Multiple sequence alignment - TraesCS3A01G538400

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G538400 chr3A 100.000 2628 0 0 1 2628 749414111 749416738 0.000000e+00 4854.0
1 TraesCS3A01G538400 chr3A 90.058 171 10 2 1218 1387 57004642 57004806 5.700000e-52 215.0
2 TraesCS3A01G538400 chr3A 85.075 201 18 5 1431 1628 57004892 57005083 7.420000e-46 195.0
3 TraesCS3A01G538400 chr3D 93.671 395 18 2 3 397 613746759 613747146 3.770000e-163 584.0
4 TraesCS3A01G538400 chr3D 82.460 496 49 24 1460 1948 613748312 613748776 1.470000e-107 399.0
5 TraesCS3A01G538400 chr3D 86.792 371 23 17 1029 1376 613747816 613748183 8.820000e-105 390.0
6 TraesCS3A01G538400 chr3D 84.466 309 18 14 604 901 613747418 613747707 7.160000e-71 278.0
7 TraesCS3A01G538400 chr3D 86.486 148 12 6 2459 2605 613749304 613749444 3.500000e-34 156.0
8 TraesCS3A01G538400 chr3B 91.960 398 21 4 3 396 822983101 822983491 4.950000e-152 547.0
9 TraesCS3A01G538400 chr3B 81.044 728 46 50 988 1634 822984203 822984919 1.820000e-136 496.0
10 TraesCS3A01G538400 chr3B 83.406 229 21 9 613 832 822983788 822984008 2.060000e-46 196.0
11 TraesCS3A01G538400 chr1D 87.179 195 25 0 22 216 25829259 25829453 3.400000e-54 222.0
12 TraesCS3A01G538400 chr5D 92.308 65 5 0 1085 1149 533913266 533913330 2.790000e-15 93.5
13 TraesCS3A01G538400 chr5B 90.769 65 6 0 1085 1149 673989009 673989073 1.300000e-13 87.9
14 TraesCS3A01G538400 chr5B 88.571 70 7 1 1267 1336 673989189 673989257 1.680000e-12 84.2
15 TraesCS3A01G538400 chr4A 88.571 70 7 1 1267 1336 637966402 637966334 1.680000e-12 84.2
16 TraesCS3A01G538400 chr4A 92.982 57 4 0 1085 1141 637966580 637966524 1.680000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G538400 chr3A 749414111 749416738 2627 False 4854.0 4854 100.000 1 2628 1 chr3A.!!$F1 2627
1 TraesCS3A01G538400 chr3D 613746759 613749444 2685 False 361.4 584 86.775 3 2605 5 chr3D.!!$F1 2602
2 TraesCS3A01G538400 chr3B 822983101 822984919 1818 False 413.0 547 85.470 3 1634 3 chr3B.!!$F1 1631

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
938 1122 0.198696 TCCTTCCCTTCCCTTCCCTT 59.801 55.0 0.0 0.0 0.0 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2019 2456 0.032017 CCCTGCCCCACTCTACTACT 60.032 60.0 0.0 0.0 0.0 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
335 336 1.026182 TCATGGACAACCTGATGCGC 61.026 55.000 0.00 0.00 37.04 6.09
341 342 2.125512 AACCTGATGCGCGAGGAC 60.126 61.111 22.70 2.63 33.16 3.85
398 402 2.308769 CGAGCTGCGCTGATCCATC 61.309 63.158 23.97 9.57 39.88 3.51
399 403 1.960250 GAGCTGCGCTGATCCATCC 60.960 63.158 20.30 0.00 39.88 3.51
400 404 2.976903 GCTGCGCTGATCCATCCC 60.977 66.667 19.32 0.00 0.00 3.85
401 405 2.827423 CTGCGCTGATCCATCCCT 59.173 61.111 9.73 0.00 0.00 4.20
403 407 0.612229 CTGCGCTGATCCATCCCTAT 59.388 55.000 9.73 0.00 0.00 2.57
418 422 1.614317 CCCTATGGCGGATTGGATTCC 60.614 57.143 0.00 0.00 0.00 3.01
427 431 3.926527 GCGGATTGGATTCCTTTCAAAAC 59.073 43.478 3.95 0.00 33.30 2.43
435 439 6.805713 TGGATTCCTTTCAAAACTGAAACTC 58.194 36.000 3.95 0.00 34.51 3.01
436 440 6.379703 TGGATTCCTTTCAAAACTGAAACTCA 59.620 34.615 3.95 0.00 34.51 3.41
437 441 7.093552 TGGATTCCTTTCAAAACTGAAACTCAA 60.094 33.333 3.95 0.00 34.51 3.02
438 442 7.763985 GGATTCCTTTCAAAACTGAAACTCAAA 59.236 33.333 0.00 0.00 34.51 2.69
439 443 9.317936 GATTCCTTTCAAAACTGAAACTCAAAT 57.682 29.630 0.00 0.00 34.51 2.32
466 483 4.553330 ATTTATTATGTCTCGCCGGGAT 57.447 40.909 2.18 0.00 0.00 3.85
467 484 3.587797 TTATTATGTCTCGCCGGGATC 57.412 47.619 2.18 0.00 0.00 3.36
468 485 0.243907 ATTATGTCTCGCCGGGATCG 59.756 55.000 2.18 0.00 0.00 3.69
469 486 0.820482 TTATGTCTCGCCGGGATCGA 60.820 55.000 2.18 2.46 39.00 3.59
482 503 1.810755 GGGATCGAGTTTTGTTCCCAC 59.189 52.381 12.23 0.00 42.55 4.61
484 505 3.081804 GGATCGAGTTTTGTTCCCACAT 58.918 45.455 0.00 0.00 31.06 3.21
490 511 5.105716 TCGAGTTTTGTTCCCACATTTTTGA 60.106 36.000 0.00 0.00 31.06 2.69
491 512 5.752955 CGAGTTTTGTTCCCACATTTTTGAT 59.247 36.000 0.00 0.00 31.06 2.57
492 513 6.257630 CGAGTTTTGTTCCCACATTTTTGATT 59.742 34.615 0.00 0.00 31.06 2.57
493 514 7.319142 AGTTTTGTTCCCACATTTTTGATTG 57.681 32.000 0.00 0.00 31.06 2.67
494 515 7.108847 AGTTTTGTTCCCACATTTTTGATTGA 58.891 30.769 0.00 0.00 31.06 2.57
510 531 5.952526 TGATTGATTGATGATGATTCGGG 57.047 39.130 0.00 0.00 0.00 5.14
512 533 5.471116 TGATTGATTGATGATGATTCGGGAC 59.529 40.000 0.00 0.00 0.00 4.46
517 538 5.551305 TTGATGATGATTCGGGACTGTAT 57.449 39.130 0.00 0.00 0.00 2.29
520 541 7.061566 TGATGATGATTCGGGACTGTATAAA 57.938 36.000 0.00 0.00 0.00 1.40
521 542 6.929049 TGATGATGATTCGGGACTGTATAAAC 59.071 38.462 0.00 0.00 0.00 2.01
522 543 6.479972 TGATGATTCGGGACTGTATAAACT 57.520 37.500 0.00 0.00 0.00 2.66
524 545 8.014070 TGATGATTCGGGACTGTATAAACTAA 57.986 34.615 0.00 0.00 0.00 2.24
525 546 8.141909 TGATGATTCGGGACTGTATAAACTAAG 58.858 37.037 0.00 0.00 0.00 2.18
526 547 7.414222 TGATTCGGGACTGTATAAACTAAGT 57.586 36.000 0.00 0.00 0.00 2.24
527 548 8.523915 TGATTCGGGACTGTATAAACTAAGTA 57.476 34.615 0.00 0.00 0.00 2.24
528 549 8.970020 TGATTCGGGACTGTATAAACTAAGTAA 58.030 33.333 0.00 0.00 0.00 2.24
530 551 7.944729 TCGGGACTGTATAAACTAAGTAAGT 57.055 36.000 0.00 0.00 41.49 2.24
531 552 7.765307 TCGGGACTGTATAAACTAAGTAAGTG 58.235 38.462 0.00 0.00 38.88 3.16
534 555 9.530633 GGGACTGTATAAACTAAGTAAGTGATG 57.469 37.037 0.00 0.00 38.88 3.07
553 605 4.570369 TGATGTAGACACACACACACAAAG 59.430 41.667 0.00 0.00 37.54 2.77
570 622 6.421801 CACACAAAGAAAGATTGATTTGGTCC 59.578 38.462 0.00 0.00 37.04 4.46
661 814 1.156736 ACAGAAAGCGTTGAATCGGG 58.843 50.000 0.00 0.00 0.00 5.14
672 832 1.001393 GAATCGGGTGGGCTTTGGA 60.001 57.895 0.00 0.00 0.00 3.53
683 843 3.204827 CTTTGGATGGGCCGAGCG 61.205 66.667 0.00 0.00 40.66 5.03
709 869 3.005791 GGCAGCTTGGTAAATTCACAGTT 59.994 43.478 0.00 0.00 0.00 3.16
710 870 4.229876 GCAGCTTGGTAAATTCACAGTTC 58.770 43.478 0.00 0.00 0.00 3.01
718 879 2.851263 AATTCACAGTTCGGGCAGTA 57.149 45.000 0.00 0.00 0.00 2.74
725 886 2.204029 TTCGGGCAGTAGGGGGTT 60.204 61.111 0.00 0.00 0.00 4.11
744 905 2.178235 GCGATTAGGGTTCCCACGC 61.178 63.158 18.54 18.54 38.03 5.34
745 906 1.523032 CGATTAGGGTTCCCACGCC 60.523 63.158 10.73 0.00 36.49 5.68
746 907 1.153025 GATTAGGGTTCCCACGCCC 60.153 63.158 10.73 0.00 45.16 6.13
747 908 2.619941 GATTAGGGTTCCCACGCCCC 62.620 65.000 10.73 0.00 45.95 5.80
786 947 3.334272 AAAACAGACGCCTTTCTTTCG 57.666 42.857 0.00 0.00 0.00 3.46
788 949 0.531974 ACAGACGCCTTTCTTTCGCA 60.532 50.000 0.00 0.00 0.00 5.10
852 1030 1.736491 AAACCCAAACCCCTCCCTCC 61.736 60.000 0.00 0.00 0.00 4.30
853 1031 2.534272 CCCAAACCCCTCCCTCCA 60.534 66.667 0.00 0.00 0.00 3.86
855 1033 1.518431 CCCAAACCCCTCCCTCCATT 61.518 60.000 0.00 0.00 0.00 3.16
857 1035 0.394352 CAAACCCCTCCCTCCATTCG 60.394 60.000 0.00 0.00 0.00 3.34
858 1036 0.549169 AAACCCCTCCCTCCATTCGA 60.549 55.000 0.00 0.00 0.00 3.71
859 1037 0.549169 AACCCCTCCCTCCATTCGAA 60.549 55.000 0.00 0.00 0.00 3.71
861 1039 1.527370 CCCTCCCTCCATTCGAACC 59.473 63.158 0.00 0.00 0.00 3.62
862 1040 1.527370 CCTCCCTCCATTCGAACCC 59.473 63.158 0.00 0.00 0.00 4.11
863 1041 1.271840 CCTCCCTCCATTCGAACCCA 61.272 60.000 0.00 0.00 0.00 4.51
901 1085 1.832411 GCCCGCGGAATCGAATCTTC 61.832 60.000 30.73 0.00 39.00 2.87
910 1094 2.109181 CGAATCTTCGCCCCCTCC 59.891 66.667 0.00 0.00 44.26 4.30
911 1095 2.511403 GAATCTTCGCCCCCTCCC 59.489 66.667 0.00 0.00 0.00 4.30
912 1096 3.462199 GAATCTTCGCCCCCTCCCG 62.462 68.421 0.00 0.00 0.00 5.14
922 1106 4.806339 CCCTCCCGCCTTCCTCCT 62.806 72.222 0.00 0.00 0.00 3.69
923 1107 2.689034 CCTCCCGCCTTCCTCCTT 60.689 66.667 0.00 0.00 0.00 3.36
924 1108 2.736826 CCTCCCGCCTTCCTCCTTC 61.737 68.421 0.00 0.00 0.00 3.46
925 1109 2.687566 TCCCGCCTTCCTCCTTCC 60.688 66.667 0.00 0.00 0.00 3.46
926 1110 3.798511 CCCGCCTTCCTCCTTCCC 61.799 72.222 0.00 0.00 0.00 3.97
927 1111 2.689034 CCGCCTTCCTCCTTCCCT 60.689 66.667 0.00 0.00 0.00 4.20
928 1112 2.301738 CCGCCTTCCTCCTTCCCTT 61.302 63.158 0.00 0.00 0.00 3.95
929 1113 1.222113 CGCCTTCCTCCTTCCCTTC 59.778 63.158 0.00 0.00 0.00 3.46
930 1114 1.610327 GCCTTCCTCCTTCCCTTCC 59.390 63.158 0.00 0.00 0.00 3.46
931 1115 1.927569 GCCTTCCTCCTTCCCTTCCC 61.928 65.000 0.00 0.00 0.00 3.97
932 1116 0.253394 CCTTCCTCCTTCCCTTCCCT 60.253 60.000 0.00 0.00 0.00 4.20
933 1117 1.675007 CTTCCTCCTTCCCTTCCCTT 58.325 55.000 0.00 0.00 0.00 3.95
934 1118 1.562008 CTTCCTCCTTCCCTTCCCTTC 59.438 57.143 0.00 0.00 0.00 3.46
935 1119 0.253207 TCCTCCTTCCCTTCCCTTCC 60.253 60.000 0.00 0.00 0.00 3.46
936 1120 1.282653 CCTCCTTCCCTTCCCTTCCC 61.283 65.000 0.00 0.00 0.00 3.97
937 1121 0.253394 CTCCTTCCCTTCCCTTCCCT 60.253 60.000 0.00 0.00 0.00 4.20
938 1122 0.198696 TCCTTCCCTTCCCTTCCCTT 59.801 55.000 0.00 0.00 0.00 3.95
939 1123 0.626382 CCTTCCCTTCCCTTCCCTTC 59.374 60.000 0.00 0.00 0.00 3.46
940 1124 0.626382 CTTCCCTTCCCTTCCCTTCC 59.374 60.000 0.00 0.00 0.00 3.46
941 1125 0.849540 TTCCCTTCCCTTCCCTTCCC 60.850 60.000 0.00 0.00 0.00 3.97
970 1158 3.378399 TTCCCCGCGCGATCAATCA 62.378 57.895 34.63 5.01 0.00 2.57
984 1196 1.227674 AATCAAGCGATCGGAGCCC 60.228 57.895 18.30 0.00 34.64 5.19
985 1197 1.690219 AATCAAGCGATCGGAGCCCT 61.690 55.000 18.30 1.35 34.64 5.19
986 1198 2.093537 ATCAAGCGATCGGAGCCCTC 62.094 60.000 18.30 0.00 34.64 4.30
1024 1269 3.917760 CGGCGGAGATGGAGTCCC 61.918 72.222 6.74 0.00 0.00 4.46
1030 1275 1.573108 GGAGATGGAGTCCCACAAGA 58.427 55.000 6.74 0.00 46.98 3.02
1032 1277 2.158842 GGAGATGGAGTCCCACAAGATG 60.159 54.545 6.74 0.00 46.98 2.90
1033 1278 1.842562 AGATGGAGTCCCACAAGATGG 59.157 52.381 6.74 0.00 46.98 3.51
1069 1314 3.531207 CGGATCCTGAGGAGCGCA 61.531 66.667 11.04 0.00 39.27 6.09
1190 1438 5.730550 ACTTGTTGTTTTCTTTTCCCCTTC 58.269 37.500 0.00 0.00 0.00 3.46
1192 1440 3.131400 TGTTGTTTTCTTTTCCCCTTCCG 59.869 43.478 0.00 0.00 0.00 4.30
1193 1441 1.684450 TGTTTTCTTTTCCCCTTCCGC 59.316 47.619 0.00 0.00 0.00 5.54
1194 1442 1.961394 GTTTTCTTTTCCCCTTCCGCT 59.039 47.619 0.00 0.00 0.00 5.52
1195 1443 1.616159 TTTCTTTTCCCCTTCCGCTG 58.384 50.000 0.00 0.00 0.00 5.18
1196 1444 0.476771 TTCTTTTCCCCTTCCGCTGT 59.523 50.000 0.00 0.00 0.00 4.40
1197 1445 0.036306 TCTTTTCCCCTTCCGCTGTC 59.964 55.000 0.00 0.00 0.00 3.51
1198 1446 0.960861 CTTTTCCCCTTCCGCTGTCC 60.961 60.000 0.00 0.00 0.00 4.02
1199 1447 2.741486 TTTTCCCCTTCCGCTGTCCG 62.741 60.000 0.00 0.00 0.00 4.79
1211 1459 1.880340 CTGTCCGGCTTCGATCTGC 60.880 63.158 0.00 0.00 35.61 4.26
1212 1460 2.290122 CTGTCCGGCTTCGATCTGCT 62.290 60.000 0.00 0.00 35.61 4.24
1220 1468 1.554392 CTTCGATCTGCTCTGTTCCG 58.446 55.000 0.00 0.00 0.00 4.30
1227 1475 0.526524 CTGCTCTGTTCCGGTCGATC 60.527 60.000 0.00 0.00 0.00 3.69
1232 1534 0.747255 CTGTTCCGGTCGATCCATCT 59.253 55.000 0.00 0.00 35.57 2.90
1376 1678 2.722201 AAGAGGGACGACGCCATCC 61.722 63.158 15.84 6.85 39.48 3.51
1383 1685 0.387929 GACGACGCCATCCTATCCAA 59.612 55.000 0.00 0.00 0.00 3.53
1384 1686 0.389391 ACGACGCCATCCTATCCAAG 59.611 55.000 0.00 0.00 0.00 3.61
1387 1689 4.386413 GCCATCCTATCCAAGGCG 57.614 61.111 0.00 0.00 46.10 5.52
1388 1690 1.302832 GCCATCCTATCCAAGGCGG 60.303 63.158 0.00 0.00 46.10 6.13
1426 1758 1.231928 GGAGGAGGAGGAGGAGGAC 59.768 68.421 0.00 0.00 0.00 3.85
1427 1759 1.585651 GGAGGAGGAGGAGGAGGACA 61.586 65.000 0.00 0.00 0.00 4.02
1444 1809 1.067916 CAACAAGGCCAGCACCAAC 59.932 57.895 5.01 0.00 0.00 3.77
1449 1814 0.178953 AAGGCCAGCACCAACAAGAT 60.179 50.000 5.01 0.00 0.00 2.40
1456 1821 2.227388 CAGCACCAACAAGATCAAGACC 59.773 50.000 0.00 0.00 0.00 3.85
1458 1823 2.622942 GCACCAACAAGATCAAGACCAA 59.377 45.455 0.00 0.00 0.00 3.67
1465 1830 3.322254 ACAAGATCAAGACCAAGACGACT 59.678 43.478 0.00 0.00 0.00 4.18
1468 1833 4.337145 AGATCAAGACCAAGACGACTACT 58.663 43.478 0.00 0.00 0.00 2.57
1600 1971 1.070445 CGCCATCCTCCTCATGTCC 59.930 63.158 0.00 0.00 0.00 4.02
1634 2005 5.250235 CGTAATATACGCCTGATCCATCT 57.750 43.478 0.00 0.00 45.81 2.90
1635 2006 5.274718 CGTAATATACGCCTGATCCATCTC 58.725 45.833 0.00 0.00 45.81 2.75
1636 2007 4.744795 AATATACGCCTGATCCATCTCC 57.255 45.455 0.00 0.00 0.00 3.71
1637 2008 2.317371 ATACGCCTGATCCATCTCCT 57.683 50.000 0.00 0.00 0.00 3.69
1638 2009 2.088104 TACGCCTGATCCATCTCCTT 57.912 50.000 0.00 0.00 0.00 3.36
1639 2010 0.467384 ACGCCTGATCCATCTCCTTG 59.533 55.000 0.00 0.00 0.00 3.61
1640 2011 0.250209 CGCCTGATCCATCTCCTTGG 60.250 60.000 0.00 0.00 38.18 3.61
1646 2017 3.635099 TCCATCTCCTTGGATCGGT 57.365 52.632 0.00 0.00 40.90 4.69
1647 2018 1.414158 TCCATCTCCTTGGATCGGTC 58.586 55.000 0.00 0.00 40.90 4.79
1650 2021 0.031111 ATCTCCTTGGATCGGTCCCA 60.031 55.000 13.41 0.00 44.41 4.37
1651 2022 0.687757 TCTCCTTGGATCGGTCCCAG 60.688 60.000 13.41 10.96 44.41 4.45
1652 2023 0.978146 CTCCTTGGATCGGTCCCAGT 60.978 60.000 13.41 0.00 44.41 4.00
1653 2024 0.976073 TCCTTGGATCGGTCCCAGTC 60.976 60.000 13.41 0.00 44.41 3.51
1654 2025 1.141881 CTTGGATCGGTCCCAGTCG 59.858 63.158 13.41 0.00 44.41 4.18
1655 2026 2.298158 CTTGGATCGGTCCCAGTCGG 62.298 65.000 13.41 0.00 44.41 4.79
1656 2027 2.441532 GGATCGGTCCCAGTCGGA 60.442 66.667 2.19 0.00 38.69 4.55
1657 2028 2.056223 GGATCGGTCCCAGTCGGAA 61.056 63.158 2.19 0.00 44.47 4.30
1658 2029 1.141234 GATCGGTCCCAGTCGGAAC 59.859 63.158 0.00 0.00 46.07 3.62
1667 2038 2.076863 CCCAGTCGGAACAAGATGAAC 58.923 52.381 0.00 0.00 0.00 3.18
1687 2058 1.955778 CATGAAGAGGTGTTGTTGGCA 59.044 47.619 0.00 0.00 0.00 4.92
1688 2059 2.363306 TGAAGAGGTGTTGTTGGCAT 57.637 45.000 0.00 0.00 0.00 4.40
1689 2060 2.229792 TGAAGAGGTGTTGTTGGCATC 58.770 47.619 0.00 0.00 0.00 3.91
1690 2061 1.541588 GAAGAGGTGTTGTTGGCATCC 59.458 52.381 0.00 0.00 0.00 3.51
1691 2062 0.478072 AGAGGTGTTGTTGGCATCCA 59.522 50.000 0.00 0.00 0.00 3.41
1692 2063 1.076024 AGAGGTGTTGTTGGCATCCAT 59.924 47.619 0.00 0.00 31.53 3.41
1693 2064 1.474077 GAGGTGTTGTTGGCATCCATC 59.526 52.381 0.00 0.00 31.53 3.51
1694 2065 1.203038 AGGTGTTGTTGGCATCCATCA 60.203 47.619 0.00 0.00 31.53 3.07
1695 2066 1.617850 GGTGTTGTTGGCATCCATCAA 59.382 47.619 5.50 5.50 39.84 2.57
1742 2124 8.175925 TGCTATGCTATATGATGATCTAGTCC 57.824 38.462 0.00 0.00 0.00 3.85
1766 2148 2.366640 TCAGCAGCCTACCTACCTAG 57.633 55.000 0.00 0.00 0.00 3.02
1770 2152 2.074729 CAGCCTACCTACCTAGCTGT 57.925 55.000 0.00 0.00 44.59 4.40
1771 2153 1.683917 CAGCCTACCTACCTAGCTGTG 59.316 57.143 0.00 0.00 44.59 3.66
1772 2154 1.288335 AGCCTACCTACCTAGCTGTGT 59.712 52.381 0.00 0.00 31.23 3.72
1773 2155 1.409427 GCCTACCTACCTAGCTGTGTG 59.591 57.143 0.00 0.00 0.00 3.82
1785 2167 0.525761 GCTGTGTGTGTGTTGGTTGT 59.474 50.000 0.00 0.00 0.00 3.32
1791 2173 0.529833 TGTGTGTTGGTTGTTGCTGG 59.470 50.000 0.00 0.00 0.00 4.85
1802 2184 1.081442 GTTGCTGGCTTACCGTTGC 60.081 57.895 0.00 0.00 39.70 4.17
1809 2191 1.877443 TGGCTTACCGTTGCTTCTTTC 59.123 47.619 0.00 0.00 39.70 2.62
1813 2195 3.541711 CTTACCGTTGCTTCTTTCGTTG 58.458 45.455 0.00 0.00 0.00 4.10
1835 2217 5.761165 GCTAGCTAGCTAGTGAGTACTTT 57.239 43.478 39.05 10.93 45.67 2.66
1836 2218 5.516090 GCTAGCTAGCTAGTGAGTACTTTG 58.484 45.833 39.05 19.81 45.67 2.77
1837 2219 5.297278 GCTAGCTAGCTAGTGAGTACTTTGA 59.703 44.000 39.05 12.66 45.67 2.69
1838 2220 6.016610 GCTAGCTAGCTAGTGAGTACTTTGAT 60.017 42.308 39.05 9.56 45.67 2.57
1839 2221 6.385649 AGCTAGCTAGTGAGTACTTTGATC 57.614 41.667 17.69 0.26 38.36 2.92
1856 2238 1.678101 GATCCCCTGTGCTGTTAATGC 59.322 52.381 0.00 0.00 0.00 3.56
1862 2244 2.430465 CTGTGCTGTTAATGCCTGTCT 58.570 47.619 1.82 0.00 0.00 3.41
1863 2245 2.153645 TGTGCTGTTAATGCCTGTCTG 58.846 47.619 1.82 0.00 0.00 3.51
1864 2246 2.154462 GTGCTGTTAATGCCTGTCTGT 58.846 47.619 1.82 0.00 0.00 3.41
1865 2247 2.160417 GTGCTGTTAATGCCTGTCTGTC 59.840 50.000 1.82 0.00 0.00 3.51
1883 2265 2.420722 TGTCCGTCTGTTTGTTTGTTCC 59.579 45.455 0.00 0.00 0.00 3.62
1886 2268 3.127895 TCCGTCTGTTTGTTTGTTCCAAG 59.872 43.478 0.00 0.00 0.00 3.61
1894 2276 7.554835 TCTGTTTGTTTGTTCCAAGTATGTACT 59.445 33.333 0.00 0.00 38.39 2.73
1908 2290 8.470805 CCAAGTATGTACTGTCTGACTTAATCT 58.529 37.037 9.51 0.00 36.50 2.40
1909 2291 9.295214 CAAGTATGTACTGTCTGACTTAATCTG 57.705 37.037 9.51 0.00 36.50 2.90
1910 2292 7.484975 AGTATGTACTGTCTGACTTAATCTGC 58.515 38.462 9.51 0.00 34.72 4.26
1911 2293 5.722021 TGTACTGTCTGACTTAATCTGCA 57.278 39.130 9.51 0.00 0.00 4.41
1912 2294 6.096673 TGTACTGTCTGACTTAATCTGCAA 57.903 37.500 9.51 0.00 0.00 4.08
1913 2295 6.701340 TGTACTGTCTGACTTAATCTGCAAT 58.299 36.000 9.51 0.00 0.00 3.56
1914 2296 6.591448 TGTACTGTCTGACTTAATCTGCAATG 59.409 38.462 9.51 0.00 0.00 2.82
1915 2297 4.394300 ACTGTCTGACTTAATCTGCAATGC 59.606 41.667 9.51 0.00 0.00 3.56
1916 2298 4.325972 TGTCTGACTTAATCTGCAATGCA 58.674 39.130 7.99 7.99 36.92 3.96
1917 2299 4.761227 TGTCTGACTTAATCTGCAATGCAA 59.239 37.500 9.92 0.73 38.41 4.08
1937 2319 4.052608 CAATGCAATGCAAAGTGACAAGA 58.947 39.130 13.45 0.00 43.62 3.02
1962 2399 6.299141 ACAAGTCAAGTCATGTTAATCCTGT 58.701 36.000 0.00 0.00 0.00 4.00
1980 2417 3.681897 CCTGTCTAGTGTTGCTGTCATTC 59.318 47.826 0.00 0.00 0.00 2.67
1984 2421 5.926542 TGTCTAGTGTTGCTGTCATTCTTAC 59.073 40.000 0.00 0.00 0.00 2.34
1987 2424 7.171678 GTCTAGTGTTGCTGTCATTCTTACTTT 59.828 37.037 0.00 0.00 0.00 2.66
1988 2425 6.305693 AGTGTTGCTGTCATTCTTACTTTC 57.694 37.500 0.00 0.00 0.00 2.62
1991 2428 5.239306 TGTTGCTGTCATTCTTACTTTCCTG 59.761 40.000 0.00 0.00 0.00 3.86
1992 2429 5.227569 TGCTGTCATTCTTACTTTCCTGA 57.772 39.130 0.00 0.00 0.00 3.86
1998 2435 4.697352 TCATTCTTACTTTCCTGAAGCAGC 59.303 41.667 0.00 0.00 39.04 5.25
1999 2436 3.769739 TCTTACTTTCCTGAAGCAGCA 57.230 42.857 0.00 0.00 39.04 4.41
2000 2437 3.668447 TCTTACTTTCCTGAAGCAGCAG 58.332 45.455 0.00 0.00 39.04 4.24
2015 2452 2.439104 GCAGGGAGCAGAGTAGGGG 61.439 68.421 0.00 0.00 44.79 4.79
2018 2455 1.001760 GGGAGCAGAGTAGGGGTGA 59.998 63.158 0.00 0.00 0.00 4.02
2019 2456 0.617820 GGGAGCAGAGTAGGGGTGAA 60.618 60.000 0.00 0.00 0.00 3.18
2020 2457 0.827368 GGAGCAGAGTAGGGGTGAAG 59.173 60.000 0.00 0.00 0.00 3.02
2021 2458 1.562783 GAGCAGAGTAGGGGTGAAGT 58.437 55.000 0.00 0.00 0.00 3.01
2040 2477 1.226104 TAGTAGAGTGGGGCAGGGGA 61.226 60.000 0.00 0.00 0.00 4.81
2058 2496 2.228059 GGATGATGCAAGAGGTGATGG 58.772 52.381 0.00 0.00 0.00 3.51
2059 2497 2.158711 GGATGATGCAAGAGGTGATGGA 60.159 50.000 0.00 0.00 0.00 3.41
2060 2498 3.498121 GGATGATGCAAGAGGTGATGGAT 60.498 47.826 0.00 0.00 0.00 3.41
2061 2499 2.927028 TGATGCAAGAGGTGATGGATG 58.073 47.619 0.00 0.00 0.00 3.51
2062 2500 2.506644 TGATGCAAGAGGTGATGGATGA 59.493 45.455 0.00 0.00 0.00 2.92
2063 2501 3.137728 TGATGCAAGAGGTGATGGATGAT 59.862 43.478 0.00 0.00 0.00 2.45
2064 2502 3.204306 TGCAAGAGGTGATGGATGATC 57.796 47.619 0.00 0.00 0.00 2.92
2065 2503 2.506644 TGCAAGAGGTGATGGATGATCA 59.493 45.455 0.00 0.00 38.87 2.92
2076 2514 6.628919 TGATGGATGATCACATTTCATGTC 57.371 37.500 0.00 0.00 42.70 3.06
2077 2515 6.362248 TGATGGATGATCACATTTCATGTCT 58.638 36.000 0.00 0.00 42.70 3.41
2078 2516 6.262273 TGATGGATGATCACATTTCATGTCTG 59.738 38.462 0.00 0.00 42.70 3.51
2081 2519 4.957759 TGATCACATTTCATGTCTGCAG 57.042 40.909 7.63 7.63 42.70 4.41
2085 2523 3.128068 TCACATTTCATGTCTGCAGCATC 59.872 43.478 17.29 8.15 42.70 3.91
2086 2524 2.426024 ACATTTCATGTCTGCAGCATCC 59.574 45.455 17.29 3.72 39.92 3.51
2087 2525 1.089112 TTTCATGTCTGCAGCATCCG 58.911 50.000 17.29 10.03 0.00 4.18
2090 2528 0.098200 CATGTCTGCAGCATCCGTTG 59.902 55.000 17.29 7.26 0.00 4.10
2100 2538 3.951115 CATCCGTTGCATTCCATGG 57.049 52.632 4.97 4.97 0.00 3.66
2101 2539 1.105457 CATCCGTTGCATTCCATGGT 58.895 50.000 12.58 0.00 0.00 3.55
2102 2540 2.296792 CATCCGTTGCATTCCATGGTA 58.703 47.619 12.58 1.50 0.00 3.25
2103 2541 1.745232 TCCGTTGCATTCCATGGTAC 58.255 50.000 12.58 0.31 0.00 3.34
2117 2555 1.050204 TGGTACAGTGTACCACCACC 58.950 55.000 39.55 23.39 42.21 4.61
2118 2556 1.050204 GGTACAGTGTACCACCACCA 58.950 55.000 36.97 0.00 37.53 4.17
2119 2557 1.270465 GGTACAGTGTACCACCACCAC 60.270 57.143 36.97 14.89 37.53 4.16
2120 2558 1.690352 GTACAGTGTACCACCACCACT 59.310 52.381 20.77 0.00 39.93 4.00
2121 2559 3.305709 CAGTGTACCACCACCACTG 57.694 57.895 4.81 4.81 46.93 3.66
2122 2560 0.884704 CAGTGTACCACCACCACTGC 60.885 60.000 6.13 0.00 46.53 4.40
2124 2562 2.358247 GTACCACCACCACTGCGG 60.358 66.667 0.00 0.00 42.50 5.69
2125 2563 4.323477 TACCACCACCACTGCGGC 62.323 66.667 0.00 0.00 39.03 6.53
2128 2566 2.046411 CACCACCACTGCGGCATA 60.046 61.111 1.75 0.00 39.03 3.14
2129 2567 1.673993 CACCACCACTGCGGCATAA 60.674 57.895 1.75 0.00 39.03 1.90
2130 2568 1.377202 ACCACCACTGCGGCATAAG 60.377 57.895 1.75 0.00 39.03 1.73
2131 2569 1.377202 CCACCACTGCGGCATAAGT 60.377 57.895 1.75 0.00 39.03 2.24
2132 2570 0.960364 CCACCACTGCGGCATAAGTT 60.960 55.000 1.75 0.00 39.03 2.66
2133 2571 1.677518 CCACCACTGCGGCATAAGTTA 60.678 52.381 1.75 0.00 39.03 2.24
2136 2574 2.290071 ACCACTGCGGCATAAGTTAGTT 60.290 45.455 1.75 0.00 39.03 2.24
2137 2575 3.055675 ACCACTGCGGCATAAGTTAGTTA 60.056 43.478 1.75 0.00 39.03 2.24
2138 2576 3.555956 CCACTGCGGCATAAGTTAGTTAG 59.444 47.826 1.75 0.00 0.00 2.34
2140 2578 4.630069 CACTGCGGCATAAGTTAGTTAGTT 59.370 41.667 1.75 0.00 0.00 2.24
2142 2580 6.019801 CACTGCGGCATAAGTTAGTTAGTTAG 60.020 42.308 1.75 0.00 0.00 2.34
2144 2582 6.400568 TGCGGCATAAGTTAGTTAGTTAGTT 58.599 36.000 0.00 0.00 0.00 2.24
2145 2583 7.546358 TGCGGCATAAGTTAGTTAGTTAGTTA 58.454 34.615 0.00 0.00 0.00 2.24
2175 2675 7.363793 CCCAAGTTGGAAAGAAAGAAAGAAAGA 60.364 37.037 24.06 0.00 40.96 2.52
2177 2677 9.423061 CAAGTTGGAAAGAAAGAAAGAAAGAAA 57.577 29.630 0.00 0.00 0.00 2.52
2180 2680 9.639601 GTTGGAAAGAAAGAAAGAAAGAAAGAA 57.360 29.630 0.00 0.00 0.00 2.52
2182 2682 9.860898 TGGAAAGAAAGAAAGAAAGAAAGAAAG 57.139 29.630 0.00 0.00 0.00 2.62
2204 2704 9.307121 GAAAGAAAGAAAGAAAGAAAGAAAGGG 57.693 33.333 0.00 0.00 0.00 3.95
2205 2705 8.595362 AAGAAAGAAAGAAAGAAAGAAAGGGA 57.405 30.769 0.00 0.00 0.00 4.20
2225 2725 0.538584 AGTCAGCCATCGATGCTTCA 59.461 50.000 20.25 6.95 36.81 3.02
2226 2726 0.654683 GTCAGCCATCGATGCTTCAC 59.345 55.000 20.25 13.97 36.81 3.18
2246 2770 1.219522 GCACCAGCAAGCAAGCAAAG 61.220 55.000 3.19 0.00 41.58 2.77
2247 2771 0.599204 CACCAGCAAGCAAGCAAAGG 60.599 55.000 3.19 4.51 36.85 3.11
2249 2773 0.390124 CCAGCAAGCAAGCAAAGGAA 59.610 50.000 3.19 0.00 36.85 3.36
2250 2774 1.604693 CCAGCAAGCAAGCAAAGGAAG 60.605 52.381 3.19 0.00 36.85 3.46
2251 2775 0.677842 AGCAAGCAAGCAAAGGAAGG 59.322 50.000 3.19 0.00 36.85 3.46
2253 2777 1.603931 GCAAGCAAGCAAAGGAAGGAC 60.604 52.381 0.00 0.00 0.00 3.85
2254 2778 1.000171 CAAGCAAGCAAAGGAAGGACC 60.000 52.381 0.00 0.00 39.35 4.46
2256 2780 0.600057 GCAAGCAAAGGAAGGACCAG 59.400 55.000 0.00 0.00 42.04 4.00
2257 2781 0.600057 CAAGCAAAGGAAGGACCAGC 59.400 55.000 0.00 0.00 42.04 4.85
2258 2782 0.185901 AAGCAAAGGAAGGACCAGCA 59.814 50.000 0.00 0.00 42.04 4.41
2259 2783 0.251077 AGCAAAGGAAGGACCAGCAG 60.251 55.000 0.00 0.00 42.04 4.24
2260 2784 1.246737 GCAAAGGAAGGACCAGCAGG 61.247 60.000 0.00 0.00 42.04 4.85
2295 2824 4.797743 TCTAGCTAGAAATGCTGGAGAGA 58.202 43.478 21.26 0.00 41.82 3.10
2296 2825 4.826733 TCTAGCTAGAAATGCTGGAGAGAG 59.173 45.833 21.26 0.00 41.82 3.20
2297 2826 3.641046 AGCTAGAAATGCTGGAGAGAGA 58.359 45.455 0.00 0.00 39.56 3.10
2298 2827 3.638160 AGCTAGAAATGCTGGAGAGAGAG 59.362 47.826 0.00 0.00 39.56 3.20
2299 2828 3.636300 GCTAGAAATGCTGGAGAGAGAGA 59.364 47.826 0.00 0.00 0.00 3.10
2300 2829 4.261741 GCTAGAAATGCTGGAGAGAGAGAG 60.262 50.000 0.00 0.00 0.00 3.20
2301 2830 3.979911 AGAAATGCTGGAGAGAGAGAGA 58.020 45.455 0.00 0.00 0.00 3.10
2302 2831 3.956199 AGAAATGCTGGAGAGAGAGAGAG 59.044 47.826 0.00 0.00 0.00 3.20
2303 2832 3.668141 AATGCTGGAGAGAGAGAGAGA 57.332 47.619 0.00 0.00 0.00 3.10
2304 2833 2.715749 TGCTGGAGAGAGAGAGAGAG 57.284 55.000 0.00 0.00 0.00 3.20
2305 2834 2.195727 TGCTGGAGAGAGAGAGAGAGA 58.804 52.381 0.00 0.00 0.00 3.10
2306 2835 2.171237 TGCTGGAGAGAGAGAGAGAGAG 59.829 54.545 0.00 0.00 0.00 3.20
2307 2836 2.435805 GCTGGAGAGAGAGAGAGAGAGA 59.564 54.545 0.00 0.00 0.00 3.10
2308 2837 3.494048 GCTGGAGAGAGAGAGAGAGAGAG 60.494 56.522 0.00 0.00 0.00 3.20
2309 2838 3.963374 CTGGAGAGAGAGAGAGAGAGAGA 59.037 52.174 0.00 0.00 0.00 3.10
2310 2839 3.963374 TGGAGAGAGAGAGAGAGAGAGAG 59.037 52.174 0.00 0.00 0.00 3.20
2311 2840 4.219115 GGAGAGAGAGAGAGAGAGAGAGA 58.781 52.174 0.00 0.00 0.00 3.10
2312 2841 4.280677 GGAGAGAGAGAGAGAGAGAGAGAG 59.719 54.167 0.00 0.00 0.00 3.20
2313 2842 5.136068 AGAGAGAGAGAGAGAGAGAGAGA 57.864 47.826 0.00 0.00 0.00 3.10
2314 2843 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2315 2844 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2316 2845 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2317 2846 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2318 2847 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2319 2848 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2320 2849 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2321 2850 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2322 2851 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2323 2852 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2324 2853 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2325 2854 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2326 2855 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2327 2856 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2328 2857 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2329 2858 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2330 2859 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2331 2860 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2332 2861 5.139727 AGAGAGAGAGAGAGAGAGAGAGAG 58.860 50.000 0.00 0.00 0.00 3.20
2333 2862 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2334 2863 5.714863 AGAGAGAGAGAGAGAGAGAGAGAT 58.285 45.833 0.00 0.00 0.00 2.75
2341 2870 4.458397 AGAGAGAGAGAGAGATTGCAGAG 58.542 47.826 0.00 0.00 0.00 3.35
2384 2913 3.412386 AGAATGTTTCTTCTTGGGGACG 58.588 45.455 0.00 0.00 36.36 4.79
2385 2914 2.200373 ATGTTTCTTCTTGGGGACGG 57.800 50.000 0.00 0.00 0.00 4.79
2386 2915 0.109723 TGTTTCTTCTTGGGGACGGG 59.890 55.000 0.00 0.00 0.00 5.28
2387 2916 0.399075 GTTTCTTCTTGGGGACGGGA 59.601 55.000 0.00 0.00 0.00 5.14
2410 2939 2.194326 GGGAGCTTGCTCATCCCC 59.806 66.667 21.97 12.19 46.03 4.81
2411 2940 2.194326 GGAGCTTGCTCATCCCCC 59.806 66.667 21.97 2.83 0.00 5.40
2412 2941 2.381941 GGAGCTTGCTCATCCCCCT 61.382 63.158 21.97 0.00 0.00 4.79
2413 2942 1.148048 GAGCTTGCTCATCCCCCTC 59.852 63.158 16.71 0.00 0.00 4.30
2414 2943 2.194326 GCTTGCTCATCCCCCTCC 59.806 66.667 0.00 0.00 0.00 4.30
2416 2945 1.695597 CTTGCTCATCCCCCTCCCT 60.696 63.158 0.00 0.00 0.00 4.20
2417 2946 1.992519 CTTGCTCATCCCCCTCCCTG 61.993 65.000 0.00 0.00 0.00 4.45
2418 2947 3.883549 GCTCATCCCCCTCCCTGC 61.884 72.222 0.00 0.00 0.00 4.85
2419 2948 2.367377 CTCATCCCCCTCCCTGCA 60.367 66.667 0.00 0.00 0.00 4.41
2420 2949 1.773391 CTCATCCCCCTCCCTGCAT 60.773 63.158 0.00 0.00 0.00 3.96
2421 2950 1.771746 TCATCCCCCTCCCTGCATC 60.772 63.158 0.00 0.00 0.00 3.91
2422 2951 2.451294 ATCCCCCTCCCTGCATCC 60.451 66.667 0.00 0.00 0.00 3.51
2423 2952 3.367604 ATCCCCCTCCCTGCATCCA 62.368 63.158 0.00 0.00 0.00 3.41
2424 2953 2.666335 ATCCCCCTCCCTGCATCCAT 62.666 60.000 0.00 0.00 0.00 3.41
2425 2954 2.397902 CCCCCTCCCTGCATCCATT 61.398 63.158 0.00 0.00 0.00 3.16
2426 2955 1.622499 CCCCTCCCTGCATCCATTT 59.378 57.895 0.00 0.00 0.00 2.32
2427 2956 0.468771 CCCCTCCCTGCATCCATTTC 60.469 60.000 0.00 0.00 0.00 2.17
2428 2957 0.468771 CCCTCCCTGCATCCATTTCC 60.469 60.000 0.00 0.00 0.00 3.13
2429 2958 0.259647 CCTCCCTGCATCCATTTCCA 59.740 55.000 0.00 0.00 0.00 3.53
2430 2959 1.133262 CCTCCCTGCATCCATTTCCAT 60.133 52.381 0.00 0.00 0.00 3.41
2431 2960 2.674420 CTCCCTGCATCCATTTCCATT 58.326 47.619 0.00 0.00 0.00 3.16
2432 2961 2.626743 CTCCCTGCATCCATTTCCATTC 59.373 50.000 0.00 0.00 0.00 2.67
2433 2962 1.690352 CCCTGCATCCATTTCCATTCC 59.310 52.381 0.00 0.00 0.00 3.01
2434 2963 2.390696 CCTGCATCCATTTCCATTCCA 58.609 47.619 0.00 0.00 0.00 3.53
2435 2964 2.969950 CCTGCATCCATTTCCATTCCAT 59.030 45.455 0.00 0.00 0.00 3.41
2436 2965 4.154176 CCTGCATCCATTTCCATTCCATA 58.846 43.478 0.00 0.00 0.00 2.74
2437 2966 4.021719 CCTGCATCCATTTCCATTCCATAC 60.022 45.833 0.00 0.00 0.00 2.39
2438 2967 4.544683 TGCATCCATTTCCATTCCATACA 58.455 39.130 0.00 0.00 0.00 2.29
2439 2968 5.149239 TGCATCCATTTCCATTCCATACAT 58.851 37.500 0.00 0.00 0.00 2.29
2440 2969 5.011227 TGCATCCATTTCCATTCCATACATG 59.989 40.000 0.00 0.00 0.00 3.21
2441 2970 5.244402 GCATCCATTTCCATTCCATACATGA 59.756 40.000 0.00 0.00 0.00 3.07
2442 2971 6.070995 GCATCCATTTCCATTCCATACATGAT 60.071 38.462 0.00 0.00 0.00 2.45
2443 2972 7.123098 GCATCCATTTCCATTCCATACATGATA 59.877 37.037 0.00 0.00 0.00 2.15
2444 2973 8.464404 CATCCATTTCCATTCCATACATGATAC 58.536 37.037 0.00 0.00 0.00 2.24
2445 2974 7.525165 TCCATTTCCATTCCATACATGATACA 58.475 34.615 0.00 0.00 0.00 2.29
2446 2975 8.172070 TCCATTTCCATTCCATACATGATACAT 58.828 33.333 0.00 0.00 0.00 2.29
2447 2976 9.465199 CCATTTCCATTCCATACATGATACATA 57.535 33.333 0.00 0.00 0.00 2.29
2451 2980 9.671279 TTCCATTCCATACATGATACATACATC 57.329 33.333 0.00 0.00 0.00 3.06
2452 2981 8.824783 TCCATTCCATACATGATACATACATCA 58.175 33.333 0.00 0.00 39.20 3.07
2453 2982 9.452287 CCATTCCATACATGATACATACATCAA 57.548 33.333 0.00 0.00 38.39 2.57
2455 2984 9.676861 ATTCCATACATGATACATACATCAAGG 57.323 33.333 0.00 0.00 38.39 3.61
2456 2985 8.434589 TCCATACATGATACATACATCAAGGA 57.565 34.615 0.00 0.00 38.39 3.36
2457 2986 8.534496 TCCATACATGATACATACATCAAGGAG 58.466 37.037 0.00 0.00 38.39 3.69
2473 3002 0.962855 GGAGAGCCTGGCTTTTGTCC 60.963 60.000 24.26 20.77 39.88 4.02
2482 3011 1.741525 GCTTTTGTCCCAGCAGCAA 59.258 52.632 0.00 0.00 35.95 3.91
2494 3023 0.675633 AGCAGCAACACCAACAATCC 59.324 50.000 0.00 0.00 0.00 3.01
2495 3024 0.319813 GCAGCAACACCAACAATCCC 60.320 55.000 0.00 0.00 0.00 3.85
2496 3025 1.331214 CAGCAACACCAACAATCCCT 58.669 50.000 0.00 0.00 0.00 4.20
2497 3026 1.270550 CAGCAACACCAACAATCCCTC 59.729 52.381 0.00 0.00 0.00 4.30
2498 3027 0.603065 GCAACACCAACAATCCCTCC 59.397 55.000 0.00 0.00 0.00 4.30
2499 3028 1.256812 CAACACCAACAATCCCTCCC 58.743 55.000 0.00 0.00 0.00 4.30
2500 3029 0.114364 AACACCAACAATCCCTCCCC 59.886 55.000 0.00 0.00 0.00 4.81
2501 3030 0.776080 ACACCAACAATCCCTCCCCT 60.776 55.000 0.00 0.00 0.00 4.79
2502 3031 0.034089 CACCAACAATCCCTCCCCTC 60.034 60.000 0.00 0.00 0.00 4.30
2503 3032 0.178831 ACCAACAATCCCTCCCCTCT 60.179 55.000 0.00 0.00 0.00 3.69
2504 3033 1.002857 CCAACAATCCCTCCCCTCTT 58.997 55.000 0.00 0.00 0.00 2.85
2505 3034 1.341383 CCAACAATCCCTCCCCTCTTG 60.341 57.143 0.00 0.00 0.00 3.02
2511 3040 4.294970 ACAATCCCTCCCCTCTTGTTTATT 59.705 41.667 0.00 0.00 0.00 1.40
2523 3052 5.687285 CCTCTTGTTTATTTGTGCACTGTTC 59.313 40.000 19.41 3.05 0.00 3.18
2536 3065 2.165167 CACTGTTCCTGTTGCATCCAT 58.835 47.619 0.00 0.00 0.00 3.41
2549 3078 2.776312 CATCCATGCAGATTCTGTGC 57.224 50.000 14.90 3.40 41.59 4.57
2550 3079 1.337071 CATCCATGCAGATTCTGTGCC 59.663 52.381 14.90 0.00 40.43 5.01
2568 3097 2.203983 TGCCTGCCTTCCTCCTCA 60.204 61.111 0.00 0.00 0.00 3.86
2569 3098 1.617536 TGCCTGCCTTCCTCCTCAT 60.618 57.895 0.00 0.00 0.00 2.90
2570 3099 1.148048 GCCTGCCTTCCTCCTCATC 59.852 63.158 0.00 0.00 0.00 2.92
2573 3102 0.758123 CTGCCTTCCTCCTCATCTCC 59.242 60.000 0.00 0.00 0.00 3.71
2574 3103 0.692419 TGCCTTCCTCCTCATCTCCC 60.692 60.000 0.00 0.00 0.00 4.30
2575 3104 0.399806 GCCTTCCTCCTCATCTCCCT 60.400 60.000 0.00 0.00 0.00 4.20
2576 3105 1.422531 CCTTCCTCCTCATCTCCCTG 58.577 60.000 0.00 0.00 0.00 4.45
2605 3137 2.548480 GCTGTCTGTGAACCCACTTAAC 59.452 50.000 0.00 0.00 43.55 2.01
2606 3138 3.744530 GCTGTCTGTGAACCCACTTAACT 60.745 47.826 0.00 0.00 43.55 2.24
2607 3139 4.451900 CTGTCTGTGAACCCACTTAACTT 58.548 43.478 0.00 0.00 43.55 2.66
2608 3140 4.850680 TGTCTGTGAACCCACTTAACTTT 58.149 39.130 0.00 0.00 43.55 2.66
2609 3141 5.258051 TGTCTGTGAACCCACTTAACTTTT 58.742 37.500 0.00 0.00 43.55 2.27
2610 3142 5.355910 TGTCTGTGAACCCACTTAACTTTTC 59.644 40.000 0.00 0.00 43.55 2.29
2611 3143 5.589050 GTCTGTGAACCCACTTAACTTTTCT 59.411 40.000 0.00 0.00 43.55 2.52
2612 3144 6.095021 GTCTGTGAACCCACTTAACTTTTCTT 59.905 38.462 0.00 0.00 43.55 2.52
2613 3145 6.661805 TCTGTGAACCCACTTAACTTTTCTTT 59.338 34.615 0.00 0.00 43.55 2.52
2614 3146 7.177744 TCTGTGAACCCACTTAACTTTTCTTTT 59.822 33.333 0.00 0.00 43.55 2.27
2615 3147 7.672240 TGTGAACCCACTTAACTTTTCTTTTT 58.328 30.769 0.00 0.00 43.55 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 1.214305 TAGAACTTGGCCTGCCCCAT 61.214 55.000 3.32 0.00 34.21 4.00
16 17 1.850289 TAGAACTTGGCCTGCCCCA 60.850 57.895 3.32 0.00 34.56 4.96
17 18 1.378646 GTAGAACTTGGCCTGCCCC 60.379 63.158 3.32 0.00 34.56 5.80
18 19 0.909623 TAGTAGAACTTGGCCTGCCC 59.090 55.000 3.32 0.00 34.56 5.36
19 20 1.739371 CGTAGTAGAACTTGGCCTGCC 60.739 57.143 3.32 0.00 0.00 4.85
20 21 1.203994 TCGTAGTAGAACTTGGCCTGC 59.796 52.381 3.32 0.00 0.00 4.85
21 22 2.753452 TCTCGTAGTAGAACTTGGCCTG 59.247 50.000 3.32 0.00 0.00 4.85
353 354 0.407918 GGAGGGTGTTGGGGAATGAA 59.592 55.000 0.00 0.00 0.00 2.57
356 357 3.087065 CGGAGGGTGTTGGGGAAT 58.913 61.111 0.00 0.00 0.00 3.01
398 402 1.614317 GGAATCCAATCCGCCATAGGG 60.614 57.143 0.00 0.00 37.18 3.53
399 403 1.352352 AGGAATCCAATCCGCCATAGG 59.648 52.381 0.61 0.00 44.60 2.57
400 404 2.867109 AGGAATCCAATCCGCCATAG 57.133 50.000 0.61 0.00 44.60 2.23
401 405 3.117701 TGAAAGGAATCCAATCCGCCATA 60.118 43.478 0.61 0.00 44.60 2.74
403 407 1.005332 TGAAAGGAATCCAATCCGCCA 59.995 47.619 0.61 0.00 44.60 5.69
405 409 3.866883 TTTGAAAGGAATCCAATCCGC 57.133 42.857 0.61 0.00 44.60 5.54
406 410 5.048083 TCAGTTTTGAAAGGAATCCAATCCG 60.048 40.000 0.61 0.00 44.60 4.18
407 411 6.345096 TCAGTTTTGAAAGGAATCCAATCC 57.655 37.500 0.61 0.00 39.96 3.01
438 442 8.889717 CCCGGCGAGACATAATAAATAATAAAT 58.110 33.333 9.30 0.00 0.00 1.40
439 443 8.095792 TCCCGGCGAGACATAATAAATAATAAA 58.904 33.333 9.30 0.00 0.00 1.40
442 446 6.045072 TCCCGGCGAGACATAATAAATAAT 57.955 37.500 9.30 0.00 0.00 1.28
443 447 5.471556 TCCCGGCGAGACATAATAAATAA 57.528 39.130 9.30 0.00 0.00 1.40
444 448 5.657474 GATCCCGGCGAGACATAATAAATA 58.343 41.667 9.30 0.00 0.00 1.40
446 459 3.613193 CGATCCCGGCGAGACATAATAAA 60.613 47.826 9.30 0.00 0.00 1.40
452 465 2.518587 TCGATCCCGGCGAGACAT 60.519 61.111 9.30 0.00 36.24 3.06
458 475 1.296056 AACAAAACTCGATCCCGGCG 61.296 55.000 0.00 0.00 36.24 6.46
459 476 0.446616 GAACAAAACTCGATCCCGGC 59.553 55.000 0.00 0.00 36.24 6.13
466 483 4.993029 AAAATGTGGGAACAAAACTCGA 57.007 36.364 0.00 0.00 46.06 4.04
467 484 5.105752 TCAAAAATGTGGGAACAAAACTCG 58.894 37.500 0.00 0.00 46.06 4.18
468 485 7.279758 TCAATCAAAAATGTGGGAACAAAACTC 59.720 33.333 0.00 0.00 46.06 3.01
469 486 7.108847 TCAATCAAAAATGTGGGAACAAAACT 58.891 30.769 0.00 0.00 46.06 2.66
484 505 7.707464 CCCGAATCATCATCAATCAATCAAAAA 59.293 33.333 0.00 0.00 0.00 1.94
490 511 5.472478 CAGTCCCGAATCATCATCAATCAAT 59.528 40.000 0.00 0.00 0.00 2.57
491 512 4.818005 CAGTCCCGAATCATCATCAATCAA 59.182 41.667 0.00 0.00 0.00 2.57
492 513 4.141642 ACAGTCCCGAATCATCATCAATCA 60.142 41.667 0.00 0.00 0.00 2.57
493 514 4.384056 ACAGTCCCGAATCATCATCAATC 58.616 43.478 0.00 0.00 0.00 2.67
494 515 4.428294 ACAGTCCCGAATCATCATCAAT 57.572 40.909 0.00 0.00 0.00 2.57
507 528 7.765307 TCACTTACTTAGTTTATACAGTCCCG 58.235 38.462 0.00 0.00 33.85 5.14
517 538 9.903682 GTGTGTCTACATCACTTACTTAGTTTA 57.096 33.333 0.00 0.00 39.39 2.01
520 541 7.013942 TGTGTGTGTCTACATCACTTACTTAGT 59.986 37.037 16.37 0.00 39.39 2.24
521 542 7.326305 GTGTGTGTGTCTACATCACTTACTTAG 59.674 40.741 16.37 0.00 39.30 2.18
522 543 7.143340 GTGTGTGTGTCTACATCACTTACTTA 58.857 38.462 16.37 0.94 39.30 2.24
524 545 5.068591 TGTGTGTGTGTCTACATCACTTACT 59.931 40.000 16.37 0.00 41.06 2.24
525 546 5.175126 GTGTGTGTGTGTCTACATCACTTAC 59.825 44.000 16.37 13.59 41.06 2.34
526 547 5.163499 TGTGTGTGTGTGTCTACATCACTTA 60.163 40.000 16.37 7.73 41.06 2.24
527 548 4.119862 GTGTGTGTGTGTCTACATCACTT 58.880 43.478 16.37 0.00 41.06 3.16
528 549 3.132111 TGTGTGTGTGTGTCTACATCACT 59.868 43.478 16.37 0.00 41.06 3.41
530 551 3.810310 TGTGTGTGTGTGTCTACATCA 57.190 42.857 0.00 0.00 39.39 3.07
531 552 4.808895 TCTTTGTGTGTGTGTGTCTACATC 59.191 41.667 0.00 0.00 39.39 3.06
534 555 5.350365 TCTTTCTTTGTGTGTGTGTGTCTAC 59.650 40.000 0.00 0.00 0.00 2.59
576 628 7.469537 TCAACACCTTTTCCTTCTAAACAAA 57.530 32.000 0.00 0.00 0.00 2.83
577 629 7.654022 ATCAACACCTTTTCCTTCTAAACAA 57.346 32.000 0.00 0.00 0.00 2.83
578 630 7.654022 AATCAACACCTTTTCCTTCTAAACA 57.346 32.000 0.00 0.00 0.00 2.83
579 631 8.817100 CAAAATCAACACCTTTTCCTTCTAAAC 58.183 33.333 0.00 0.00 0.00 2.01
580 632 8.536175 ACAAAATCAACACCTTTTCCTTCTAAA 58.464 29.630 0.00 0.00 0.00 1.85
581 633 8.073467 ACAAAATCAACACCTTTTCCTTCTAA 57.927 30.769 0.00 0.00 0.00 2.10
582 634 7.654022 ACAAAATCAACACCTTTTCCTTCTA 57.346 32.000 0.00 0.00 0.00 2.10
584 636 8.887036 AATACAAAATCAACACCTTTTCCTTC 57.113 30.769 0.00 0.00 0.00 3.46
661 814 3.076916 GGCCCATCCAAAGCCCAC 61.077 66.667 0.00 0.00 41.00 4.61
692 852 3.365969 GCCCGAACTGTGAATTTACCAAG 60.366 47.826 0.00 0.00 0.00 3.61
693 853 2.554893 GCCCGAACTGTGAATTTACCAA 59.445 45.455 0.00 0.00 0.00 3.67
709 869 3.006728 CAACCCCCTACTGCCCGA 61.007 66.667 0.00 0.00 0.00 5.14
710 870 4.796495 GCAACCCCCTACTGCCCG 62.796 72.222 0.00 0.00 0.00 6.13
718 879 1.212250 AACCCTAATCGCAACCCCCT 61.212 55.000 0.00 0.00 0.00 4.79
775 936 1.466529 GCTTAGCTGCGAAAGAAAGGC 60.467 52.381 18.06 4.61 0.00 4.35
786 947 2.010497 GTGAGGGTTTAGCTTAGCTGC 58.990 52.381 17.97 6.84 40.10 5.25
788 949 1.560146 GGGTGAGGGTTTAGCTTAGCT 59.440 52.381 12.67 12.67 43.41 3.32
852 1030 2.547007 GGGTTTGGTTTGGGTTCGAATG 60.547 50.000 0.00 0.00 0.00 2.67
853 1031 1.689813 GGGTTTGGTTTGGGTTCGAAT 59.310 47.619 0.00 0.00 0.00 3.34
855 1033 1.102222 CGGGTTTGGTTTGGGTTCGA 61.102 55.000 0.00 0.00 0.00 3.71
857 1035 0.671796 CTCGGGTTTGGTTTGGGTTC 59.328 55.000 0.00 0.00 0.00 3.62
858 1036 1.396607 GCTCGGGTTTGGTTTGGGTT 61.397 55.000 0.00 0.00 0.00 4.11
859 1037 1.830847 GCTCGGGTTTGGTTTGGGT 60.831 57.895 0.00 0.00 0.00 4.51
861 1039 2.914908 CGGCTCGGGTTTGGTTTGG 61.915 63.158 0.00 0.00 0.00 3.28
862 1040 2.642700 CGGCTCGGGTTTGGTTTG 59.357 61.111 0.00 0.00 0.00 2.93
863 1041 3.292159 GCGGCTCGGGTTTGGTTT 61.292 61.111 0.00 0.00 0.00 3.27
894 1078 2.511403 GGGAGGGGGCGAAGATTC 59.489 66.667 0.00 0.00 0.00 2.52
905 1089 4.806339 AGGAGGAAGGCGGGAGGG 62.806 72.222 0.00 0.00 0.00 4.30
906 1090 2.689034 AAGGAGGAAGGCGGGAGG 60.689 66.667 0.00 0.00 0.00 4.30
907 1091 2.736826 GGAAGGAGGAAGGCGGGAG 61.737 68.421 0.00 0.00 0.00 4.30
908 1092 2.687566 GGAAGGAGGAAGGCGGGA 60.688 66.667 0.00 0.00 0.00 5.14
909 1093 3.798511 GGGAAGGAGGAAGGCGGG 61.799 72.222 0.00 0.00 0.00 6.13
910 1094 2.258748 GAAGGGAAGGAGGAAGGCGG 62.259 65.000 0.00 0.00 0.00 6.13
911 1095 1.222113 GAAGGGAAGGAGGAAGGCG 59.778 63.158 0.00 0.00 0.00 5.52
912 1096 1.610327 GGAAGGGAAGGAGGAAGGC 59.390 63.158 0.00 0.00 0.00 4.35
913 1097 0.253394 AGGGAAGGGAAGGAGGAAGG 60.253 60.000 0.00 0.00 0.00 3.46
914 1098 1.562008 GAAGGGAAGGGAAGGAGGAAG 59.438 57.143 0.00 0.00 0.00 3.46
915 1099 1.670059 GAAGGGAAGGGAAGGAGGAA 58.330 55.000 0.00 0.00 0.00 3.36
916 1100 0.253207 GGAAGGGAAGGGAAGGAGGA 60.253 60.000 0.00 0.00 0.00 3.71
917 1101 1.282653 GGGAAGGGAAGGGAAGGAGG 61.283 65.000 0.00 0.00 0.00 4.30
918 1102 0.253394 AGGGAAGGGAAGGGAAGGAG 60.253 60.000 0.00 0.00 0.00 3.69
919 1103 0.198696 AAGGGAAGGGAAGGGAAGGA 59.801 55.000 0.00 0.00 0.00 3.36
920 1104 0.626382 GAAGGGAAGGGAAGGGAAGG 59.374 60.000 0.00 0.00 0.00 3.46
921 1105 0.626382 GGAAGGGAAGGGAAGGGAAG 59.374 60.000 0.00 0.00 0.00 3.46
922 1106 0.849540 GGGAAGGGAAGGGAAGGGAA 60.850 60.000 0.00 0.00 0.00 3.97
923 1107 1.230182 GGGAAGGGAAGGGAAGGGA 60.230 63.158 0.00 0.00 0.00 4.20
924 1108 0.851332 AAGGGAAGGGAAGGGAAGGG 60.851 60.000 0.00 0.00 0.00 3.95
925 1109 0.626382 GAAGGGAAGGGAAGGGAAGG 59.374 60.000 0.00 0.00 0.00 3.46
926 1110 0.626382 GGAAGGGAAGGGAAGGGAAG 59.374 60.000 0.00 0.00 0.00 3.46
927 1111 0.849540 GGGAAGGGAAGGGAAGGGAA 60.850 60.000 0.00 0.00 0.00 3.97
928 1112 1.230182 GGGAAGGGAAGGGAAGGGA 60.230 63.158 0.00 0.00 0.00 4.20
929 1113 0.851332 AAGGGAAGGGAAGGGAAGGG 60.851 60.000 0.00 0.00 0.00 3.95
930 1114 0.626382 GAAGGGAAGGGAAGGGAAGG 59.374 60.000 0.00 0.00 0.00 3.46
931 1115 0.626382 GGAAGGGAAGGGAAGGGAAG 59.374 60.000 0.00 0.00 0.00 3.46
932 1116 0.849540 GGGAAGGGAAGGGAAGGGAA 60.850 60.000 0.00 0.00 0.00 3.97
933 1117 1.230182 GGGAAGGGAAGGGAAGGGA 60.230 63.158 0.00 0.00 0.00 4.20
934 1118 0.851332 AAGGGAAGGGAAGGGAAGGG 60.851 60.000 0.00 0.00 0.00 3.95
935 1119 0.626382 GAAGGGAAGGGAAGGGAAGG 59.374 60.000 0.00 0.00 0.00 3.46
936 1120 0.626382 GGAAGGGAAGGGAAGGGAAG 59.374 60.000 0.00 0.00 0.00 3.46
937 1121 0.849540 GGGAAGGGAAGGGAAGGGAA 60.850 60.000 0.00 0.00 0.00 3.97
938 1122 1.230182 GGGAAGGGAAGGGAAGGGA 60.230 63.158 0.00 0.00 0.00 4.20
939 1123 2.317378 GGGGAAGGGAAGGGAAGGG 61.317 68.421 0.00 0.00 0.00 3.95
940 1124 2.680370 CGGGGAAGGGAAGGGAAGG 61.680 68.421 0.00 0.00 0.00 3.46
941 1125 2.998949 CGGGGAAGGGAAGGGAAG 59.001 66.667 0.00 0.00 0.00 3.46
970 1158 3.541713 GGAGGGCTCCGATCGCTT 61.542 66.667 10.32 0.00 40.36 4.68
984 1196 3.551863 GCGACATCTTGTATGAGGAGGAG 60.552 52.174 0.00 0.00 0.00 3.69
985 1197 2.362397 GCGACATCTTGTATGAGGAGGA 59.638 50.000 0.00 0.00 0.00 3.71
986 1198 2.546795 GGCGACATCTTGTATGAGGAGG 60.547 54.545 0.00 0.00 0.00 4.30
988 1200 1.067060 CGGCGACATCTTGTATGAGGA 59.933 52.381 0.00 0.00 0.00 3.71
989 1201 1.491670 CGGCGACATCTTGTATGAGG 58.508 55.000 0.00 0.00 0.00 3.86
991 1203 0.529773 GCCGGCGACATCTTGTATGA 60.530 55.000 12.58 0.00 0.00 2.15
1024 1269 2.430465 CTCCACCTCAACCATCTTGTG 58.570 52.381 0.00 0.00 0.00 3.33
1030 1275 2.671070 CGCCTCCACCTCAACCAT 59.329 61.111 0.00 0.00 0.00 3.55
1174 1419 1.961394 AGCGGAAGGGGAAAAGAAAAC 59.039 47.619 0.00 0.00 0.00 2.43
1175 1420 1.960689 CAGCGGAAGGGGAAAAGAAAA 59.039 47.619 0.00 0.00 0.00 2.29
1176 1421 1.133606 ACAGCGGAAGGGGAAAAGAAA 60.134 47.619 0.00 0.00 0.00 2.52
1190 1438 4.514577 ATCGAAGCCGGACAGCGG 62.515 66.667 5.05 0.00 38.01 5.52
1192 1440 1.880340 CAGATCGAAGCCGGACAGC 60.880 63.158 5.05 0.00 36.24 4.40
1193 1441 1.880340 GCAGATCGAAGCCGGACAG 60.880 63.158 5.05 0.00 36.24 3.51
1194 1442 2.184322 GCAGATCGAAGCCGGACA 59.816 61.111 5.05 0.00 36.24 4.02
1195 1443 1.590259 GAGCAGATCGAAGCCGGAC 60.590 63.158 5.05 0.00 36.24 4.79
1196 1444 1.754621 AGAGCAGATCGAAGCCGGA 60.755 57.895 5.05 0.00 36.24 5.14
1197 1445 1.591059 CAGAGCAGATCGAAGCCGG 60.591 63.158 0.00 0.00 36.24 6.13
1198 1446 0.459237 AACAGAGCAGATCGAAGCCG 60.459 55.000 0.00 0.00 37.07 5.52
1199 1447 1.285578 GAACAGAGCAGATCGAAGCC 58.714 55.000 0.00 0.00 0.00 4.35
1200 1448 1.285578 GGAACAGAGCAGATCGAAGC 58.714 55.000 0.00 0.00 0.00 3.86
1201 1449 1.554392 CGGAACAGAGCAGATCGAAG 58.446 55.000 0.00 0.00 0.00 3.79
1211 1459 0.747255 ATGGATCGACCGGAACAGAG 59.253 55.000 9.46 0.00 42.61 3.35
1212 1460 0.744874 GATGGATCGACCGGAACAGA 59.255 55.000 9.46 1.34 42.61 3.41
1227 1475 7.768240 TCAATTCAAATCAGTTGATCAGATGG 58.232 34.615 8.80 1.04 45.71 3.51
1245 1547 8.597227 GCGATCAAATGAAATCAAATCAATTCA 58.403 29.630 0.00 0.00 36.35 2.57
1383 1685 0.756070 GGTACTAGAAGCCTCCGCCT 60.756 60.000 0.00 0.00 34.57 5.52
1384 1686 1.041447 TGGTACTAGAAGCCTCCGCC 61.041 60.000 0.00 0.00 34.57 6.13
1385 1687 0.822164 TTGGTACTAGAAGCCTCCGC 59.178 55.000 0.00 0.00 0.00 5.54
1387 1689 2.696187 CTCCTTGGTACTAGAAGCCTCC 59.304 54.545 0.00 0.00 0.00 4.30
1388 1690 2.696187 CCTCCTTGGTACTAGAAGCCTC 59.304 54.545 0.00 0.00 0.00 4.70
1398 1730 1.689892 CCTCCTCCTCCTCCTTGGTAC 60.690 61.905 0.00 0.00 37.07 3.34
1426 1758 1.067916 GTTGGTGCTGGCCTTGTTG 59.932 57.895 3.32 0.00 0.00 3.33
1427 1759 0.975040 TTGTTGGTGCTGGCCTTGTT 60.975 50.000 3.32 0.00 0.00 2.83
1437 1769 2.229792 TGGTCTTGATCTTGTTGGTGC 58.770 47.619 0.00 0.00 0.00 5.01
1438 1770 4.023707 GTCTTGGTCTTGATCTTGTTGGTG 60.024 45.833 0.00 0.00 0.00 4.17
1439 1771 4.137543 GTCTTGGTCTTGATCTTGTTGGT 58.862 43.478 0.00 0.00 0.00 3.67
1444 1809 3.919216 AGTCGTCTTGGTCTTGATCTTG 58.081 45.455 0.00 0.00 0.00 3.02
1449 1814 3.252701 GTGAGTAGTCGTCTTGGTCTTGA 59.747 47.826 0.00 0.00 0.00 3.02
1456 1821 1.266175 ACGGTGTGAGTAGTCGTCTTG 59.734 52.381 0.00 0.00 0.00 3.02
1458 1823 0.873054 CACGGTGTGAGTAGTCGTCT 59.127 55.000 0.00 0.00 35.23 4.18
1465 1830 1.248785 GGAGCTCCACGGTGTGAGTA 61.249 60.000 28.43 0.00 35.23 2.59
1468 1833 2.523168 TGGAGCTCCACGGTGTGA 60.523 61.111 32.00 6.16 42.01 3.58
1516 1881 3.434319 ATCCTGCGCCGTTGCTTG 61.434 61.111 4.18 0.00 35.36 4.01
1600 1971 3.127203 CGTATATTACGCCTGAGGAGAGG 59.873 52.174 9.85 0.00 45.81 3.69
1639 2010 2.441532 TCCGACTGGGACCGATCC 60.442 66.667 0.00 0.00 45.42 3.36
1646 2017 1.639722 TCATCTTGTTCCGACTGGGA 58.360 50.000 0.00 0.00 45.40 4.37
1647 2018 2.076863 GTTCATCTTGTTCCGACTGGG 58.923 52.381 0.00 0.00 35.24 4.45
1650 2021 4.271696 TCATGTTCATCTTGTTCCGACT 57.728 40.909 0.00 0.00 0.00 4.18
1651 2022 4.690748 TCTTCATGTTCATCTTGTTCCGAC 59.309 41.667 0.00 0.00 0.00 4.79
1652 2023 4.893608 TCTTCATGTTCATCTTGTTCCGA 58.106 39.130 0.00 0.00 0.00 4.55
1653 2024 4.093998 CCTCTTCATGTTCATCTTGTTCCG 59.906 45.833 0.00 0.00 0.00 4.30
1654 2025 5.006386 ACCTCTTCATGTTCATCTTGTTCC 58.994 41.667 0.00 0.00 0.00 3.62
1655 2026 5.471456 ACACCTCTTCATGTTCATCTTGTTC 59.529 40.000 0.00 0.00 0.00 3.18
1656 2027 5.380043 ACACCTCTTCATGTTCATCTTGTT 58.620 37.500 0.00 0.00 0.00 2.83
1657 2028 4.978099 ACACCTCTTCATGTTCATCTTGT 58.022 39.130 0.00 0.00 0.00 3.16
1658 2029 5.240183 ACAACACCTCTTCATGTTCATCTTG 59.760 40.000 0.00 0.00 36.92 3.02
1659 2030 5.380043 ACAACACCTCTTCATGTTCATCTT 58.620 37.500 0.00 0.00 36.92 2.40
1660 2031 4.978099 ACAACACCTCTTCATGTTCATCT 58.022 39.130 0.00 0.00 36.92 2.90
1667 2038 1.955778 TGCCAACAACACCTCTTCATG 59.044 47.619 0.00 0.00 0.00 3.07
1736 2118 2.875296 AGGCTGCTGATCTAGGACTAG 58.125 52.381 0.00 0.00 34.56 2.57
1741 2123 2.008242 AGGTAGGCTGCTGATCTAGG 57.992 55.000 1.79 0.00 0.00 3.02
1742 2124 2.823154 GGTAGGTAGGCTGCTGATCTAG 59.177 54.545 1.79 0.00 0.00 2.43
1748 2130 0.676736 GCTAGGTAGGTAGGCTGCTG 59.323 60.000 1.79 0.00 0.00 4.41
1753 2135 1.409427 CACACAGCTAGGTAGGTAGGC 59.591 57.143 0.00 0.00 31.93 3.93
1766 2148 0.525761 ACAACCAACACACACACAGC 59.474 50.000 0.00 0.00 0.00 4.40
1769 2151 1.067915 AGCAACAACCAACACACACAC 60.068 47.619 0.00 0.00 0.00 3.82
1770 2152 1.067985 CAGCAACAACCAACACACACA 60.068 47.619 0.00 0.00 0.00 3.72
1771 2153 1.627879 CAGCAACAACCAACACACAC 58.372 50.000 0.00 0.00 0.00 3.82
1772 2154 0.529833 CCAGCAACAACCAACACACA 59.470 50.000 0.00 0.00 0.00 3.72
1773 2155 0.805711 GCCAGCAACAACCAACACAC 60.806 55.000 0.00 0.00 0.00 3.82
1785 2167 0.821711 AAGCAACGGTAAGCCAGCAA 60.822 50.000 2.34 0.00 34.09 3.91
1791 2173 1.529865 ACGAAAGAAGCAACGGTAAGC 59.470 47.619 0.00 0.00 0.00 3.09
1832 2214 1.915141 AACAGCACAGGGGATCAAAG 58.085 50.000 0.00 0.00 0.00 2.77
1833 2215 3.517296 TTAACAGCACAGGGGATCAAA 57.483 42.857 0.00 0.00 0.00 2.69
1834 2216 3.355378 CATTAACAGCACAGGGGATCAA 58.645 45.455 0.00 0.00 0.00 2.57
1835 2217 2.945440 GCATTAACAGCACAGGGGATCA 60.945 50.000 0.00 0.00 0.00 2.92
1836 2218 1.678101 GCATTAACAGCACAGGGGATC 59.322 52.381 0.00 0.00 0.00 3.36
1837 2219 1.686115 GGCATTAACAGCACAGGGGAT 60.686 52.381 4.36 0.00 0.00 3.85
1838 2220 0.323360 GGCATTAACAGCACAGGGGA 60.323 55.000 4.36 0.00 0.00 4.81
1839 2221 0.323725 AGGCATTAACAGCACAGGGG 60.324 55.000 4.36 0.00 0.00 4.79
1856 2238 1.202533 ACAAACAGACGGACAGACAGG 60.203 52.381 0.00 0.00 0.00 4.00
1862 2244 2.420722 GGAACAAACAAACAGACGGACA 59.579 45.455 0.00 0.00 0.00 4.02
1863 2245 2.420722 TGGAACAAACAAACAGACGGAC 59.579 45.455 0.00 0.00 31.92 4.79
1864 2246 2.712709 TGGAACAAACAAACAGACGGA 58.287 42.857 0.00 0.00 31.92 4.69
1883 2265 9.295214 CAGATTAAGTCAGACAGTACATACTTG 57.705 37.037 2.66 0.00 33.46 3.16
1886 2268 7.258441 TGCAGATTAAGTCAGACAGTACATAC 58.742 38.462 2.66 0.00 0.00 2.39
1894 2276 4.325972 TGCATTGCAGATTAAGTCAGACA 58.674 39.130 7.38 0.00 33.32 3.41
1914 2296 2.136728 TGTCACTTTGCATTGCATTGC 58.863 42.857 23.33 23.33 38.76 3.56
1915 2297 4.052608 TCTTGTCACTTTGCATTGCATTG 58.947 39.130 12.95 10.60 38.76 2.82
1916 2298 4.325028 TCTTGTCACTTTGCATTGCATT 57.675 36.364 12.95 0.00 38.76 3.56
1917 2299 4.053295 GTTCTTGTCACTTTGCATTGCAT 58.947 39.130 12.95 0.00 38.76 3.96
1937 2319 6.772716 ACAGGATTAACATGACTTGACTTGTT 59.227 34.615 0.00 0.00 39.90 2.83
1962 2399 6.346477 AGTAAGAATGACAGCAACACTAGA 57.654 37.500 0.00 0.00 0.00 2.43
1991 2428 1.449956 CTCTGCTCCCTGCTGCTTC 60.450 63.158 0.00 0.00 43.37 3.86
1992 2429 0.906756 TACTCTGCTCCCTGCTGCTT 60.907 55.000 0.00 0.00 43.37 3.91
1998 2435 1.002274 ACCCCTACTCTGCTCCCTG 59.998 63.158 0.00 0.00 0.00 4.45
1999 2436 1.002274 CACCCCTACTCTGCTCCCT 59.998 63.158 0.00 0.00 0.00 4.20
2000 2437 0.617820 TTCACCCCTACTCTGCTCCC 60.618 60.000 0.00 0.00 0.00 4.30
2001 2438 0.827368 CTTCACCCCTACTCTGCTCC 59.173 60.000 0.00 0.00 0.00 4.70
2002 2439 1.562783 ACTTCACCCCTACTCTGCTC 58.437 55.000 0.00 0.00 0.00 4.26
2015 2452 2.166664 CTGCCCCACTCTACTACTTCAC 59.833 54.545 0.00 0.00 0.00 3.18
2018 2455 1.622725 CCCTGCCCCACTCTACTACTT 60.623 57.143 0.00 0.00 0.00 2.24
2019 2456 0.032017 CCCTGCCCCACTCTACTACT 60.032 60.000 0.00 0.00 0.00 2.57
2020 2457 1.049289 CCCCTGCCCCACTCTACTAC 61.049 65.000 0.00 0.00 0.00 2.73
2021 2458 1.226104 TCCCCTGCCCCACTCTACTA 61.226 60.000 0.00 0.00 0.00 1.82
2040 2477 3.137728 TCATCCATCACCTCTTGCATCAT 59.862 43.478 0.00 0.00 0.00 2.45
2067 2505 1.674441 CGGATGCTGCAGACATGAAAT 59.326 47.619 20.43 0.00 0.00 2.17
2068 2506 1.089112 CGGATGCTGCAGACATGAAA 58.911 50.000 20.43 0.00 0.00 2.69
2069 2507 0.036105 ACGGATGCTGCAGACATGAA 60.036 50.000 20.43 0.00 0.00 2.57
2070 2508 0.036105 AACGGATGCTGCAGACATGA 60.036 50.000 20.43 0.00 0.00 3.07
2071 2509 0.098200 CAACGGATGCTGCAGACATG 59.902 55.000 20.43 11.54 0.00 3.21
2072 2510 2.474561 CAACGGATGCTGCAGACAT 58.525 52.632 20.43 19.73 0.00 3.06
2073 2511 3.970721 CAACGGATGCTGCAGACA 58.029 55.556 20.43 15.57 0.00 3.41
2085 2523 1.401552 CTGTACCATGGAATGCAACGG 59.598 52.381 21.47 7.53 44.97 4.44
2086 2524 2.083774 ACTGTACCATGGAATGCAACG 58.916 47.619 21.47 0.00 44.97 4.10
2087 2525 2.819608 ACACTGTACCATGGAATGCAAC 59.180 45.455 21.47 6.92 44.97 4.17
2090 2528 2.943033 GGTACACTGTACCATGGAATGC 59.057 50.000 27.19 0.24 44.97 3.56
2106 2544 2.423874 CGCAGTGGTGGTGGTACA 59.576 61.111 0.00 0.00 0.00 2.90
2107 2545 2.358247 CCGCAGTGGTGGTGGTAC 60.358 66.667 0.00 0.00 39.94 3.34
2110 2548 3.620419 TATGCCGCAGTGGTGGTGG 62.620 63.158 0.89 0.00 46.76 4.61
2111 2549 1.647545 CTTATGCCGCAGTGGTGGTG 61.648 60.000 0.89 0.00 46.76 4.17
2114 2552 1.665679 CTAACTTATGCCGCAGTGGTG 59.334 52.381 0.89 0.00 41.21 4.17
2115 2553 1.278127 ACTAACTTATGCCGCAGTGGT 59.722 47.619 0.89 0.00 41.21 4.16
2116 2554 2.024176 ACTAACTTATGCCGCAGTGG 57.976 50.000 0.00 0.00 42.50 4.00
2117 2555 4.181578 ACTAACTAACTTATGCCGCAGTG 58.818 43.478 0.00 0.00 0.00 3.66
2118 2556 4.467198 ACTAACTAACTTATGCCGCAGT 57.533 40.909 0.00 0.00 0.00 4.40
2119 2557 6.040878 ACTAACTAACTAACTTATGCCGCAG 58.959 40.000 0.00 0.00 0.00 5.18
2120 2558 5.969423 ACTAACTAACTAACTTATGCCGCA 58.031 37.500 0.00 0.00 0.00 5.69
2121 2559 6.898912 AACTAACTAACTAACTTATGCCGC 57.101 37.500 0.00 0.00 0.00 6.53
2132 2570 9.729281 CCAACTTGGGAAATAACTAACTAACTA 57.271 33.333 0.00 0.00 32.67 2.24
2133 2571 8.442374 TCCAACTTGGGAAATAACTAACTAACT 58.558 33.333 8.01 0.00 38.32 2.24
2148 2586 5.515106 TCTTTCTTTCTTTCCAACTTGGGA 58.485 37.500 8.01 0.00 38.32 4.37
2149 2587 5.852282 TCTTTCTTTCTTTCCAACTTGGG 57.148 39.130 8.01 0.00 38.32 4.12
2150 2588 7.547227 TCTTTCTTTCTTTCTTTCCAACTTGG 58.453 34.615 0.74 0.74 39.43 3.61
2151 2589 8.986477 TTCTTTCTTTCTTTCTTTCCAACTTG 57.014 30.769 0.00 0.00 0.00 3.16
2153 2591 9.025041 TCTTTCTTTCTTTCTTTCTTTCCAACT 57.975 29.630 0.00 0.00 0.00 3.16
2154 2592 9.639601 TTCTTTCTTTCTTTCTTTCTTTCCAAC 57.360 29.630 0.00 0.00 0.00 3.77
2180 2680 8.595362 TCCCTTTCTTTCTTTCTTTCTTTCTT 57.405 30.769 0.00 0.00 0.00 2.52
2181 2681 8.595362 TTCCCTTTCTTTCTTTCTTTCTTTCT 57.405 30.769 0.00 0.00 0.00 2.52
2182 2682 8.470805 ACTTCCCTTTCTTTCTTTCTTTCTTTC 58.529 33.333 0.00 0.00 0.00 2.62
2183 2683 8.367660 ACTTCCCTTTCTTTCTTTCTTTCTTT 57.632 30.769 0.00 0.00 0.00 2.52
2184 2684 7.615757 TGACTTCCCTTTCTTTCTTTCTTTCTT 59.384 33.333 0.00 0.00 0.00 2.52
2186 2686 7.334844 TGACTTCCCTTTCTTTCTTTCTTTC 57.665 36.000 0.00 0.00 0.00 2.62
2188 2688 5.300539 GCTGACTTCCCTTTCTTTCTTTCTT 59.699 40.000 0.00 0.00 0.00 2.52
2189 2689 4.824537 GCTGACTTCCCTTTCTTTCTTTCT 59.175 41.667 0.00 0.00 0.00 2.52
2190 2690 4.022762 GGCTGACTTCCCTTTCTTTCTTTC 60.023 45.833 0.00 0.00 0.00 2.62
2192 2692 3.117512 TGGCTGACTTCCCTTTCTTTCTT 60.118 43.478 0.00 0.00 0.00 2.52
2193 2693 2.443255 TGGCTGACTTCCCTTTCTTTCT 59.557 45.455 0.00 0.00 0.00 2.52
2194 2694 2.863809 TGGCTGACTTCCCTTTCTTTC 58.136 47.619 0.00 0.00 0.00 2.62
2195 2695 3.425659 GATGGCTGACTTCCCTTTCTTT 58.574 45.455 0.00 0.00 0.00 2.52
2196 2696 2.616510 CGATGGCTGACTTCCCTTTCTT 60.617 50.000 0.00 0.00 0.00 2.52
2197 2697 1.065854 CGATGGCTGACTTCCCTTTCT 60.066 52.381 0.00 0.00 0.00 2.52
2198 2698 1.066143 TCGATGGCTGACTTCCCTTTC 60.066 52.381 0.00 0.00 0.00 2.62
2199 2699 0.984230 TCGATGGCTGACTTCCCTTT 59.016 50.000 0.00 0.00 0.00 3.11
2200 2700 1.134280 CATCGATGGCTGACTTCCCTT 60.134 52.381 17.96 0.00 0.00 3.95
2201 2701 0.467384 CATCGATGGCTGACTTCCCT 59.533 55.000 17.96 0.00 0.00 4.20
2202 2702 1.162800 GCATCGATGGCTGACTTCCC 61.163 60.000 26.00 2.21 0.00 3.97
2203 2703 0.179062 AGCATCGATGGCTGACTTCC 60.179 55.000 26.00 6.65 40.80 3.46
2204 2704 1.596727 GAAGCATCGATGGCTGACTTC 59.403 52.381 26.00 22.41 41.66 3.01
2205 2705 1.065926 TGAAGCATCGATGGCTGACTT 60.066 47.619 26.00 18.93 41.66 3.01
2225 2725 3.969802 GCTTGCTTGCTGGTGCGT 61.970 61.111 0.00 0.00 43.34 5.24
2226 2726 2.957484 TTTGCTTGCTTGCTGGTGCG 62.957 55.000 3.47 0.00 43.34 5.34
2246 2770 2.045536 CTGCCTGCTGGTCCTTCC 60.046 66.667 11.69 0.00 35.27 3.46
2247 2771 2.749441 GCTGCCTGCTGGTCCTTC 60.749 66.667 11.69 0.00 38.95 3.46
2249 2773 4.031129 CTGCTGCCTGCTGGTCCT 62.031 66.667 11.69 0.00 43.37 3.85
2254 2778 0.397187 ATAGATCCTGCTGCCTGCTG 59.603 55.000 0.00 0.00 43.37 4.41
2256 2780 0.686224 AGATAGATCCTGCTGCCTGC 59.314 55.000 0.00 0.00 43.25 4.85
2257 2781 2.094078 GCTAGATAGATCCTGCTGCCTG 60.094 54.545 0.00 0.00 0.00 4.85
2258 2782 2.178580 GCTAGATAGATCCTGCTGCCT 58.821 52.381 0.00 0.00 0.00 4.75
2259 2783 2.178580 AGCTAGATAGATCCTGCTGCC 58.821 52.381 0.00 0.00 35.53 4.85
2260 2784 4.269183 TCTAGCTAGATAGATCCTGCTGC 58.731 47.826 19.72 0.00 36.81 5.25
2272 2796 5.392995 TCTCTCCAGCATTTCTAGCTAGAT 58.607 41.667 23.81 7.68 41.14 1.98
2294 2823 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2295 2824 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2296 2825 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2297 2826 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2298 2827 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2299 2828 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2300 2829 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2301 2830 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2302 2831 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2303 2832 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2304 2833 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2305 2834 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2306 2835 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2307 2836 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2308 2837 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2309 2838 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
2310 2839 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
2311 2840 5.136068 TCTCTCTCTCTCTCTCTCTCTCT 57.864 47.826 0.00 0.00 0.00 3.10
2312 2841 6.222389 CAATCTCTCTCTCTCTCTCTCTCTC 58.778 48.000 0.00 0.00 0.00 3.20
2313 2842 5.454471 GCAATCTCTCTCTCTCTCTCTCTCT 60.454 48.000 0.00 0.00 0.00 3.10
2314 2843 4.754114 GCAATCTCTCTCTCTCTCTCTCTC 59.246 50.000 0.00 0.00 0.00 3.20
2315 2844 4.164796 TGCAATCTCTCTCTCTCTCTCTCT 59.835 45.833 0.00 0.00 0.00 3.10
2316 2845 4.454678 TGCAATCTCTCTCTCTCTCTCTC 58.545 47.826 0.00 0.00 0.00 3.20
2317 2846 4.164796 TCTGCAATCTCTCTCTCTCTCTCT 59.835 45.833 0.00 0.00 0.00 3.10
2318 2847 4.454678 TCTGCAATCTCTCTCTCTCTCTC 58.545 47.826 0.00 0.00 0.00 3.20
2319 2848 4.080129 ACTCTGCAATCTCTCTCTCTCTCT 60.080 45.833 0.00 0.00 0.00 3.10
2320 2849 4.036027 CACTCTGCAATCTCTCTCTCTCTC 59.964 50.000 0.00 0.00 0.00 3.20
2321 2850 3.949754 CACTCTGCAATCTCTCTCTCTCT 59.050 47.826 0.00 0.00 0.00 3.10
2322 2851 3.489738 GCACTCTGCAATCTCTCTCTCTC 60.490 52.174 0.00 0.00 44.26 3.20
2323 2852 2.428171 GCACTCTGCAATCTCTCTCTCT 59.572 50.000 0.00 0.00 44.26 3.10
2324 2853 2.813061 GCACTCTGCAATCTCTCTCTC 58.187 52.381 0.00 0.00 44.26 3.20
2325 2854 2.965572 GCACTCTGCAATCTCTCTCT 57.034 50.000 0.00 0.00 44.26 3.10
2350 2879 6.892310 AGAAACATTCTTGTTCACTTTTGC 57.108 33.333 0.00 0.00 45.30 3.68
2384 2913 3.787001 CAAGCTCCCTCCCGTCCC 61.787 72.222 0.00 0.00 0.00 4.46
2385 2914 4.475135 GCAAGCTCCCTCCCGTCC 62.475 72.222 0.00 0.00 0.00 4.79
2386 2915 3.378399 GAGCAAGCTCCCTCCCGTC 62.378 68.421 10.92 0.00 37.11 4.79
2387 2916 3.394836 GAGCAAGCTCCCTCCCGT 61.395 66.667 10.92 0.00 37.11 5.28
2394 2923 2.194326 GGGGGATGAGCAAGCTCC 59.806 66.667 18.54 5.03 42.09 4.70
2395 2924 1.148048 GAGGGGGATGAGCAAGCTC 59.852 63.158 14.90 14.90 43.01 4.09
2396 2925 2.381941 GGAGGGGGATGAGCAAGCT 61.382 63.158 0.00 0.00 0.00 3.74
2409 2938 0.468771 GGAAATGGATGCAGGGAGGG 60.469 60.000 0.00 0.00 0.00 4.30
2410 2939 0.259647 TGGAAATGGATGCAGGGAGG 59.740 55.000 0.00 0.00 0.00 4.30
2411 2940 2.376695 ATGGAAATGGATGCAGGGAG 57.623 50.000 0.00 0.00 0.00 4.30
2412 2941 2.669781 GAATGGAAATGGATGCAGGGA 58.330 47.619 0.00 0.00 0.00 4.20
2413 2942 1.690352 GGAATGGAAATGGATGCAGGG 59.310 52.381 0.00 0.00 0.00 4.45
2414 2943 2.390696 TGGAATGGAAATGGATGCAGG 58.609 47.619 0.00 0.00 0.00 4.85
2416 2945 4.544683 TGTATGGAATGGAAATGGATGCA 58.455 39.130 0.00 0.00 0.00 3.96
2417 2946 5.244402 TCATGTATGGAATGGAAATGGATGC 59.756 40.000 0.00 0.00 0.00 3.91
2418 2947 6.904463 TCATGTATGGAATGGAAATGGATG 57.096 37.500 0.00 0.00 0.00 3.51
2419 2948 8.172070 TGTATCATGTATGGAATGGAAATGGAT 58.828 33.333 0.00 0.00 0.00 3.41
2420 2949 7.525165 TGTATCATGTATGGAATGGAAATGGA 58.475 34.615 0.00 0.00 0.00 3.41
2421 2950 7.764141 TGTATCATGTATGGAATGGAAATGG 57.236 36.000 0.00 0.00 0.00 3.16
2425 2954 9.671279 GATGTATGTATCATGTATGGAATGGAA 57.329 33.333 0.00 0.00 0.00 3.53
2426 2955 8.824783 TGATGTATGTATCATGTATGGAATGGA 58.175 33.333 0.00 0.00 32.39 3.41
2427 2956 9.452287 TTGATGTATGTATCATGTATGGAATGG 57.548 33.333 0.00 0.00 36.97 3.16
2429 2958 9.676861 CCTTGATGTATGTATCATGTATGGAAT 57.323 33.333 0.00 0.00 36.97 3.01
2430 2959 8.879227 TCCTTGATGTATGTATCATGTATGGAA 58.121 33.333 0.00 0.00 36.97 3.53
2431 2960 8.434589 TCCTTGATGTATGTATCATGTATGGA 57.565 34.615 0.00 0.00 36.97 3.41
2432 2961 8.534496 TCTCCTTGATGTATGTATCATGTATGG 58.466 37.037 0.00 0.00 36.97 2.74
2433 2962 9.583765 CTCTCCTTGATGTATGTATCATGTATG 57.416 37.037 0.00 0.00 36.97 2.39
2434 2963 8.256605 GCTCTCCTTGATGTATGTATCATGTAT 58.743 37.037 0.00 0.00 36.97 2.29
2435 2964 7.310052 GGCTCTCCTTGATGTATGTATCATGTA 60.310 40.741 0.00 0.00 36.97 2.29
2436 2965 6.462500 GCTCTCCTTGATGTATGTATCATGT 58.538 40.000 0.00 0.00 36.97 3.21
2437 2966 5.873712 GGCTCTCCTTGATGTATGTATCATG 59.126 44.000 0.00 0.00 36.97 3.07
2438 2967 5.784390 AGGCTCTCCTTGATGTATGTATCAT 59.216 40.000 0.00 0.00 40.66 2.45
2439 2968 5.011431 CAGGCTCTCCTTGATGTATGTATCA 59.989 44.000 0.00 0.00 41.93 2.15
2440 2969 5.477510 CAGGCTCTCCTTGATGTATGTATC 58.522 45.833 0.00 0.00 41.93 2.24
2441 2970 4.285517 CCAGGCTCTCCTTGATGTATGTAT 59.714 45.833 0.00 0.00 41.93 2.29
2442 2971 3.643320 CCAGGCTCTCCTTGATGTATGTA 59.357 47.826 0.00 0.00 41.93 2.29
2443 2972 2.437281 CCAGGCTCTCCTTGATGTATGT 59.563 50.000 0.00 0.00 41.93 2.29
2444 2973 2.809665 GCCAGGCTCTCCTTGATGTATG 60.810 54.545 3.29 0.00 41.93 2.39
2445 2974 1.419387 GCCAGGCTCTCCTTGATGTAT 59.581 52.381 3.29 0.00 41.93 2.29
2446 2975 0.833287 GCCAGGCTCTCCTTGATGTA 59.167 55.000 3.29 0.00 41.93 2.29
2447 2976 0.913451 AGCCAGGCTCTCCTTGATGT 60.913 55.000 8.70 0.00 41.93 3.06
2448 2977 0.255318 AAGCCAGGCTCTCCTTGATG 59.745 55.000 16.53 0.00 41.93 3.07
2449 2978 0.998145 AAAGCCAGGCTCTCCTTGAT 59.002 50.000 16.53 0.00 41.93 2.57
2450 2979 0.773644 AAAAGCCAGGCTCTCCTTGA 59.226 50.000 16.53 0.00 41.93 3.02
2451 2980 0.886563 CAAAAGCCAGGCTCTCCTTG 59.113 55.000 16.53 12.22 41.93 3.61
2452 2981 0.480252 ACAAAAGCCAGGCTCTCCTT 59.520 50.000 16.53 1.55 41.93 3.36
2453 2982 0.037447 GACAAAAGCCAGGCTCTCCT 59.963 55.000 16.53 0.00 45.66 3.69
2454 2983 0.962855 GGACAAAAGCCAGGCTCTCC 60.963 60.000 16.53 12.61 38.25 3.71
2455 2984 0.962855 GGGACAAAAGCCAGGCTCTC 60.963 60.000 16.53 7.11 38.25 3.20
2456 2985 1.075659 GGGACAAAAGCCAGGCTCT 59.924 57.895 16.53 0.00 38.25 4.09
2457 2986 1.228552 TGGGACAAAAGCCAGGCTC 60.229 57.895 16.53 0.93 33.27 4.70
2473 3002 0.390124 ATTGTTGGTGTTGCTGCTGG 59.610 50.000 0.00 0.00 0.00 4.85
2482 3011 0.776080 AGGGGAGGGATTGTTGGTGT 60.776 55.000 0.00 0.00 0.00 4.16
2494 3023 3.193479 GCACAAATAAACAAGAGGGGAGG 59.807 47.826 0.00 0.00 0.00 4.30
2495 3024 3.826157 TGCACAAATAAACAAGAGGGGAG 59.174 43.478 0.00 0.00 0.00 4.30
2496 3025 3.572255 GTGCACAAATAAACAAGAGGGGA 59.428 43.478 13.17 0.00 0.00 4.81
2497 3026 3.573967 AGTGCACAAATAAACAAGAGGGG 59.426 43.478 21.04 0.00 0.00 4.79
2498 3027 4.037923 ACAGTGCACAAATAAACAAGAGGG 59.962 41.667 21.04 0.00 0.00 4.30
2499 3028 5.186996 ACAGTGCACAAATAAACAAGAGG 57.813 39.130 21.04 0.00 0.00 3.69
2500 3029 5.687285 GGAACAGTGCACAAATAAACAAGAG 59.313 40.000 21.04 0.00 0.00 2.85
2501 3030 5.359576 AGGAACAGTGCACAAATAAACAAGA 59.640 36.000 21.04 0.00 0.00 3.02
2502 3031 5.459762 CAGGAACAGTGCACAAATAAACAAG 59.540 40.000 21.04 0.00 0.00 3.16
2503 3032 5.105554 ACAGGAACAGTGCACAAATAAACAA 60.106 36.000 21.04 0.00 0.00 2.83
2504 3033 4.400884 ACAGGAACAGTGCACAAATAAACA 59.599 37.500 21.04 0.00 0.00 2.83
2505 3034 4.932146 ACAGGAACAGTGCACAAATAAAC 58.068 39.130 21.04 2.77 0.00 2.01
2511 3040 0.455410 GCAACAGGAACAGTGCACAA 59.545 50.000 21.04 0.00 0.00 3.33
2548 3077 4.811364 GGAGGAAGGCAGGCAGGC 62.811 72.222 0.00 0.00 44.61 4.85
2549 3078 3.013932 AGGAGGAAGGCAGGCAGG 61.014 66.667 0.00 0.00 0.00 4.85
2550 3079 1.633915 ATGAGGAGGAAGGCAGGCAG 61.634 60.000 0.00 0.00 0.00 4.85
2573 3102 1.375652 CAGACAGCAGTCCAGCAGG 60.376 63.158 5.52 0.00 46.15 4.85
2574 3103 0.949588 CACAGACAGCAGTCCAGCAG 60.950 60.000 5.52 0.00 46.15 4.24
2575 3104 1.070275 CACAGACAGCAGTCCAGCA 59.930 57.895 5.52 0.00 46.15 4.41
2576 3105 0.250038 TTCACAGACAGCAGTCCAGC 60.250 55.000 5.52 0.00 46.15 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.