Multiple sequence alignment - TraesCS3A01G535000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G535000 chr3A 100.000 4087 0 0 1 4087 746561035 746556949 0.000000e+00 7548.0
1 TraesCS3A01G535000 chr3A 85.610 549 46 22 1867 2403 746538526 746537999 2.780000e-151 545.0
2 TraesCS3A01G535000 chr3A 92.105 76 5 1 2267 2342 746546820 746546746 5.590000e-19 106.0
3 TraesCS3A01G535000 chr3D 90.113 2033 113 39 525 2490 611891651 611889640 0.000000e+00 2560.0
4 TraesCS3A01G535000 chr3D 87.764 711 45 12 2616 3311 611889481 611888798 0.000000e+00 793.0
5 TraesCS3A01G535000 chr3D 82.203 236 23 8 207 434 611900871 611900647 6.980000e-43 185.0
6 TraesCS3A01G535000 chr3D 76.630 368 47 28 2956 3310 611719186 611718845 2.530000e-37 167.0
7 TraesCS3A01G535000 chr3D 81.618 136 20 2 2267 2402 611884481 611884351 1.550000e-19 108.0
8 TraesCS3A01G535000 chr3D 89.873 79 1 4 3130 3207 611881450 611881378 1.210000e-15 95.3
9 TraesCS3A01G535000 chr3D 87.838 74 9 0 3414 3487 611888680 611888607 2.020000e-13 87.9
10 TraesCS3A01G535000 chr3B 86.637 1826 139 41 694 2472 829511178 829509411 0.000000e+00 1923.0
11 TraesCS3A01G535000 chr3B 81.474 950 72 37 2579 3459 829509303 829508389 0.000000e+00 684.0
12 TraesCS3A01G535000 chr3B 83.926 759 66 24 2579 3311 829503670 829502942 0.000000e+00 675.0
13 TraesCS3A01G535000 chr3B 89.881 168 14 3 3145 3311 829463548 829463383 3.200000e-51 213.0
14 TraesCS3A01G535000 chr3B 82.800 250 25 8 2817 3055 829473009 829472767 1.490000e-49 207.0
15 TraesCS3A01G535000 chr3B 84.962 133 13 5 3326 3458 829463322 829463197 1.190000e-25 128.0
16 TraesCS3A01G535000 chr3B 82.090 134 18 3 2267 2400 829487109 829486982 4.320000e-20 110.0
17 TraesCS3A01G535000 chr4A 96.680 512 16 1 3575 4085 474922428 474921917 0.000000e+00 850.0
18 TraesCS3A01G535000 chr2A 95.703 512 21 1 3575 4085 104890407 104889896 0.000000e+00 822.0
19 TraesCS3A01G535000 chr2A 90.612 490 38 6 3575 4058 665829339 665829826 0.000000e+00 643.0
20 TraesCS3A01G535000 chr5A 93.536 526 21 2 3573 4085 74587961 74587436 0.000000e+00 771.0
21 TraesCS3A01G535000 chr5A 81.444 900 123 22 1337 2224 125210830 125209963 0.000000e+00 697.0
22 TraesCS3A01G535000 chr5A 90.041 492 43 3 3575 4061 277327393 277326903 2.070000e-177 632.0
23 TraesCS3A01G535000 chr6A 81.778 900 120 23 1337 2224 12219816 12218949 0.000000e+00 713.0
24 TraesCS3A01G535000 chr1A 91.820 489 34 3 3575 4058 376977878 376978365 0.000000e+00 676.0
25 TraesCS3A01G535000 chr1A 83.282 323 35 12 3575 3892 376980582 376980274 3.110000e-71 279.0
26 TraesCS3A01G535000 chr5B 90.224 491 40 3 3575 4058 55498229 55498718 5.760000e-178 634.0
27 TraesCS3A01G535000 chr5B 84.592 649 87 9 1339 1986 266002756 266003392 2.070000e-177 632.0
28 TraesCS3A01G535000 chr4B 82.695 653 84 18 1339 1990 26318426 26317802 1.660000e-153 553.0
29 TraesCS3A01G535000 chr4B 86.667 90 9 1 2138 2224 26014762 26014673 3.360000e-16 97.1
30 TraesCS3A01G535000 chr4B 86.667 90 9 1 2138 2224 26056438 26056349 3.360000e-16 97.1
31 TraesCS3A01G535000 chr4B 86.667 90 9 1 2138 2224 26105761 26105672 3.360000e-16 97.1
32 TraesCS3A01G535000 chr4B 86.667 90 9 1 2138 2224 26152133 26152044 3.360000e-16 97.1
33 TraesCS3A01G535000 chr6D 78.085 867 127 33 1376 2225 284599435 284600255 1.320000e-134 490.0
34 TraesCS3A01G535000 chr4D 94.198 293 13 3 3571 3861 439872401 439872691 1.040000e-120 444.0
35 TraesCS3A01G535000 chr4D 83.573 347 47 6 1509 1851 216741790 216741450 2.370000e-82 316.0
36 TraesCS3A01G535000 chr4D 87.500 176 14 5 3890 4058 439875028 439875202 3.220000e-46 196.0
37 TraesCS3A01G535000 chr7A 78.383 532 92 7 1690 2218 565354656 565354145 1.420000e-84 324.0
38 TraesCS3A01G535000 chr6B 83.388 307 47 4 3629 3934 11192280 11191977 8.650000e-72 281.0
39 TraesCS3A01G535000 chr2D 91.045 201 16 2 3805 4004 628890812 628891011 1.870000e-68 270.0
40 TraesCS3A01G535000 chr1B 100.000 29 0 0 4030 4058 527841896 527841924 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G535000 chr3A 746556949 746561035 4086 True 7548.000000 7548 100.000000 1 4087 1 chr3A.!!$R3 4086
1 TraesCS3A01G535000 chr3A 746537999 746538526 527 True 545.000000 545 85.610000 1867 2403 1 chr3A.!!$R1 536
2 TraesCS3A01G535000 chr3D 611888607 611891651 3044 True 1146.966667 2560 88.571667 525 3487 3 chr3D.!!$R4 2962
3 TraesCS3A01G535000 chr3B 829508389 829511178 2789 True 1303.500000 1923 84.055500 694 3459 2 chr3B.!!$R5 2765
4 TraesCS3A01G535000 chr3B 829502942 829503670 728 True 675.000000 675 83.926000 2579 3311 1 chr3B.!!$R3 732
5 TraesCS3A01G535000 chr4A 474921917 474922428 511 True 850.000000 850 96.680000 3575 4085 1 chr4A.!!$R1 510
6 TraesCS3A01G535000 chr2A 104889896 104890407 511 True 822.000000 822 95.703000 3575 4085 1 chr2A.!!$R1 510
7 TraesCS3A01G535000 chr5A 74587436 74587961 525 True 771.000000 771 93.536000 3573 4085 1 chr5A.!!$R1 512
8 TraesCS3A01G535000 chr5A 125209963 125210830 867 True 697.000000 697 81.444000 1337 2224 1 chr5A.!!$R2 887
9 TraesCS3A01G535000 chr6A 12218949 12219816 867 True 713.000000 713 81.778000 1337 2224 1 chr6A.!!$R1 887
10 TraesCS3A01G535000 chr5B 266002756 266003392 636 False 632.000000 632 84.592000 1339 1986 1 chr5B.!!$F2 647
11 TraesCS3A01G535000 chr4B 26317802 26318426 624 True 553.000000 553 82.695000 1339 1990 1 chr4B.!!$R5 651
12 TraesCS3A01G535000 chr6D 284599435 284600255 820 False 490.000000 490 78.085000 1376 2225 1 chr6D.!!$F1 849
13 TraesCS3A01G535000 chr4D 439872401 439875202 2801 False 320.000000 444 90.849000 3571 4058 2 chr4D.!!$F1 487
14 TraesCS3A01G535000 chr7A 565354145 565354656 511 True 324.000000 324 78.383000 1690 2218 1 chr7A.!!$R1 528

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
199 200 0.036010 CGTTGGAGTTGCCCTGAGAT 60.036 55.0 0.00 0.0 34.97 2.75 F
702 716 0.100861 GTCCGTAGCAGTAGCAGTCC 59.899 60.0 0.00 0.0 45.49 3.85 F
1286 1351 0.178973 TGTCTCGGAGGGTGAACTGA 60.179 55.0 4.96 0.0 0.00 3.41 F
1315 1380 0.924090 CCGTGCTCGAATGCTTACTC 59.076 55.0 10.21 0.0 39.71 2.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1579 1652 0.107703 TGCGGGCATCTTCTTGGTAG 60.108 55.000 0.00 0.0 0.00 3.18 R
2608 2767 0.245539 GCATGCAGCACATTCTTGGT 59.754 50.000 14.21 0.0 44.79 3.67 R
3069 3296 0.966920 ATTCAGTCAGTCCGTCCGTT 59.033 50.000 0.00 0.0 0.00 4.44 R
3182 3410 1.320555 CCGTAGCAAGACATTCGTTCG 59.679 52.381 0.00 0.0 0.00 3.95 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 3.799755 GCCGGCGTGAACCATGAC 61.800 66.667 12.58 0.00 0.00 3.06
24 25 3.124921 CCGGCGTGAACCATGACC 61.125 66.667 6.01 0.00 0.00 4.02
25 26 3.487202 CGGCGTGAACCATGACCG 61.487 66.667 0.00 0.00 35.29 4.79
26 27 2.358247 GGCGTGAACCATGACCGT 60.358 61.111 0.00 0.00 0.00 4.83
27 28 1.964373 GGCGTGAACCATGACCGTT 60.964 57.895 0.00 0.00 0.00 4.44
28 29 1.206578 GCGTGAACCATGACCGTTG 59.793 57.895 0.00 0.00 0.00 4.10
29 30 1.503818 GCGTGAACCATGACCGTTGT 61.504 55.000 0.00 0.00 0.00 3.32
30 31 0.511221 CGTGAACCATGACCGTTGTC 59.489 55.000 0.00 0.00 42.12 3.18
45 46 8.500753 TGACCGTTGTCATTAGCTATATTTTT 57.499 30.769 0.00 0.00 46.40 1.94
46 47 8.394877 TGACCGTTGTCATTAGCTATATTTTTG 58.605 33.333 0.00 0.00 46.40 2.44
47 48 8.276252 ACCGTTGTCATTAGCTATATTTTTGT 57.724 30.769 0.00 0.00 0.00 2.83
48 49 8.736244 ACCGTTGTCATTAGCTATATTTTTGTT 58.264 29.630 0.00 0.00 0.00 2.83
49 50 9.009327 CCGTTGTCATTAGCTATATTTTTGTTG 57.991 33.333 0.00 0.00 0.00 3.33
50 51 8.523464 CGTTGTCATTAGCTATATTTTTGTTGC 58.477 33.333 0.00 0.00 0.00 4.17
51 52 9.573133 GTTGTCATTAGCTATATTTTTGTTGCT 57.427 29.630 0.00 0.00 34.92 3.91
65 66 7.935338 TTTTTGTTGCTTTGAAAAATTTGCA 57.065 24.000 0.00 0.00 0.00 4.08
66 67 8.530269 TTTTTGTTGCTTTGAAAAATTTGCAT 57.470 23.077 0.00 0.00 0.00 3.96
67 68 7.507672 TTTGTTGCTTTGAAAAATTTGCATG 57.492 28.000 0.00 0.00 0.00 4.06
68 69 5.035443 TGTTGCTTTGAAAAATTTGCATGC 58.965 33.333 11.82 11.82 0.00 4.06
69 70 4.895224 TGCTTTGAAAAATTTGCATGCA 57.105 31.818 18.46 18.46 0.00 3.96
70 71 4.849883 TGCTTTGAAAAATTTGCATGCAG 58.150 34.783 21.50 5.63 0.00 4.41
71 72 3.666797 GCTTTGAAAAATTTGCATGCAGC 59.333 39.130 21.50 12.19 45.96 5.25
72 73 3.900388 TTGAAAAATTTGCATGCAGCC 57.100 38.095 21.50 6.75 44.83 4.85
73 74 1.799403 TGAAAAATTTGCATGCAGCCG 59.201 42.857 21.50 0.00 44.83 5.52
74 75 1.129064 GAAAAATTTGCATGCAGCCGG 59.871 47.619 21.50 0.00 44.83 6.13
75 76 0.321021 AAAATTTGCATGCAGCCGGA 59.679 45.000 21.50 2.08 44.83 5.14
76 77 0.390209 AAATTTGCATGCAGCCGGAC 60.390 50.000 21.50 0.00 44.83 4.79
77 78 1.534336 AATTTGCATGCAGCCGGACA 61.534 50.000 21.50 0.37 44.83 4.02
78 79 1.940883 ATTTGCATGCAGCCGGACAG 61.941 55.000 21.50 0.00 44.83 3.51
98 99 3.276846 GAAATACGGGCGGCGCAT 61.277 61.111 34.36 20.29 0.00 4.73
99 100 3.236618 GAAATACGGGCGGCGCATC 62.237 63.158 34.36 22.88 0.00 3.91
109 110 3.025619 GGCGCATCCGGAAATCTG 58.974 61.111 9.01 2.60 34.32 2.90
110 111 2.546494 GGCGCATCCGGAAATCTGG 61.546 63.158 9.01 1.58 43.86 3.86
117 118 4.110493 CGGAAATCTGGACGGAGC 57.890 61.111 0.00 0.00 0.00 4.70
118 119 1.521681 CGGAAATCTGGACGGAGCC 60.522 63.158 0.00 0.00 0.00 4.70
119 120 1.521681 GGAAATCTGGACGGAGCCG 60.522 63.158 7.48 7.48 46.03 5.52
120 121 1.515954 GAAATCTGGACGGAGCCGA 59.484 57.895 16.83 0.00 42.83 5.54
121 122 0.806492 GAAATCTGGACGGAGCCGAC 60.806 60.000 16.83 9.51 42.83 4.79
122 123 2.558554 AAATCTGGACGGAGCCGACG 62.559 60.000 16.83 0.00 42.83 5.12
126 127 4.814294 GGACGGAGCCGACGCATT 62.814 66.667 16.83 0.00 42.83 3.56
127 128 3.554692 GACGGAGCCGACGCATTG 61.555 66.667 16.83 0.00 42.83 2.82
130 131 2.202878 GGAGCCGACGCATTGCTA 60.203 61.111 7.12 0.00 34.99 3.49
131 132 1.595382 GGAGCCGACGCATTGCTAT 60.595 57.895 7.12 0.00 34.99 2.97
132 133 1.560860 GGAGCCGACGCATTGCTATC 61.561 60.000 7.12 3.56 34.99 2.08
133 134 1.560860 GAGCCGACGCATTGCTATCC 61.561 60.000 7.12 0.00 34.99 2.59
134 135 1.595382 GCCGACGCATTGCTATCCT 60.595 57.895 7.12 0.00 34.03 3.24
135 136 0.319555 GCCGACGCATTGCTATCCTA 60.320 55.000 7.12 0.00 34.03 2.94
136 137 1.872237 GCCGACGCATTGCTATCCTAA 60.872 52.381 7.12 0.00 34.03 2.69
137 138 2.479837 CCGACGCATTGCTATCCTAAA 58.520 47.619 7.12 0.00 0.00 1.85
138 139 3.067106 CCGACGCATTGCTATCCTAAAT 58.933 45.455 7.12 0.00 0.00 1.40
139 140 4.242475 CCGACGCATTGCTATCCTAAATA 58.758 43.478 7.12 0.00 0.00 1.40
140 141 4.688879 CCGACGCATTGCTATCCTAAATAA 59.311 41.667 7.12 0.00 0.00 1.40
141 142 5.178623 CCGACGCATTGCTATCCTAAATAAA 59.821 40.000 7.12 0.00 0.00 1.40
142 143 6.071463 CGACGCATTGCTATCCTAAATAAAC 58.929 40.000 7.12 0.00 0.00 2.01
143 144 6.292649 CGACGCATTGCTATCCTAAATAAACA 60.293 38.462 7.12 0.00 0.00 2.83
144 145 7.328277 ACGCATTGCTATCCTAAATAAACAA 57.672 32.000 7.12 0.00 0.00 2.83
145 146 7.767261 ACGCATTGCTATCCTAAATAAACAAA 58.233 30.769 7.12 0.00 0.00 2.83
146 147 8.247562 ACGCATTGCTATCCTAAATAAACAAAA 58.752 29.630 7.12 0.00 0.00 2.44
147 148 9.248291 CGCATTGCTATCCTAAATAAACAAAAT 57.752 29.630 7.12 0.00 0.00 1.82
165 166 9.977762 AAACAAAATATAGATAAAACGGACGTC 57.022 29.630 7.13 7.13 0.00 4.34
166 167 8.134905 ACAAAATATAGATAAAACGGACGTCC 57.865 34.615 25.28 25.28 0.00 4.79
167 168 7.765360 ACAAAATATAGATAAAACGGACGTCCA 59.235 33.333 32.80 14.71 35.14 4.02
168 169 8.770828 CAAAATATAGATAAAACGGACGTCCAT 58.229 33.333 32.80 17.77 35.14 3.41
169 170 8.897872 AAATATAGATAAAACGGACGTCCATT 57.102 30.769 32.80 23.21 35.14 3.16
170 171 8.897872 AATATAGATAAAACGGACGTCCATTT 57.102 30.769 32.80 30.09 32.09 2.32
171 172 4.939509 AGATAAAACGGACGTCCATTTG 57.060 40.909 30.91 20.70 31.08 2.32
172 173 4.571919 AGATAAAACGGACGTCCATTTGA 58.428 39.130 30.91 24.78 31.08 2.69
173 174 4.630069 AGATAAAACGGACGTCCATTTGAG 59.370 41.667 30.91 19.81 31.08 3.02
174 175 2.536761 AAACGGACGTCCATTTGAGA 57.463 45.000 32.80 0.00 29.29 3.27
175 176 2.762535 AACGGACGTCCATTTGAGAT 57.237 45.000 32.80 8.56 35.14 2.75
176 177 2.010145 ACGGACGTCCATTTGAGATG 57.990 50.000 32.80 16.06 35.14 2.90
177 178 1.290203 CGGACGTCCATTTGAGATGG 58.710 55.000 32.80 9.78 40.48 3.51
178 179 1.405526 CGGACGTCCATTTGAGATGGT 60.406 52.381 32.80 0.00 40.06 3.55
179 180 2.009774 GGACGTCCATTTGAGATGGTG 58.990 52.381 29.75 0.00 40.06 4.17
180 181 1.398390 GACGTCCATTTGAGATGGTGC 59.602 52.381 3.51 0.00 40.06 5.01
181 182 0.374758 CGTCCATTTGAGATGGTGCG 59.625 55.000 1.63 4.91 40.06 5.34
182 183 1.453155 GTCCATTTGAGATGGTGCGT 58.547 50.000 1.63 0.00 40.06 5.24
183 184 1.812571 GTCCATTTGAGATGGTGCGTT 59.187 47.619 1.63 0.00 40.06 4.84
184 185 1.811965 TCCATTTGAGATGGTGCGTTG 59.188 47.619 1.63 0.00 40.06 4.10
185 186 1.135315 CCATTTGAGATGGTGCGTTGG 60.135 52.381 0.00 0.00 34.56 3.77
186 187 1.811965 CATTTGAGATGGTGCGTTGGA 59.188 47.619 0.00 0.00 0.00 3.53
187 188 1.522668 TTTGAGATGGTGCGTTGGAG 58.477 50.000 0.00 0.00 0.00 3.86
188 189 0.396435 TTGAGATGGTGCGTTGGAGT 59.604 50.000 0.00 0.00 0.00 3.85
189 190 0.396435 TGAGATGGTGCGTTGGAGTT 59.604 50.000 0.00 0.00 0.00 3.01
190 191 0.798776 GAGATGGTGCGTTGGAGTTG 59.201 55.000 0.00 0.00 0.00 3.16
191 192 1.210155 GATGGTGCGTTGGAGTTGC 59.790 57.895 0.00 0.00 0.00 4.17
192 193 2.200170 GATGGTGCGTTGGAGTTGCC 62.200 60.000 0.00 0.00 37.10 4.52
193 194 3.670377 GGTGCGTTGGAGTTGCCC 61.670 66.667 0.00 0.00 34.97 5.36
194 195 2.594592 GTGCGTTGGAGTTGCCCT 60.595 61.111 0.00 0.00 34.97 5.19
195 196 2.594303 TGCGTTGGAGTTGCCCTG 60.594 61.111 0.00 0.00 34.97 4.45
196 197 2.281484 GCGTTGGAGTTGCCCTGA 60.281 61.111 0.00 0.00 34.97 3.86
197 198 2.328099 GCGTTGGAGTTGCCCTGAG 61.328 63.158 0.00 0.00 34.97 3.35
198 199 1.371183 CGTTGGAGTTGCCCTGAGA 59.629 57.895 0.00 0.00 34.97 3.27
199 200 0.036010 CGTTGGAGTTGCCCTGAGAT 60.036 55.000 0.00 0.00 34.97 2.75
200 201 1.743996 GTTGGAGTTGCCCTGAGATC 58.256 55.000 0.00 0.00 34.97 2.75
201 202 1.003580 GTTGGAGTTGCCCTGAGATCA 59.996 52.381 0.00 0.00 34.97 2.92
202 203 1.361204 TGGAGTTGCCCTGAGATCAA 58.639 50.000 0.00 0.00 34.97 2.57
203 204 1.280133 TGGAGTTGCCCTGAGATCAAG 59.720 52.381 0.00 0.00 34.97 3.02
204 205 1.407989 GGAGTTGCCCTGAGATCAAGG 60.408 57.143 7.37 7.37 0.00 3.61
205 206 0.622665 AGTTGCCCTGAGATCAAGGG 59.377 55.000 23.27 23.27 45.43 3.95
206 207 0.620556 GTTGCCCTGAGATCAAGGGA 59.379 55.000 29.05 15.70 45.50 4.20
207 208 0.914644 TTGCCCTGAGATCAAGGGAG 59.085 55.000 29.05 10.70 45.50 4.30
208 209 0.984961 TGCCCTGAGATCAAGGGAGG 60.985 60.000 29.05 11.65 45.50 4.30
209 210 0.692419 GCCCTGAGATCAAGGGAGGA 60.692 60.000 29.05 0.00 45.50 3.71
210 211 1.885049 CCCTGAGATCAAGGGAGGAA 58.115 55.000 23.23 0.00 45.50 3.36
211 212 2.416638 CCCTGAGATCAAGGGAGGAAT 58.583 52.381 23.23 0.00 45.50 3.01
212 213 2.782341 CCCTGAGATCAAGGGAGGAATT 59.218 50.000 23.23 0.00 45.50 2.17
213 214 3.203934 CCCTGAGATCAAGGGAGGAATTT 59.796 47.826 23.23 0.00 45.50 1.82
214 215 4.205587 CCTGAGATCAAGGGAGGAATTTG 58.794 47.826 6.58 0.00 0.00 2.32
215 216 4.080129 CCTGAGATCAAGGGAGGAATTTGA 60.080 45.833 6.58 0.00 0.00 2.69
216 217 5.503927 CTGAGATCAAGGGAGGAATTTGAA 58.496 41.667 0.00 0.00 0.00 2.69
217 218 6.083487 TGAGATCAAGGGAGGAATTTGAAT 57.917 37.500 0.00 0.00 0.00 2.57
218 219 6.496743 TGAGATCAAGGGAGGAATTTGAATT 58.503 36.000 0.00 0.00 0.00 2.17
219 220 6.955851 TGAGATCAAGGGAGGAATTTGAATTT 59.044 34.615 0.00 0.00 0.00 1.82
220 221 8.115384 TGAGATCAAGGGAGGAATTTGAATTTA 58.885 33.333 0.00 0.00 0.00 1.40
221 222 8.899887 AGATCAAGGGAGGAATTTGAATTTAA 57.100 30.769 0.00 0.00 0.00 1.52
222 223 9.325248 AGATCAAGGGAGGAATTTGAATTTAAA 57.675 29.630 0.00 0.00 0.00 1.52
223 224 9.942850 GATCAAGGGAGGAATTTGAATTTAAAA 57.057 29.630 0.00 0.00 0.00 1.52
237 238 7.588143 TGAATTTAAAATTAACATGCACCGG 57.412 32.000 0.00 0.00 0.00 5.28
238 239 6.091441 TGAATTTAAAATTAACATGCACCGGC 59.909 34.615 0.00 0.00 41.68 6.13
239 240 1.989430 AAAATTAACATGCACCGGCG 58.011 45.000 0.00 0.00 45.35 6.46
240 241 0.457681 AAATTAACATGCACCGGCGC 60.458 50.000 7.72 7.72 45.35 6.53
242 243 2.265073 ATTAACATGCACCGGCGCAC 62.265 55.000 21.35 0.00 46.56 5.34
259 260 2.575461 CGGAGTTGACCCGTACCC 59.425 66.667 0.00 0.00 41.91 3.69
260 261 2.575461 GGAGTTGACCCGTACCCG 59.425 66.667 0.00 0.00 0.00 5.28
261 262 2.278330 GGAGTTGACCCGTACCCGT 61.278 63.158 0.00 0.00 0.00 5.28
262 263 0.965363 GGAGTTGACCCGTACCCGTA 60.965 60.000 0.00 0.00 0.00 4.02
263 264 0.171231 GAGTTGACCCGTACCCGTAC 59.829 60.000 0.00 0.00 0.00 3.67
271 272 3.451250 GTACCCGTACGTTGCGTG 58.549 61.111 15.21 0.00 41.39 5.34
272 273 2.430582 TACCCGTACGTTGCGTGC 60.431 61.111 15.21 2.02 41.39 5.34
273 274 2.918345 TACCCGTACGTTGCGTGCT 61.918 57.895 15.21 0.00 41.39 4.40
274 275 2.801113 TACCCGTACGTTGCGTGCTC 62.801 60.000 15.21 0.00 41.39 4.26
275 276 2.731721 CCGTACGTTGCGTGCTCA 60.732 61.111 15.21 0.00 41.39 4.26
276 277 2.464189 CGTACGTTGCGTGCTCAC 59.536 61.111 7.22 0.00 41.39 3.51
277 278 2.014554 CGTACGTTGCGTGCTCACT 61.015 57.895 7.22 0.00 41.39 3.41
278 279 1.545614 CGTACGTTGCGTGCTCACTT 61.546 55.000 7.22 0.00 41.39 3.16
279 280 0.111266 GTACGTTGCGTGCTCACTTG 60.111 55.000 0.00 0.00 41.39 3.16
280 281 1.827315 TACGTTGCGTGCTCACTTGC 61.827 55.000 0.00 0.00 41.39 4.01
281 282 2.885676 CGTTGCGTGCTCACTTGCT 61.886 57.895 0.00 0.00 0.00 3.91
282 283 1.356624 GTTGCGTGCTCACTTGCTT 59.643 52.632 0.00 0.00 0.00 3.91
283 284 0.931662 GTTGCGTGCTCACTTGCTTG 60.932 55.000 0.00 0.00 0.00 4.01
284 285 2.428071 GCGTGCTCACTTGCTTGC 60.428 61.111 0.00 0.00 0.00 4.01
285 286 2.901292 GCGTGCTCACTTGCTTGCT 61.901 57.895 0.00 0.00 33.42 3.91
286 287 1.650912 CGTGCTCACTTGCTTGCTT 59.349 52.632 0.00 0.00 0.00 3.91
287 288 0.659417 CGTGCTCACTTGCTTGCTTG 60.659 55.000 0.00 0.00 0.00 4.01
288 289 0.938168 GTGCTCACTTGCTTGCTTGC 60.938 55.000 0.00 0.00 0.00 4.01
289 290 1.361271 GCTCACTTGCTTGCTTGCA 59.639 52.632 0.27 0.27 41.65 4.08
290 291 0.938168 GCTCACTTGCTTGCTTGCAC 60.938 55.000 3.81 0.00 43.20 4.57
291 292 0.659417 CTCACTTGCTTGCTTGCACG 60.659 55.000 3.81 5.29 43.20 5.34
292 293 1.659335 CACTTGCTTGCTTGCACGG 60.659 57.895 11.20 7.25 43.20 4.94
293 294 2.120909 ACTTGCTTGCTTGCACGGT 61.121 52.632 11.20 7.73 43.20 4.83
294 295 1.066257 CTTGCTTGCTTGCACGGTT 59.934 52.632 3.81 0.00 43.20 4.44
295 296 1.210545 CTTGCTTGCTTGCACGGTTG 61.211 55.000 3.81 0.00 43.20 3.77
306 307 2.750815 CACGGTTGCACCTAGCTAC 58.249 57.895 0.00 0.00 46.29 3.58
310 311 3.806591 GTTGCACCTAGCTACGTGA 57.193 52.632 22.31 8.37 45.94 4.35
311 312 2.074547 GTTGCACCTAGCTACGTGAA 57.925 50.000 22.31 12.28 45.94 3.18
312 313 2.409975 GTTGCACCTAGCTACGTGAAA 58.590 47.619 22.31 16.86 45.94 2.69
313 314 2.363788 TGCACCTAGCTACGTGAAAG 57.636 50.000 22.31 0.00 45.94 2.62
314 315 1.000145 GCACCTAGCTACGTGAAAGC 59.000 55.000 22.31 0.00 41.15 3.51
315 316 1.269166 CACCTAGCTACGTGAAAGCG 58.731 55.000 15.41 0.00 44.87 4.68
316 317 0.886563 ACCTAGCTACGTGAAAGCGT 59.113 50.000 0.00 0.00 44.87 5.07
317 318 1.269166 CCTAGCTACGTGAAAGCGTG 58.731 55.000 0.00 0.00 45.33 5.34
318 319 1.135489 CCTAGCTACGTGAAAGCGTGA 60.135 52.381 0.00 0.00 45.33 4.35
319 320 2.177977 CTAGCTACGTGAAAGCGTGAG 58.822 52.381 0.00 0.00 45.33 3.51
320 321 0.388649 AGCTACGTGAAAGCGTGAGG 60.389 55.000 0.00 0.00 45.33 3.86
321 322 0.388134 GCTACGTGAAAGCGTGAGGA 60.388 55.000 0.00 0.00 45.33 3.71
322 323 1.618861 CTACGTGAAAGCGTGAGGAG 58.381 55.000 0.00 0.00 45.33 3.69
323 324 1.199327 CTACGTGAAAGCGTGAGGAGA 59.801 52.381 0.00 0.00 45.33 3.71
324 325 0.318784 ACGTGAAAGCGTGAGGAGAC 60.319 55.000 0.00 0.00 43.99 3.36
325 326 0.318699 CGTGAAAGCGTGAGGAGACA 60.319 55.000 0.00 0.00 0.00 3.41
326 327 1.423395 GTGAAAGCGTGAGGAGACAG 58.577 55.000 0.00 0.00 0.00 3.51
327 328 0.318441 TGAAAGCGTGAGGAGACAGG 59.682 55.000 0.00 0.00 0.00 4.00
328 329 0.603569 GAAAGCGTGAGGAGACAGGA 59.396 55.000 0.00 0.00 0.00 3.86
329 330 0.318762 AAAGCGTGAGGAGACAGGAC 59.681 55.000 0.00 0.00 0.00 3.85
330 331 1.867919 AAGCGTGAGGAGACAGGACG 61.868 60.000 0.00 0.00 0.00 4.79
331 332 2.878429 CGTGAGGAGACAGGACGG 59.122 66.667 0.00 0.00 0.00 4.79
332 333 2.701780 CGTGAGGAGACAGGACGGG 61.702 68.421 0.00 0.00 0.00 5.28
333 334 1.304217 GTGAGGAGACAGGACGGGA 60.304 63.158 0.00 0.00 0.00 5.14
334 335 0.684805 GTGAGGAGACAGGACGGGAT 60.685 60.000 0.00 0.00 0.00 3.85
335 336 0.924090 TGAGGAGACAGGACGGGATA 59.076 55.000 0.00 0.00 0.00 2.59
336 337 1.133761 TGAGGAGACAGGACGGGATAG 60.134 57.143 0.00 0.00 0.00 2.08
337 338 0.186386 AGGAGACAGGACGGGATAGG 59.814 60.000 0.00 0.00 0.00 2.57
338 339 0.106116 GGAGACAGGACGGGATAGGT 60.106 60.000 0.00 0.00 0.00 3.08
339 340 1.320507 GAGACAGGACGGGATAGGTC 58.679 60.000 0.00 0.00 0.00 3.85
340 341 0.629596 AGACAGGACGGGATAGGTCA 59.370 55.000 0.00 0.00 36.12 4.02
341 342 1.218196 AGACAGGACGGGATAGGTCAT 59.782 52.381 0.00 0.00 36.12 3.06
342 343 2.445905 AGACAGGACGGGATAGGTCATA 59.554 50.000 0.00 0.00 36.12 2.15
343 344 2.557490 GACAGGACGGGATAGGTCATAC 59.443 54.545 0.00 0.00 36.12 2.39
344 345 2.177233 ACAGGACGGGATAGGTCATACT 59.823 50.000 0.00 0.00 36.12 2.12
345 346 2.820787 CAGGACGGGATAGGTCATACTC 59.179 54.545 0.00 0.00 36.12 2.59
346 347 2.169330 GGACGGGATAGGTCATACTCC 58.831 57.143 0.00 0.00 36.12 3.85
347 348 2.225066 GGACGGGATAGGTCATACTCCT 60.225 54.545 0.00 0.00 36.12 3.69
348 349 3.009916 GGACGGGATAGGTCATACTCCTA 59.990 52.174 0.00 0.00 41.08 2.94
349 350 4.263435 GACGGGATAGGTCATACTCCTAG 58.737 52.174 0.00 0.00 40.32 3.02
350 351 3.010361 ACGGGATAGGTCATACTCCTAGG 59.990 52.174 0.82 0.82 40.32 3.02
351 352 3.010361 CGGGATAGGTCATACTCCTAGGT 59.990 52.174 9.08 0.00 40.32 3.08
352 353 4.345854 GGGATAGGTCATACTCCTAGGTG 58.654 52.174 9.08 9.22 40.32 4.00
353 354 4.345854 GGATAGGTCATACTCCTAGGTGG 58.654 52.174 15.12 9.03 40.32 4.61
354 355 4.202695 GGATAGGTCATACTCCTAGGTGGT 60.203 50.000 15.12 13.93 40.32 4.16
355 356 5.014966 GGATAGGTCATACTCCTAGGTGGTA 59.985 48.000 15.12 15.45 40.32 3.25
356 357 4.456662 AGGTCATACTCCTAGGTGGTAG 57.543 50.000 15.12 4.79 37.07 3.18
366 367 2.220313 CTAGGTGGTAGGAGTCGTAGC 58.780 57.143 13.73 13.73 0.00 3.58
367 368 0.624785 AGGTGGTAGGAGTCGTAGCT 59.375 55.000 19.48 0.00 0.00 3.32
368 369 1.842562 AGGTGGTAGGAGTCGTAGCTA 59.157 52.381 19.48 0.00 0.00 3.32
369 370 2.240667 AGGTGGTAGGAGTCGTAGCTAA 59.759 50.000 19.48 1.69 0.00 3.09
370 371 2.617774 GGTGGTAGGAGTCGTAGCTAAG 59.382 54.545 19.48 0.00 0.00 2.18
371 372 3.277715 GTGGTAGGAGTCGTAGCTAAGT 58.722 50.000 19.48 0.00 0.00 2.24
372 373 4.446371 GTGGTAGGAGTCGTAGCTAAGTA 58.554 47.826 19.48 0.43 0.00 2.24
373 374 4.511082 GTGGTAGGAGTCGTAGCTAAGTAG 59.489 50.000 19.48 0.00 0.00 2.57
374 375 4.163078 TGGTAGGAGTCGTAGCTAAGTAGT 59.837 45.833 19.48 0.00 0.00 2.73
375 376 4.511082 GGTAGGAGTCGTAGCTAAGTAGTG 59.489 50.000 13.42 0.00 0.00 2.74
376 377 2.944349 AGGAGTCGTAGCTAAGTAGTGC 59.056 50.000 6.57 2.81 0.00 4.40
377 378 2.944349 GGAGTCGTAGCTAAGTAGTGCT 59.056 50.000 6.57 0.00 42.67 4.40
378 379 4.125703 GGAGTCGTAGCTAAGTAGTGCTA 58.874 47.826 6.57 0.00 40.35 3.49
379 380 4.211794 GGAGTCGTAGCTAAGTAGTGCTAG 59.788 50.000 6.57 0.00 41.67 3.42
380 381 4.768583 AGTCGTAGCTAAGTAGTGCTAGT 58.231 43.478 6.57 0.00 41.67 2.57
381 382 4.810491 AGTCGTAGCTAAGTAGTGCTAGTC 59.190 45.833 6.57 0.00 41.67 2.59
382 383 4.569966 GTCGTAGCTAAGTAGTGCTAGTCA 59.430 45.833 6.57 0.00 41.67 3.41
383 384 5.064452 GTCGTAGCTAAGTAGTGCTAGTCAA 59.936 44.000 6.57 0.00 41.67 3.18
384 385 5.064452 TCGTAGCTAAGTAGTGCTAGTCAAC 59.936 44.000 6.57 0.00 41.67 3.18
385 386 5.064962 CGTAGCTAAGTAGTGCTAGTCAACT 59.935 44.000 0.00 0.00 41.67 3.16
386 387 5.570234 AGCTAAGTAGTGCTAGTCAACTC 57.430 43.478 0.00 0.00 37.81 3.01
387 388 5.010933 AGCTAAGTAGTGCTAGTCAACTCA 58.989 41.667 0.00 0.00 37.81 3.41
388 389 5.096849 GCTAAGTAGTGCTAGTCAACTCAC 58.903 45.833 0.00 0.00 0.00 3.51
389 390 4.522722 AAGTAGTGCTAGTCAACTCACC 57.477 45.455 0.00 0.00 0.00 4.02
390 391 2.826725 AGTAGTGCTAGTCAACTCACCC 59.173 50.000 0.00 0.00 0.00 4.61
391 392 0.603569 AGTGCTAGTCAACTCACCCG 59.396 55.000 0.00 0.00 0.00 5.28
392 393 0.389948 GTGCTAGTCAACTCACCCGG 60.390 60.000 0.00 0.00 0.00 5.73
393 394 1.218316 GCTAGTCAACTCACCCGGG 59.782 63.158 22.25 22.25 0.00 5.73
394 395 1.218316 CTAGTCAACTCACCCGGGC 59.782 63.158 24.08 0.20 0.00 6.13
395 396 1.534476 TAGTCAACTCACCCGGGCA 60.534 57.895 24.08 6.45 0.00 5.36
396 397 1.823169 TAGTCAACTCACCCGGGCAC 61.823 60.000 24.08 5.88 0.00 5.01
397 398 4.308458 TCAACTCACCCGGGCACG 62.308 66.667 24.08 11.54 40.55 5.34
398 399 4.619227 CAACTCACCCGGGCACGT 62.619 66.667 24.08 12.30 38.78 4.49
399 400 2.918802 AACTCACCCGGGCACGTA 60.919 61.111 24.08 0.00 38.78 3.57
400 401 3.230522 AACTCACCCGGGCACGTAC 62.231 63.158 24.08 0.00 38.78 3.67
401 402 4.789075 CTCACCCGGGCACGTACG 62.789 72.222 24.08 15.01 38.78 3.67
426 427 2.346803 GTACTACGTACGACCACTCCA 58.653 52.381 24.41 0.00 29.20 3.86
427 428 2.119801 ACTACGTACGACCACTCCAT 57.880 50.000 24.41 0.00 0.00 3.41
428 429 2.440409 ACTACGTACGACCACTCCATT 58.560 47.619 24.41 0.00 0.00 3.16
429 430 2.163010 ACTACGTACGACCACTCCATTG 59.837 50.000 24.41 0.00 0.00 2.82
430 431 0.963962 ACGTACGACCACTCCATTGT 59.036 50.000 24.41 0.00 0.00 2.71
431 432 1.342174 ACGTACGACCACTCCATTGTT 59.658 47.619 24.41 0.00 0.00 2.83
432 433 2.224113 ACGTACGACCACTCCATTGTTT 60.224 45.455 24.41 0.00 0.00 2.83
433 434 2.803956 CGTACGACCACTCCATTGTTTT 59.196 45.455 10.44 0.00 0.00 2.43
434 435 3.249080 CGTACGACCACTCCATTGTTTTT 59.751 43.478 10.44 0.00 0.00 1.94
435 436 3.708563 ACGACCACTCCATTGTTTTTG 57.291 42.857 0.00 0.00 0.00 2.44
436 437 2.223711 ACGACCACTCCATTGTTTTTGC 60.224 45.455 0.00 0.00 0.00 3.68
437 438 2.034558 CGACCACTCCATTGTTTTTGCT 59.965 45.455 0.00 0.00 0.00 3.91
438 439 3.490761 CGACCACTCCATTGTTTTTGCTT 60.491 43.478 0.00 0.00 0.00 3.91
439 440 3.795877 ACCACTCCATTGTTTTTGCTTG 58.204 40.909 0.00 0.00 0.00 4.01
440 441 3.450457 ACCACTCCATTGTTTTTGCTTGA 59.550 39.130 0.00 0.00 0.00 3.02
441 442 3.803778 CCACTCCATTGTTTTTGCTTGAC 59.196 43.478 0.00 0.00 0.00 3.18
442 443 3.486841 CACTCCATTGTTTTTGCTTGACG 59.513 43.478 0.00 0.00 0.00 4.35
443 444 3.052036 CTCCATTGTTTTTGCTTGACGG 58.948 45.455 0.00 0.00 0.00 4.79
444 445 2.690497 TCCATTGTTTTTGCTTGACGGA 59.310 40.909 0.00 0.00 0.00 4.69
445 446 3.052036 CCATTGTTTTTGCTTGACGGAG 58.948 45.455 0.00 0.00 0.00 4.63
446 447 3.243367 CCATTGTTTTTGCTTGACGGAGA 60.243 43.478 0.00 0.00 0.00 3.71
447 448 3.691049 TTGTTTTTGCTTGACGGAGAG 57.309 42.857 0.00 0.00 0.00 3.20
448 449 1.946768 TGTTTTTGCTTGACGGAGAGG 59.053 47.619 0.00 0.00 0.00 3.69
449 450 2.218603 GTTTTTGCTTGACGGAGAGGA 58.781 47.619 0.00 0.00 0.00 3.71
450 451 1.878953 TTTTGCTTGACGGAGAGGAC 58.121 50.000 0.00 0.00 0.00 3.85
451 452 0.756294 TTTGCTTGACGGAGAGGACA 59.244 50.000 0.00 0.00 0.00 4.02
452 453 0.318441 TTGCTTGACGGAGAGGACAG 59.682 55.000 0.00 0.00 0.00 3.51
453 454 1.216710 GCTTGACGGAGAGGACAGG 59.783 63.158 0.00 0.00 0.00 4.00
454 455 1.893786 CTTGACGGAGAGGACAGGG 59.106 63.158 0.00 0.00 0.00 4.45
455 456 2.232298 CTTGACGGAGAGGACAGGGC 62.232 65.000 0.00 0.00 0.00 5.19
456 457 3.827898 GACGGAGAGGACAGGGCG 61.828 72.222 0.00 0.00 0.00 6.13
457 458 4.361971 ACGGAGAGGACAGGGCGA 62.362 66.667 0.00 0.00 0.00 5.54
458 459 3.068691 CGGAGAGGACAGGGCGAA 61.069 66.667 0.00 0.00 0.00 4.70
459 460 2.646175 CGGAGAGGACAGGGCGAAA 61.646 63.158 0.00 0.00 0.00 3.46
460 461 1.079057 GGAGAGGACAGGGCGAAAC 60.079 63.158 0.00 0.00 0.00 2.78
461 462 1.671742 GAGAGGACAGGGCGAAACA 59.328 57.895 0.00 0.00 0.00 2.83
462 463 0.390472 GAGAGGACAGGGCGAAACAG 60.390 60.000 0.00 0.00 0.00 3.16
463 464 1.122019 AGAGGACAGGGCGAAACAGT 61.122 55.000 0.00 0.00 0.00 3.55
464 465 0.606604 GAGGACAGGGCGAAACAGTA 59.393 55.000 0.00 0.00 0.00 2.74
465 466 0.608640 AGGACAGGGCGAAACAGTAG 59.391 55.000 0.00 0.00 0.00 2.57
466 467 0.320697 GGACAGGGCGAAACAGTAGT 59.679 55.000 0.00 0.00 0.00 2.73
467 468 1.672145 GGACAGGGCGAAACAGTAGTC 60.672 57.143 0.00 0.00 0.00 2.59
468 469 1.272769 GACAGGGCGAAACAGTAGTCT 59.727 52.381 0.00 0.00 0.00 3.24
469 470 2.490903 GACAGGGCGAAACAGTAGTCTA 59.509 50.000 0.00 0.00 0.00 2.59
470 471 2.230750 ACAGGGCGAAACAGTAGTCTAC 59.769 50.000 1.39 1.39 0.00 2.59
471 472 2.492484 CAGGGCGAAACAGTAGTCTACT 59.508 50.000 6.71 6.71 40.28 2.57
483 484 5.346181 AGTAGTCTACTGAATTGAAGGCC 57.654 43.478 11.88 0.00 37.69 5.19
484 485 3.252974 AGTCTACTGAATTGAAGGCCG 57.747 47.619 0.00 0.00 0.00 6.13
485 486 1.666189 GTCTACTGAATTGAAGGCCGC 59.334 52.381 0.00 0.00 0.00 6.53
486 487 1.017387 CTACTGAATTGAAGGCCGCC 58.983 55.000 0.00 0.00 0.00 6.13
487 488 0.742990 TACTGAATTGAAGGCCGCCG 60.743 55.000 3.05 0.00 0.00 6.46
488 489 3.401243 CTGAATTGAAGGCCGCCGC 62.401 63.158 3.05 0.69 0.00 6.53
489 490 3.134127 GAATTGAAGGCCGCCGCT 61.134 61.111 3.05 0.00 34.44 5.52
490 491 3.113386 GAATTGAAGGCCGCCGCTC 62.113 63.158 3.05 5.69 34.44 5.03
491 492 3.918253 AATTGAAGGCCGCCGCTCA 62.918 57.895 11.93 11.93 34.44 4.26
502 503 4.154347 CCGCTCAGGGAGAGGCAC 62.154 72.222 3.08 0.00 42.15 5.01
503 504 4.504916 CGCTCAGGGAGAGGCACG 62.505 72.222 0.00 0.00 44.86 5.34
504 505 4.828925 GCTCAGGGAGAGGCACGC 62.829 72.222 0.00 0.00 44.86 5.34
505 506 3.385384 CTCAGGGAGAGGCACGCA 61.385 66.667 0.00 0.00 40.84 5.24
506 507 3.655810 CTCAGGGAGAGGCACGCAC 62.656 68.421 0.00 0.00 40.84 5.34
507 508 4.007644 CAGGGAGAGGCACGCACA 62.008 66.667 0.00 0.00 0.00 4.57
508 509 4.008933 AGGGAGAGGCACGCACAC 62.009 66.667 0.00 0.00 0.00 3.82
509 510 4.008933 GGGAGAGGCACGCACACT 62.009 66.667 0.00 0.00 0.00 3.55
510 511 2.433318 GGAGAGGCACGCACACTC 60.433 66.667 0.00 0.00 0.00 3.51
511 512 2.340078 GAGAGGCACGCACACTCA 59.660 61.111 0.00 0.00 33.76 3.41
512 513 2.024319 GAGAGGCACGCACACTCAC 61.024 63.158 0.00 0.00 33.76 3.51
513 514 2.280119 GAGGCACGCACACTCACA 60.280 61.111 0.00 0.00 0.00 3.58
514 515 2.588877 AGGCACGCACACTCACAC 60.589 61.111 0.00 0.00 0.00 3.82
515 516 2.588877 GGCACGCACACTCACACT 60.589 61.111 0.00 0.00 0.00 3.55
516 517 2.598632 GGCACGCACACTCACACTC 61.599 63.158 0.00 0.00 0.00 3.51
517 518 1.882625 GCACGCACACTCACACTCA 60.883 57.895 0.00 0.00 0.00 3.41
518 519 1.927210 CACGCACACTCACACTCAC 59.073 57.895 0.00 0.00 0.00 3.51
519 520 0.805711 CACGCACACTCACACTCACA 60.806 55.000 0.00 0.00 0.00 3.58
520 521 0.806102 ACGCACACTCACACTCACAC 60.806 55.000 0.00 0.00 0.00 3.82
521 522 0.528466 CGCACACTCACACTCACACT 60.528 55.000 0.00 0.00 0.00 3.55
522 523 1.212616 GCACACTCACACTCACACTC 58.787 55.000 0.00 0.00 0.00 3.51
523 524 1.471501 GCACACTCACACTCACACTCA 60.472 52.381 0.00 0.00 0.00 3.41
527 528 2.103373 ACTCACACTCACACTCACACT 58.897 47.619 0.00 0.00 0.00 3.55
539 540 1.824852 ACTCACACTCACACTCACACA 59.175 47.619 0.00 0.00 0.00 3.72
542 543 2.159240 TCACACTCACACTCACACAGAC 60.159 50.000 0.00 0.00 0.00 3.51
554 555 0.882474 ACACAGACGTCAGAGGTAGC 59.118 55.000 19.50 0.00 0.00 3.58
562 563 0.462759 GTCAGAGGTAGCATGGGCAC 60.463 60.000 0.00 0.00 44.61 5.01
580 581 2.807622 GATGGTCATTTGGGCCGC 59.192 61.111 0.00 0.00 0.00 6.53
614 615 2.126071 ATTCGCGTGACCTCACCG 60.126 61.111 5.77 5.21 43.66 4.94
620 621 2.430367 GTGACCTCACCGGCCTTT 59.570 61.111 0.00 0.00 40.85 3.11
661 662 1.376683 CCTCACCGCCGAATTTCCA 60.377 57.895 0.00 0.00 0.00 3.53
667 679 1.644786 CCGCCGAATTTCCACTCCAC 61.645 60.000 0.00 0.00 0.00 4.02
672 684 1.003118 CGAATTTCCACTCCACCTCCA 59.997 52.381 0.00 0.00 0.00 3.86
676 688 2.044793 TTCCACTCCACCTCCATCTT 57.955 50.000 0.00 0.00 0.00 2.40
678 690 1.079490 TCCACTCCACCTCCATCTTCT 59.921 52.381 0.00 0.00 0.00 2.85
686 698 3.323403 CCACCTCCATCTTCTATCAGTCC 59.677 52.174 0.00 0.00 0.00 3.85
702 716 0.100861 GTCCGTAGCAGTAGCAGTCC 59.899 60.000 0.00 0.00 45.49 3.85
703 717 0.323087 TCCGTAGCAGTAGCAGTCCA 60.323 55.000 0.00 0.00 45.49 4.02
717 731 1.067283 CAGTCCATCAGTCACGAGCTT 60.067 52.381 0.00 0.00 0.00 3.74
719 733 1.996191 GTCCATCAGTCACGAGCTTTC 59.004 52.381 0.00 0.00 0.00 2.62
740 754 2.227089 CTTCCCCGTTCCTCACTCCG 62.227 65.000 0.00 0.00 0.00 4.63
779 809 3.813143 CACGCATTGCCATCGCCA 61.813 61.111 2.41 0.00 0.00 5.69
859 905 3.687125 TGTGACGTAGACATTCTCCTCT 58.313 45.455 0.00 0.00 33.41 3.69
874 920 2.512056 CTCCTCTCCTCTCCTTCCACTA 59.488 54.545 0.00 0.00 0.00 2.74
879 925 0.818296 CCTCTCCTTCCACTACACGG 59.182 60.000 0.00 0.00 0.00 4.94
897 943 2.176546 CACGCCACTCGCCATTTG 59.823 61.111 0.00 0.00 43.23 2.32
900 946 2.616330 CGCCACTCGCCATTTGTGT 61.616 57.895 0.00 0.00 0.00 3.72
901 947 1.210155 GCCACTCGCCATTTGTGTC 59.790 57.895 0.00 0.00 0.00 3.67
927 973 1.173444 ACGCTCTCACGGTCTCACTT 61.173 55.000 0.00 0.00 37.37 3.16
942 993 1.816835 TCACTTGCTACCACTACTCCG 59.183 52.381 0.00 0.00 0.00 4.63
1095 1148 4.722700 GCCACCACCAGGCGTCAT 62.723 66.667 0.00 0.00 43.15 3.06
1097 1150 2.747460 CACCACCAGGCGTCATGG 60.747 66.667 8.63 8.63 43.87 3.66
1199 1252 2.760385 GGAGGTCCCCGTCTCCAG 60.760 72.222 4.66 0.00 46.54 3.86
1232 1285 4.077184 CTGCCTCCGCGGTACCAA 62.077 66.667 27.15 3.71 38.08 3.67
1243 1306 1.546961 CGGTACCAACTCTCCTCTGT 58.453 55.000 13.54 0.00 0.00 3.41
1251 1316 4.164221 ACCAACTCTCCTCTGTTTCTTTCA 59.836 41.667 0.00 0.00 0.00 2.69
1257 1322 4.022762 TCTCCTCTGTTTCTTTCACTCTCG 60.023 45.833 0.00 0.00 0.00 4.04
1263 1328 2.071688 TTCTTTCACTCTCGCTCTGC 57.928 50.000 0.00 0.00 0.00 4.26
1277 1342 1.943116 CTCTGCCTGTGTCTCGGAGG 61.943 65.000 4.96 0.00 31.37 4.30
1278 1343 2.997315 TGCCTGTGTCTCGGAGGG 60.997 66.667 4.96 0.00 0.00 4.30
1279 1344 2.997897 GCCTGTGTCTCGGAGGGT 60.998 66.667 4.96 0.00 0.00 4.34
1282 1347 1.185618 CCTGTGTCTCGGAGGGTGAA 61.186 60.000 4.96 0.00 0.00 3.18
1286 1351 0.178973 TGTCTCGGAGGGTGAACTGA 60.179 55.000 4.96 0.00 0.00 3.41
1298 1363 1.455786 GTGAACTGACGACATTGTCCG 59.544 52.381 11.12 8.76 38.11 4.79
1315 1380 0.924090 CCGTGCTCGAATGCTTACTC 59.076 55.000 10.21 0.00 39.71 2.59
1332 1401 1.892819 CTCAGATGTGCTGGACCGGT 61.893 60.000 6.92 6.92 44.98 5.28
1335 1404 2.034066 ATGTGCTGGACCGGTTGG 59.966 61.111 9.42 3.00 42.84 3.77
1579 1652 4.208686 CCAGGCCGGTAGCGAGAC 62.209 72.222 17.33 8.26 45.17 3.36
1721 1800 4.039357 ACGCAGACGGACGACAGG 62.039 66.667 0.00 0.00 46.04 4.00
2243 2357 1.068832 GCTCGTCGTCGTACAATGCA 61.069 55.000 1.33 0.00 38.33 3.96
2263 2377 2.102252 CAGACAGGTAGGAGCTCAATCC 59.898 54.545 17.19 13.44 39.89 3.01
2294 2408 4.938080 AGAGATTATCTTACCGTGTGCTG 58.062 43.478 0.00 0.00 32.99 4.41
2342 2460 1.546029 GAGGGGGACAATGCAGAAAAC 59.454 52.381 0.00 0.00 0.00 2.43
2438 2558 1.933181 TGTTGTCTCTGTCAAACTGCG 59.067 47.619 0.00 0.00 0.00 5.18
2477 2597 2.512515 GTGCTGGATGCTCGACCC 60.513 66.667 0.00 0.00 43.37 4.46
2523 2649 5.851177 ACGTAGACAATTCAGAAAATTTGCG 59.149 36.000 0.00 0.00 0.00 4.85
2534 2660 3.557595 AGAAAATTTGCGATCTAGCCTCG 59.442 43.478 9.42 9.42 39.11 4.63
2561 2687 6.483640 ACTGAAAAGCTACTTTTGGAGTACTG 59.516 38.462 9.88 2.38 42.72 2.74
2562 2688 5.238650 TGAAAAGCTACTTTTGGAGTACTGC 59.761 40.000 7.56 7.56 42.72 4.40
2564 2690 2.561419 AGCTACTTTTGGAGTACTGCGA 59.439 45.455 10.02 4.90 37.20 5.10
2566 2692 3.368236 GCTACTTTTGGAGTACTGCGAAG 59.632 47.826 20.99 20.99 39.86 3.79
2567 2693 3.746045 ACTTTTGGAGTACTGCGAAGA 57.254 42.857 26.12 14.26 36.65 2.87
2568 2694 4.273148 ACTTTTGGAGTACTGCGAAGAT 57.727 40.909 26.12 13.94 36.65 2.40
2569 2695 5.401531 ACTTTTGGAGTACTGCGAAGATA 57.598 39.130 26.12 10.74 36.65 1.98
2570 2696 5.411781 ACTTTTGGAGTACTGCGAAGATAG 58.588 41.667 26.12 19.07 36.65 2.08
2571 2697 5.185249 ACTTTTGGAGTACTGCGAAGATAGA 59.815 40.000 26.12 10.16 36.65 1.98
2573 2699 6.954487 TTTGGAGTACTGCGAAGATAGATA 57.046 37.500 12.70 0.00 0.00 1.98
2574 2700 6.561737 TTGGAGTACTGCGAAGATAGATAG 57.438 41.667 10.02 0.00 0.00 2.08
2576 2702 6.477253 TGGAGTACTGCGAAGATAGATAGAT 58.523 40.000 10.02 0.00 0.00 1.98
2577 2703 6.372937 TGGAGTACTGCGAAGATAGATAGATG 59.627 42.308 10.02 0.00 0.00 2.90
2582 2741 6.242396 ACTGCGAAGATAGATAGATGTAGGT 58.758 40.000 0.00 0.00 0.00 3.08
2611 2770 6.620678 GCAGTAAAATGCAGAAAGATAACCA 58.379 36.000 0.00 0.00 45.77 3.67
2612 2771 7.090173 GCAGTAAAATGCAGAAAGATAACCAA 58.910 34.615 0.00 0.00 45.77 3.67
2613 2772 7.274250 GCAGTAAAATGCAGAAAGATAACCAAG 59.726 37.037 0.00 0.00 45.77 3.61
2624 2796 3.689347 AGATAACCAAGAATGTGCTGCA 58.311 40.909 0.00 0.00 0.00 4.41
2638 2810 1.890489 TGCTGCATGCTCATCTGTTTT 59.110 42.857 20.33 0.00 43.37 2.43
2699 2876 1.103803 CTTTGGCATGCAGAGCAGAT 58.896 50.000 21.36 0.00 43.65 2.90
2706 2883 4.128139 GCAGAGCAGATGCAGGAG 57.872 61.111 7.68 0.00 45.16 3.69
2765 2944 1.207339 CGAGATTGCTTGCGTTGCA 59.793 52.632 0.00 0.00 38.80 4.08
2779 2958 1.533129 CGTTGCACGATCTATCCACGA 60.533 52.381 3.04 0.00 46.05 4.35
2782 2961 1.474879 TGCACGATCTATCCACGAACA 59.525 47.619 0.00 0.00 0.00 3.18
2825 3008 8.256356 AGATAGCTATGCTCCTTTCTTTCTTA 57.744 34.615 11.94 0.00 40.44 2.10
3097 3324 2.413453 GGACTGACTGAATTCAGCGAAC 59.587 50.000 30.95 20.46 46.09 3.95
3105 3332 5.100751 CTGAATTCAGCGAACAAAACTCT 57.899 39.130 21.96 0.00 37.15 3.24
3122 3350 8.557029 ACAAAACTCTGCAAAACATACTAGTAC 58.443 33.333 4.31 0.00 0.00 2.73
3123 3351 8.774586 CAAAACTCTGCAAAACATACTAGTACT 58.225 33.333 4.31 0.00 0.00 2.73
3124 3352 9.991906 AAAACTCTGCAAAACATACTAGTACTA 57.008 29.630 4.31 1.89 0.00 1.82
3125 3353 8.983307 AACTCTGCAAAACATACTAGTACTAC 57.017 34.615 4.31 0.00 0.00 2.73
3126 3354 8.350852 ACTCTGCAAAACATACTAGTACTACT 57.649 34.615 4.31 0.00 0.00 2.57
3127 3355 9.458727 ACTCTGCAAAACATACTAGTACTACTA 57.541 33.333 4.31 0.00 0.00 1.82
3128 3356 9.719279 CTCTGCAAAACATACTAGTACTACTAC 57.281 37.037 4.31 0.00 0.00 2.73
3129 3357 9.234827 TCTGCAAAACATACTAGTACTACTACA 57.765 33.333 4.31 0.00 0.00 2.74
3130 3358 9.504710 CTGCAAAACATACTAGTACTACTACAG 57.495 37.037 4.31 4.71 0.00 2.74
3131 3359 9.017509 TGCAAAACATACTAGTACTACTACAGT 57.982 33.333 4.31 0.00 41.62 3.55
3179 3407 4.068282 CGCGTGCACTGCAGACTG 62.068 66.667 23.35 10.64 40.08 3.51
3180 3408 2.662857 GCGTGCACTGCAGACTGA 60.663 61.111 23.35 0.00 40.08 3.41
3181 3409 2.246739 GCGTGCACTGCAGACTGAA 61.247 57.895 23.35 0.00 40.08 3.02
3182 3410 1.566563 CGTGCACTGCAGACTGAAC 59.433 57.895 23.35 13.11 40.08 3.18
3224 3452 0.179153 CGAGCTCTTGCATCGACTCA 60.179 55.000 12.85 0.00 42.74 3.41
3302 3532 6.338146 TCACTTGTATCAAGGTGTATGTAGC 58.662 40.000 12.95 0.00 0.00 3.58
3307 3537 6.048509 TGTATCAAGGTGTATGTAGCATGTG 58.951 40.000 0.00 0.00 0.00 3.21
3308 3538 4.551702 TCAAGGTGTATGTAGCATGTGT 57.448 40.909 0.00 0.00 0.00 3.72
3309 3539 4.252878 TCAAGGTGTATGTAGCATGTGTG 58.747 43.478 0.00 0.00 0.00 3.82
3310 3540 3.981071 AGGTGTATGTAGCATGTGTGT 57.019 42.857 0.00 0.00 0.00 3.72
3311 3541 3.861840 AGGTGTATGTAGCATGTGTGTC 58.138 45.455 0.00 0.00 0.00 3.67
3364 3638 9.657121 TGTTTTCATTTGTTCAAACTTCAAAAC 57.343 25.926 17.41 17.41 35.28 2.43
3384 3658 0.033208 GAGGTTGCATCCATCCCCAA 60.033 55.000 16.12 0.00 32.27 4.12
3385 3659 0.638292 AGGTTGCATCCATCCCCAAT 59.362 50.000 16.12 0.00 32.27 3.16
3386 3660 1.008693 AGGTTGCATCCATCCCCAATT 59.991 47.619 16.12 0.00 32.27 2.32
3389 3663 0.105555 TGCATCCATCCCCAATTCCC 60.106 55.000 0.00 0.00 0.00 3.97
3391 3665 0.562177 CATCCATCCCCAATTCCCCA 59.438 55.000 0.00 0.00 0.00 4.96
3397 3671 2.645875 CCCCAATTCCCCACCCCAT 61.646 63.158 0.00 0.00 0.00 4.00
3410 3684 1.001974 CACCCCATCTTGTCTTGTCGA 59.998 52.381 0.00 0.00 0.00 4.20
3412 3686 2.093447 ACCCCATCTTGTCTTGTCGATC 60.093 50.000 0.00 0.00 0.00 3.69
3416 3690 4.363999 CCATCTTGTCTTGTCGATCCTAC 58.636 47.826 0.00 0.00 0.00 3.18
3430 3704 2.842645 TCCTACCTTGGACCTACTCC 57.157 55.000 0.00 0.00 39.97 3.85
3444 3718 1.898330 TACTCCCTTGCTCGCATGCA 61.898 55.000 19.57 4.02 41.65 3.96
3474 3748 4.357996 GACGCTTATAAAACTAGGACGCT 58.642 43.478 0.00 0.00 0.00 5.07
3476 3750 5.517904 ACGCTTATAAAACTAGGACGCTAG 58.482 41.667 0.00 0.00 0.00 3.42
3480 3754 7.806960 CGCTTATAAAACTAGGACGCTAGTAAT 59.193 37.037 3.53 2.21 39.04 1.89
3481 3755 9.127006 GCTTATAAAACTAGGACGCTAGTAATC 57.873 37.037 3.53 0.00 39.04 1.75
3491 3765 1.983972 GCTAGTAATCGGCGATCCTG 58.016 55.000 24.20 15.65 0.00 3.86
3492 3766 1.983972 CTAGTAATCGGCGATCCTGC 58.016 55.000 24.20 12.14 0.00 4.85
3515 3789 3.409856 GGCGATCCCATGTGAACG 58.590 61.111 3.53 3.53 34.14 3.95
3516 3790 1.153449 GGCGATCCCATGTGAACGA 60.153 57.895 11.78 0.00 32.95 3.85
3517 3791 0.532862 GGCGATCCCATGTGAACGAT 60.533 55.000 11.78 0.00 32.95 3.73
3518 3792 1.299541 GCGATCCCATGTGAACGATT 58.700 50.000 11.78 0.00 32.95 3.34
3519 3793 1.670811 GCGATCCCATGTGAACGATTT 59.329 47.619 11.78 0.00 32.95 2.17
3520 3794 2.869801 GCGATCCCATGTGAACGATTTA 59.130 45.455 11.78 0.00 32.95 1.40
3521 3795 3.498397 GCGATCCCATGTGAACGATTTAT 59.502 43.478 11.78 0.00 32.95 1.40
3522 3796 4.688879 GCGATCCCATGTGAACGATTTATA 59.311 41.667 11.78 0.00 32.95 0.98
3523 3797 5.178623 GCGATCCCATGTGAACGATTTATAA 59.821 40.000 11.78 0.00 32.95 0.98
3524 3798 6.618592 GCGATCCCATGTGAACGATTTATAAG 60.619 42.308 11.78 0.00 32.95 1.73
3525 3799 6.128553 CGATCCCATGTGAACGATTTATAAGG 60.129 42.308 1.66 0.00 32.95 2.69
3526 3800 5.373222 TCCCATGTGAACGATTTATAAGGG 58.627 41.667 0.00 0.00 0.00 3.95
3527 3801 5.131308 TCCCATGTGAACGATTTATAAGGGA 59.869 40.000 0.00 0.00 38.05 4.20
3528 3802 5.470098 CCCATGTGAACGATTTATAAGGGAG 59.530 44.000 0.00 0.00 33.23 4.30
3529 3803 5.049405 CCATGTGAACGATTTATAAGGGAGC 60.049 44.000 0.00 0.00 0.00 4.70
3530 3804 5.092554 TGTGAACGATTTATAAGGGAGCA 57.907 39.130 0.00 0.00 0.00 4.26
3531 3805 5.492895 TGTGAACGATTTATAAGGGAGCAA 58.507 37.500 0.00 0.00 0.00 3.91
3532 3806 5.941058 TGTGAACGATTTATAAGGGAGCAAA 59.059 36.000 0.00 0.00 0.00 3.68
3533 3807 6.431543 TGTGAACGATTTATAAGGGAGCAAAA 59.568 34.615 0.00 0.00 0.00 2.44
3534 3808 7.122055 TGTGAACGATTTATAAGGGAGCAAAAT 59.878 33.333 0.00 0.00 0.00 1.82
3535 3809 7.973944 GTGAACGATTTATAAGGGAGCAAAATT 59.026 33.333 0.00 0.00 0.00 1.82
3536 3810 7.973388 TGAACGATTTATAAGGGAGCAAAATTG 59.027 33.333 0.00 0.00 0.00 2.32
3537 3811 7.404671 ACGATTTATAAGGGAGCAAAATTGT 57.595 32.000 0.00 0.00 32.07 2.71
3538 3812 7.836842 ACGATTTATAAGGGAGCAAAATTGTT 58.163 30.769 0.00 0.00 32.70 2.83
3539 3813 7.973944 ACGATTTATAAGGGAGCAAAATTGTTC 59.026 33.333 1.81 1.81 37.64 3.18
3540 3814 7.165812 CGATTTATAAGGGAGCAAAATTGTTCG 59.834 37.037 4.29 0.00 39.02 3.95
3541 3815 2.438868 AAGGGAGCAAAATTGTTCGC 57.561 45.000 15.84 15.84 46.56 4.70
3544 3818 3.136808 GGGAGCAAAATTGTTCGCTAG 57.863 47.619 16.18 0.00 44.16 3.42
3545 3819 2.747446 GGGAGCAAAATTGTTCGCTAGA 59.253 45.455 16.18 0.00 44.16 2.43
3546 3820 3.181506 GGGAGCAAAATTGTTCGCTAGAG 60.182 47.826 16.18 0.00 44.16 2.43
3547 3821 3.684788 GGAGCAAAATTGTTCGCTAGAGA 59.315 43.478 0.00 0.00 39.02 3.10
3548 3822 4.154195 GGAGCAAAATTGTTCGCTAGAGAA 59.846 41.667 4.64 4.64 39.02 2.87
3549 3823 5.163713 GGAGCAAAATTGTTCGCTAGAGAAT 60.164 40.000 12.25 0.00 39.02 2.40
3550 3824 6.259550 AGCAAAATTGTTCGCTAGAGAATT 57.740 33.333 12.25 0.17 31.60 2.17
3551 3825 6.681777 AGCAAAATTGTTCGCTAGAGAATTT 58.318 32.000 12.25 6.36 34.47 1.82
3552 3826 7.816640 AGCAAAATTGTTCGCTAGAGAATTTA 58.183 30.769 12.25 1.84 33.14 1.40
3553 3827 7.965107 AGCAAAATTGTTCGCTAGAGAATTTAG 59.035 33.333 12.25 5.54 33.14 1.85
3554 3828 7.218963 GCAAAATTGTTCGCTAGAGAATTTAGG 59.781 37.037 12.25 6.60 33.14 2.69
3555 3829 5.993106 ATTGTTCGCTAGAGAATTTAGGC 57.007 39.130 12.25 0.00 32.25 3.93
3556 3830 3.793559 TGTTCGCTAGAGAATTTAGGCC 58.206 45.455 12.25 0.00 32.25 5.19
3557 3831 3.196901 TGTTCGCTAGAGAATTTAGGCCA 59.803 43.478 12.25 1.15 32.25 5.36
3558 3832 4.189231 GTTCGCTAGAGAATTTAGGCCAA 58.811 43.478 12.25 0.00 32.25 4.52
3559 3833 4.481368 TCGCTAGAGAATTTAGGCCAAA 57.519 40.909 5.01 3.96 0.00 3.28
3560 3834 5.036117 TCGCTAGAGAATTTAGGCCAAAT 57.964 39.130 5.01 6.42 38.54 2.32
3561 3835 5.057149 TCGCTAGAGAATTTAGGCCAAATC 58.943 41.667 5.01 0.00 35.74 2.17
3562 3836 4.816385 CGCTAGAGAATTTAGGCCAAATCA 59.184 41.667 5.01 0.00 35.74 2.57
3563 3837 5.296780 CGCTAGAGAATTTAGGCCAAATCAA 59.703 40.000 5.01 0.00 35.74 2.57
3564 3838 6.016777 CGCTAGAGAATTTAGGCCAAATCAAT 60.017 38.462 5.01 0.00 35.74 2.57
3565 3839 7.366513 GCTAGAGAATTTAGGCCAAATCAATC 58.633 38.462 5.01 8.15 35.74 2.67
3566 3840 7.230309 GCTAGAGAATTTAGGCCAAATCAATCT 59.770 37.037 5.01 13.83 35.74 2.40
3567 3841 7.579761 AGAGAATTTAGGCCAAATCAATCTC 57.420 36.000 19.93 19.93 37.83 2.75
3568 3842 7.352738 AGAGAATTTAGGCCAAATCAATCTCT 58.647 34.615 22.06 22.06 40.41 3.10
3569 3843 7.838193 AGAGAATTTAGGCCAAATCAATCTCTT 59.162 33.333 22.06 14.22 41.42 2.85
3570 3844 8.371571 AGAATTTAGGCCAAATCAATCTCTTT 57.628 30.769 5.01 0.00 35.74 2.52
3571 3845 8.819845 AGAATTTAGGCCAAATCAATCTCTTTT 58.180 29.630 5.01 0.00 35.74 2.27
3663 3937 7.399245 AACACCACAAAAGTAGTACAACAAT 57.601 32.000 2.52 0.00 0.00 2.71
3747 4021 5.344128 CGTTATAACGTGCTTCTACAGTTGT 59.656 40.000 26.15 0.00 46.63 3.32
3794 4080 7.919690 TGTCAGTGTCACAAAGAAAGAATAAG 58.080 34.615 5.62 0.00 0.00 1.73
3812 4098 8.831715 AGAATAAGCCAAAACAACAAAATAGG 57.168 30.769 0.00 0.00 0.00 2.57
3904 6500 2.024176 ACATAAGGCGCGAGTCAATT 57.976 45.000 12.10 0.00 38.99 2.32
4079 6681 1.492319 CCGTTTGAGTTGTCGCGGAA 61.492 55.000 6.13 0.00 37.30 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 3.799755 GTCATGGTTCACGCCGGC 61.800 66.667 19.07 19.07 0.00 6.13
7 8 3.124921 GGTCATGGTTCACGCCGG 61.125 66.667 0.00 0.00 0.00 6.13
8 9 3.487202 CGGTCATGGTTCACGCCG 61.487 66.667 0.00 0.00 0.00 6.46
9 10 1.964373 AACGGTCATGGTTCACGCC 60.964 57.895 0.00 0.00 0.00 5.68
10 11 1.206578 CAACGGTCATGGTTCACGC 59.793 57.895 0.00 0.00 0.00 5.34
11 12 0.511221 GACAACGGTCATGGTTCACG 59.489 55.000 0.00 0.00 43.73 4.35
21 22 8.395633 ACAAAAATATAGCTAATGACAACGGTC 58.604 33.333 0.00 0.00 44.57 4.79
22 23 8.276252 ACAAAAATATAGCTAATGACAACGGT 57.724 30.769 0.00 0.00 0.00 4.83
23 24 9.009327 CAACAAAAATATAGCTAATGACAACGG 57.991 33.333 0.00 0.00 0.00 4.44
24 25 8.523464 GCAACAAAAATATAGCTAATGACAACG 58.477 33.333 0.00 0.00 0.00 4.10
25 26 9.573133 AGCAACAAAAATATAGCTAATGACAAC 57.427 29.630 0.00 0.00 0.00 3.32
39 40 9.630098 TGCAAATTTTTCAAAGCAACAAAAATA 57.370 22.222 8.12 0.00 38.28 1.40
40 41 8.530269 TGCAAATTTTTCAAAGCAACAAAAAT 57.470 23.077 0.00 0.00 40.03 1.82
41 42 7.935338 TGCAAATTTTTCAAAGCAACAAAAA 57.065 24.000 0.00 0.00 34.41 1.94
42 43 7.411588 GCATGCAAATTTTTCAAAGCAACAAAA 60.412 29.630 14.21 0.00 35.45 2.44
43 44 6.034683 GCATGCAAATTTTTCAAAGCAACAAA 59.965 30.769 14.21 0.00 35.45 2.83
44 45 5.515626 GCATGCAAATTTTTCAAAGCAACAA 59.484 32.000 14.21 0.00 35.45 2.83
45 46 5.035443 GCATGCAAATTTTTCAAAGCAACA 58.965 33.333 14.21 0.00 35.45 3.33
46 47 5.035443 TGCATGCAAATTTTTCAAAGCAAC 58.965 33.333 20.30 6.73 35.45 4.17
47 48 5.244785 TGCATGCAAATTTTTCAAAGCAA 57.755 30.435 20.30 0.00 35.45 3.91
48 49 4.790123 GCTGCATGCAAATTTTTCAAAGCA 60.790 37.500 22.88 14.34 42.31 3.91
49 50 3.666797 GCTGCATGCAAATTTTTCAAAGC 59.333 39.130 22.88 12.83 42.31 3.51
50 51 4.223659 GGCTGCATGCAAATTTTTCAAAG 58.776 39.130 22.88 6.32 45.15 2.77
51 52 3.303857 CGGCTGCATGCAAATTTTTCAAA 60.304 39.130 22.88 0.00 45.15 2.69
52 53 2.223611 CGGCTGCATGCAAATTTTTCAA 59.776 40.909 22.88 0.00 45.15 2.69
53 54 1.799403 CGGCTGCATGCAAATTTTTCA 59.201 42.857 22.88 0.00 45.15 2.69
54 55 1.129064 CCGGCTGCATGCAAATTTTTC 59.871 47.619 22.88 5.32 45.15 2.29
55 56 1.158434 CCGGCTGCATGCAAATTTTT 58.842 45.000 22.88 0.00 45.15 1.94
56 57 0.321021 TCCGGCTGCATGCAAATTTT 59.679 45.000 22.88 0.00 45.15 1.82
57 58 0.390209 GTCCGGCTGCATGCAAATTT 60.390 50.000 22.88 0.00 45.15 1.82
58 59 1.216178 GTCCGGCTGCATGCAAATT 59.784 52.632 22.88 0.00 45.15 1.82
59 60 1.940883 CTGTCCGGCTGCATGCAAAT 61.941 55.000 22.88 0.00 45.15 2.32
60 61 2.596923 TGTCCGGCTGCATGCAAA 60.597 55.556 22.88 0.00 45.15 3.68
61 62 3.057548 CTGTCCGGCTGCATGCAA 61.058 61.111 22.88 2.88 45.15 4.08
81 82 3.236618 GATGCGCCGCCCGTATTTC 62.237 63.158 6.63 0.00 42.43 2.17
82 83 3.276846 GATGCGCCGCCCGTATTT 61.277 61.111 6.63 0.00 42.43 1.40
92 93 2.546494 CCAGATTTCCGGATGCGCC 61.546 63.158 4.15 0.00 0.00 6.53
93 94 1.523711 TCCAGATTTCCGGATGCGC 60.524 57.895 4.15 0.00 0.00 6.09
94 95 1.490693 CGTCCAGATTTCCGGATGCG 61.491 60.000 4.15 0.00 31.77 4.73
95 96 1.160329 CCGTCCAGATTTCCGGATGC 61.160 60.000 4.15 0.00 43.01 3.91
96 97 0.464036 TCCGTCCAGATTTCCGGATG 59.536 55.000 4.15 0.00 43.99 3.51
97 98 2.910579 TCCGTCCAGATTTCCGGAT 58.089 52.632 4.15 0.00 43.99 4.18
98 99 1.956629 GCTCCGTCCAGATTTCCGGA 61.957 60.000 0.00 0.00 46.44 5.14
99 100 1.521681 GCTCCGTCCAGATTTCCGG 60.522 63.158 0.00 0.00 41.75 5.14
100 101 1.521681 GGCTCCGTCCAGATTTCCG 60.522 63.158 0.00 0.00 0.00 4.30
101 102 1.521681 CGGCTCCGTCCAGATTTCC 60.522 63.158 0.00 0.00 34.35 3.13
102 103 0.806492 GTCGGCTCCGTCCAGATTTC 60.806 60.000 8.28 0.00 40.74 2.17
103 104 1.218316 GTCGGCTCCGTCCAGATTT 59.782 57.895 8.28 0.00 40.74 2.17
104 105 2.893398 GTCGGCTCCGTCCAGATT 59.107 61.111 8.28 0.00 40.74 2.40
105 106 3.518998 CGTCGGCTCCGTCCAGAT 61.519 66.667 8.28 0.00 40.74 2.90
109 110 4.814294 AATGCGTCGGCTCCGTCC 62.814 66.667 8.28 0.00 40.82 4.79
110 111 3.554692 CAATGCGTCGGCTCCGTC 61.555 66.667 8.28 1.75 40.82 4.79
113 114 1.560860 GATAGCAATGCGTCGGCTCC 61.561 60.000 8.19 0.16 40.82 4.70
114 115 1.560860 GGATAGCAATGCGTCGGCTC 61.561 60.000 8.19 0.00 40.82 4.70
115 116 1.595382 GGATAGCAATGCGTCGGCT 60.595 57.895 9.65 9.65 40.82 5.52
116 117 0.319555 TAGGATAGCAATGCGTCGGC 60.320 55.000 0.00 0.00 40.52 5.54
117 118 2.148916 TTAGGATAGCAATGCGTCGG 57.851 50.000 0.00 0.00 0.00 4.79
118 119 5.839262 TTATTTAGGATAGCAATGCGTCG 57.161 39.130 0.00 0.00 0.00 5.12
119 120 6.954944 TGTTTATTTAGGATAGCAATGCGTC 58.045 36.000 0.00 2.18 0.00 5.19
120 121 6.935741 TGTTTATTTAGGATAGCAATGCGT 57.064 33.333 0.00 0.00 0.00 5.24
121 122 8.627487 TTTTGTTTATTTAGGATAGCAATGCG 57.373 30.769 0.00 0.00 0.00 4.73
139 140 9.977762 GACGTCCGTTTTATCTATATTTTGTTT 57.022 29.630 3.51 0.00 0.00 2.83
140 141 8.606602 GGACGTCCGTTTTATCTATATTTTGTT 58.393 33.333 20.85 0.00 0.00 2.83
141 142 7.765360 TGGACGTCCGTTTTATCTATATTTTGT 59.235 33.333 28.70 0.00 39.43 2.83
142 143 8.133754 TGGACGTCCGTTTTATCTATATTTTG 57.866 34.615 28.70 0.00 39.43 2.44
143 144 8.897872 ATGGACGTCCGTTTTATCTATATTTT 57.102 30.769 28.70 0.00 39.43 1.82
144 145 8.897872 AATGGACGTCCGTTTTATCTATATTT 57.102 30.769 31.94 9.38 42.31 1.40
156 157 2.346803 CATCTCAAATGGACGTCCGTT 58.653 47.619 31.94 31.94 46.66 4.44
157 158 1.405526 CCATCTCAAATGGACGTCCGT 60.406 52.381 28.70 26.41 41.64 4.69
158 159 1.290203 CCATCTCAAATGGACGTCCG 58.710 55.000 28.70 15.04 41.64 4.79
159 160 2.009774 CACCATCTCAAATGGACGTCC 58.990 52.381 28.17 28.17 41.64 4.79
160 161 1.398390 GCACCATCTCAAATGGACGTC 59.602 52.381 7.13 7.13 41.64 4.34
161 162 1.453155 GCACCATCTCAAATGGACGT 58.547 50.000 10.91 0.00 41.64 4.34
162 163 0.374758 CGCACCATCTCAAATGGACG 59.625 55.000 10.91 9.71 41.64 4.79
163 164 1.453155 ACGCACCATCTCAAATGGAC 58.547 50.000 10.91 2.18 41.64 4.02
164 165 1.811965 CAACGCACCATCTCAAATGGA 59.188 47.619 10.91 0.00 41.64 3.41
165 166 1.135315 CCAACGCACCATCTCAAATGG 60.135 52.381 2.52 2.52 44.54 3.16
166 167 1.811965 TCCAACGCACCATCTCAAATG 59.188 47.619 0.00 0.00 0.00 2.32
167 168 2.086869 CTCCAACGCACCATCTCAAAT 58.913 47.619 0.00 0.00 0.00 2.32
168 169 1.202758 ACTCCAACGCACCATCTCAAA 60.203 47.619 0.00 0.00 0.00 2.69
169 170 0.396435 ACTCCAACGCACCATCTCAA 59.604 50.000 0.00 0.00 0.00 3.02
170 171 0.396435 AACTCCAACGCACCATCTCA 59.604 50.000 0.00 0.00 0.00 3.27
171 172 0.798776 CAACTCCAACGCACCATCTC 59.201 55.000 0.00 0.00 0.00 2.75
172 173 1.237285 GCAACTCCAACGCACCATCT 61.237 55.000 0.00 0.00 0.00 2.90
173 174 1.210155 GCAACTCCAACGCACCATC 59.790 57.895 0.00 0.00 0.00 3.51
174 175 2.268076 GGCAACTCCAACGCACCAT 61.268 57.895 0.00 0.00 34.01 3.55
175 176 2.904866 GGCAACTCCAACGCACCA 60.905 61.111 0.00 0.00 34.01 4.17
176 177 3.670377 GGGCAACTCCAACGCACC 61.670 66.667 0.00 0.00 36.21 5.01
177 178 2.594592 AGGGCAACTCCAACGCAC 60.595 61.111 0.00 0.00 36.21 5.34
178 179 2.594303 CAGGGCAACTCCAACGCA 60.594 61.111 0.00 0.00 36.21 5.24
179 180 2.281484 TCAGGGCAACTCCAACGC 60.281 61.111 0.00 0.00 36.21 4.84
180 181 0.036010 ATCTCAGGGCAACTCCAACG 60.036 55.000 0.00 0.00 36.21 4.10
181 182 1.003580 TGATCTCAGGGCAACTCCAAC 59.996 52.381 0.00 0.00 36.21 3.77
182 183 1.361204 TGATCTCAGGGCAACTCCAA 58.639 50.000 0.00 0.00 36.21 3.53
183 184 1.280133 CTTGATCTCAGGGCAACTCCA 59.720 52.381 0.00 0.00 36.21 3.86
184 185 1.407989 CCTTGATCTCAGGGCAACTCC 60.408 57.143 4.06 0.00 36.28 3.85
185 186 1.407989 CCCTTGATCTCAGGGCAACTC 60.408 57.143 15.44 0.00 41.31 3.01
186 187 0.622665 CCCTTGATCTCAGGGCAACT 59.377 55.000 15.44 0.00 41.31 3.16
187 188 0.620556 TCCCTTGATCTCAGGGCAAC 59.379 55.000 20.62 0.00 41.31 4.17
188 189 0.914644 CTCCCTTGATCTCAGGGCAA 59.085 55.000 20.62 8.19 41.31 4.52
189 190 0.984961 CCTCCCTTGATCTCAGGGCA 60.985 60.000 20.62 11.67 41.31 5.36
190 191 0.692419 TCCTCCCTTGATCTCAGGGC 60.692 60.000 20.62 0.00 41.31 5.19
191 192 1.885049 TTCCTCCCTTGATCTCAGGG 58.115 55.000 19.76 19.76 42.20 4.45
192 193 4.080129 TCAAATTCCTCCCTTGATCTCAGG 60.080 45.833 4.86 4.86 0.00 3.86
193 194 5.108187 TCAAATTCCTCCCTTGATCTCAG 57.892 43.478 0.00 0.00 0.00 3.35
194 195 5.519183 TTCAAATTCCTCCCTTGATCTCA 57.481 39.130 0.00 0.00 0.00 3.27
195 196 7.415592 AAATTCAAATTCCTCCCTTGATCTC 57.584 36.000 0.00 0.00 0.00 2.75
196 197 8.899887 TTAAATTCAAATTCCTCCCTTGATCT 57.100 30.769 0.00 0.00 0.00 2.75
197 198 9.942850 TTTTAAATTCAAATTCCTCCCTTGATC 57.057 29.630 0.00 0.00 0.00 2.92
211 212 8.499162 CCGGTGCATGTTAATTTTAAATTCAAA 58.501 29.630 6.17 0.00 0.00 2.69
212 213 7.360438 GCCGGTGCATGTTAATTTTAAATTCAA 60.360 33.333 6.17 0.00 37.47 2.69
213 214 6.091441 GCCGGTGCATGTTAATTTTAAATTCA 59.909 34.615 6.17 0.59 37.47 2.57
214 215 6.474364 GCCGGTGCATGTTAATTTTAAATTC 58.526 36.000 6.17 0.00 37.47 2.17
215 216 5.062809 CGCCGGTGCATGTTAATTTTAAATT 59.937 36.000 0.00 8.07 37.32 1.82
216 217 4.564769 CGCCGGTGCATGTTAATTTTAAAT 59.435 37.500 0.00 0.00 37.32 1.40
217 218 3.921021 CGCCGGTGCATGTTAATTTTAAA 59.079 39.130 0.00 0.00 37.32 1.52
218 219 3.502920 CGCCGGTGCATGTTAATTTTAA 58.497 40.909 0.00 0.00 37.32 1.52
219 220 2.732597 GCGCCGGTGCATGTTAATTTTA 60.733 45.455 34.26 0.00 37.32 1.52
220 221 1.989430 CGCCGGTGCATGTTAATTTT 58.011 45.000 0.00 0.00 37.32 1.82
221 222 0.457681 GCGCCGGTGCATGTTAATTT 60.458 50.000 34.26 0.00 37.32 1.82
222 223 1.138671 GCGCCGGTGCATGTTAATT 59.861 52.632 34.26 0.00 37.32 1.40
223 224 2.043405 TGCGCCGGTGCATGTTAAT 61.043 52.632 37.64 0.00 40.62 1.40
224 225 2.669910 TGCGCCGGTGCATGTTAA 60.670 55.556 37.64 15.38 40.62 2.01
243 244 0.965363 TACGGGTACGGGTCAACTCC 60.965 60.000 0.00 0.00 46.48 3.85
244 245 0.171231 GTACGGGTACGGGTCAACTC 59.829 60.000 0.00 0.00 46.48 3.01
245 246 2.267045 GTACGGGTACGGGTCAACT 58.733 57.895 0.00 0.00 46.48 3.16
246 247 4.889427 GTACGGGTACGGGTCAAC 57.111 61.111 0.00 0.00 46.48 3.18
254 255 2.719774 GCACGCAACGTACGGGTAC 61.720 63.158 21.06 5.03 38.32 3.34
255 256 2.430582 GCACGCAACGTACGGGTA 60.431 61.111 21.06 0.00 38.32 3.69
256 257 4.289245 AGCACGCAACGTACGGGT 62.289 61.111 21.06 8.85 38.32 5.28
257 258 3.475774 GAGCACGCAACGTACGGG 61.476 66.667 21.06 12.41 38.32 5.28
258 259 2.731721 TGAGCACGCAACGTACGG 60.732 61.111 21.06 3.45 38.32 4.02
259 260 1.545614 AAGTGAGCACGCAACGTACG 61.546 55.000 15.01 15.01 38.32 3.67
260 261 0.111266 CAAGTGAGCACGCAACGTAC 60.111 55.000 0.00 0.00 38.32 3.67
261 262 1.827315 GCAAGTGAGCACGCAACGTA 61.827 55.000 0.00 0.00 38.32 3.57
262 263 3.014036 CAAGTGAGCACGCAACGT 58.986 55.556 0.00 0.00 42.36 3.99
263 264 2.378945 AAGCAAGTGAGCACGCAACG 62.379 55.000 0.00 0.00 36.85 4.10
264 265 0.931662 CAAGCAAGTGAGCACGCAAC 60.932 55.000 0.00 0.00 36.85 4.17
265 266 1.356270 CAAGCAAGTGAGCACGCAA 59.644 52.632 0.00 0.00 36.85 4.85
266 267 3.024784 CAAGCAAGTGAGCACGCA 58.975 55.556 0.00 0.00 36.85 5.24
267 268 2.398128 AAGCAAGCAAGTGAGCACGC 62.398 55.000 0.00 0.00 36.85 5.34
268 269 0.659417 CAAGCAAGCAAGTGAGCACG 60.659 55.000 0.00 0.00 36.85 5.34
269 270 0.938168 GCAAGCAAGCAAGTGAGCAC 60.938 55.000 0.00 0.00 36.85 4.40
270 271 1.361271 GCAAGCAAGCAAGTGAGCA 59.639 52.632 0.00 0.00 36.85 4.26
271 272 1.361271 TGCAAGCAAGCAAGTGAGC 59.639 52.632 0.17 0.00 42.46 4.26
278 279 2.412525 CAACCGTGCAAGCAAGCA 59.587 55.556 0.00 0.00 43.35 3.91
292 293 2.074547 TTCACGTAGCTAGGTGCAAC 57.925 50.000 32.10 6.12 45.94 4.17
293 294 2.683968 CTTTCACGTAGCTAGGTGCAA 58.316 47.619 32.10 27.73 45.94 4.08
294 295 1.671850 GCTTTCACGTAGCTAGGTGCA 60.672 52.381 32.10 23.69 45.94 4.57
295 296 1.000145 GCTTTCACGTAGCTAGGTGC 59.000 55.000 32.10 21.25 40.71 5.01
296 297 1.269166 CGCTTTCACGTAGCTAGGTG 58.731 55.000 31.43 31.43 41.87 4.00
297 298 0.886563 ACGCTTTCACGTAGCTAGGT 59.113 50.000 13.22 13.22 46.19 3.08
298 299 1.135489 TCACGCTTTCACGTAGCTAGG 60.135 52.381 11.82 11.82 46.34 3.02
299 300 2.177977 CTCACGCTTTCACGTAGCTAG 58.822 52.381 7.19 0.17 46.34 3.42
300 301 1.135489 CCTCACGCTTTCACGTAGCTA 60.135 52.381 7.19 0.00 46.34 3.32
301 302 0.388649 CCTCACGCTTTCACGTAGCT 60.389 55.000 7.19 0.00 46.34 3.32
302 303 0.388134 TCCTCACGCTTTCACGTAGC 60.388 55.000 0.00 0.00 46.34 3.58
303 304 1.199327 TCTCCTCACGCTTTCACGTAG 59.801 52.381 0.00 0.00 46.34 3.51
304 305 1.068748 GTCTCCTCACGCTTTCACGTA 60.069 52.381 0.00 0.00 46.34 3.57
306 307 0.318699 TGTCTCCTCACGCTTTCACG 60.319 55.000 0.00 0.00 39.50 4.35
307 308 1.423395 CTGTCTCCTCACGCTTTCAC 58.577 55.000 0.00 0.00 0.00 3.18
308 309 0.318441 CCTGTCTCCTCACGCTTTCA 59.682 55.000 0.00 0.00 0.00 2.69
309 310 0.603569 TCCTGTCTCCTCACGCTTTC 59.396 55.000 0.00 0.00 0.00 2.62
310 311 0.318762 GTCCTGTCTCCTCACGCTTT 59.681 55.000 0.00 0.00 0.00 3.51
311 312 1.867919 CGTCCTGTCTCCTCACGCTT 61.868 60.000 0.00 0.00 0.00 4.68
312 313 2.336478 CGTCCTGTCTCCTCACGCT 61.336 63.158 0.00 0.00 0.00 5.07
313 314 2.179517 CGTCCTGTCTCCTCACGC 59.820 66.667 0.00 0.00 0.00 5.34
314 315 2.701780 CCCGTCCTGTCTCCTCACG 61.702 68.421 0.00 0.00 0.00 4.35
315 316 0.684805 ATCCCGTCCTGTCTCCTCAC 60.685 60.000 0.00 0.00 0.00 3.51
316 317 0.924090 TATCCCGTCCTGTCTCCTCA 59.076 55.000 0.00 0.00 0.00 3.86
317 318 1.611519 CTATCCCGTCCTGTCTCCTC 58.388 60.000 0.00 0.00 0.00 3.71
318 319 0.186386 CCTATCCCGTCCTGTCTCCT 59.814 60.000 0.00 0.00 0.00 3.69
319 320 0.106116 ACCTATCCCGTCCTGTCTCC 60.106 60.000 0.00 0.00 0.00 3.71
320 321 1.320507 GACCTATCCCGTCCTGTCTC 58.679 60.000 0.00 0.00 0.00 3.36
321 322 0.629596 TGACCTATCCCGTCCTGTCT 59.370 55.000 0.00 0.00 0.00 3.41
322 323 1.705873 ATGACCTATCCCGTCCTGTC 58.294 55.000 0.00 0.00 0.00 3.51
323 324 2.177233 AGTATGACCTATCCCGTCCTGT 59.823 50.000 0.00 0.00 0.00 4.00
324 325 2.820787 GAGTATGACCTATCCCGTCCTG 59.179 54.545 0.00 0.00 0.00 3.86
325 326 2.225066 GGAGTATGACCTATCCCGTCCT 60.225 54.545 0.00 0.00 0.00 3.85
326 327 2.169330 GGAGTATGACCTATCCCGTCC 58.831 57.143 0.00 0.00 0.00 4.79
327 328 3.157750 AGGAGTATGACCTATCCCGTC 57.842 52.381 0.00 0.00 35.84 4.79
328 329 3.010361 CCTAGGAGTATGACCTATCCCGT 59.990 52.174 1.05 0.00 38.98 5.28
329 330 3.010361 ACCTAGGAGTATGACCTATCCCG 59.990 52.174 17.98 0.00 38.98 5.14
330 331 4.345854 CACCTAGGAGTATGACCTATCCC 58.654 52.174 17.98 0.00 38.98 3.85
331 332 4.202695 ACCACCTAGGAGTATGACCTATCC 60.203 50.000 17.98 0.00 41.22 2.59
332 333 5.000570 ACCACCTAGGAGTATGACCTATC 57.999 47.826 17.98 0.00 41.22 2.08
333 334 5.015391 CCTACCACCTAGGAGTATGACCTAT 59.985 48.000 17.98 0.00 44.88 2.57
334 335 4.353191 CCTACCACCTAGGAGTATGACCTA 59.647 50.000 17.98 0.00 44.88 3.08
335 336 3.140519 CCTACCACCTAGGAGTATGACCT 59.859 52.174 17.98 0.00 44.88 3.85
336 337 3.139770 TCCTACCACCTAGGAGTATGACC 59.860 52.174 17.98 0.00 45.57 4.02
337 338 4.450305 TCCTACCACCTAGGAGTATGAC 57.550 50.000 17.98 0.00 45.57 3.06
345 346 2.848691 CTACGACTCCTACCACCTAGG 58.151 57.143 7.41 7.41 43.54 3.02
346 347 2.158784 AGCTACGACTCCTACCACCTAG 60.159 54.545 0.00 0.00 0.00 3.02
347 348 1.842562 AGCTACGACTCCTACCACCTA 59.157 52.381 0.00 0.00 0.00 3.08
348 349 0.624785 AGCTACGACTCCTACCACCT 59.375 55.000 0.00 0.00 0.00 4.00
349 350 2.338577 TAGCTACGACTCCTACCACC 57.661 55.000 0.00 0.00 0.00 4.61
350 351 3.277715 ACTTAGCTACGACTCCTACCAC 58.722 50.000 3.94 0.00 0.00 4.16
351 352 3.641434 ACTTAGCTACGACTCCTACCA 57.359 47.619 3.94 0.00 0.00 3.25
352 353 4.511082 CACTACTTAGCTACGACTCCTACC 59.489 50.000 3.94 0.00 0.00 3.18
353 354 4.024977 GCACTACTTAGCTACGACTCCTAC 60.025 50.000 3.94 0.00 0.00 3.18
354 355 4.125703 GCACTACTTAGCTACGACTCCTA 58.874 47.826 3.94 0.00 0.00 2.94
355 356 2.944349 GCACTACTTAGCTACGACTCCT 59.056 50.000 3.94 0.00 0.00 3.69
356 357 2.944349 AGCACTACTTAGCTACGACTCC 59.056 50.000 3.94 0.00 39.78 3.85
357 358 4.810491 ACTAGCACTACTTAGCTACGACTC 59.190 45.833 3.94 0.00 42.05 3.36
358 359 4.768583 ACTAGCACTACTTAGCTACGACT 58.231 43.478 3.94 0.00 42.05 4.18
359 360 4.569966 TGACTAGCACTACTTAGCTACGAC 59.430 45.833 3.94 0.00 42.05 4.34
360 361 4.763073 TGACTAGCACTACTTAGCTACGA 58.237 43.478 3.94 0.00 42.05 3.43
361 362 5.064962 AGTTGACTAGCACTACTTAGCTACG 59.935 44.000 0.00 0.00 42.05 3.51
362 363 6.093771 TGAGTTGACTAGCACTACTTAGCTAC 59.906 42.308 0.00 0.00 42.05 3.58
363 364 6.093771 GTGAGTTGACTAGCACTACTTAGCTA 59.906 42.308 0.00 0.00 42.05 3.32
364 365 5.010933 TGAGTTGACTAGCACTACTTAGCT 58.989 41.667 0.00 0.00 44.55 3.32
365 366 5.096849 GTGAGTTGACTAGCACTACTTAGC 58.903 45.833 6.22 0.00 0.00 3.09
366 367 5.393243 GGGTGAGTTGACTAGCACTACTTAG 60.393 48.000 0.00 0.00 0.00 2.18
367 368 4.461781 GGGTGAGTTGACTAGCACTACTTA 59.538 45.833 0.00 1.20 0.00 2.24
368 369 3.258622 GGGTGAGTTGACTAGCACTACTT 59.741 47.826 0.00 0.00 0.00 2.24
369 370 2.826725 GGGTGAGTTGACTAGCACTACT 59.173 50.000 4.85 4.85 0.00 2.57
370 371 2.415625 CGGGTGAGTTGACTAGCACTAC 60.416 54.545 0.00 0.00 0.00 2.73
371 372 1.816835 CGGGTGAGTTGACTAGCACTA 59.183 52.381 0.00 0.00 0.00 2.74
372 373 0.603569 CGGGTGAGTTGACTAGCACT 59.396 55.000 0.00 0.00 0.00 4.40
373 374 0.389948 CCGGGTGAGTTGACTAGCAC 60.390 60.000 0.00 0.00 0.00 4.40
374 375 1.541310 CCCGGGTGAGTTGACTAGCA 61.541 60.000 14.18 0.00 0.00 3.49
375 376 1.218316 CCCGGGTGAGTTGACTAGC 59.782 63.158 14.18 0.00 0.00 3.42
376 377 1.218316 GCCCGGGTGAGTTGACTAG 59.782 63.158 24.63 0.00 0.00 2.57
377 378 1.534476 TGCCCGGGTGAGTTGACTA 60.534 57.895 24.63 0.00 0.00 2.59
378 379 2.847234 TGCCCGGGTGAGTTGACT 60.847 61.111 24.63 0.00 0.00 3.41
379 380 2.668550 GTGCCCGGGTGAGTTGAC 60.669 66.667 24.63 2.41 0.00 3.18
380 381 4.308458 CGTGCCCGGGTGAGTTGA 62.308 66.667 24.63 0.00 0.00 3.18
381 382 3.229156 TACGTGCCCGGGTGAGTTG 62.229 63.158 24.63 9.00 38.78 3.16
382 383 2.918802 TACGTGCCCGGGTGAGTT 60.919 61.111 24.63 5.64 38.78 3.01
383 384 3.688159 GTACGTGCCCGGGTGAGT 61.688 66.667 24.63 20.70 38.78 3.41
384 385 4.789075 CGTACGTGCCCGGGTGAG 62.789 72.222 24.63 15.76 38.78 3.51
407 408 2.760634 TGGAGTGGTCGTACGTAGTA 57.239 50.000 16.05 0.00 45.11 1.82
409 410 2.163010 ACAATGGAGTGGTCGTACGTAG 59.837 50.000 16.05 0.00 0.00 3.51
410 411 2.161855 ACAATGGAGTGGTCGTACGTA 58.838 47.619 16.05 0.00 0.00 3.57
411 412 0.963962 ACAATGGAGTGGTCGTACGT 59.036 50.000 16.05 0.00 0.00 3.57
412 413 2.074547 AACAATGGAGTGGTCGTACG 57.925 50.000 9.53 9.53 0.00 3.67
413 414 4.533222 CAAAAACAATGGAGTGGTCGTAC 58.467 43.478 0.00 0.00 0.00 3.67
414 415 3.003897 GCAAAAACAATGGAGTGGTCGTA 59.996 43.478 0.00 0.00 0.00 3.43
415 416 2.223711 GCAAAAACAATGGAGTGGTCGT 60.224 45.455 0.00 0.00 0.00 4.34
416 417 2.034558 AGCAAAAACAATGGAGTGGTCG 59.965 45.455 0.00 0.00 0.00 4.79
417 418 3.733443 AGCAAAAACAATGGAGTGGTC 57.267 42.857 0.00 0.00 0.00 4.02
418 419 3.450457 TCAAGCAAAAACAATGGAGTGGT 59.550 39.130 0.00 0.00 0.00 4.16
419 420 3.803778 GTCAAGCAAAAACAATGGAGTGG 59.196 43.478 0.00 0.00 0.00 4.00
420 421 3.486841 CGTCAAGCAAAAACAATGGAGTG 59.513 43.478 0.00 0.00 0.00 3.51
421 422 3.490761 CCGTCAAGCAAAAACAATGGAGT 60.491 43.478 0.00 0.00 0.00 3.85
422 423 3.052036 CCGTCAAGCAAAAACAATGGAG 58.948 45.455 0.00 0.00 0.00 3.86
423 424 2.690497 TCCGTCAAGCAAAAACAATGGA 59.310 40.909 0.00 0.00 0.00 3.41
424 425 3.052036 CTCCGTCAAGCAAAAACAATGG 58.948 45.455 0.00 0.00 0.00 3.16
425 426 3.963665 TCTCCGTCAAGCAAAAACAATG 58.036 40.909 0.00 0.00 0.00 2.82
426 427 3.004734 CCTCTCCGTCAAGCAAAAACAAT 59.995 43.478 0.00 0.00 0.00 2.71
427 428 2.357637 CCTCTCCGTCAAGCAAAAACAA 59.642 45.455 0.00 0.00 0.00 2.83
428 429 1.946768 CCTCTCCGTCAAGCAAAAACA 59.053 47.619 0.00 0.00 0.00 2.83
429 430 2.031944 GTCCTCTCCGTCAAGCAAAAAC 60.032 50.000 0.00 0.00 0.00 2.43
430 431 2.218603 GTCCTCTCCGTCAAGCAAAAA 58.781 47.619 0.00 0.00 0.00 1.94
431 432 1.140052 TGTCCTCTCCGTCAAGCAAAA 59.860 47.619 0.00 0.00 0.00 2.44
432 433 0.756294 TGTCCTCTCCGTCAAGCAAA 59.244 50.000 0.00 0.00 0.00 3.68
433 434 0.318441 CTGTCCTCTCCGTCAAGCAA 59.682 55.000 0.00 0.00 0.00 3.91
434 435 1.536073 CCTGTCCTCTCCGTCAAGCA 61.536 60.000 0.00 0.00 0.00 3.91
435 436 1.216710 CCTGTCCTCTCCGTCAAGC 59.783 63.158 0.00 0.00 0.00 4.01
436 437 1.893786 CCCTGTCCTCTCCGTCAAG 59.106 63.158 0.00 0.00 0.00 3.02
437 438 2.283529 GCCCTGTCCTCTCCGTCAA 61.284 63.158 0.00 0.00 0.00 3.18
438 439 2.680352 GCCCTGTCCTCTCCGTCA 60.680 66.667 0.00 0.00 0.00 4.35
439 440 3.827898 CGCCCTGTCCTCTCCGTC 61.828 72.222 0.00 0.00 0.00 4.79
440 441 3.881019 TTCGCCCTGTCCTCTCCGT 62.881 63.158 0.00 0.00 0.00 4.69
441 442 2.646175 TTTCGCCCTGTCCTCTCCG 61.646 63.158 0.00 0.00 0.00 4.63
442 443 1.079057 GTTTCGCCCTGTCCTCTCC 60.079 63.158 0.00 0.00 0.00 3.71
443 444 0.390472 CTGTTTCGCCCTGTCCTCTC 60.390 60.000 0.00 0.00 0.00 3.20
444 445 1.122019 ACTGTTTCGCCCTGTCCTCT 61.122 55.000 0.00 0.00 0.00 3.69
445 446 0.606604 TACTGTTTCGCCCTGTCCTC 59.393 55.000 0.00 0.00 0.00 3.71
446 447 0.608640 CTACTGTTTCGCCCTGTCCT 59.391 55.000 0.00 0.00 0.00 3.85
447 448 0.320697 ACTACTGTTTCGCCCTGTCC 59.679 55.000 0.00 0.00 0.00 4.02
448 449 1.272769 AGACTACTGTTTCGCCCTGTC 59.727 52.381 0.00 0.00 0.00 3.51
449 450 1.339097 AGACTACTGTTTCGCCCTGT 58.661 50.000 0.00 0.00 0.00 4.00
450 451 2.492484 AGTAGACTACTGTTTCGCCCTG 59.508 50.000 14.47 0.00 37.69 4.45
451 452 2.805194 AGTAGACTACTGTTTCGCCCT 58.195 47.619 14.47 0.00 37.69 5.19
461 462 4.142138 CGGCCTTCAATTCAGTAGACTACT 60.142 45.833 9.45 9.45 40.28 2.57
462 463 4.113354 CGGCCTTCAATTCAGTAGACTAC 58.887 47.826 0.00 4.32 0.00 2.73
463 464 3.430374 GCGGCCTTCAATTCAGTAGACTA 60.430 47.826 0.00 0.00 0.00 2.59
464 465 2.678190 GCGGCCTTCAATTCAGTAGACT 60.678 50.000 0.00 0.00 0.00 3.24
465 466 1.666189 GCGGCCTTCAATTCAGTAGAC 59.334 52.381 0.00 0.00 0.00 2.59
466 467 1.406887 GGCGGCCTTCAATTCAGTAGA 60.407 52.381 12.87 0.00 0.00 2.59
467 468 1.017387 GGCGGCCTTCAATTCAGTAG 58.983 55.000 12.87 0.00 0.00 2.57
468 469 0.742990 CGGCGGCCTTCAATTCAGTA 60.743 55.000 18.34 0.00 0.00 2.74
469 470 2.040544 CGGCGGCCTTCAATTCAGT 61.041 57.895 18.34 0.00 0.00 3.41
470 471 2.793946 CGGCGGCCTTCAATTCAG 59.206 61.111 18.34 0.00 0.00 3.02
471 472 3.439540 GCGGCGGCCTTCAATTCA 61.440 61.111 18.34 0.00 0.00 2.57
472 473 3.113386 GAGCGGCGGCCTTCAATTC 62.113 63.158 18.34 0.00 41.24 2.17
473 474 3.134127 GAGCGGCGGCCTTCAATT 61.134 61.111 18.34 0.00 41.24 2.32
474 475 4.408821 TGAGCGGCGGCCTTCAAT 62.409 61.111 18.34 0.00 41.24 2.57
485 486 4.154347 GTGCCTCTCCCTGAGCGG 62.154 72.222 0.00 0.00 41.35 5.52
486 487 4.504916 CGTGCCTCTCCCTGAGCG 62.505 72.222 0.00 0.00 41.35 5.03
487 488 4.828925 GCGTGCCTCTCCCTGAGC 62.829 72.222 0.00 0.00 41.35 4.26
488 489 3.385384 TGCGTGCCTCTCCCTGAG 61.385 66.667 0.00 0.00 42.30 3.35
489 490 3.695606 GTGCGTGCCTCTCCCTGA 61.696 66.667 0.00 0.00 0.00 3.86
490 491 4.007644 TGTGCGTGCCTCTCCCTG 62.008 66.667 0.00 0.00 0.00 4.45
491 492 4.008933 GTGTGCGTGCCTCTCCCT 62.009 66.667 0.00 0.00 0.00 4.20
492 493 3.941657 GAGTGTGCGTGCCTCTCCC 62.942 68.421 0.00 0.00 0.00 4.30
493 494 2.433318 GAGTGTGCGTGCCTCTCC 60.433 66.667 0.00 0.00 0.00 3.71
494 495 2.024319 GTGAGTGTGCGTGCCTCTC 61.024 63.158 0.00 0.00 0.00 3.20
495 496 2.029666 GTGAGTGTGCGTGCCTCT 59.970 61.111 0.00 0.00 0.00 3.69
496 497 2.280119 TGTGAGTGTGCGTGCCTC 60.280 61.111 0.00 0.00 0.00 4.70
497 498 2.588877 GTGTGAGTGTGCGTGCCT 60.589 61.111 0.00 0.00 0.00 4.75
498 499 2.588877 AGTGTGAGTGTGCGTGCC 60.589 61.111 0.00 0.00 0.00 5.01
499 500 1.882625 TGAGTGTGAGTGTGCGTGC 60.883 57.895 0.00 0.00 0.00 5.34
500 501 0.805711 TGTGAGTGTGAGTGTGCGTG 60.806 55.000 0.00 0.00 0.00 5.34
501 502 0.806102 GTGTGAGTGTGAGTGTGCGT 60.806 55.000 0.00 0.00 0.00 5.24
502 503 0.528466 AGTGTGAGTGTGAGTGTGCG 60.528 55.000 0.00 0.00 0.00 5.34
503 504 1.212616 GAGTGTGAGTGTGAGTGTGC 58.787 55.000 0.00 0.00 0.00 4.57
504 505 2.196749 GTGAGTGTGAGTGTGAGTGTG 58.803 52.381 0.00 0.00 0.00 3.82
505 506 1.824852 TGTGAGTGTGAGTGTGAGTGT 59.175 47.619 0.00 0.00 0.00 3.55
506 507 2.159184 AGTGTGAGTGTGAGTGTGAGTG 60.159 50.000 0.00 0.00 0.00 3.51
507 508 2.099921 GAGTGTGAGTGTGAGTGTGAGT 59.900 50.000 0.00 0.00 0.00 3.41
508 509 2.099756 TGAGTGTGAGTGTGAGTGTGAG 59.900 50.000 0.00 0.00 0.00 3.51
509 510 2.099405 TGAGTGTGAGTGTGAGTGTGA 58.901 47.619 0.00 0.00 0.00 3.58
510 511 2.196749 GTGAGTGTGAGTGTGAGTGTG 58.803 52.381 0.00 0.00 0.00 3.82
511 512 1.824852 TGTGAGTGTGAGTGTGAGTGT 59.175 47.619 0.00 0.00 0.00 3.55
512 513 2.159184 AGTGTGAGTGTGAGTGTGAGTG 60.159 50.000 0.00 0.00 0.00 3.51
513 514 2.099921 GAGTGTGAGTGTGAGTGTGAGT 59.900 50.000 0.00 0.00 0.00 3.41
514 515 2.099756 TGAGTGTGAGTGTGAGTGTGAG 59.900 50.000 0.00 0.00 0.00 3.51
515 516 2.099405 TGAGTGTGAGTGTGAGTGTGA 58.901 47.619 0.00 0.00 0.00 3.58
516 517 2.196749 GTGAGTGTGAGTGTGAGTGTG 58.803 52.381 0.00 0.00 0.00 3.82
517 518 1.824852 TGTGAGTGTGAGTGTGAGTGT 59.175 47.619 0.00 0.00 0.00 3.55
518 519 2.196749 GTGTGAGTGTGAGTGTGAGTG 58.803 52.381 0.00 0.00 0.00 3.51
519 520 1.824852 TGTGTGAGTGTGAGTGTGAGT 59.175 47.619 0.00 0.00 0.00 3.41
520 521 2.099756 TCTGTGTGAGTGTGAGTGTGAG 59.900 50.000 0.00 0.00 0.00 3.51
521 522 2.099405 TCTGTGTGAGTGTGAGTGTGA 58.901 47.619 0.00 0.00 0.00 3.58
522 523 2.196749 GTCTGTGTGAGTGTGAGTGTG 58.803 52.381 0.00 0.00 0.00 3.82
523 524 1.202302 CGTCTGTGTGAGTGTGAGTGT 60.202 52.381 0.00 0.00 0.00 3.55
527 528 1.065551 CTGACGTCTGTGTGAGTGTGA 59.934 52.381 17.92 0.00 0.00 3.58
539 540 1.107114 CCATGCTACCTCTGACGTCT 58.893 55.000 17.92 0.00 0.00 4.18
542 543 1.227380 GCCCATGCTACCTCTGACG 60.227 63.158 0.00 0.00 33.53 4.35
554 555 1.105457 AAATGACCATCGTGCCCATG 58.895 50.000 0.00 0.00 0.00 3.66
562 563 3.110139 CGGCCCAAATGACCATCG 58.890 61.111 0.00 0.00 0.00 3.84
661 662 4.222336 CTGATAGAAGATGGAGGTGGAGT 58.778 47.826 0.00 0.00 0.00 3.85
667 679 3.226777 ACGGACTGATAGAAGATGGAGG 58.773 50.000 0.00 0.00 0.00 4.30
672 684 4.465886 ACTGCTACGGACTGATAGAAGAT 58.534 43.478 6.10 0.00 29.69 2.40
676 688 3.139850 GCTACTGCTACGGACTGATAGA 58.860 50.000 0.00 0.00 36.03 1.98
678 690 2.879026 CTGCTACTGCTACGGACTGATA 59.121 50.000 0.00 0.00 40.48 2.15
686 698 1.405463 TGATGGACTGCTACTGCTACG 59.595 52.381 0.00 0.00 40.48 3.51
702 716 1.066573 AGGGAAAGCTCGTGACTGATG 60.067 52.381 0.00 0.00 0.00 3.07
703 717 1.270907 AGGGAAAGCTCGTGACTGAT 58.729 50.000 0.00 0.00 0.00 2.90
717 731 1.151987 TGAGGAACGGGGAAGGGAA 60.152 57.895 0.00 0.00 0.00 3.97
719 733 1.900545 GAGTGAGGAACGGGGAAGGG 61.901 65.000 0.00 0.00 0.00 3.95
820 866 3.203546 AAGTGTCGGGGTGTCGTCG 62.204 63.158 0.00 0.00 0.00 5.12
859 905 1.616187 CCGTGTAGTGGAAGGAGAGGA 60.616 57.143 0.00 0.00 0.00 3.71
879 925 3.737172 AAATGGCGAGTGGCGTGC 61.737 61.111 0.00 0.00 44.92 5.34
927 973 1.035932 GGAGCGGAGTAGTGGTAGCA 61.036 60.000 0.00 0.00 0.00 3.49
973 1026 3.708220 CTCGCTGAAGCTCCCGACC 62.708 68.421 0.10 0.00 39.32 4.79
974 1027 2.202676 CTCGCTGAAGCTCCCGAC 60.203 66.667 0.10 0.00 39.32 4.79
975 1028 3.452786 CCTCGCTGAAGCTCCCGA 61.453 66.667 0.10 0.00 39.32 5.14
978 1031 4.135153 TCGCCTCGCTGAAGCTCC 62.135 66.667 0.10 0.00 39.32 4.70
979 1032 2.581953 CTCGCCTCGCTGAAGCTC 60.582 66.667 0.10 0.00 39.32 4.09
1224 1277 1.546961 ACAGAGGAGAGTTGGTACCG 58.453 55.000 7.57 0.00 0.00 4.02
1231 1284 5.365314 AGAGTGAAAGAAACAGAGGAGAGTT 59.635 40.000 0.00 0.00 0.00 3.01
1232 1285 4.898861 AGAGTGAAAGAAACAGAGGAGAGT 59.101 41.667 0.00 0.00 0.00 3.24
1243 1306 2.408050 GCAGAGCGAGAGTGAAAGAAA 58.592 47.619 0.00 0.00 0.00 2.52
1251 1316 1.872197 GACACAGGCAGAGCGAGAGT 61.872 60.000 0.00 0.00 0.00 3.24
1257 1322 2.125753 CCGAGACACAGGCAGAGC 60.126 66.667 0.00 0.00 0.00 4.09
1263 1328 1.185618 TTCACCCTCCGAGACACAGG 61.186 60.000 0.00 0.00 0.00 4.00
1277 1342 1.798813 GGACAATGTCGTCAGTTCACC 59.201 52.381 7.35 0.00 37.66 4.02
1278 1343 1.455786 CGGACAATGTCGTCAGTTCAC 59.544 52.381 7.35 0.00 37.66 3.18
1279 1344 1.067974 ACGGACAATGTCGTCAGTTCA 59.932 47.619 7.35 0.00 40.75 3.18
1282 1347 0.944311 GCACGGACAATGTCGTCAGT 60.944 55.000 7.35 2.33 43.76 3.41
1286 1351 1.733041 CGAGCACGGACAATGTCGT 60.733 57.895 7.35 6.21 40.49 4.34
1298 1363 2.881074 TCTGAGTAAGCATTCGAGCAC 58.119 47.619 0.00 0.00 36.85 4.40
1315 1380 1.003355 AACCGGTCCAGCACATCTG 60.003 57.895 8.04 0.00 42.49 2.90
1571 1644 3.066900 GCATCTTCTTGGTAGTCTCGCTA 59.933 47.826 0.00 0.00 0.00 4.26
1579 1652 0.107703 TGCGGGCATCTTCTTGGTAG 60.108 55.000 0.00 0.00 0.00 3.18
1582 1655 2.768492 GCTGCGGGCATCTTCTTGG 61.768 63.158 0.00 0.00 41.35 3.61
1778 1858 4.632458 GAGATCTCGTCCGCGCCC 62.632 72.222 7.04 0.00 38.14 6.13
1892 1980 3.147595 CCCGCATCCTCGTCCTCA 61.148 66.667 0.00 0.00 0.00 3.86
2063 2171 4.135153 CTGCTCAGGTCCGACCGG 62.135 72.222 12.04 11.62 44.90 5.28
2243 2357 2.023501 AGGATTGAGCTCCTACCTGTCT 60.024 50.000 12.15 0.00 44.04 3.41
2263 2377 9.239002 CACGGTAAGATAATCTCTCTTAAACAG 57.761 37.037 0.00 0.00 37.06 3.16
2269 2383 5.361285 AGCACACGGTAAGATAATCTCTCTT 59.639 40.000 0.00 0.00 36.87 2.85
2285 2399 3.121030 GCTACTGCCAGCACACGG 61.121 66.667 0.00 0.00 41.40 4.94
2294 2408 2.030946 CACAATTAAGCTCGCTACTGCC 59.969 50.000 0.00 0.00 35.36 4.85
2342 2460 1.673665 GGCTGGACTGGAGCACAAG 60.674 63.158 0.00 0.00 38.27 3.16
2383 2503 3.636679 TGTTTGGGAGTTTGGATTCACA 58.363 40.909 0.00 0.00 0.00 3.58
2523 2649 2.586258 TTTCAGTGCGAGGCTAGATC 57.414 50.000 0.00 0.00 0.00 2.75
2534 2660 4.036852 ACTCCAAAAGTAGCTTTTCAGTGC 59.963 41.667 0.00 0.00 41.05 4.40
2561 2687 9.562583 CTAAAACCTACATCTATCTATCTTCGC 57.437 37.037 0.00 0.00 0.00 4.70
2562 2688 9.562583 GCTAAAACCTACATCTATCTATCTTCG 57.437 37.037 0.00 0.00 0.00 3.79
2573 2699 7.393234 TGCATTTTACTGCTAAAACCTACATCT 59.607 33.333 0.00 0.00 42.75 2.90
2574 2700 7.535139 TGCATTTTACTGCTAAAACCTACATC 58.465 34.615 0.00 0.00 42.75 3.06
2576 2702 6.712998 TCTGCATTTTACTGCTAAAACCTACA 59.287 34.615 0.00 0.00 42.75 2.74
2577 2703 7.141100 TCTGCATTTTACTGCTAAAACCTAC 57.859 36.000 0.00 0.00 42.75 3.18
2603 2762 3.689347 TGCAGCACATTCTTGGTTATCT 58.311 40.909 0.00 0.00 0.00 1.98
2607 2766 1.337447 GCATGCAGCACATTCTTGGTT 60.337 47.619 14.21 0.00 44.79 3.67
2608 2767 0.245539 GCATGCAGCACATTCTTGGT 59.754 50.000 14.21 0.00 44.79 3.67
2624 2796 5.086104 ACTACGGTAAAACAGATGAGCAT 57.914 39.130 0.00 0.00 0.00 3.79
2638 2810 1.472878 CAGAGCAGAGCAACTACGGTA 59.527 52.381 0.00 0.00 0.00 4.02
2706 2883 2.477845 GACTGTGCAGCATCGTGC 59.522 61.111 0.00 2.28 45.46 5.34
2735 2912 1.777101 CAATCTCGAGGAATCGCTCC 58.223 55.000 13.56 0.00 45.81 4.70
2765 2944 2.470196 CGTGTTCGTGGATAGATCGT 57.530 50.000 0.00 0.00 0.00 3.73
2825 3008 8.598041 ACCATTATTAGTCAGAACTCAGAAAGT 58.402 33.333 0.00 0.00 41.10 2.66
2846 3052 4.448395 CACGCACAATTCAATTGAACCATT 59.552 37.500 22.71 10.98 42.83 3.16
2850 3056 2.793790 TGCACGCACAATTCAATTGAAC 59.206 40.909 22.71 9.09 42.83 3.18
3069 3296 0.966920 ATTCAGTCAGTCCGTCCGTT 59.033 50.000 0.00 0.00 0.00 4.44
3092 3319 2.920490 TGTTTTGCAGAGTTTTGTTCGC 59.080 40.909 0.00 0.00 0.00 4.70
3097 3324 8.774586 AGTACTAGTATGTTTTGCAGAGTTTTG 58.225 33.333 5.75 0.00 0.00 2.44
3105 3332 9.017509 ACTGTAGTAGTACTAGTATGTTTTGCA 57.982 33.333 18.28 10.06 38.04 4.08
3123 3351 5.681639 TGATGCTAGACTGCTACTGTAGTA 58.318 41.667 15.71 10.73 39.21 1.82
3124 3352 4.527944 TGATGCTAGACTGCTACTGTAGT 58.472 43.478 15.71 0.00 41.76 2.73
3125 3353 5.506686 TTGATGCTAGACTGCTACTGTAG 57.493 43.478 10.48 10.48 0.00 2.74
3126 3354 5.914898 TTTGATGCTAGACTGCTACTGTA 57.085 39.130 0.00 0.00 0.00 2.74
3127 3355 4.808414 TTTGATGCTAGACTGCTACTGT 57.192 40.909 0.00 0.00 0.00 3.55
3128 3356 5.583854 ACATTTTGATGCTAGACTGCTACTG 59.416 40.000 0.00 0.00 0.00 2.74
3129 3357 5.583854 CACATTTTGATGCTAGACTGCTACT 59.416 40.000 0.00 0.00 0.00 2.57
3130 3358 5.220739 CCACATTTTGATGCTAGACTGCTAC 60.221 44.000 0.00 0.00 0.00 3.58
3131 3359 4.877823 CCACATTTTGATGCTAGACTGCTA 59.122 41.667 0.00 0.00 0.00 3.49
3132 3360 3.693085 CCACATTTTGATGCTAGACTGCT 59.307 43.478 0.00 0.00 0.00 4.24
3133 3361 3.691118 TCCACATTTTGATGCTAGACTGC 59.309 43.478 0.00 0.00 0.00 4.40
3134 3362 5.277202 CGATCCACATTTTGATGCTAGACTG 60.277 44.000 0.00 0.00 0.00 3.51
3135 3363 4.813161 CGATCCACATTTTGATGCTAGACT 59.187 41.667 0.00 0.00 0.00 3.24
3136 3364 4.811024 TCGATCCACATTTTGATGCTAGAC 59.189 41.667 0.00 0.00 0.00 2.59
3137 3365 5.022282 TCGATCCACATTTTGATGCTAGA 57.978 39.130 0.00 0.00 0.00 2.43
3179 3407 3.479866 CGTAGCAAGACATTCGTTCGTTC 60.480 47.826 0.00 0.00 0.00 3.95
3180 3408 2.407361 CGTAGCAAGACATTCGTTCGTT 59.593 45.455 0.00 0.00 0.00 3.85
3181 3409 1.983605 CGTAGCAAGACATTCGTTCGT 59.016 47.619 0.00 0.00 0.00 3.85
3182 3410 1.320555 CCGTAGCAAGACATTCGTTCG 59.679 52.381 0.00 0.00 0.00 3.95
3302 3532 1.626654 GCTCGGTTCGGACACACATG 61.627 60.000 0.00 0.00 0.00 3.21
3307 3537 3.112709 GCTGCTCGGTTCGGACAC 61.113 66.667 0.00 0.00 0.00 3.67
3308 3538 4.717629 CGCTGCTCGGTTCGGACA 62.718 66.667 0.00 0.00 33.78 4.02
3309 3539 4.719369 ACGCTGCTCGGTTCGGAC 62.719 66.667 0.00 0.00 43.86 4.79
3310 3540 4.717629 CACGCTGCTCGGTTCGGA 62.718 66.667 0.00 0.00 43.86 4.55
3364 3638 1.526917 GGGGATGGATGCAACCTCG 60.527 63.158 14.77 0.00 0.00 4.63
3384 3658 0.631212 GACAAGATGGGGTGGGGAAT 59.369 55.000 0.00 0.00 0.00 3.01
3385 3659 0.477597 AGACAAGATGGGGTGGGGAA 60.478 55.000 0.00 0.00 0.00 3.97
3386 3660 0.477597 AAGACAAGATGGGGTGGGGA 60.478 55.000 0.00 0.00 0.00 4.81
3389 3663 1.826385 GACAAGACAAGATGGGGTGG 58.174 55.000 0.00 0.00 0.00 4.61
3391 3665 1.348064 TCGACAAGACAAGATGGGGT 58.652 50.000 0.00 0.00 0.00 4.95
3397 3671 3.698289 AGGTAGGATCGACAAGACAAGA 58.302 45.455 0.00 0.00 0.00 3.02
3410 3684 3.331718 GGAGTAGGTCCAAGGTAGGAT 57.668 52.381 0.00 0.00 46.10 3.24
3430 3704 3.436924 TGCTGCATGCGAGCAAGG 61.437 61.111 29.98 10.82 43.47 3.61
3444 3718 2.928116 GTTTTATAAGCGTCCTCGTGCT 59.072 45.455 0.00 0.00 44.97 4.40
3474 3748 0.601558 GGCAGGATCGCCGATTACTA 59.398 55.000 0.00 0.00 43.52 1.82
3476 3750 3.952811 GGCAGGATCGCCGATTAC 58.047 61.111 0.00 0.00 43.52 1.89
3498 3772 0.532862 ATCGTTCACATGGGATCGCC 60.533 55.000 21.03 0.12 31.77 5.54
3499 3773 1.299541 AATCGTTCACATGGGATCGC 58.700 50.000 21.03 2.14 31.77 4.58
3500 3774 6.128553 CCTTATAAATCGTTCACATGGGATCG 60.129 42.308 20.03 20.03 0.00 3.69
3501 3775 6.149474 CCCTTATAAATCGTTCACATGGGATC 59.851 42.308 0.00 0.00 31.98 3.36
3502 3776 6.003950 CCCTTATAAATCGTTCACATGGGAT 58.996 40.000 0.00 0.00 31.98 3.85
3503 3777 5.131308 TCCCTTATAAATCGTTCACATGGGA 59.869 40.000 0.00 0.00 36.62 4.37
3504 3778 5.373222 TCCCTTATAAATCGTTCACATGGG 58.627 41.667 0.00 0.00 0.00 4.00
3505 3779 5.049405 GCTCCCTTATAAATCGTTCACATGG 60.049 44.000 0.00 0.00 0.00 3.66
3506 3780 5.527214 TGCTCCCTTATAAATCGTTCACATG 59.473 40.000 0.00 0.00 0.00 3.21
3507 3781 5.680619 TGCTCCCTTATAAATCGTTCACAT 58.319 37.500 0.00 0.00 0.00 3.21
3508 3782 5.092554 TGCTCCCTTATAAATCGTTCACA 57.907 39.130 0.00 0.00 0.00 3.58
3509 3783 6.431198 TTTGCTCCCTTATAAATCGTTCAC 57.569 37.500 0.00 0.00 0.00 3.18
3510 3784 7.639113 ATTTTGCTCCCTTATAAATCGTTCA 57.361 32.000 0.00 0.00 0.00 3.18
3511 3785 7.973944 ACAATTTTGCTCCCTTATAAATCGTTC 59.026 33.333 0.00 0.00 0.00 3.95
3512 3786 7.836842 ACAATTTTGCTCCCTTATAAATCGTT 58.163 30.769 0.00 0.00 0.00 3.85
3513 3787 7.404671 ACAATTTTGCTCCCTTATAAATCGT 57.595 32.000 0.00 0.00 0.00 3.73
3514 3788 7.165812 CGAACAATTTTGCTCCCTTATAAATCG 59.834 37.037 0.00 0.00 0.00 3.34
3515 3789 7.043391 GCGAACAATTTTGCTCCCTTATAAATC 60.043 37.037 0.00 0.00 38.89 2.17
3516 3790 6.756542 GCGAACAATTTTGCTCCCTTATAAAT 59.243 34.615 0.00 0.00 38.89 1.40
3517 3791 6.096695 GCGAACAATTTTGCTCCCTTATAAA 58.903 36.000 0.00 0.00 38.89 1.40
3518 3792 5.646606 GCGAACAATTTTGCTCCCTTATAA 58.353 37.500 0.00 0.00 38.89 0.98
3519 3793 5.243426 GCGAACAATTTTGCTCCCTTATA 57.757 39.130 0.00 0.00 38.89 0.98
3520 3794 4.110036 GCGAACAATTTTGCTCCCTTAT 57.890 40.909 0.00 0.00 38.89 1.73
3521 3795 3.569250 GCGAACAATTTTGCTCCCTTA 57.431 42.857 0.00 0.00 38.89 2.69
3522 3796 2.438868 GCGAACAATTTTGCTCCCTT 57.561 45.000 0.00 0.00 38.89 3.95
3528 3802 6.934561 AAATTCTCTAGCGAACAATTTTGC 57.065 33.333 0.00 0.00 41.94 3.68
3529 3803 7.218963 GCCTAAATTCTCTAGCGAACAATTTTG 59.781 37.037 0.00 0.00 30.34 2.44
3530 3804 7.251281 GCCTAAATTCTCTAGCGAACAATTTT 58.749 34.615 0.00 0.00 30.34 1.82
3531 3805 6.183360 GGCCTAAATTCTCTAGCGAACAATTT 60.183 38.462 0.00 0.00 31.57 1.82
3532 3806 5.297029 GGCCTAAATTCTCTAGCGAACAATT 59.703 40.000 0.00 0.00 0.00 2.32
3533 3807 4.816925 GGCCTAAATTCTCTAGCGAACAAT 59.183 41.667 0.00 0.00 0.00 2.71
3534 3808 4.189231 GGCCTAAATTCTCTAGCGAACAA 58.811 43.478 0.00 0.00 0.00 2.83
3535 3809 3.196901 TGGCCTAAATTCTCTAGCGAACA 59.803 43.478 3.32 0.00 0.00 3.18
3536 3810 3.793559 TGGCCTAAATTCTCTAGCGAAC 58.206 45.455 3.32 0.00 0.00 3.95
3537 3811 4.481368 TTGGCCTAAATTCTCTAGCGAA 57.519 40.909 3.32 0.00 0.00 4.70
3538 3812 4.481368 TTTGGCCTAAATTCTCTAGCGA 57.519 40.909 3.32 0.00 0.00 4.93
3539 3813 4.816385 TGATTTGGCCTAAATTCTCTAGCG 59.184 41.667 3.32 0.00 39.06 4.26
3540 3814 6.699575 TTGATTTGGCCTAAATTCTCTAGC 57.300 37.500 3.32 0.00 39.06 3.42
3541 3815 8.688747 AGATTGATTTGGCCTAAATTCTCTAG 57.311 34.615 3.32 0.00 39.06 2.43
3542 3816 8.497745 AGAGATTGATTTGGCCTAAATTCTCTA 58.502 33.333 24.02 10.81 42.79 2.43
3543 3817 7.352738 AGAGATTGATTTGGCCTAAATTCTCT 58.647 34.615 22.06 22.06 41.36 3.10
3544 3818 7.579761 AGAGATTGATTTGGCCTAAATTCTC 57.420 36.000 19.93 19.93 39.06 2.87
3545 3819 7.968014 AAGAGATTGATTTGGCCTAAATTCT 57.032 32.000 3.32 8.37 39.06 2.40
3546 3820 9.440773 AAAAAGAGATTGATTTGGCCTAAATTC 57.559 29.630 3.32 0.00 39.06 2.17
3642 3916 7.276878 GCAAAATTGTTGTACTACTTTTGTGGT 59.723 33.333 22.92 0.00 46.07 4.16
3663 3937 8.001881 TGGACTAAAATGTTCTGTTAGCAAAA 57.998 30.769 0.00 0.00 0.00 2.44
3747 4021 2.592287 GGCCCGGTTTCACGTCAA 60.592 61.111 0.00 0.00 0.00 3.18
3794 4080 3.745975 GCTCCCTATTTTGTTGTTTTGGC 59.254 43.478 0.00 0.00 0.00 4.52
3812 4098 0.673956 GTTCGAAACCCCTCAGCTCC 60.674 60.000 0.00 0.00 0.00 4.70
3904 6500 2.556144 AGATGTGCAGCTCTGTTTGA 57.444 45.000 0.00 0.00 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.