTTCTATAGCTGCAAGA 59.055 37.037 1.02 0.00 34.07 3.02
37 38 8.026607 GTCTCCTATAAGTTCTATAGCTGCAAG 58.973 40.741 1.02 0.00 0.00 4.01
38 39 7.726291 AGTCTCCTATAAGTTCTATAGCTGCAA 59.274 37.037 1.02 0.00 0.00 4.08
39 40 7.235079 AGTCTCCTATAAGTTCTATAGCTGCA 58.765 38.462 1.02 0.00 0.00 4.41
40 41 7.696992 AGTCTCCTATAAGTTCTATAGCTGC 57.303 40.000 0.00 0.00 0.00 5.25
41 42 9.290988 TGAAGTCTCCTATAAGTTCTATAGCTG 57.709 37.037 0.00 0.00 0.00 4.24
54 55 9.693739 GGATTGAGAGATATGAAGTCTCCTATA 57.306 37.037 0.00 0.00 42.41 1.31
55 56 7.339212 CGGATTGAGAGATATGAAGTCTCCTAT 59.661 40.741 0.00 0.00 42.41 2.57
56 57 6.657117 CGGATTGAGAGATATGAAGTCTCCTA 59.343 42.308 0.00 0.00 42.41 2.94
57 58 5.476599 CGGATTGAGAGATATGAAGTCTCCT 59.523 44.000 0.00 0.00 42.41 3.69
58 59 5.336372 CCGGATTGAGAGATATGAAGTCTCC 60.336 48.000 0.00 0.00 42.41 3.71
59 60 5.336372 CCCGGATTGAGAGATATGAAGTCTC 60.336 48.000 0.73 0.00 41.89 3.36
60 61 4.526262 CCCGGATTGAGAGATATGAAGTCT 59.474 45.833 0.73 0.00 0.00 3.24
61 62 4.815269 CCCGGATTGAGAGATATGAAGTC 58.185 47.826 0.73 0.00 0.00 3.01
62 63 3.007398 GCCCGGATTGAGAGATATGAAGT 59.993 47.826 0.73 0.00 0.00 3.01
63 64 3.007290 TGCCCGGATTGAGAGATATGAAG 59.993 47.826 0.73 0.00 0.00 3.02
64 65 2.972021 TGCCCGGATTGAGAGATATGAA 59.028 45.455 0.73 0.00 0.00 2.57
65 66 2.608623 TGCCCGGATTGAGAGATATGA 58.391 47.619 0.73 0.00 0.00 2.15
66 67 3.623906 ATGCCCGGATTGAGAGATATG 57.376 47.619 0.73 0.00 0.00 1.78
67 68 4.330250 CAAATGCCCGGATTGAGAGATAT 58.670 43.478 0.73 0.00 0.00 1.63
68 69 3.743521 CAAATGCCCGGATTGAGAGATA 58.256 45.455 0.73 0.00 0.00 1.98
69 70 2.579873 CAAATGCCCGGATTGAGAGAT 58.420 47.619 0.73 0.00 0.00 2.75
70 71 2.018644 GCAAATGCCCGGATTGAGAGA 61.019 52.381 0.73 0.00 34.31 3.10
71 72 0.383231 GCAAATGCCCGGATTGAGAG 59.617 55.000 0.73 0.00 34.31 3.20
72 73 0.034186 AGCAAATGCCCGGATTGAGA 60.034 50.000 0.73 0.00 43.38 3.27
73 74 0.819582 AAGCAAATGCCCGGATTGAG 59.180 50.000 0.73 0.00 43.38 3.02
74 75 0.531657 CAAGCAAATGCCCGGATTGA 59.468 50.000 0.73 0.00 43.38 2.57
75 76 0.531657 TCAAGCAAATGCCCGGATTG 59.468 50.000 0.73 3.83 43.38 2.67
76 77 1.265236 TTCAAGCAAATGCCCGGATT 58.735 45.000 0.73 0.00 43.38 3.01
77 78 1.265236 TTTCAAGCAAATGCCCGGAT 58.735 45.000 0.73 0.00 43.38 4.18
78 79 1.265236 ATTTCAAGCAAATGCCCGGA 58.735 45.000 0.73 0.00 43.38 5.14
79 80 2.957491 TATTTCAAGCAAATGCCCGG 57.043 45.000 0.94 0.00 43.38 5.73
80 81 6.042143 AGTTAATATTTCAAGCAAATGCCCG 58.958 36.000 0.94 0.00 43.38 6.13
81 82 7.548780 TGAAGTTAATATTTCAAGCAAATGCCC 59.451 33.333 0.94 0.00 43.38 5.36
82 83 8.477984 TGAAGTTAATATTTCAAGCAAATGCC 57.522 30.769 0.94 0.00 43.38 4.40
83 84 9.745323 GTTGAAGTTAATATTTCAAGCAAATGC 57.255 29.630 10.94 0.00 42.19 3.56
86 87 9.691362 GGAGTTGAAGTTAATATTTCAAGCAAA 57.309 29.630 10.94 0.00 42.19 3.68
87 88 9.077885 AGGAGTTGAAGTTAATATTTCAAGCAA 57.922 29.630 10.94 0.00 42.19 3.91
88 89 8.514594 CAGGAGTTGAAGTTAATATTTCAAGCA 58.485 33.333 10.94 0.00 42.19 3.91
89 90 8.730680 TCAGGAGTTGAAGTTAATATTTCAAGC 58.269 33.333 10.94 7.85 42.19 4.01
96 97 9.965902 AGATGTTTCAGGAGTTGAAGTTAATAT 57.034 29.630 0.00 0.00 46.01 1.28
97 98 9.436957 GAGATGTTTCAGGAGTTGAAGTTAATA 57.563 33.333 0.00 0.00 46.01 0.98
98 99 7.939039 TGAGATGTTTCAGGAGTTGAAGTTAAT 59.061 33.333 0.00 0.00 46.01 1.40
99 100 7.279615 TGAGATGTTTCAGGAGTTGAAGTTAA 58.720 34.615 0.00 0.00 46.01 2.01
100 101 6.826668 TGAGATGTTTCAGGAGTTGAAGTTA 58.173 36.000 0.00 0.00 46.01 2.24
101 102 5.684704 TGAGATGTTTCAGGAGTTGAAGTT 58.315 37.500 0.00 0.00 46.01 2.66
102 103 5.296151 TGAGATGTTTCAGGAGTTGAAGT 57.704 39.130 0.00 0.00 46.01 3.01
103 104 7.466996 GCATATGAGATGTTTCAGGAGTTGAAG 60.467 40.741 6.97 0.00 46.01 3.02
104 105 6.317140 GCATATGAGATGTTTCAGGAGTTGAA 59.683 38.462 6.97 0.00 43.92 2.69
105 106 5.819379 GCATATGAGATGTTTCAGGAGTTGA 59.181 40.000 6.97 0.00 0.00 3.18
106 107 5.821470 AGCATATGAGATGTTTCAGGAGTTG 59.179 40.000 6.97 0.00 0.00 3.16
107 108 5.999044 AGCATATGAGATGTTTCAGGAGTT 58.001 37.500 6.97 0.00 0.00 3.01
108 109 5.454471 GGAGCATATGAGATGTTTCAGGAGT 60.454 44.000 6.97 0.00 0.00 3.85
109 110 4.996122 GGAGCATATGAGATGTTTCAGGAG 59.004 45.833 6.97 0.00 0.00 3.69
110 111 4.409901 TGGAGCATATGAGATGTTTCAGGA 59.590 41.667 6.97 0.00 0.00 3.86
111 112 4.711399 TGGAGCATATGAGATGTTTCAGG 58.289 43.478 6.97 0.00 0.00 3.86
112 113 5.995897 TCATGGAGCATATGAGATGTTTCAG 59.004 40.000 6.97 0.00 31.35 3.02
113 114 5.761726 GTCATGGAGCATATGAGATGTTTCA 59.238 40.000 6.97 0.00 35.39 2.69
114 115 5.107182 CGTCATGGAGCATATGAGATGTTTC 60.107 44.000 6.97 0.00 35.39 2.78
115 116 4.753610 CGTCATGGAGCATATGAGATGTTT 59.246 41.667 6.97 0.00 35.39 2.83
116 117 4.202295 ACGTCATGGAGCATATGAGATGTT 60.202 41.667 6.97 0.00 35.39 2.71
117 118 3.323115 ACGTCATGGAGCATATGAGATGT 59.677 43.478 6.97 2.89 35.39 3.06
118 119 3.922910 ACGTCATGGAGCATATGAGATG 58.077 45.455 6.97 2.48 35.39 2.90
119 120 4.039609 TGAACGTCATGGAGCATATGAGAT 59.960 41.667 6.97 0.00 35.39 2.75
120 121 3.384467 TGAACGTCATGGAGCATATGAGA 59.616 43.478 6.97 0.00 35.39 3.27
121 122 3.721035 TGAACGTCATGGAGCATATGAG 58.279 45.455 6.97 0.00 35.39 2.90
122 123 3.817709 TGAACGTCATGGAGCATATGA 57.182 42.857 6.97 0.00 32.44 2.15
123 124 4.880886 TTTGAACGTCATGGAGCATATG 57.119 40.909 0.00 0.00 0.00 1.78
124 125 5.235305 GTTTTGAACGTCATGGAGCATAT 57.765 39.130 0.00 0.00 0.00 1.78
125 126 4.678509 GTTTTGAACGTCATGGAGCATA 57.321 40.909 0.00 0.00 0.00 3.14
126 127 3.559238 GTTTTGAACGTCATGGAGCAT 57.441 42.857 0.00 0.00 0.00 3.79
138 139 3.348309 GGACTTCAACGACGTTTTGAAC 58.652 45.455 11.24 11.49 37.91 3.18
139 140 2.352342 GGGACTTCAACGACGTTTTGAA 59.648 45.455 19.43 19.43 39.99 2.69
140 141 1.935199 GGGACTTCAACGACGTTTTGA 59.065 47.619 11.24 4.19 0.00 2.69
141 142 1.332552 CGGGACTTCAACGACGTTTTG 60.333 52.381 11.24 1.38 0.00 2.44
142 143 0.932399 CGGGACTTCAACGACGTTTT 59.068 50.000 11.24 0.00 0.00 2.43
143 144 0.102844 TCGGGACTTCAACGACGTTT 59.897 50.000 11.24 0.00 0.00 3.60
144 145 0.316204 ATCGGGACTTCAACGACGTT 59.684 50.000 7.57 7.57 39.64 3.99
145 146 0.316204 AATCGGGACTTCAACGACGT 59.684 50.000 0.00 0.00 39.64 4.34
146 147 0.989890 GAATCGGGACTTCAACGACG 59.010 55.000 0.00 0.00 39.64 5.12
147 148 2.365408 AGAATCGGGACTTCAACGAC 57.635 50.000 0.00 0.00 39.64 4.34
148 149 3.675228 GCTTAGAATCGGGACTTCAACGA 60.675 47.826 0.00 0.00 41.20 3.85
149 150 2.603560 GCTTAGAATCGGGACTTCAACG 59.396 50.000 0.00 0.00 0.00 4.10
150 151 2.937149 GGCTTAGAATCGGGACTTCAAC 59.063 50.000 0.00 0.00 0.00 3.18
151 152 2.418197 CGGCTTAGAATCGGGACTTCAA 60.418 50.000 0.00 0.00 0.00 2.69
152 153 1.136305 CGGCTTAGAATCGGGACTTCA 59.864 52.381 0.00 0.00 0.00 3.02
153 154 1.136500 ACGGCTTAGAATCGGGACTTC 59.864 52.381 0.00 0.00 0.00 3.01
154 155 1.192428 ACGGCTTAGAATCGGGACTT 58.808 50.000 0.00 0.00 0.00 3.01
155 156 2.062971 TACGGCTTAGAATCGGGACT 57.937 50.000 0.00 0.00 0.00 3.85
156 157 2.877043 TTACGGCTTAGAATCGGGAC 57.123 50.000 0.00 0.00 0.00 4.46
157 158 2.482490 GCTTTACGGCTTAGAATCGGGA 60.482 50.000 0.00 0.00 0.00 5.14
158 159 1.865340 GCTTTACGGCTTAGAATCGGG 59.135 52.381 0.00 0.00 0.00 5.14
159 160 2.546778 TGCTTTACGGCTTAGAATCGG 58.453 47.619 0.00 0.00 0.00 4.18
160 161 3.059597 CCATGCTTTACGGCTTAGAATCG 60.060 47.826 0.00 0.00 0.00 3.34
161 162 3.304057 GCCATGCTTTACGGCTTAGAATC 60.304 47.826 0.00 0.00 42.78 2.52
162 163 2.618709 GCCATGCTTTACGGCTTAGAAT 59.381 45.455 0.00 0.00 42.78 2.40
163 164 2.014128 GCCATGCTTTACGGCTTAGAA 58.986 47.619 0.00 0.00 42.78 2.10
164 165 1.065782 TGCCATGCTTTACGGCTTAGA 60.066 47.619 0.00 0.00 46.39 2.10
165 166 1.064060 GTGCCATGCTTTACGGCTTAG 59.936 52.381 0.00 0.00 46.39 2.18
166 167 1.091537 GTGCCATGCTTTACGGCTTA 58.908 50.000 0.00 0.00 46.39 3.09
167 168 0.893270 TGTGCCATGCTTTACGGCTT 60.893 50.000 0.00 0.00 46.39 4.35
168 169 1.303236 TGTGCCATGCTTTACGGCT 60.303 52.632 0.00 0.00 46.39 5.52
169 170 1.154035 GTGTGCCATGCTTTACGGC 60.154 57.895 0.00 0.00 46.43 5.68
170 171 0.168788 CAGTGTGCCATGCTTTACGG 59.831 55.000 0.00 0.00 0.00 4.02
171 172 1.155889 TCAGTGTGCCATGCTTTACG 58.844 50.000 0.00 0.00 0.00 3.18
172 173 2.554032 AGTTCAGTGTGCCATGCTTTAC 59.446 45.455 0.00 0.00 0.00 2.01
173 174 2.862541 AGTTCAGTGTGCCATGCTTTA 58.137 42.857 0.00 0.00 0.00 1.85
174 175 1.696063 AGTTCAGTGTGCCATGCTTT 58.304 45.000 0.00 0.00 0.00 3.51
175 176 2.566833 TAGTTCAGTGTGCCATGCTT 57.433 45.000 0.00 0.00 0.00 3.91
176 177 2.751259 CAATAGTTCAGTGTGCCATGCT 59.249 45.455 0.00 0.00 0.00 3.79
177 178 2.749076 TCAATAGTTCAGTGTGCCATGC 59.251 45.455 0.00 0.00 0.00 4.06
178 179 4.005650 ACTCAATAGTTCAGTGTGCCATG 58.994 43.478 0.00 0.00 29.00 3.66
179 180 4.292186 ACTCAATAGTTCAGTGTGCCAT 57.708 40.909 0.00 0.00 29.00 4.40
180 181 3.769739 ACTCAATAGTTCAGTGTGCCA 57.230 42.857 0.00 0.00 29.00 4.92
181 182 4.822026 ACTACTCAATAGTTCAGTGTGCC 58.178 43.478 0.00 0.00 41.71 5.01
182 183 5.470368 TGACTACTCAATAGTTCAGTGTGC 58.530 41.667 0.00 0.00 44.64 4.57
183 184 7.315890 TGATGACTACTCAATAGTTCAGTGTG 58.684 38.462 0.00 0.00 44.64 3.82
184 185 7.468141 TGATGACTACTCAATAGTTCAGTGT 57.532 36.000 0.00 0.00 44.64 3.55
185 186 6.475076 GCTGATGACTACTCAATAGTTCAGTG 59.525 42.308 13.43 0.00 44.17 3.66
186 187 6.379703 AGCTGATGACTACTCAATAGTTCAGT 59.620 38.462 13.43 0.00 44.17 3.41
187 188 6.804677 AGCTGATGACTACTCAATAGTTCAG 58.195 40.000 9.80 9.80 44.64 3.02
188 189 6.782082 AGCTGATGACTACTCAATAGTTCA 57.218 37.500 0.00 0.00 44.64 3.18
189 190 7.465245 GCAAAGCTGATGACTACTCAATAGTTC 60.465 40.741 4.04 0.00 44.64 3.01
190 191 6.314896 GCAAAGCTGATGACTACTCAATAGTT 59.685 38.462 4.04 0.00 44.64 2.24
191 192 6.351711 AGCAAAGCTGATGACTACTCAATAGT 60.352 38.462 4.04 0.00 41.68 2.12
192 193 6.047870 AGCAAAGCTGATGACTACTCAATAG 58.952 40.000 4.04 0.00 37.57 1.73
193 194 5.982356 AGCAAAGCTGATGACTACTCAATA 58.018 37.500 4.04 0.00 37.57 1.90
194 195 4.841422 AGCAAAGCTGATGACTACTCAAT 58.159 39.130 4.04 0.00 37.57 2.57
195 196 4.020751 AGAGCAAAGCTGATGACTACTCAA 60.021 41.667 0.00 0.00 39.88 3.02
196 197 3.513119 AGAGCAAAGCTGATGACTACTCA 59.487 43.478 0.00 0.00 39.88 3.41
197 198 3.864583 CAGAGCAAAGCTGATGACTACTC 59.135 47.826 0.00 1.65 39.88 2.59
198 199 3.859443 CAGAGCAAAGCTGATGACTACT 58.141 45.455 0.00 0.00 39.88 2.57
199 200 2.351111 GCAGAGCAAAGCTGATGACTAC 59.649 50.000 0.00 0.00 39.88 2.73
200 201 2.625737 GCAGAGCAAAGCTGATGACTA 58.374 47.619 0.00 0.00 39.88 2.59
201 202 1.451067 GCAGAGCAAAGCTGATGACT 58.549 50.000 0.00 1.20 39.88 3.41
202 203 0.450983 GGCAGAGCAAAGCTGATGAC 59.549 55.000 0.00 0.00 39.88 3.06
203 204 0.037160 TGGCAGAGCAAAGCTGATGA 59.963 50.000 0.00 0.00 39.88 2.92
204 205 0.452184 CTGGCAGAGCAAAGCTGATG 59.548 55.000 9.42 0.00 39.88 3.07
205 206 0.327259 TCTGGCAGAGCAAAGCTGAT 59.673 50.000 14.43 0.00 39.88 2.90
206 207 0.604780 GTCTGGCAGAGCAAAGCTGA 60.605 55.000 19.38 0.00 39.88 4.26
207 208 1.874562 GTCTGGCAGAGCAAAGCTG 59.125 57.895 19.38 0.00 39.88 4.24
208 209 1.670406 CGTCTGGCAGAGCAAAGCT 60.670 57.895 19.38 0.00 43.88 3.74
209 210 1.510480 AACGTCTGGCAGAGCAAAGC 61.510 55.000 19.38 3.79 0.00 3.51
210 211 0.514691 GAACGTCTGGCAGAGCAAAG 59.485 55.000 19.38 9.60 0.00 2.77
211 212 0.179059 TGAACGTCTGGCAGAGCAAA 60.179 50.000 19.38 0.00 0.00 3.68
212 213 0.035317 ATGAACGTCTGGCAGAGCAA 59.965 50.000 19.38 2.53 0.00 3.91
213 214 0.894835 TATGAACGTCTGGCAGAGCA 59.105 50.000 19.38 13.89 0.00 4.26
214 215 1.661112 GTTATGAACGTCTGGCAGAGC 59.339 52.381 19.38 11.86 0.00 4.09
215 216 2.959516 TGTTATGAACGTCTGGCAGAG 58.040 47.619 19.38 14.26 0.00 3.35
216 217 3.521560 GATGTTATGAACGTCTGGCAGA 58.478 45.455 14.43 14.43 42.73 4.26
217 218 2.609459 GGATGTTATGAACGTCTGGCAG 59.391 50.000 8.58 8.58 44.84 4.85
218 219 2.627945 GGATGTTATGAACGTCTGGCA 58.372 47.619 10.51 0.00 44.84 4.92
219 220 1.593006 CGGATGTTATGAACGTCTGGC 59.407 52.381 11.11 0.00 45.73 4.85
222 223 1.801395 CGCCGGATGTTATGAACGTCT 60.801 52.381 5.05 0.00 44.84 4.18
223 224 0.575390 CGCCGGATGTTATGAACGTC 59.425 55.000 5.05 3.43 44.76 4.34
224 225 0.108520 ACGCCGGATGTTATGAACGT 60.109 50.000 5.05 0.00 0.00 3.99
225 226 1.003851 AACGCCGGATGTTATGAACG 58.996 50.000 5.05 0.00 0.00 3.95
226 227 1.531058 GCAACGCCGGATGTTATGAAC 60.531 52.381 5.05 0.00 0.00 3.18
227 228 0.730265 GCAACGCCGGATGTTATGAA 59.270 50.000 5.05 0.00 0.00 2.57
228 229 0.107897 AGCAACGCCGGATGTTATGA 60.108 50.000 5.05 0.00 0.00 2.15
229 230 0.304705 GAGCAACGCCGGATGTTATG 59.695 55.000 5.05 0.00 0.00 1.90
230 231 0.814010 GGAGCAACGCCGGATGTTAT 60.814 55.000 5.05 0.86 0.00 1.89
231 232 1.448893 GGAGCAACGCCGGATGTTA 60.449 57.895 5.05 0.00 0.00 2.41
232 233 2.746277 GGAGCAACGCCGGATGTT 60.746 61.111 5.05 6.08 0.00 2.71
233 234 3.958147 CTGGAGCAACGCCGGATGT 62.958 63.158 5.05 0.00 31.17 3.06
234 235 3.197790 CTGGAGCAACGCCGGATG 61.198 66.667 5.05 0.91 31.17 3.51
246 247 4.798344 CCAGGCCTGCTGCTGGAG 62.798 72.222 28.39 15.63 39.32 3.86
250 251 4.608774 TTTGCCAGGCCTGCTGCT 62.609 61.111 28.39 0.00 40.92 4.24
251 252 2.847435 GATTTTGCCAGGCCTGCTGC 62.847 60.000 28.39 25.27 40.16 5.25
252 253 1.217244 GATTTTGCCAGGCCTGCTG 59.783 57.895 28.39 15.99 0.00 4.41
253 254 1.077985 AGATTTTGCCAGGCCTGCT 59.922 52.632 28.39 14.04 0.00 4.24
254 255 1.217244 CAGATTTTGCCAGGCCTGC 59.783 57.895 28.39 22.00 0.00 4.85
255 256 1.407979 GATCAGATTTTGCCAGGCCTG 59.592 52.381 26.87 26.87 0.00 4.85
256 257 1.687368 GGATCAGATTTTGCCAGGCCT 60.687 52.381 9.64 0.00 0.00 5.19
257 258 0.749049 GGATCAGATTTTGCCAGGCC 59.251 55.000 9.64 0.00 0.00 5.19
258 259 1.477553 TGGATCAGATTTTGCCAGGC 58.522 50.000 3.66 3.66 0.00 4.85
259 260 4.748277 AATTGGATCAGATTTTGCCAGG 57.252 40.909 0.00 0.00 0.00 4.45
260 261 6.183360 CGAAAAATTGGATCAGATTTTGCCAG 60.183 38.462 15.01 7.05 36.06 4.85
261 262 5.638657 CGAAAAATTGGATCAGATTTTGCCA 59.361 36.000 15.01 0.00 36.06 4.92
262 263 5.639082 ACGAAAAATTGGATCAGATTTTGCC 59.361 36.000 15.01 10.85 36.06 4.52
1151 1154 7.038017 ACCAAGGTCTATCTTTTTGATCAGAGA 60.038 37.037 0.00 1.82 36.65 3.10
1218 1221 1.417890 CTCCATCGGAACAATAGGGCT 59.582 52.381 0.00 0.00 0.00 5.19
1621 1624 5.121298 TCACAATTTCTTGAAGCTCGATCTG 59.879 40.000 0.00 0.00 36.20 2.90
1983 1986 8.460831 GTAATAACGAACTTGCAAAATGGATT 57.539 30.769 0.00 0.00 0.00 3.01
2127 2130 6.139679 TCATCTTAGGGTGATCCTTTTGTT 57.860 37.500 0.00 0.00 45.47 2.83
2399 2406 1.805945 CGCACGGCTCCTAAGTGAC 60.806 63.158 0.00 0.00 38.06 3.67
2564 2571 6.071984 TCACTTAGAGGATTAGAGGGATGTC 58.928 44.000 0.00 0.00 0.00 3.06
2565 2572 6.031964 TCACTTAGAGGATTAGAGGGATGT 57.968 41.667 0.00 0.00 0.00 3.06
2566 2573 7.552050 AATCACTTAGAGGATTAGAGGGATG 57.448 40.000 3.05 0.00 31.26 3.51
2567 2574 7.394923 CGTAATCACTTAGAGGATTAGAGGGAT 59.605 40.741 9.85 0.00 36.84 3.85
2568 2575 6.715718 CGTAATCACTTAGAGGATTAGAGGGA 59.284 42.308 9.85 0.00 36.84 4.20
2569 2576 6.490721 ACGTAATCACTTAGAGGATTAGAGGG 59.509 42.308 9.85 5.20 36.84 4.30
2570 2577 7.228906 TCACGTAATCACTTAGAGGATTAGAGG 59.771 40.741 9.85 6.80 36.84 3.69
2571 2578 8.155821 TCACGTAATCACTTAGAGGATTAGAG 57.844 38.462 9.85 9.71 36.84 2.43
2572 2579 8.693120 ATCACGTAATCACTTAGAGGATTAGA 57.307 34.615 9.85 6.43 36.84 2.10
2573 2580 8.024285 GGATCACGTAATCACTTAGAGGATTAG 58.976 40.741 0.13 7.92 36.84 1.73
2574 2581 7.504574 TGGATCACGTAATCACTTAGAGGATTA 59.495 37.037 0.13 6.89 35.49 1.75
2575 2582 6.323996 TGGATCACGTAATCACTTAGAGGATT 59.676 38.462 0.13 8.37 37.49 3.01
2576 2583 5.833667 TGGATCACGTAATCACTTAGAGGAT 59.166 40.000 0.13 0.00 0.00 3.24
2577 2584 5.198207 TGGATCACGTAATCACTTAGAGGA 58.802 41.667 0.13 0.00 0.00 3.71
2578 2585 5.515797 TGGATCACGTAATCACTTAGAGG 57.484 43.478 0.13 0.00 0.00 3.69
2579 2586 7.706607 TGATTTGGATCACGTAATCACTTAGAG 59.293 37.037 0.13 0.00 37.37 2.43
2580 2587 7.552459 TGATTTGGATCACGTAATCACTTAGA 58.448 34.615 0.13 0.00 37.37 2.10
2581 2588 7.770801 TGATTTGGATCACGTAATCACTTAG 57.229 36.000 0.13 0.00 37.37 2.18
2582 2589 7.822334 AGTTGATTTGGATCACGTAATCACTTA 59.178 33.333 8.33 0.00 41.84 2.24
2583 2590 6.655003 AGTTGATTTGGATCACGTAATCACTT 59.345 34.615 8.33 0.00 41.84 3.16
2584 2591 6.173339 AGTTGATTTGGATCACGTAATCACT 58.827 36.000 8.33 7.03 41.84 3.41
2585 2592 6.422776 AGTTGATTTGGATCACGTAATCAC 57.577 37.500 8.33 5.34 41.84 3.06
2586 2593 8.554835 TTTAGTTGATTTGGATCACGTAATCA 57.445 30.769 0.13 3.12 41.84 2.57
2587 2594 9.651718 GATTTAGTTGATTTGGATCACGTAATC 57.348 33.333 0.00 0.00 41.84 1.75
2588 2595 9.173021 TGATTTAGTTGATTTGGATCACGTAAT 57.827 29.630 0.00 0.00 41.84 1.89
2589 2596 8.554835 TGATTTAGTTGATTTGGATCACGTAA 57.445 30.769 0.00 0.00 41.84 3.18
2590 2597 8.611757 CATGATTTAGTTGATTTGGATCACGTA 58.388 33.333 0.00 0.00 41.84 3.57
2591 2598 7.121168 ACATGATTTAGTTGATTTGGATCACGT 59.879 33.333 0.00 0.00 41.84 4.49
2592 2599 7.475015 ACATGATTTAGTTGATTTGGATCACG 58.525 34.615 0.00 0.00 41.84 4.35
2593 2600 7.917505 GGACATGATTTAGTTGATTTGGATCAC 59.082 37.037 0.00 0.00 41.84 3.06
2594 2601 7.201723 CGGACATGATTTAGTTGATTTGGATCA 60.202 37.037 0.00 0.00 40.46 2.92
2595 2602 7.012327 TCGGACATGATTTAGTTGATTTGGATC 59.988 37.037 0.00 0.00 0.00 3.36
2596 2603 6.828273 TCGGACATGATTTAGTTGATTTGGAT 59.172 34.615 0.00 0.00 0.00 3.41
2597 2604 6.176896 TCGGACATGATTTAGTTGATTTGGA 58.823 36.000 0.00 0.00 0.00 3.53
2598 2605 6.435430 TCGGACATGATTTAGTTGATTTGG 57.565 37.500 0.00 0.00 0.00 3.28
2599 2606 7.696755 TGATCGGACATGATTTAGTTGATTTG 58.303 34.615 0.00 0.00 0.00 2.32
2600 2607 7.864108 TGATCGGACATGATTTAGTTGATTT 57.136 32.000 0.00 0.00 0.00 2.17
2601 2608 7.716560 TGATGATCGGACATGATTTAGTTGATT 59.283 33.333 0.00 0.00 0.00 2.57
2602 2609 7.172190 GTGATGATCGGACATGATTTAGTTGAT 59.828 37.037 0.00 0.00 0.00 2.57
2603 2610 6.479990 GTGATGATCGGACATGATTTAGTTGA 59.520 38.462 0.00 0.00 0.00 3.18
2604 2611 6.562825 CGTGATGATCGGACATGATTTAGTTG 60.563 42.308 0.00 0.00 0.00 3.16
2605 2612 5.463392 CGTGATGATCGGACATGATTTAGTT 59.537 40.000 0.00 0.00 0.00 2.24
2606 2613 4.984785 CGTGATGATCGGACATGATTTAGT 59.015 41.667 0.00 0.00 0.00 2.24
2607 2614 4.984785 ACGTGATGATCGGACATGATTTAG 59.015 41.667 0.00 0.00 0.00 1.85
2608 2615 4.744631 CACGTGATGATCGGACATGATTTA 59.255 41.667 10.90 0.00 0.00 1.40
2609 2616 3.557185 CACGTGATGATCGGACATGATTT 59.443 43.478 10.90 0.00 0.00 2.17
2610 2617 3.126073 CACGTGATGATCGGACATGATT 58.874 45.455 10.90 0.00 0.00 2.57
2611 2618 2.362077 TCACGTGATGATCGGACATGAT 59.638 45.455 15.76 0.00 29.99 2.45
2612 2619 1.748493 TCACGTGATGATCGGACATGA 59.252 47.619 15.76 0.00 29.99 3.07
2613 2620 2.122564 CTCACGTGATGATCGGACATG 58.877 52.381 20.40 0.00 36.48 3.21
2614 2621 2.024414 TCTCACGTGATGATCGGACAT 58.976 47.619 20.40 0.00 36.48 3.06
2615 2622 1.459450 TCTCACGTGATGATCGGACA 58.541 50.000 20.40 0.00 36.48 4.02
2616 2623 2.389059 CATCTCACGTGATGATCGGAC 58.611 52.381 20.40 0.00 44.71 4.79
2617 2624 1.338020 CCATCTCACGTGATGATCGGA 59.662 52.381 20.40 12.04 44.71 4.55
2618 2625 1.338020 TCCATCTCACGTGATGATCGG 59.662 52.381 20.40 21.82 44.71 4.18
2619 2626 2.033927 ACTCCATCTCACGTGATGATCG 59.966 50.000 20.40 15.51 44.71 3.69
2620 2627 3.724508 ACTCCATCTCACGTGATGATC 57.275 47.619 20.40 0.00 44.71 2.92
2621 2628 4.211125 ACTACTCCATCTCACGTGATGAT 58.789 43.478 20.40 19.36 44.71 2.45
2622 2629 3.621558 ACTACTCCATCTCACGTGATGA 58.378 45.455 20.40 18.00 44.71 2.92
2623 2630 4.377839 AACTACTCCATCTCACGTGATG 57.622 45.455 20.40 15.30 42.38 3.07
2624 2631 4.462834 TGAAACTACTCCATCTCACGTGAT 59.537 41.667 20.40 1.42 0.00 3.06
2625 2632 3.824443 TGAAACTACTCCATCTCACGTGA 59.176 43.478 18.88 18.88 0.00 4.35
2626 2633 4.174411 TGAAACTACTCCATCTCACGTG 57.826 45.455 9.94 9.94 0.00 4.49
2627 2634 5.171476 CAATGAAACTACTCCATCTCACGT 58.829 41.667 0.00 0.00 0.00 4.49
2628 2635 4.568359 CCAATGAAACTACTCCATCTCACG 59.432 45.833 0.00 0.00 0.00 4.35
2629 2636 5.352569 CACCAATGAAACTACTCCATCTCAC 59.647 44.000 0.00 0.00 0.00 3.51
2630 2637 5.248248 TCACCAATGAAACTACTCCATCTCA 59.752 40.000 0.00 0.00 0.00 3.27
2631 2638 5.734720 TCACCAATGAAACTACTCCATCTC 58.265 41.667 0.00 0.00 0.00 2.75
2632 2639 5.762179 TCACCAATGAAACTACTCCATCT 57.238 39.130 0.00 0.00 0.00 2.90
2633 2640 5.705441 TGTTCACCAATGAAACTACTCCATC 59.295 40.000 0.00 0.00 46.40 3.51
2634 2641 5.630121 TGTTCACCAATGAAACTACTCCAT 58.370 37.500 0.00 0.00 46.40 3.41
2635 2642 5.042463 TGTTCACCAATGAAACTACTCCA 57.958 39.130 0.00 0.00 46.40 3.86
2636 2643 5.705441 TGATGTTCACCAATGAAACTACTCC 59.295 40.000 0.00 0.00 46.40 3.85
2637 2644 6.603095 GTGATGTTCACCAATGAAACTACTC 58.397 40.000 0.00 0.00 46.40 2.59
2638 2645 6.560253 GTGATGTTCACCAATGAAACTACT 57.440 37.500 0.00 0.00 46.40 2.57
2670 2677 8.552034 CGAGCGTGAATCATATAGTAGATATGA 58.448 37.037 9.14 9.14 42.90 2.15
2671 2678 8.552034 TCGAGCGTGAATCATATAGTAGATATG 58.448 37.037 0.00 0.00 34.26 1.78
2672 2679 8.552865 GTCGAGCGTGAATCATATAGTAGATAT 58.447 37.037 0.00 0.00 0.00 1.63
2673 2680 7.011202 GGTCGAGCGTGAATCATATAGTAGATA 59.989 40.741 0.00 0.00 0.00 1.98
2674 2681 6.183360 GGTCGAGCGTGAATCATATAGTAGAT 60.183 42.308 0.00 0.00 0.00 1.98
2675 2682 5.121925 GGTCGAGCGTGAATCATATAGTAGA 59.878 44.000 0.00 0.00 0.00 2.59
2676 2683 5.122554 AGGTCGAGCGTGAATCATATAGTAG 59.877 44.000 9.28 0.00 0.00 2.57
2677 2684 5.001874 AGGTCGAGCGTGAATCATATAGTA 58.998 41.667 9.28 0.00 0.00 1.82
2678 2685 3.821600 AGGTCGAGCGTGAATCATATAGT 59.178 43.478 9.28 0.00 0.00 2.12
2679 2686 4.427096 AGGTCGAGCGTGAATCATATAG 57.573 45.455 9.28 0.00 0.00 1.31
2680 2687 4.848562 AAGGTCGAGCGTGAATCATATA 57.151 40.909 9.28 0.00 0.00 0.86
2681 2688 3.735237 AAGGTCGAGCGTGAATCATAT 57.265 42.857 9.28 0.00 0.00 1.78
2682 2689 3.520290 AAAGGTCGAGCGTGAATCATA 57.480 42.857 9.28 0.00 0.00 2.15
2683 2690 2.386661 AAAGGTCGAGCGTGAATCAT 57.613 45.000 9.28 0.00 0.00 2.45
2684 2691 1.798223 CAAAAGGTCGAGCGTGAATCA 59.202 47.619 9.28 0.00 0.00 2.57
2685 2692 1.128692 CCAAAAGGTCGAGCGTGAATC 59.871 52.381 9.28 0.00 0.00 2.52
2686 2693 1.156736 CCAAAAGGTCGAGCGTGAAT 58.843 50.000 9.28 0.00 0.00 2.57
2687 2694 0.179067 ACCAAAAGGTCGAGCGTGAA 60.179 50.000 9.28 0.00 0.00 3.18
2688 2695 0.599204 GACCAAAAGGTCGAGCGTGA 60.599 55.000 9.28 0.00 0.00 4.35
2689 2696 0.600255 AGACCAAAAGGTCGAGCGTG 60.600 55.000 9.28 8.79 43.02 5.34
2690 2697 0.319641 GAGACCAAAAGGTCGAGCGT 60.320 55.000 9.28 2.41 43.02 5.07
2691 2698 1.014564 GGAGACCAAAAGGTCGAGCG 61.015 60.000 9.28 0.00 43.02 5.03
2692 2699 1.014564 CGGAGACCAAAAGGTCGAGC 61.015 60.000 6.48 6.48 43.02 5.03
2693 2700 0.317479 ACGGAGACCAAAAGGTCGAG 59.683 55.000 8.85 7.13 43.02 4.04
2694 2701 0.032952 CACGGAGACCAAAAGGTCGA 59.967 55.000 8.85 0.00 43.02 4.20
2695 2702 0.249741 ACACGGAGACCAAAAGGTCG 60.250 55.000 8.85 1.35 43.02 4.79
2696 2703 1.871676 GAACACGGAGACCAAAAGGTC 59.128 52.381 6.55 6.55 39.01 3.85
2697 2704 1.476291 GGAACACGGAGACCAAAAGGT 60.476 52.381 0.00 0.00 0.00 3.50
2698 2705 1.235724 GGAACACGGAGACCAAAAGG 58.764 55.000 0.00 0.00 0.00 3.11
2699 2706 0.865769 CGGAACACGGAGACCAAAAG 59.134 55.000 0.00 0.00 39.42 2.27
2700 2707 0.464870 TCGGAACACGGAGACCAAAA 59.535 50.000 0.00 0.00 44.45 2.44
2701 2708 0.032952 CTCGGAACACGGAGACCAAA 59.967 55.000 0.00 0.00 44.45 3.28
2702 2709 1.663739 CTCGGAACACGGAGACCAA 59.336 57.895 0.00 0.00 44.45 3.67
2703 2710 2.273179 CCTCGGAACACGGAGACCA 61.273 63.158 0.00 0.00 44.45 4.02
2704 2711 2.572284 CCTCGGAACACGGAGACC 59.428 66.667 0.00 0.00 44.45 3.85
2705 2712 2.126031 GCCTCGGAACACGGAGAC 60.126 66.667 0.00 0.00 44.45 3.36
2706 2713 3.379445 GGCCTCGGAACACGGAGA 61.379 66.667 0.00 0.00 44.45 3.71
2707 2714 1.672854 TATGGCCTCGGAACACGGAG 61.673 60.000 3.32 0.00 44.45 4.63
2708 2715 1.046472 ATATGGCCTCGGAACACGGA 61.046 55.000 3.32 0.00 44.45 4.69
2709 2716 0.600255 GATATGGCCTCGGAACACGG 60.600 60.000 3.32 0.00 44.45 4.94
2710 2717 0.389391 AGATATGGCCTCGGAACACG 59.611 55.000 3.32 0.00 46.11 4.49
2711 2718 1.139058 ACAGATATGGCCTCGGAACAC 59.861 52.381 3.32 0.00 0.00 3.32
2712 2719 1.496060 ACAGATATGGCCTCGGAACA 58.504 50.000 3.32 0.00 0.00 3.18
2713 2720 3.963428 ATACAGATATGGCCTCGGAAC 57.037 47.619 3.32 0.00 0.00 3.62
2714 2721 4.141937 GCATATACAGATATGGCCTCGGAA 60.142 45.833 3.32 0.00 43.60 4.30
2715 2722 3.384789 GCATATACAGATATGGCCTCGGA 59.615 47.826 3.32 0.00 43.60 4.55
2716 2723 3.386078 AGCATATACAGATATGGCCTCGG 59.614 47.826 3.32 0.00 43.60 4.63
2717 2724 4.662468 AGCATATACAGATATGGCCTCG 57.338 45.455 3.32 0.00 43.60 4.63
2718 2725 5.121811 CCAAGCATATACAGATATGGCCTC 58.878 45.833 3.32 0.00 43.60 4.70
2719 2726 4.627255 GCCAAGCATATACAGATATGGCCT 60.627 45.833 3.32 0.00 43.60 5.19
2720 2727 3.629398 GCCAAGCATATACAGATATGGCC 59.371 47.826 0.00 0.00 43.60 5.36
2721 2728 4.521146 AGCCAAGCATATACAGATATGGC 58.479 43.478 5.35 5.35 43.60 4.40
2722 2729 4.807834 CGAGCCAAGCATATACAGATATGG 59.192 45.833 6.98 0.00 43.60 2.74
2723 2730 5.414360 ACGAGCCAAGCATATACAGATATG 58.586 41.667 0.00 1.34 45.41 1.78
2724 2731 5.185828 TGACGAGCCAAGCATATACAGATAT 59.814 40.000 0.00 0.00 0.00 1.63
2725 2732 4.522789 TGACGAGCCAAGCATATACAGATA 59.477 41.667 0.00 0.00 0.00 1.98
2726 2733 3.321968 TGACGAGCCAAGCATATACAGAT 59.678 43.478 0.00 0.00 0.00 2.90
2727 2734 2.693074 TGACGAGCCAAGCATATACAGA 59.307 45.455 0.00 0.00 0.00 3.41
2728 2735 3.097877 TGACGAGCCAAGCATATACAG 57.902 47.619 0.00 0.00 0.00 2.74
2729 2736 3.118775 ACTTGACGAGCCAAGCATATACA 60.119 43.478 13.72 0.00 45.47 2.29
2730 2737 3.458189 ACTTGACGAGCCAAGCATATAC 58.542 45.455 13.72 0.00 45.47 1.47
2731 2738 3.819564 ACTTGACGAGCCAAGCATATA 57.180 42.857 13.72 0.00 45.47 0.86
2732 2739 2.698855 ACTTGACGAGCCAAGCATAT 57.301 45.000 13.72 0.00 45.47 1.78
2733 2740 2.472695 AACTTGACGAGCCAAGCATA 57.527 45.000 13.72 0.00 45.47 3.14
2734 2741 1.609208 AAACTTGACGAGCCAAGCAT 58.391 45.000 13.72 4.45 45.47 3.79
2735 2742 2.248280 TAAACTTGACGAGCCAAGCA 57.752 45.000 13.72 1.83 45.47 3.91
2736 2743 2.350484 GGTTAAACTTGACGAGCCAAGC 60.350 50.000 13.72 0.00 45.47 4.01
2737 2744 3.058914 CAGGTTAAACTTGACGAGCCAAG 60.059 47.826 12.71 12.71 46.61 3.61
2738 2745 2.875933 CAGGTTAAACTTGACGAGCCAA 59.124 45.455 0.00 0.00 0.00 4.52
2739 2746 2.103432 TCAGGTTAAACTTGACGAGCCA 59.897 45.455 0.00 0.00 28.69 4.75
2740 2747 2.737252 CTCAGGTTAAACTTGACGAGCC 59.263 50.000 0.00 0.00 30.70 4.70
2741 2748 3.391049 ACTCAGGTTAAACTTGACGAGC 58.609 45.455 5.69 0.00 30.70 5.03
2742 2749 6.310711 GGAATACTCAGGTTAAACTTGACGAG 59.689 42.308 4.48 4.48 30.70 4.18
2743 2750 6.161381 GGAATACTCAGGTTAAACTTGACGA 58.839 40.000 0.00 0.00 30.70 4.20
2744 2751 5.061808 CGGAATACTCAGGTTAAACTTGACG 59.938 44.000 0.00 0.00 30.70 4.35
2745 2752 5.163884 GCGGAATACTCAGGTTAAACTTGAC 60.164 44.000 0.00 0.00 30.70 3.18
2746 2753 4.933400 GCGGAATACTCAGGTTAAACTTGA 59.067 41.667 0.00 0.00 33.03 3.02
2747 2754 4.201685 CGCGGAATACTCAGGTTAAACTTG 60.202 45.833 0.00 0.00 0.00 3.16
2748 2755 3.930848 CGCGGAATACTCAGGTTAAACTT 59.069 43.478 0.00 0.00 0.00 2.66
2749 2756 3.056322 ACGCGGAATACTCAGGTTAAACT 60.056 43.478 12.47 0.00 0.00 2.66
2750 2757 3.061697 CACGCGGAATACTCAGGTTAAAC 59.938 47.826 12.47 0.00 0.00 2.01
2751 2758 3.255725 CACGCGGAATACTCAGGTTAAA 58.744 45.455 12.47 0.00 0.00 1.52
2752 2759 2.231964 ACACGCGGAATACTCAGGTTAA 59.768 45.455 12.47 0.00 0.00 2.01
2753 2760 1.820519 ACACGCGGAATACTCAGGTTA 59.179 47.619 12.47 0.00 0.00 2.85
2754 2761 0.606604 ACACGCGGAATACTCAGGTT 59.393 50.000 12.47 0.00 0.00 3.50
2755 2762 0.108804 CACACGCGGAATACTCAGGT 60.109 55.000 12.47 0.00 0.00 4.00
2756 2763 1.421410 GCACACGCGGAATACTCAGG 61.421 60.000 12.47 0.00 0.00 3.86
2757 2764 0.735978 TGCACACGCGGAATACTCAG 60.736 55.000 12.47 0.00 42.97 3.35
2758 2765 0.319986 TTGCACACGCGGAATACTCA 60.320 50.000 12.47 0.00 42.97 3.41
2759 2766 0.094730 GTTGCACACGCGGAATACTC 59.905 55.000 12.47 0.00 42.97 2.59
2760 2767 0.320421 AGTTGCACACGCGGAATACT 60.320 50.000 12.47 2.92 42.97 2.12
2761 2768 0.179225 CAGTTGCACACGCGGAATAC 60.179 55.000 12.47 0.29 42.97 1.89
2762 2769 0.601576 ACAGTTGCACACGCGGAATA 60.602 50.000 12.47 0.00 42.97 1.75
2763 2770 1.444119 AACAGTTGCACACGCGGAAT 61.444 50.000 12.47 0.00 42.97 3.01
2764 2771 1.649390 AAACAGTTGCACACGCGGAA 61.649 50.000 12.47 0.00 42.97 4.30
2765 2772 1.649390 AAAACAGTTGCACACGCGGA 61.649 50.000 12.47 0.00 42.97 5.54
2766 2773 1.226547 AAAACAGTTGCACACGCGG 60.227 52.632 12.47 1.27 42.97 6.46
2767 2774 1.909483 CAAAACAGTTGCACACGCG 59.091 52.632 3.53 3.53 42.97 6.01
2768 2775 1.630549 GCAAAACAGTTGCACACGC 59.369 52.632 6.19 0.00 44.34 5.34
2774 2781 0.459411 AACGGGTGCAAAACAGTTGC 60.459 50.000 4.12 4.12 45.11 4.17
2775 2782 1.276415 CAACGGGTGCAAAACAGTTG 58.724 50.000 12.99 12.99 40.25 3.16
2776 2783 0.892063 ACAACGGGTGCAAAACAGTT 59.108 45.000 0.00 0.00 33.26 3.16
2777 2784 1.752683 TACAACGGGTGCAAAACAGT 58.247 45.000 0.00 0.00 0.00 3.55
2778 2785 3.363341 AATACAACGGGTGCAAAACAG 57.637 42.857 0.00 0.00 0.00 3.16
2779 2786 3.130516 TCAAATACAACGGGTGCAAAACA 59.869 39.130 0.00 0.00 0.00 2.83
2780 2787 3.707793 TCAAATACAACGGGTGCAAAAC 58.292 40.909 0.00 0.00 0.00 2.43
2781 2788 4.113354 GTTCAAATACAACGGGTGCAAAA 58.887 39.130 0.00 0.00 0.00 2.44
2782 2789 3.707793 GTTCAAATACAACGGGTGCAAA 58.292 40.909 0.00 0.00 0.00 3.68
2783 2790 2.287069 CGTTCAAATACAACGGGTGCAA 60.287 45.455 0.00 0.00 42.36 4.08
2784 2791 1.264557 CGTTCAAATACAACGGGTGCA 59.735 47.619 0.00 0.00 42.36 4.57
2785 2792 1.958417 CGTTCAAATACAACGGGTGC 58.042 50.000 0.00 0.00 42.36 5.01
2791 2798 6.755141 TGATAGGCTCTACGTTCAAATACAAC 59.245 38.462 0.00 0.00 0.00 3.32
2792 2799 6.755141 GTGATAGGCTCTACGTTCAAATACAA 59.245 38.462 0.00 0.00 0.00 2.41
2793 2800 6.127563 TGTGATAGGCTCTACGTTCAAATACA 60.128 38.462 0.00 0.00 0.00 2.29
2794 2801 6.198591 GTGTGATAGGCTCTACGTTCAAATAC 59.801 42.308 0.00 0.00 0.00 1.89
2795 2802 6.270815 GTGTGATAGGCTCTACGTTCAAATA 58.729 40.000 0.00 0.00 0.00 1.40
2796 2803 5.109903 GTGTGATAGGCTCTACGTTCAAAT 58.890 41.667 0.00 0.00 0.00 2.32
2797 2804 4.491676 GTGTGATAGGCTCTACGTTCAAA 58.508 43.478 0.00 0.00 0.00 2.69
2798 2805 3.119245 GGTGTGATAGGCTCTACGTTCAA 60.119 47.826 0.00 0.00 0.00 2.69
2799 2806 2.426024 GGTGTGATAGGCTCTACGTTCA 59.574 50.000 0.00 0.00 0.00 3.18
2800 2807 2.223758 GGGTGTGATAGGCTCTACGTTC 60.224 54.545 0.00 0.00 0.00 3.95
2801 2808 1.755380 GGGTGTGATAGGCTCTACGTT 59.245 52.381 0.00 0.00 0.00 3.99
2802 2809 1.400737 GGGTGTGATAGGCTCTACGT 58.599 55.000 0.00 0.00 0.00 3.57
2803 2810 0.311165 CGGGTGTGATAGGCTCTACG 59.689 60.000 0.00 0.00 0.00 3.51
2804 2811 1.688772 TCGGGTGTGATAGGCTCTAC 58.311 55.000 0.00 0.00 0.00 2.59
2805 2812 2.158519 TGATCGGGTGTGATAGGCTCTA 60.159 50.000 0.00 0.00 0.00 2.43
2806 2813 1.333177 GATCGGGTGTGATAGGCTCT 58.667 55.000 0.00 0.00 0.00 4.09
2807 2814 1.040646 TGATCGGGTGTGATAGGCTC 58.959 55.000 0.00 0.00 0.00 4.70
2808 2815 1.620819 GATGATCGGGTGTGATAGGCT 59.379 52.381 0.00 0.00 0.00 4.58
2809 2816 1.344438 TGATGATCGGGTGTGATAGGC 59.656 52.381 0.00 0.00 0.00 3.93
2810 2817 2.608016 CGTGATGATCGGGTGTGATAGG 60.608 54.545 0.00 0.00 0.00 2.57
2811 2818 2.034685 ACGTGATGATCGGGTGTGATAG 59.965 50.000 0.00 0.00 0.00 2.08
2812 2819 2.028876 ACGTGATGATCGGGTGTGATA 58.971 47.619 0.00 0.00 0.00 2.15
2813 2820 0.824109 ACGTGATGATCGGGTGTGAT 59.176 50.000 0.00 0.00 0.00 3.06
2814 2821 0.108851 CACGTGATGATCGGGTGTGA 60.109 55.000 10.90 0.00 0.00 3.58
2815 2822 1.083806 CCACGTGATGATCGGGTGTG 61.084 60.000 19.30 6.94 0.00 3.82
2816 2823 1.218047 CCACGTGATGATCGGGTGT 59.782 57.895 19.30 0.00 0.00 4.16
2817 2824 1.083806 CACCACGTGATGATCGGGTG 61.084 60.000 19.30 10.19 40.29 4.61
2818 2825 1.218047 CACCACGTGATGATCGGGT 59.782 57.895 19.30 0.00 35.23 5.28
2819 2826 0.806102 GACACCACGTGATGATCGGG 60.806 60.000 19.08 1.85 36.96 5.14
2820 2827 0.173481 AGACACCACGTGATGATCGG 59.827 55.000 19.08 0.00 36.96 4.18
2821 2828 1.135402 TGAGACACCACGTGATGATCG 60.135 52.381 19.08 0.58 36.96 3.69
2822 2829 2.534298 CTGAGACACCACGTGATGATC 58.466 52.381 19.08 14.43 36.96 2.92
2823 2830 1.404717 GCTGAGACACCACGTGATGAT 60.405 52.381 19.08 4.23 36.96 2.45
2824 2831 0.038251 GCTGAGACACCACGTGATGA 60.038 55.000 19.08 0.00 36.96 2.92
2825 2832 0.319813 TGCTGAGACACCACGTGATG 60.320 55.000 19.30 14.17 36.96 3.07
2826 2833 0.319900 GTGCTGAGACACCACGTGAT 60.320 55.000 19.30 0.00 36.96 3.06
2827 2834 1.067416 GTGCTGAGACACCACGTGA 59.933 57.895 19.30 0.00 36.96 4.35
2828 2835 0.809636 TTGTGCTGAGACACCACGTG 60.810 55.000 9.08 9.08 39.93 4.49
2829 2836 0.107897 TTTGTGCTGAGACACCACGT 60.108 50.000 4.94 0.00 39.93 4.49
2830 2837 2.689083 TTTGTGCTGAGACACCACG 58.311 52.632 4.94 0.00 39.93 4.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.