Multiple sequence alignment - TraesCS3A01G530700

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G530700 chr3A 100.000 4174 0 0 1 4174 743871706 743875879 0.000000e+00 7709
1 TraesCS3A01G530700 chr3A 84.492 187 25 2 1798 1983 743873278 743873461 9.220000e-42 182
2 TraesCS3A01G530700 chr3A 84.492 187 25 2 1573 1756 743873503 743873688 9.220000e-42 182
3 TraesCS3A01G530700 chr3D 89.795 3067 181 71 895 3882 610072801 610075814 0.000000e+00 3808
4 TraesCS3A01G530700 chr3D 82.353 391 37 19 447 810 610067701 610068086 1.130000e-80 311
5 TraesCS3A01G530700 chr3D 79.038 291 50 8 58 345 610071700 610071982 5.510000e-44 189
6 TraesCS3A01G530700 chr3D 84.737 190 28 1 1573 1762 610073713 610073901 5.510000e-44 189
7 TraesCS3A01G530700 chr3B 88.871 1914 112 54 2099 3932 821694864 821696756 0.000000e+00 2261
8 TraesCS3A01G530700 chr3B 89.880 1166 71 22 964 2103 821693566 821694710 0.000000e+00 1456
9 TraesCS3A01G530700 chr3B 84.170 777 46 22 3373 4108 821697056 821697796 0.000000e+00 682
10 TraesCS3A01G530700 chr3B 79.556 225 27 12 1798 2009 821694186 821694404 4.350000e-30 143
11 TraesCS3A01G530700 chr4D 84.411 263 27 7 1801 2054 214971112 214970855 3.220000e-61 246
12 TraesCS3A01G530700 chr7A 94.444 108 5 1 346 452 731577072 731577179 9.280000e-37 165
13 TraesCS3A01G530700 chr2B 95.146 103 4 1 345 446 11466183 11466285 1.200000e-35 161
14 TraesCS3A01G530700 chr2B 88.095 126 5 5 337 453 763945821 763945945 1.560000e-29 141
15 TraesCS3A01G530700 chr4A 92.035 113 5 3 346 456 718108310 718108200 5.590000e-34 156
16 TraesCS3A01G530700 chr4A 94.059 101 5 1 346 446 718108212 718108311 7.230000e-33 152
17 TraesCS3A01G530700 chr7B 93.269 104 4 1 346 446 489132002 489132105 2.600000e-32 150
18 TraesCS3A01G530700 chr6B 90.517 116 4 3 341 449 20752492 20752607 3.360000e-31 147
19 TraesCS3A01G530700 chr6B 88.710 124 8 4 336 456 222583409 222583289 3.360000e-31 147
20 TraesCS3A01G530700 chr2D 90.991 111 6 1 342 452 147229864 147229970 3.360000e-31 147
21 TraesCS3A01G530700 chr2D 83.562 146 18 5 1506 1651 595146810 595146949 9.420000e-27 132
22 TraesCS3A01G530700 chr5A 83.459 133 18 4 24 156 524028516 524028388 2.040000e-23 121
23 TraesCS3A01G530700 chr5B 81.081 148 20 4 1496 1643 694225122 694225261 1.230000e-20 111
24 TraesCS3A01G530700 chr1D 82.576 132 17 6 26 156 490306259 490306133 1.230000e-20 111
25 TraesCS3A01G530700 chrUn 84.211 114 14 4 26 139 9171304 9171413 1.590000e-19 108
26 TraesCS3A01G530700 chrUn 84.211 114 14 4 26 139 205600940 205601049 1.590000e-19 108
27 TraesCS3A01G530700 chr1B 84.211 114 14 4 26 139 680742810 680742919 1.590000e-19 108
28 TraesCS3A01G530700 chr1B 84.211 114 14 4 26 139 682486162 682486271 1.590000e-19 108


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G530700 chr3A 743871706 743875879 4173 False 2691.00 7709 89.661333 1 4174 3 chr3A.!!$F1 4173
1 TraesCS3A01G530700 chr3D 610067701 610075814 8113 False 1124.25 3808 83.980750 58 3882 4 chr3D.!!$F1 3824
2 TraesCS3A01G530700 chr3B 821693566 821697796 4230 False 1135.50 2261 85.619250 964 4108 4 chr3B.!!$F1 3144

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
362 4308 0.038744 ACTACTCCCTCCGTTCGGAA 59.961 55.0 14.79 0.04 33.41 4.30 F
513 4459 0.388659 GGAGCATCGTCAGAGCAGAT 59.611 55.0 0.00 0.00 34.37 2.90 F
515 4461 0.388659 AGCATCGTCAGAGCAGATCC 59.611 55.0 0.00 0.00 0.00 3.36 F
2233 6903 0.674581 TGCGTCCTCATCAAGCCTTG 60.675 55.0 0.00 0.00 0.00 3.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2192 6835 0.106569 TGGCATGATTACAGCAGGGG 60.107 55.0 0.00 0.0 0.00 4.79 R
2242 6912 0.258774 AAATGATAGCCCGGTGCCTT 59.741 50.0 10.82 0.0 42.71 4.35 R
2319 6990 0.393537 AGCTCCAGCATACAACAGCC 60.394 55.0 0.48 0.0 45.16 4.85 R
3763 8468 0.029567 CTCGGATCTAGTGACACGCC 59.970 60.0 0.00 0.0 0.00 5.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.628130 CAGGGACATCACCTTGATATTGAT 58.372 41.667 0.00 0.00 38.98 2.57
31 32 6.174720 TCACCTTGATATTGATGTACTCCC 57.825 41.667 0.00 0.00 0.00 4.30
32 33 5.905331 TCACCTTGATATTGATGTACTCCCT 59.095 40.000 0.00 0.00 0.00 4.20
34 35 6.042552 CACCTTGATATTGATGTACTCCCTCT 59.957 42.308 0.00 0.00 0.00 3.69
36 37 6.042552 CCTTGATATTGATGTACTCCCTCTGT 59.957 42.308 0.00 0.00 0.00 3.41
38 39 5.540337 TGATATTGATGTACTCCCTCTGTCC 59.460 44.000 0.00 0.00 0.00 4.02
40 41 1.033574 GATGTACTCCCTCTGTCCCG 58.966 60.000 0.00 0.00 0.00 5.14
41 42 0.629596 ATGTACTCCCTCTGTCCCGA 59.370 55.000 0.00 0.00 0.00 5.14
43 44 1.006758 TGTACTCCCTCTGTCCCGAAT 59.993 52.381 0.00 0.00 0.00 3.34
44 45 2.108970 GTACTCCCTCTGTCCCGAATT 58.891 52.381 0.00 0.00 0.00 2.17
45 46 2.544844 ACTCCCTCTGTCCCGAATTA 57.455 50.000 0.00 0.00 0.00 1.40
47 48 2.292323 ACTCCCTCTGTCCCGAATTAGT 60.292 50.000 0.00 0.00 0.00 2.24
48 49 2.766828 CTCCCTCTGTCCCGAATTAGTT 59.233 50.000 0.00 0.00 0.00 2.24
50 51 2.236395 CCCTCTGTCCCGAATTAGTTGT 59.764 50.000 0.00 0.00 0.00 3.32
52 53 3.306780 CCTCTGTCCCGAATTAGTTGTGT 60.307 47.826 0.00 0.00 0.00 3.72
53 54 4.315803 CTCTGTCCCGAATTAGTTGTGTT 58.684 43.478 0.00 0.00 0.00 3.32
54 55 5.471556 TCTGTCCCGAATTAGTTGTGTTA 57.528 39.130 0.00 0.00 0.00 2.41
55 56 6.045072 TCTGTCCCGAATTAGTTGTGTTAT 57.955 37.500 0.00 0.00 0.00 1.89
56 57 7.172868 TCTGTCCCGAATTAGTTGTGTTATA 57.827 36.000 0.00 0.00 0.00 0.98
57 58 7.613585 TCTGTCCCGAATTAGTTGTGTTATAA 58.386 34.615 0.00 0.00 0.00 0.98
58 59 7.762615 TCTGTCCCGAATTAGTTGTGTTATAAG 59.237 37.037 0.00 0.00 0.00 1.73
59 60 7.388437 TGTCCCGAATTAGTTGTGTTATAAGT 58.612 34.615 0.00 0.00 0.00 2.24
60 61 8.530311 TGTCCCGAATTAGTTGTGTTATAAGTA 58.470 33.333 0.00 0.00 0.00 2.24
61 62 9.538508 GTCCCGAATTAGTTGTGTTATAAGTAT 57.461 33.333 0.00 0.00 0.00 2.12
89 4032 4.244425 AGATACGGATGTATGCAGACAC 57.756 45.455 17.79 10.59 41.37 3.67
91 4034 0.530744 ACGGATGTATGCAGACACGT 59.469 50.000 20.29 20.29 30.52 4.49
110 4053 6.332504 CACGTTTTAGTGTGAGATACATCC 57.667 41.667 0.00 0.00 42.24 3.51
112 4055 4.026804 CGTTTTAGTGTGAGATACATCCGC 60.027 45.833 0.00 0.00 42.24 5.54
117 4060 3.055591 GTGTGAGATACATCCGCATCTG 58.944 50.000 0.00 0.00 42.24 2.90
135 4080 6.703607 CGCATCTGGATAAATCTAAGACAACT 59.296 38.462 0.00 0.00 0.00 3.16
145 4090 9.968870 ATAAATCTAAGACAACTAATCCGAGAC 57.031 33.333 0.00 0.00 0.00 3.36
148 4093 4.985538 AAGACAACTAATCCGAGACGAT 57.014 40.909 0.00 0.00 0.00 3.73
156 4101 6.889301 ACTAATCCGAGACGATGGTAATAA 57.111 37.500 0.00 0.00 0.00 1.40
159 4104 8.027771 ACTAATCCGAGACGATGGTAATAATTC 58.972 37.037 0.00 0.00 0.00 2.17
165 4110 4.989168 AGACGATGGTAATAATTCCGCTTC 59.011 41.667 0.00 0.00 0.00 3.86
167 4112 3.423123 CGATGGTAATAATTCCGCTTCGC 60.423 47.826 0.00 0.00 0.00 4.70
186 4131 1.475280 GCGAGGGGGAAAAATTGTACC 59.525 52.381 0.00 0.00 0.00 3.34
187 4132 2.797786 CGAGGGGGAAAAATTGTACCA 58.202 47.619 0.00 0.00 0.00 3.25
188 4133 2.490509 CGAGGGGGAAAAATTGTACCAC 59.509 50.000 0.00 0.00 0.00 4.16
200 4145 1.018148 TGTACCACAAGGCACAAACG 58.982 50.000 0.00 0.00 38.24 3.60
205 4150 1.923864 CCACAAGGCACAAACGTTTTC 59.076 47.619 11.66 3.54 0.00 2.29
223 4168 6.911484 GTTTTCGACATGTTTGAAATCGAT 57.089 33.333 20.91 0.00 41.09 3.59
226 4171 7.547285 TTTCGACATGTTTGAAATCGATTTC 57.453 32.000 33.94 33.94 44.83 2.17
239 4185 5.376854 AATCGATTTCAGGTCTTTGTTGG 57.623 39.130 4.39 0.00 0.00 3.77
243 4189 5.468746 TCGATTTCAGGTCTTTGTTGGTAAG 59.531 40.000 0.00 0.00 0.00 2.34
244 4190 4.911514 TTTCAGGTCTTTGTTGGTAAGC 57.088 40.909 0.00 0.00 0.00 3.09
247 4193 0.879090 GGTCTTTGTTGGTAAGCCGG 59.121 55.000 0.00 0.00 37.67 6.13
250 4196 1.133730 TCTTTGTTGGTAAGCCGGGTT 60.134 47.619 24.22 24.22 37.67 4.11
252 4198 1.033574 TTGTTGGTAAGCCGGGTTTG 58.966 50.000 26.02 0.00 37.67 2.93
264 4210 0.662970 CGGGTTTGCAATTCACGTGG 60.663 55.000 17.00 0.00 0.00 4.94
271 4217 1.855213 GCAATTCACGTGGAGCAGCA 61.855 55.000 17.00 0.00 0.00 4.41
272 4218 0.167470 CAATTCACGTGGAGCAGCAG 59.833 55.000 17.00 0.00 0.00 4.24
274 4220 2.736579 ATTCACGTGGAGCAGCAGCA 62.737 55.000 17.00 0.00 45.49 4.41
275 4221 3.420606 CACGTGGAGCAGCAGCAG 61.421 66.667 7.95 0.00 45.49 4.24
278 4224 3.432588 GTGGAGCAGCAGCAGCAG 61.433 66.667 12.92 0.00 45.49 4.24
284 4230 3.432588 CAGCAGCAGCAGCCTGTC 61.433 66.667 6.10 0.00 45.49 3.51
286 4232 2.672307 GCAGCAGCAGCCTGTCTT 60.672 61.111 0.00 0.00 43.56 3.01
287 4233 2.979197 GCAGCAGCAGCCTGTCTTG 61.979 63.158 0.00 0.00 43.56 3.02
289 4235 4.099170 GCAGCAGCCTGTCTTGCG 62.099 66.667 0.00 0.00 41.26 4.85
290 4236 2.667536 CAGCAGCCTGTCTTGCGT 60.668 61.111 0.00 0.00 34.31 5.24
291 4237 2.667536 AGCAGCCTGTCTTGCGTG 60.668 61.111 0.00 0.00 0.00 5.34
292 4238 3.730761 GCAGCCTGTCTTGCGTGG 61.731 66.667 0.00 0.00 0.00 4.94
293 4239 3.730761 CAGCCTGTCTTGCGTGGC 61.731 66.667 0.00 0.00 45.21 5.01
295 4241 4.030452 GCCTGTCTTGCGTGGCAC 62.030 66.667 7.79 7.79 44.34 5.01
335 4281 2.235898 AGGATGAGTGTCCTCTTGCTTC 59.764 50.000 0.00 0.00 45.51 3.86
339 4285 2.563179 TGAGTGTCCTCTTGCTTCTACC 59.437 50.000 0.00 0.00 38.61 3.18
342 4288 2.300437 GTGTCCTCTTGCTTCTACCACT 59.700 50.000 0.00 0.00 0.00 4.00
343 4289 3.510360 GTGTCCTCTTGCTTCTACCACTA 59.490 47.826 0.00 0.00 0.00 2.74
344 4290 3.510360 TGTCCTCTTGCTTCTACCACTAC 59.490 47.826 0.00 0.00 0.00 2.73
345 4291 3.764972 GTCCTCTTGCTTCTACCACTACT 59.235 47.826 0.00 0.00 0.00 2.57
346 4292 4.948621 GTCCTCTTGCTTCTACCACTACTA 59.051 45.833 0.00 0.00 0.00 1.82
347 4293 4.948621 TCCTCTTGCTTCTACCACTACTAC 59.051 45.833 0.00 0.00 0.00 2.73
348 4294 4.951094 CCTCTTGCTTCTACCACTACTACT 59.049 45.833 0.00 0.00 0.00 2.57
349 4295 5.066764 CCTCTTGCTTCTACCACTACTACTC 59.933 48.000 0.00 0.00 0.00 2.59
350 4296 4.948621 TCTTGCTTCTACCACTACTACTCC 59.051 45.833 0.00 0.00 0.00 3.85
351 4297 3.629087 TGCTTCTACCACTACTACTCCC 58.371 50.000 0.00 0.00 0.00 4.30
352 4298 3.268856 TGCTTCTACCACTACTACTCCCT 59.731 47.826 0.00 0.00 0.00 4.20
353 4299 3.884693 GCTTCTACCACTACTACTCCCTC 59.115 52.174 0.00 0.00 0.00 4.30
354 4300 4.463070 CTTCTACCACTACTACTCCCTCC 58.537 52.174 0.00 0.00 0.00 4.30
355 4301 2.437281 TCTACCACTACTACTCCCTCCG 59.563 54.545 0.00 0.00 0.00 4.63
356 4302 0.998145 ACCACTACTACTCCCTCCGT 59.002 55.000 0.00 0.00 0.00 4.69
357 4303 1.357079 ACCACTACTACTCCCTCCGTT 59.643 52.381 0.00 0.00 0.00 4.44
358 4304 2.022934 CCACTACTACTCCCTCCGTTC 58.977 57.143 0.00 0.00 0.00 3.95
359 4305 1.669779 CACTACTACTCCCTCCGTTCG 59.330 57.143 0.00 0.00 0.00 3.95
360 4306 1.307097 CTACTACTCCCTCCGTTCGG 58.693 60.000 4.74 4.74 0.00 4.30
361 4307 0.911769 TACTACTCCCTCCGTTCGGA 59.088 55.000 13.34 13.34 0.00 4.55
362 4308 0.038744 ACTACTCCCTCCGTTCGGAA 59.961 55.000 14.79 0.04 33.41 4.30
363 4309 1.341778 ACTACTCCCTCCGTTCGGAAT 60.342 52.381 14.79 2.09 33.41 3.01
364 4310 1.755380 CTACTCCCTCCGTTCGGAATT 59.245 52.381 14.79 0.00 33.41 2.17
365 4311 1.856629 ACTCCCTCCGTTCGGAATTA 58.143 50.000 14.79 2.82 33.41 1.40
366 4312 1.479730 ACTCCCTCCGTTCGGAATTAC 59.520 52.381 14.79 0.00 33.41 1.89
367 4313 1.755380 CTCCCTCCGTTCGGAATTACT 59.245 52.381 14.79 0.00 33.41 2.24
368 4314 2.167900 CTCCCTCCGTTCGGAATTACTT 59.832 50.000 14.79 0.00 33.41 2.24
369 4315 2.093869 TCCCTCCGTTCGGAATTACTTG 60.094 50.000 14.79 1.97 33.41 3.16
370 4316 2.354403 CCCTCCGTTCGGAATTACTTGT 60.354 50.000 14.79 0.00 33.41 3.16
371 4317 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
372 4318 3.368116 CCTCCGTTCGGAATTACTTGTCT 60.368 47.826 14.79 0.00 33.41 3.41
373 4319 3.841643 TCCGTTCGGAATTACTTGTCTC 58.158 45.455 11.66 0.00 0.00 3.36
374 4320 3.256383 TCCGTTCGGAATTACTTGTCTCA 59.744 43.478 11.66 0.00 0.00 3.27
375 4321 3.612860 CCGTTCGGAATTACTTGTCTCAG 59.387 47.826 5.19 0.00 0.00 3.35
376 4322 4.482386 CGTTCGGAATTACTTGTCTCAGA 58.518 43.478 0.00 0.00 0.00 3.27
377 4323 4.921515 CGTTCGGAATTACTTGTCTCAGAA 59.078 41.667 0.00 0.00 0.00 3.02
378 4324 5.404366 CGTTCGGAATTACTTGTCTCAGAAA 59.596 40.000 0.00 0.00 0.00 2.52
379 4325 6.090898 CGTTCGGAATTACTTGTCTCAGAAAT 59.909 38.462 0.00 0.00 0.00 2.17
380 4326 6.968131 TCGGAATTACTTGTCTCAGAAATG 57.032 37.500 0.00 0.00 0.00 2.32
381 4327 5.874810 TCGGAATTACTTGTCTCAGAAATGG 59.125 40.000 0.00 0.00 0.00 3.16
382 4328 5.874810 CGGAATTACTTGTCTCAGAAATGGA 59.125 40.000 0.00 0.00 0.00 3.41
383 4329 6.540189 CGGAATTACTTGTCTCAGAAATGGAT 59.460 38.462 0.00 0.00 0.00 3.41
384 4330 7.466455 CGGAATTACTTGTCTCAGAAATGGATG 60.466 40.741 0.00 0.00 0.00 3.51
385 4331 7.337942 GGAATTACTTGTCTCAGAAATGGATGT 59.662 37.037 0.00 0.00 0.00 3.06
386 4332 9.383519 GAATTACTTGTCTCAGAAATGGATGTA 57.616 33.333 0.00 0.00 0.00 2.29
387 4333 9.911788 AATTACTTGTCTCAGAAATGGATGTAT 57.088 29.630 0.00 0.00 0.00 2.29
388 4334 8.948631 TTACTTGTCTCAGAAATGGATGTATC 57.051 34.615 0.00 0.00 0.00 2.24
389 4335 7.192852 ACTTGTCTCAGAAATGGATGTATCT 57.807 36.000 0.00 0.00 0.00 1.98
390 4336 8.311395 ACTTGTCTCAGAAATGGATGTATCTA 57.689 34.615 0.00 0.00 0.00 1.98
391 4337 8.762645 ACTTGTCTCAGAAATGGATGTATCTAA 58.237 33.333 0.00 0.00 0.00 2.10
392 4338 9.605275 CTTGTCTCAGAAATGGATGTATCTAAA 57.395 33.333 0.00 0.00 0.00 1.85
419 4365 8.637196 ACATCTAGATACATCCATTTCTACGA 57.363 34.615 4.54 0.00 0.00 3.43
420 4366 8.516234 ACATCTAGATACATCCATTTCTACGAC 58.484 37.037 4.54 0.00 0.00 4.34
421 4367 8.515414 CATCTAGATACATCCATTTCTACGACA 58.485 37.037 4.54 0.00 0.00 4.35
422 4368 8.459911 TCTAGATACATCCATTTCTACGACAA 57.540 34.615 0.00 0.00 0.00 3.18
423 4369 8.568794 TCTAGATACATCCATTTCTACGACAAG 58.431 37.037 0.00 0.00 0.00 3.16
424 4370 7.113658 AGATACATCCATTTCTACGACAAGT 57.886 36.000 0.00 0.00 0.00 3.16
425 4371 8.234136 AGATACATCCATTTCTACGACAAGTA 57.766 34.615 0.00 0.00 0.00 2.24
426 4372 8.692710 AGATACATCCATTTCTACGACAAGTAA 58.307 33.333 0.00 0.00 34.45 2.24
427 4373 9.477484 GATACATCCATTTCTACGACAAGTAAT 57.523 33.333 0.00 0.00 34.45 1.89
428 4374 9.832445 ATACATCCATTTCTACGACAAGTAATT 57.168 29.630 0.00 0.00 34.45 1.40
429 4375 8.197988 ACATCCATTTCTACGACAAGTAATTC 57.802 34.615 0.00 0.00 34.45 2.17
430 4376 7.280205 ACATCCATTTCTACGACAAGTAATTCC 59.720 37.037 0.00 0.00 34.45 3.01
431 4377 5.808540 TCCATTTCTACGACAAGTAATTCCG 59.191 40.000 0.00 0.00 34.45 4.30
432 4378 5.808540 CCATTTCTACGACAAGTAATTCCGA 59.191 40.000 0.00 0.00 34.45 4.55
433 4379 6.311935 CCATTTCTACGACAAGTAATTCCGAA 59.688 38.462 0.00 0.00 34.45 4.30
434 4380 6.695292 TTTCTACGACAAGTAATTCCGAAC 57.305 37.500 0.00 0.00 34.45 3.95
435 4381 4.406069 TCTACGACAAGTAATTCCGAACG 58.594 43.478 0.00 0.00 34.45 3.95
436 4382 2.331194 ACGACAAGTAATTCCGAACGG 58.669 47.619 6.94 6.94 0.00 4.44
437 4383 2.030007 ACGACAAGTAATTCCGAACGGA 60.030 45.455 12.04 12.04 43.52 4.69
438 4384 2.597305 CGACAAGTAATTCCGAACGGAG 59.403 50.000 15.34 5.60 46.06 4.63
439 4385 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
440 4386 2.564062 ACAAGTAATTCCGAACGGAGGA 59.436 45.455 15.34 3.20 46.06 3.71
472 4418 0.525455 GCGCGCCAAGAAATTAAGGG 60.525 55.000 23.24 0.00 0.00 3.95
478 4424 3.673323 CGCCAAGAAATTAAGGGAAGCAC 60.673 47.826 0.00 0.00 0.00 4.40
480 4426 3.119495 CCAAGAAATTAAGGGAAGCACCG 60.119 47.826 0.00 0.00 40.11 4.94
510 4456 2.491621 CGGAGCATCGTCAGAGCA 59.508 61.111 0.00 0.00 34.37 4.26
512 4458 1.812525 GGAGCATCGTCAGAGCAGA 59.187 57.895 0.00 0.00 34.37 4.26
513 4459 0.388659 GGAGCATCGTCAGAGCAGAT 59.611 55.000 0.00 0.00 34.37 2.90
514 4460 1.602668 GGAGCATCGTCAGAGCAGATC 60.603 57.143 0.00 0.00 34.37 2.75
515 4461 0.388659 AGCATCGTCAGAGCAGATCC 59.611 55.000 0.00 0.00 0.00 3.36
516 4462 0.938637 GCATCGTCAGAGCAGATCCG 60.939 60.000 0.00 0.00 0.00 4.18
517 4463 0.938637 CATCGTCAGAGCAGATCCGC 60.939 60.000 0.00 0.00 0.00 5.54
539 4485 1.672356 AATCAGCGGCTCACACACC 60.672 57.895 0.00 0.00 0.00 4.16
566 4519 6.554605 CCAACTAATCATGACCCCCATTAATT 59.445 38.462 0.00 0.00 31.94 1.40
567 4520 7.728083 CCAACTAATCATGACCCCCATTAATTA 59.272 37.037 0.00 0.00 31.94 1.40
568 4521 9.142014 CAACTAATCATGACCCCCATTAATTAA 57.858 33.333 0.00 0.00 31.94 1.40
569 4522 8.706322 ACTAATCATGACCCCCATTAATTAAC 57.294 34.615 0.00 0.00 31.94 2.01
570 4523 6.994421 AATCATGACCCCCATTAATTAACC 57.006 37.500 0.00 0.00 31.94 2.85
571 4524 5.473849 TCATGACCCCCATTAATTAACCA 57.526 39.130 0.00 0.00 31.94 3.67
572 4525 5.843469 TCATGACCCCCATTAATTAACCAA 58.157 37.500 0.00 0.00 31.94 3.67
573 4526 6.264528 TCATGACCCCCATTAATTAACCAAA 58.735 36.000 0.00 0.00 31.94 3.28
574 4527 6.155393 TCATGACCCCCATTAATTAACCAAAC 59.845 38.462 0.00 0.00 31.94 2.93
575 4528 5.403512 TGACCCCCATTAATTAACCAAACA 58.596 37.500 0.00 0.00 0.00 2.83
601 4554 1.684450 CCCAACCTGTTAACCACAACC 59.316 52.381 2.48 0.00 33.87 3.77
606 4559 3.284617 ACCTGTTAACCACAACCAAGAC 58.715 45.455 2.48 0.00 33.87 3.01
609 4562 3.697045 CTGTTAACCACAACCAAGACCAA 59.303 43.478 2.48 0.00 33.87 3.67
614 4567 4.135747 ACCACAACCAAGACCAAAATTG 57.864 40.909 0.00 0.00 0.00 2.32
618 4571 5.925969 CCACAACCAAGACCAAAATTGATAC 59.074 40.000 0.00 0.00 0.00 2.24
619 4572 5.925969 CACAACCAAGACCAAAATTGATACC 59.074 40.000 0.00 0.00 0.00 2.73
620 4573 5.160641 CAACCAAGACCAAAATTGATACCG 58.839 41.667 0.00 0.00 0.00 4.02
647 4600 4.043200 GCCAAGGCGAACCAGCAC 62.043 66.667 0.00 0.00 39.06 4.40
648 4601 3.726517 CCAAGGCGAACCAGCACG 61.727 66.667 0.00 0.00 39.06 5.34
649 4602 2.664851 CAAGGCGAACCAGCACGA 60.665 61.111 0.00 0.00 39.06 4.35
650 4603 2.357517 AAGGCGAACCAGCACGAG 60.358 61.111 0.00 0.00 39.06 4.18
654 4607 2.664851 CGAACCAGCACGAGCCAA 60.665 61.111 0.00 0.00 43.56 4.52
655 4608 2.946762 GAACCAGCACGAGCCAAC 59.053 61.111 0.00 0.00 43.56 3.77
656 4609 2.594592 AACCAGCACGAGCCAACC 60.595 61.111 0.00 0.00 43.56 3.77
657 4610 4.988598 ACCAGCACGAGCCAACCG 62.989 66.667 0.00 0.00 43.56 4.44
676 4629 4.899239 CCCCGCTGGCGTCTCATC 62.899 72.222 13.84 0.00 37.81 2.92
681 4634 4.899239 CTGGCGTCTCATCGGGCC 62.899 72.222 0.00 0.00 45.76 5.80
685 4638 4.570663 CGTCTCATCGGGCCGTCC 62.571 72.222 27.32 7.43 0.00 4.79
686 4639 3.458163 GTCTCATCGGGCCGTCCA 61.458 66.667 27.32 7.13 34.36 4.02
687 4640 2.682136 TCTCATCGGGCCGTCCAA 60.682 61.111 27.32 6.68 34.36 3.53
688 4641 2.511600 CTCATCGGGCCGTCCAAC 60.512 66.667 27.32 0.00 34.36 3.77
689 4642 4.090588 TCATCGGGCCGTCCAACC 62.091 66.667 27.32 0.00 34.36 3.77
699 4652 4.717313 GTCCAACCCCCGCTCCAC 62.717 72.222 0.00 0.00 0.00 4.02
700 4653 4.974438 TCCAACCCCCGCTCCACT 62.974 66.667 0.00 0.00 0.00 4.00
701 4654 4.410400 CCAACCCCCGCTCCACTC 62.410 72.222 0.00 0.00 0.00 3.51
702 4655 4.760047 CAACCCCCGCTCCACTCG 62.760 72.222 0.00 0.00 0.00 4.18
706 4659 4.899239 CCCCGCTCCACTCGCATC 62.899 72.222 0.00 0.00 0.00 3.91
707 4660 4.899239 CCCGCTCCACTCGCATCC 62.899 72.222 0.00 0.00 0.00 3.51
709 4662 4.193334 CGCTCCACTCGCATCCGA 62.193 66.667 0.00 0.00 42.01 4.55
710 4663 2.583593 GCTCCACTCGCATCCGAC 60.584 66.667 0.00 0.00 38.82 4.79
711 4664 2.278206 CTCCACTCGCATCCGACG 60.278 66.667 0.00 0.00 38.82 5.12
712 4665 3.758088 CTCCACTCGCATCCGACGG 62.758 68.421 7.84 7.84 38.82 4.79
753 4706 2.399611 GATTCGAAACCGCCAGCG 59.600 61.111 0.00 4.75 39.44 5.18
754 4707 3.718480 GATTCGAAACCGCCAGCGC 62.718 63.158 6.50 0.00 38.24 5.92
909 5348 0.683973 CCCTCAATCTCCCATCCGAG 59.316 60.000 0.00 0.00 0.00 4.63
911 5350 1.342819 CCTCAATCTCCCATCCGAGTC 59.657 57.143 0.00 0.00 0.00 3.36
934 5373 1.739338 CGGGTCCTCTGGATTCTCCG 61.739 65.000 0.00 0.00 40.17 4.63
938 5377 2.066393 CCTCTGGATTCTCCGCCCA 61.066 63.158 0.00 0.00 40.17 5.36
942 5381 4.570874 GGATTCTCCGCCCAGGCC 62.571 72.222 2.37 0.00 40.77 5.19
990 5429 2.702751 TTCGAGAGGGCGCGTTTTCA 62.703 55.000 8.43 0.00 38.51 2.69
1203 5651 1.064946 CGAGAGCGACATGGACCTC 59.935 63.158 0.00 0.00 40.82 3.85
1341 5795 3.488090 GTACGTGCCTTGCGCCTC 61.488 66.667 4.18 0.00 35.42 4.70
1429 5884 2.300723 GTTTGGGGCCGAGGTAAATTTT 59.699 45.455 0.00 0.00 0.00 1.82
1443 5899 5.073008 AGGTAAATTTTCCCCAAATTGTGCT 59.927 36.000 10.00 0.00 43.20 4.40
1444 5900 5.181056 GGTAAATTTTCCCCAAATTGTGCTG 59.819 40.000 2.50 0.00 43.20 4.41
1453 5909 5.005094 CCCCAAATTGTGCTGAATTCATTT 58.995 37.500 8.96 2.64 0.00 2.32
1535 6010 4.104086 TGATCAGTACAGGTTGGAGGAAT 58.896 43.478 0.00 0.00 0.00 3.01
1546 6021 5.358160 CAGGTTGGAGGAATATTTCTGGAAC 59.642 44.000 0.00 3.74 0.00 3.62
1550 6025 3.877508 GGAGGAATATTTCTGGAACCACG 59.122 47.826 0.00 0.00 0.00 4.94
1552 6027 5.395990 GGAGGAATATTTCTGGAACCACGTA 60.396 44.000 0.00 0.00 0.00 3.57
1553 6028 5.671493 AGGAATATTTCTGGAACCACGTAG 58.329 41.667 0.00 0.00 0.00 3.51
1554 6029 4.814771 GGAATATTTCTGGAACCACGTAGG 59.185 45.833 0.00 0.00 45.67 3.18
1555 6030 5.395990 GGAATATTTCTGGAACCACGTAGGA 60.396 44.000 10.46 0.00 41.22 2.94
1562 6037 5.452255 TCTGGAACCACGTAGGAGTATATT 58.548 41.667 10.46 0.00 41.22 1.28
1563 6038 5.895534 TCTGGAACCACGTAGGAGTATATTT 59.104 40.000 10.46 0.00 41.22 1.40
1568 6043 5.065914 ACCACGTAGGAGTATATTTAGCGA 58.934 41.667 10.46 0.00 41.22 4.93
1613 6088 5.414454 CCTTACTAGCACAATTTTGGTAGCA 59.586 40.000 23.94 13.34 46.95 3.49
1639 6115 3.670627 GCTTCCAAGTGAATTGCCGTTAG 60.671 47.826 0.00 0.00 37.60 2.34
1652 6128 8.251026 TGAATTGCCGTTAGTATCTATCTATGG 58.749 37.037 0.00 0.00 0.00 2.74
1660 6136 5.730296 AGTATCTATCTATGGCGTTGCTT 57.270 39.130 0.00 0.00 0.00 3.91
1661 6137 6.102897 AGTATCTATCTATGGCGTTGCTTT 57.897 37.500 0.00 0.00 0.00 3.51
1662 6138 5.928839 AGTATCTATCTATGGCGTTGCTTTG 59.071 40.000 0.00 0.00 0.00 2.77
1663 6139 4.137116 TCTATCTATGGCGTTGCTTTGT 57.863 40.909 0.00 0.00 0.00 2.83
1688 6172 9.677567 GTTTTGCTCTGAATTTTATCTGTAACA 57.322 29.630 0.00 0.00 0.00 2.41
1803 6287 3.251484 CCATTATAGAGAGCCCTCCCAA 58.749 50.000 0.00 0.00 40.30 4.12
1823 6307 6.938030 TCCCAAATGAATTTGTCGTTACTAGT 59.062 34.615 13.28 0.00 44.21 2.57
1824 6308 8.095792 TCCCAAATGAATTTGTCGTTACTAGTA 58.904 33.333 13.28 0.00 44.21 1.82
1825 6309 8.388103 CCCAAATGAATTTGTCGTTACTAGTAG 58.612 37.037 13.28 0.00 44.21 2.57
1826 6310 8.932791 CCAAATGAATTTGTCGTTACTAGTAGT 58.067 33.333 8.14 8.14 44.21 2.73
1842 6326 9.643693 TTACTAGTAGTACATTTTTGGTAGCAC 57.356 33.333 9.62 0.00 28.93 4.40
1894 6378 1.280421 TGGCTGCCCTGTTTTGTTTTT 59.720 42.857 17.53 0.00 0.00 1.94
1938 6422 2.728318 CAGCTCATGATAACATCGACGG 59.272 50.000 0.00 0.00 34.15 4.79
1983 6467 5.009631 TGTTTGATCCGATTTGACTCCATT 58.990 37.500 0.00 0.00 0.00 3.16
2016 6500 7.865385 GTGCTAAACAAAAATCTACAATGACCA 59.135 33.333 0.00 0.00 0.00 4.02
2103 6588 3.963665 TGCACAGCAGTACAATTTTGTC 58.036 40.909 0.00 0.00 37.01 3.18
2104 6589 3.243367 TGCACAGCAGTACAATTTTGTCC 60.243 43.478 0.00 0.00 37.01 4.02
2105 6590 3.857010 GCACAGCAGTACAATTTTGTCCC 60.857 47.826 0.00 0.00 42.35 4.46
2106 6591 3.317711 CACAGCAGTACAATTTTGTCCCA 59.682 43.478 0.00 0.00 42.35 4.37
2107 6592 3.957497 ACAGCAGTACAATTTTGTCCCAA 59.043 39.130 0.00 0.00 42.35 4.12
2110 6595 5.240623 CAGCAGTACAATTTTGTCCCAACTA 59.759 40.000 0.00 0.00 42.35 2.24
2111 6596 5.240844 AGCAGTACAATTTTGTCCCAACTAC 59.759 40.000 0.00 0.00 42.35 2.73
2137 6780 9.123902 CCATGATTCTACAGACCATTTTTATGA 57.876 33.333 0.00 0.00 0.00 2.15
2154 6797 8.532186 TTTTTATGATTTAGCCCTATTGCTCA 57.468 30.769 0.00 0.00 41.68 4.26
2197 6840 2.282462 GGCACCAGTTGTCCCCTG 60.282 66.667 0.00 0.00 0.00 4.45
2198 6841 2.985847 GCACCAGTTGTCCCCTGC 60.986 66.667 0.00 0.00 0.00 4.85
2199 6842 2.839098 CACCAGTTGTCCCCTGCT 59.161 61.111 0.00 0.00 0.00 4.24
2200 6843 1.601759 CACCAGTTGTCCCCTGCTG 60.602 63.158 0.00 0.00 0.00 4.41
2201 6844 2.078665 ACCAGTTGTCCCCTGCTGT 61.079 57.895 0.00 0.00 0.00 4.40
2204 6874 1.004745 CCAGTTGTCCCCTGCTGTAAT 59.995 52.381 0.00 0.00 0.00 1.89
2227 6897 1.026182 GCCATGTGCGTCCTCATCAA 61.026 55.000 0.00 0.00 0.00 2.57
2232 6902 0.674895 GTGCGTCCTCATCAAGCCTT 60.675 55.000 0.00 0.00 0.00 4.35
2233 6903 0.674581 TGCGTCCTCATCAAGCCTTG 60.675 55.000 0.00 0.00 0.00 3.61
2234 6904 1.372087 GCGTCCTCATCAAGCCTTGG 61.372 60.000 4.30 0.00 0.00 3.61
2236 6906 1.611673 CGTCCTCATCAAGCCTTGGTT 60.612 52.381 4.30 0.00 0.00 3.67
2237 6907 2.087646 GTCCTCATCAAGCCTTGGTTC 58.912 52.381 4.30 0.00 0.00 3.62
2238 6908 1.704628 TCCTCATCAAGCCTTGGTTCA 59.295 47.619 4.30 0.00 0.00 3.18
2239 6909 2.089980 CCTCATCAAGCCTTGGTTCAG 58.910 52.381 4.30 0.00 0.00 3.02
2240 6910 2.290514 CCTCATCAAGCCTTGGTTCAGA 60.291 50.000 4.30 0.00 0.00 3.27
2242 6912 2.639347 TCATCAAGCCTTGGTTCAGAGA 59.361 45.455 4.30 0.00 0.00 3.10
2249 6919 1.528129 CTTGGTTCAGAGAAGGCACC 58.472 55.000 0.00 0.00 0.00 5.01
2290 6961 7.307870 GCTCATTCATTAGTCTTGCCTAGAATG 60.308 40.741 0.00 0.00 41.27 2.67
2330 7001 9.772973 TTAACTTAGTATATGGGCTGTTGTATG 57.227 33.333 0.00 0.00 0.00 2.39
2332 7003 4.982241 AGTATATGGGCTGTTGTATGCT 57.018 40.909 0.00 0.00 0.00 3.79
2334 7005 2.346766 TATGGGCTGTTGTATGCTGG 57.653 50.000 0.00 0.00 0.00 4.85
2335 7006 0.625316 ATGGGCTGTTGTATGCTGGA 59.375 50.000 0.00 0.00 0.00 3.86
2342 7013 1.347378 TGTTGTATGCTGGAGCTGACA 59.653 47.619 0.00 1.55 42.66 3.58
2349 7020 0.599558 GCTGGAGCTGACATTTTGCA 59.400 50.000 0.00 0.00 38.21 4.08
2430 7102 0.319900 TTCACTCGCTGCTGTTCTCC 60.320 55.000 0.00 0.00 0.00 3.71
2436 7108 0.463295 CGCTGCTGTTCTCCATCCAT 60.463 55.000 0.00 0.00 0.00 3.41
2602 7277 0.466189 ACACACCAGACCAAGGCTTG 60.466 55.000 20.31 20.31 0.00 4.01
2610 7285 2.956987 CCAAGGCTTGGCGACTTG 59.043 61.111 31.72 8.13 45.17 3.16
2611 7286 2.256461 CAAGGCTTGGCGACTTGC 59.744 61.111 19.55 0.00 45.38 4.01
2629 7304 4.515191 ACTTGCGCTGTTCAATTTTCTCTA 59.485 37.500 9.73 0.00 0.00 2.43
2630 7305 4.668576 TGCGCTGTTCAATTTTCTCTAG 57.331 40.909 9.73 0.00 0.00 2.43
2648 7323 5.478332 TCTCTAGAGAAATTGAGCTGTGTGA 59.522 40.000 20.31 0.00 33.91 3.58
2660 7335 2.103094 AGCTGTGTGACTGAGCTGTTTA 59.897 45.455 7.91 0.00 41.56 2.01
2681 7356 0.820871 TGTTTTGCCAACCAGGTGAC 59.179 50.000 0.00 0.00 40.61 3.67
2718 7393 4.430007 TGTCATAATAGACAACGACCTGC 58.570 43.478 0.00 0.00 44.92 4.85
2825 7500 2.753043 TCGCTCCCGGTGGTCTAC 60.753 66.667 0.00 0.00 34.56 2.59
2915 7590 2.943265 AACTCCATGCCCCTGCCT 60.943 61.111 0.00 0.00 36.33 4.75
2967 7642 1.014564 GTGGCACTCCAAGTACGAGC 61.015 60.000 11.13 0.00 45.53 5.03
2981 7656 2.672996 GAGCGGAAAGGCCTGCAA 60.673 61.111 5.69 0.00 38.23 4.08
3066 7741 0.674895 GCTGAAATCCTCACTGCGGT 60.675 55.000 0.00 0.00 0.00 5.68
3152 7827 2.176273 GTACGAGAGGCGGCGTAGA 61.176 63.158 9.37 0.00 46.49 2.59
3192 7867 3.423749 TGATGCTTCTTGGATGCAGAAA 58.576 40.909 12.27 0.00 43.82 2.52
3197 7874 5.613329 TGCTTCTTGGATGCAGAAATTTTT 58.387 33.333 0.00 0.00 37.70 1.94
3294 7973 0.614415 ACAGAGGAGGAGAGTGCAGG 60.614 60.000 0.00 0.00 0.00 4.85
3433 8117 5.346011 CGCTAGCATACCATGTATGTACAAG 59.654 44.000 16.45 8.54 39.99 3.16
3577 8266 9.396387 AGGAAATGATACTCCCATGGAACAACA 62.396 40.741 15.22 6.63 35.05 3.33
3609 8298 1.434287 GGTGTTTTGGAAACGCCGT 59.566 52.632 17.29 0.00 40.47 5.68
3610 8299 0.593008 GGTGTTTTGGAAACGCCGTC 60.593 55.000 17.29 0.00 40.47 4.79
3611 8300 0.593008 GTGTTTTGGAAACGCCGTCC 60.593 55.000 0.00 0.00 40.66 4.79
3612 8301 1.008194 GTTTTGGAAACGCCGTCCC 60.008 57.895 0.00 0.00 40.66 4.46
3613 8302 2.544698 TTTTGGAAACGCCGTCCCG 61.545 57.895 0.00 0.00 40.66 5.14
3718 8416 8.284945 TGTGATTGAAAAATAGGAGAATCTGG 57.715 34.615 0.00 0.00 33.73 3.86
3758 8463 3.057739 CAGCGCGTGTCGTATATGTTATC 59.942 47.826 8.43 0.00 41.07 1.75
3761 8466 4.488731 GCGCGTGTCGTATATGTTATCATG 60.489 45.833 8.43 0.00 41.07 3.07
3762 8467 4.615541 CGCGTGTCGTATATGTTATCATGT 59.384 41.667 0.00 0.00 35.70 3.21
3763 8468 5.441485 CGCGTGTCGTATATGTTATCATGTG 60.441 44.000 0.00 0.00 35.70 3.21
3764 8469 5.164090 GCGTGTCGTATATGTTATCATGTGG 60.164 44.000 0.00 0.00 35.70 4.17
3765 8470 5.164090 CGTGTCGTATATGTTATCATGTGGC 60.164 44.000 0.00 0.00 35.70 5.01
3766 8471 4.920927 TGTCGTATATGTTATCATGTGGCG 59.079 41.667 0.00 1.17 35.70 5.69
3767 8472 4.921515 GTCGTATATGTTATCATGTGGCGT 59.078 41.667 0.00 0.00 35.70 5.68
3770 8475 5.164090 CGTATATGTTATCATGTGGCGTGTC 60.164 44.000 0.00 0.00 35.70 3.67
3771 8476 2.464157 TGTTATCATGTGGCGTGTCA 57.536 45.000 0.00 0.00 0.00 3.58
3772 8477 2.073056 TGTTATCATGTGGCGTGTCAC 58.927 47.619 0.00 0.00 38.09 3.67
3773 8478 2.289382 TGTTATCATGTGGCGTGTCACT 60.289 45.455 6.14 0.00 38.40 3.41
3774 8479 3.056465 TGTTATCATGTGGCGTGTCACTA 60.056 43.478 6.14 0.00 38.40 2.74
3777 8489 1.824852 TCATGTGGCGTGTCACTAGAT 59.175 47.619 6.14 0.00 38.40 1.98
3779 8491 0.530744 TGTGGCGTGTCACTAGATCC 59.469 55.000 6.14 0.00 38.40 3.36
3783 8495 1.015109 GCGTGTCACTAGATCCGAGA 58.985 55.000 0.00 0.00 0.00 4.04
3820 8555 0.464554 GAAGGGGGATTTGCGAGGAG 60.465 60.000 0.00 0.00 0.00 3.69
3825 8560 1.065418 GGGGATTTGCGAGGAGAGAAA 60.065 52.381 0.00 0.00 0.00 2.52
3826 8561 2.284190 GGGATTTGCGAGGAGAGAAAG 58.716 52.381 0.00 0.00 0.00 2.62
3827 8562 2.284190 GGATTTGCGAGGAGAGAAAGG 58.716 52.381 0.00 0.00 0.00 3.11
3828 8563 2.093447 GGATTTGCGAGGAGAGAAAGGA 60.093 50.000 0.00 0.00 0.00 3.36
3829 8564 3.600388 GATTTGCGAGGAGAGAAAGGAA 58.400 45.455 0.00 0.00 0.00 3.36
3830 8565 2.457366 TTGCGAGGAGAGAAAGGAAC 57.543 50.000 0.00 0.00 0.00 3.62
3831 8566 1.338107 TGCGAGGAGAGAAAGGAACA 58.662 50.000 0.00 0.00 0.00 3.18
3872 9463 1.993956 TGCAATGGCTAACACAGGTT 58.006 45.000 0.00 0.00 41.91 3.50
3874 9465 2.035704 TGCAATGGCTAACACAGGTTTG 59.964 45.455 0.00 0.00 41.91 2.93
3875 9466 2.295909 GCAATGGCTAACACAGGTTTGA 59.704 45.455 0.00 0.00 38.45 2.69
3876 9467 3.056607 GCAATGGCTAACACAGGTTTGAT 60.057 43.478 0.00 0.00 38.45 2.57
3878 9469 5.163513 CAATGGCTAACACAGGTTTGATTC 58.836 41.667 0.00 0.00 38.45 2.52
3947 9552 3.488721 GCAGCCAAGTTCATCATGATGTC 60.489 47.826 30.01 23.61 39.72 3.06
3962 9567 0.254178 ATGTCTGTCTGCCCATCCAC 59.746 55.000 0.00 0.00 0.00 4.02
4061 9669 9.651913 AAATTAACAATTATTCGAGCAATGGTT 57.348 25.926 14.63 14.63 33.76 3.67
4071 9679 3.271014 CAATGGTTGCTGCTCGCT 58.729 55.556 0.00 0.00 40.11 4.93
4072 9680 2.470156 CAATGGTTGCTGCTCGCTA 58.530 52.632 0.00 0.00 40.11 4.26
4073 9681 0.376152 CAATGGTTGCTGCTCGCTAG 59.624 55.000 0.00 0.00 40.11 3.42
4108 9716 3.546543 TCGGCCGGCCTATCCTTG 61.547 66.667 41.01 24.66 0.00 3.61
4109 9717 4.626081 CGGCCGGCCTATCCTTGG 62.626 72.222 41.01 20.75 0.00 3.61
4110 9718 3.168528 GGCCGGCCTATCCTTGGA 61.169 66.667 38.76 0.00 0.00 3.53
4111 9719 2.752807 GGCCGGCCTATCCTTGGAA 61.753 63.158 38.76 0.00 0.00 3.53
4112 9720 1.226262 GCCGGCCTATCCTTGGAAA 59.774 57.895 18.11 0.00 0.00 3.13
4113 9721 1.101635 GCCGGCCTATCCTTGGAAAC 61.102 60.000 18.11 0.00 0.00 2.78
4114 9722 0.254747 CCGGCCTATCCTTGGAAACA 59.745 55.000 0.00 0.00 39.83 2.83
4115 9723 1.379527 CGGCCTATCCTTGGAAACAC 58.620 55.000 0.00 0.00 42.67 3.32
4116 9724 1.065418 CGGCCTATCCTTGGAAACACT 60.065 52.381 0.00 0.00 42.67 3.55
4117 9725 2.618045 CGGCCTATCCTTGGAAACACTT 60.618 50.000 0.00 0.00 42.67 3.16
4118 9726 3.017442 GGCCTATCCTTGGAAACACTTC 58.983 50.000 0.00 0.00 42.67 3.01
4119 9727 3.561313 GGCCTATCCTTGGAAACACTTCA 60.561 47.826 0.00 0.00 42.67 3.02
4120 9728 3.691609 GCCTATCCTTGGAAACACTTCAG 59.308 47.826 0.00 0.00 42.67 3.02
4121 9729 4.565652 GCCTATCCTTGGAAACACTTCAGA 60.566 45.833 0.00 0.00 42.67 3.27
4122 9730 4.938226 CCTATCCTTGGAAACACTTCAGAC 59.062 45.833 0.00 0.00 42.67 3.51
4123 9731 3.208747 TCCTTGGAAACACTTCAGACC 57.791 47.619 0.00 0.00 42.67 3.85
4124 9732 2.777692 TCCTTGGAAACACTTCAGACCT 59.222 45.455 0.00 0.00 42.67 3.85
4125 9733 3.971305 TCCTTGGAAACACTTCAGACCTA 59.029 43.478 0.00 0.00 42.67 3.08
4126 9734 4.597507 TCCTTGGAAACACTTCAGACCTAT 59.402 41.667 0.00 0.00 42.67 2.57
4127 9735 5.073144 TCCTTGGAAACACTTCAGACCTATT 59.927 40.000 0.00 0.00 42.67 1.73
4128 9736 6.271391 TCCTTGGAAACACTTCAGACCTATTA 59.729 38.462 0.00 0.00 42.67 0.98
4129 9737 6.371825 CCTTGGAAACACTTCAGACCTATTAC 59.628 42.308 0.00 0.00 42.67 1.89
4130 9738 6.428083 TGGAAACACTTCAGACCTATTACA 57.572 37.500 0.00 0.00 33.40 2.41
4131 9739 6.464222 TGGAAACACTTCAGACCTATTACAG 58.536 40.000 0.00 0.00 33.40 2.74
4132 9740 6.042781 TGGAAACACTTCAGACCTATTACAGT 59.957 38.462 0.00 0.00 33.40 3.55
4133 9741 6.935208 GGAAACACTTCAGACCTATTACAGTT 59.065 38.462 0.00 0.00 32.75 3.16
4134 9742 7.444487 GGAAACACTTCAGACCTATTACAGTTT 59.556 37.037 0.00 0.00 32.75 2.66
4135 9743 9.485206 GAAACACTTCAGACCTATTACAGTTTA 57.515 33.333 0.00 0.00 0.00 2.01
4136 9744 9.841295 AAACACTTCAGACCTATTACAGTTTAA 57.159 29.630 0.00 0.00 0.00 1.52
4137 9745 8.828688 ACACTTCAGACCTATTACAGTTTAAC 57.171 34.615 0.00 0.00 0.00 2.01
4138 9746 8.648693 ACACTTCAGACCTATTACAGTTTAACT 58.351 33.333 0.00 0.00 0.00 2.24
4141 9749 9.804758 CTTCAGACCTATTACAGTTTAACTAGG 57.195 37.037 8.78 8.78 33.49 3.02
4142 9750 9.537852 TTCAGACCTATTACAGTTTAACTAGGA 57.462 33.333 15.40 0.00 32.03 2.94
4143 9751 9.186837 TCAGACCTATTACAGTTTAACTAGGAG 57.813 37.037 15.40 6.97 32.03 3.69
4144 9752 7.921745 CAGACCTATTACAGTTTAACTAGGAGC 59.078 40.741 15.40 8.37 32.03 4.70
4145 9753 7.618512 AGACCTATTACAGTTTAACTAGGAGCA 59.381 37.037 15.40 0.00 32.03 4.26
4146 9754 8.142485 ACCTATTACAGTTTAACTAGGAGCAA 57.858 34.615 15.40 0.00 32.03 3.91
4147 9755 8.769359 ACCTATTACAGTTTAACTAGGAGCAAT 58.231 33.333 15.40 2.07 32.03 3.56
4154 9762 9.515226 ACAGTTTAACTAGGAGCAATAAATGAA 57.485 29.630 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 5.628130 CATCAATATCAAGGTGATGTCCCT 58.372 41.667 6.27 0.00 42.35 4.20
7 8 6.560304 AGGGAGTACATCAATATCAAGGTGAT 59.440 38.462 0.00 0.00 40.72 3.06
8 9 5.905331 AGGGAGTACATCAATATCAAGGTGA 59.095 40.000 0.00 0.00 0.00 4.02
9 10 6.042552 AGAGGGAGTACATCAATATCAAGGTG 59.957 42.308 0.00 0.00 0.00 4.00
10 11 6.042552 CAGAGGGAGTACATCAATATCAAGGT 59.957 42.308 0.00 0.00 0.00 3.50
11 12 6.042552 ACAGAGGGAGTACATCAATATCAAGG 59.957 42.308 0.00 0.00 0.00 3.61
13 14 6.042093 GGACAGAGGGAGTACATCAATATCAA 59.958 42.308 0.00 0.00 0.00 2.57
14 15 5.540337 GGACAGAGGGAGTACATCAATATCA 59.460 44.000 0.00 0.00 0.00 2.15
15 16 5.046950 GGGACAGAGGGAGTACATCAATATC 60.047 48.000 0.00 0.00 0.00 1.63
16 17 4.841246 GGGACAGAGGGAGTACATCAATAT 59.159 45.833 0.00 0.00 0.00 1.28
17 18 4.223953 GGGACAGAGGGAGTACATCAATA 58.776 47.826 0.00 0.00 0.00 1.90
19 20 2.467880 GGGACAGAGGGAGTACATCAA 58.532 52.381 0.00 0.00 0.00 2.57
21 22 1.033574 CGGGACAGAGGGAGTACATC 58.966 60.000 0.00 0.00 0.00 3.06
23 24 0.406750 TTCGGGACAGAGGGAGTACA 59.593 55.000 0.00 0.00 0.00 2.90
25 26 2.544844 AATTCGGGACAGAGGGAGTA 57.455 50.000 0.00 0.00 0.00 2.59
27 28 2.389715 ACTAATTCGGGACAGAGGGAG 58.610 52.381 0.00 0.00 0.00 4.30
28 29 2.500098 CAACTAATTCGGGACAGAGGGA 59.500 50.000 0.00 0.00 0.00 4.20
29 30 2.236395 ACAACTAATTCGGGACAGAGGG 59.764 50.000 0.00 0.00 0.00 4.30
31 32 3.926616 ACACAACTAATTCGGGACAGAG 58.073 45.455 0.00 0.00 0.00 3.35
32 33 4.345859 AACACAACTAATTCGGGACAGA 57.654 40.909 0.00 0.00 0.00 3.41
34 35 7.388437 ACTTATAACACAACTAATTCGGGACA 58.612 34.615 0.00 0.00 0.00 4.02
60 61 9.190317 TCTGCATACATCCGTATCTAGATAAAT 57.810 33.333 14.09 5.98 36.11 1.40
61 62 8.459635 GTCTGCATACATCCGTATCTAGATAAA 58.540 37.037 14.09 3.92 36.11 1.40
64 4007 5.946377 TGTCTGCATACATCCGTATCTAGAT 59.054 40.000 10.73 10.73 36.11 1.98
72 4015 0.530744 ACGTGTCTGCATACATCCGT 59.469 50.000 12.98 12.98 0.00 4.69
75 4018 5.120208 ACACTAAAACGTGTCTGCATACATC 59.880 40.000 8.28 2.10 44.32 3.06
83 4026 5.918576 TGTATCTCACACTAAAACGTGTCTG 59.081 40.000 0.00 0.00 45.74 3.51
89 4032 4.026804 GCGGATGTATCTCACACTAAAACG 60.027 45.833 0.00 0.00 40.86 3.60
91 4034 5.079689 TGCGGATGTATCTCACACTAAAA 57.920 39.130 0.00 0.00 40.86 1.52
100 4043 3.883830 ATCCAGATGCGGATGTATCTC 57.116 47.619 0.00 0.00 44.53 2.75
103 4046 6.305272 AGATTTATCCAGATGCGGATGTAT 57.695 37.500 0.00 0.00 45.65 2.29
109 4052 5.541845 TGTCTTAGATTTATCCAGATGCGG 58.458 41.667 0.00 0.00 0.00 5.69
110 4053 6.703607 AGTTGTCTTAGATTTATCCAGATGCG 59.296 38.462 0.00 0.00 0.00 4.73
117 4060 9.413048 CTCGGATTAGTTGTCTTAGATTTATCC 57.587 37.037 0.00 0.00 0.00 2.59
125 4068 5.481200 TCGTCTCGGATTAGTTGTCTTAG 57.519 43.478 0.00 0.00 0.00 2.18
135 4080 7.318141 GGAATTATTACCATCGTCTCGGATTA 58.682 38.462 0.00 0.00 0.00 1.75
139 4084 3.918591 CGGAATTATTACCATCGTCTCGG 59.081 47.826 0.00 0.00 0.00 4.63
140 4085 3.364023 GCGGAATTATTACCATCGTCTCG 59.636 47.826 0.00 0.00 0.00 4.04
145 4090 4.307834 CGAAGCGGAATTATTACCATCG 57.692 45.455 0.00 0.00 0.00 3.84
165 4110 1.131693 GTACAATTTTTCCCCCTCGCG 59.868 52.381 0.00 0.00 0.00 5.87
167 4112 2.490509 GTGGTACAATTTTTCCCCCTCG 59.509 50.000 0.00 0.00 44.16 4.63
168 4113 3.502356 TGTGGTACAATTTTTCCCCCTC 58.498 45.455 0.00 0.00 44.16 4.30
186 4131 1.581602 CGAAAACGTTTGTGCCTTGTG 59.418 47.619 15.46 0.00 0.00 3.33
187 4132 1.469308 TCGAAAACGTTTGTGCCTTGT 59.531 42.857 15.46 0.00 0.00 3.16
188 4133 1.843753 GTCGAAAACGTTTGTGCCTTG 59.156 47.619 15.46 2.36 0.00 3.61
200 4145 6.911484 ATCGATTTCAAACATGTCGAAAAC 57.089 33.333 20.84 17.97 43.42 2.43
219 4164 3.815809 ACCAACAAAGACCTGAAATCGA 58.184 40.909 0.00 0.00 0.00 3.59
220 4165 5.682943 TTACCAACAAAGACCTGAAATCG 57.317 39.130 0.00 0.00 0.00 3.34
221 4166 5.461526 GCTTACCAACAAAGACCTGAAATC 58.538 41.667 0.00 0.00 0.00 2.17
222 4167 4.280929 GGCTTACCAACAAAGACCTGAAAT 59.719 41.667 0.00 0.00 35.26 2.17
223 4168 3.634910 GGCTTACCAACAAAGACCTGAAA 59.365 43.478 0.00 0.00 35.26 2.69
226 4171 1.535462 CGGCTTACCAACAAAGACCTG 59.465 52.381 0.00 0.00 34.57 4.00
227 4172 1.544759 CCGGCTTACCAACAAAGACCT 60.545 52.381 0.00 0.00 34.57 3.85
228 4173 0.879090 CCGGCTTACCAACAAAGACC 59.121 55.000 0.00 0.00 34.57 3.85
229 4174 0.879090 CCCGGCTTACCAACAAAGAC 59.121 55.000 0.00 0.00 34.57 3.01
230 4175 0.475044 ACCCGGCTTACCAACAAAGA 59.525 50.000 0.00 0.00 34.57 2.52
231 4176 1.324383 AACCCGGCTTACCAACAAAG 58.676 50.000 0.00 0.00 34.57 2.77
239 4185 1.271102 TGAATTGCAAACCCGGCTTAC 59.729 47.619 1.71 0.00 0.00 2.34
243 4189 1.732683 CGTGAATTGCAAACCCGGC 60.733 57.895 1.71 0.00 0.00 6.13
244 4190 0.662970 CACGTGAATTGCAAACCCGG 60.663 55.000 10.90 0.00 0.00 5.73
247 4193 1.930371 GCTCCACGTGAATTGCAAACC 60.930 52.381 19.30 0.00 0.00 3.27
250 4196 0.592637 CTGCTCCACGTGAATTGCAA 59.407 50.000 19.30 0.00 0.00 4.08
252 4198 1.154150 GCTGCTCCACGTGAATTGC 60.154 57.895 19.30 15.05 0.00 3.56
271 4217 2.672307 GCAAGACAGGCTGCTGCT 60.672 61.111 22.47 12.77 39.59 4.24
272 4218 4.099170 CGCAAGACAGGCTGCTGC 62.099 66.667 15.89 18.96 43.02 5.25
274 4220 2.667536 CACGCAAGACAGGCTGCT 60.668 61.111 15.89 10.05 43.62 4.24
275 4221 3.730761 CCACGCAAGACAGGCTGC 61.731 66.667 15.89 7.65 43.62 5.25
276 4222 3.730761 GCCACGCAAGACAGGCTG 61.731 66.667 14.16 14.16 45.07 4.85
280 4226 1.771073 TTTCGTGCCACGCAAGACAG 61.771 55.000 13.39 0.00 45.42 3.51
284 4230 2.003443 CGTTTTCGTGCCACGCAAG 61.003 57.895 13.39 0.29 41.47 4.01
286 4232 3.943034 CCGTTTTCGTGCCACGCA 61.943 61.111 13.39 0.00 42.21 5.24
287 4233 3.170810 TTCCGTTTTCGTGCCACGC 62.171 57.895 13.39 0.00 42.21 5.34
289 4235 1.161563 TCCTTCCGTTTTCGTGCCAC 61.162 55.000 0.00 0.00 42.35 5.01
290 4236 0.250553 ATCCTTCCGTTTTCGTGCCA 60.251 50.000 0.00 0.00 42.35 4.92
291 4237 0.446616 GATCCTTCCGTTTTCGTGCC 59.553 55.000 0.00 0.00 42.35 5.01
292 4238 0.094730 CGATCCTTCCGTTTTCGTGC 59.905 55.000 0.00 0.00 42.35 5.34
293 4239 0.719465 CCGATCCTTCCGTTTTCGTG 59.281 55.000 0.00 0.00 42.35 4.35
294 4240 0.390735 CCCGATCCTTCCGTTTTCGT 60.391 55.000 0.00 0.00 42.35 3.85
295 4241 0.108520 TCCCGATCCTTCCGTTTTCG 60.109 55.000 0.00 0.00 43.67 3.46
330 4276 3.268856 AGGGAGTAGTAGTGGTAGAAGCA 59.731 47.826 0.00 0.00 0.00 3.91
331 4277 3.884693 GAGGGAGTAGTAGTGGTAGAAGC 59.115 52.174 0.00 0.00 0.00 3.86
335 4281 2.172293 ACGGAGGGAGTAGTAGTGGTAG 59.828 54.545 0.00 0.00 0.00 3.18
339 4285 1.669779 CGAACGGAGGGAGTAGTAGTG 59.330 57.143 0.00 0.00 0.00 2.74
342 4288 0.911769 TCCGAACGGAGGGAGTAGTA 59.088 55.000 12.04 0.00 39.76 1.82
343 4289 0.038744 TTCCGAACGGAGGGAGTAGT 59.961 55.000 15.34 0.00 46.06 2.73
344 4290 1.400737 ATTCCGAACGGAGGGAGTAG 58.599 55.000 15.34 0.00 46.06 2.57
345 4291 1.856629 AATTCCGAACGGAGGGAGTA 58.143 50.000 15.34 1.05 46.06 2.59
346 4292 1.479730 GTAATTCCGAACGGAGGGAGT 59.520 52.381 15.34 4.12 46.06 3.85
347 4293 1.755380 AGTAATTCCGAACGGAGGGAG 59.245 52.381 15.34 0.00 46.06 4.30
348 4294 1.856629 AGTAATTCCGAACGGAGGGA 58.143 50.000 15.34 2.49 46.06 4.20
349 4295 2.277084 CAAGTAATTCCGAACGGAGGG 58.723 52.381 15.34 0.00 46.06 4.30
350 4296 2.928116 GACAAGTAATTCCGAACGGAGG 59.072 50.000 15.34 4.52 46.06 4.30
351 4297 3.846360 AGACAAGTAATTCCGAACGGAG 58.154 45.455 15.34 5.60 46.06 4.63
352 4298 3.256383 TGAGACAAGTAATTCCGAACGGA 59.744 43.478 12.04 12.04 43.52 4.69
353 4299 3.581755 TGAGACAAGTAATTCCGAACGG 58.418 45.455 6.94 6.94 0.00 4.44
354 4300 4.482386 TCTGAGACAAGTAATTCCGAACG 58.518 43.478 0.00 0.00 0.00 3.95
355 4301 6.780706 TTTCTGAGACAAGTAATTCCGAAC 57.219 37.500 0.00 0.00 0.00 3.95
356 4302 6.371548 CCATTTCTGAGACAAGTAATTCCGAA 59.628 38.462 0.00 0.00 0.00 4.30
357 4303 5.874810 CCATTTCTGAGACAAGTAATTCCGA 59.125 40.000 0.00 0.00 0.00 4.55
358 4304 5.874810 TCCATTTCTGAGACAAGTAATTCCG 59.125 40.000 0.00 0.00 0.00 4.30
359 4305 7.337942 ACATCCATTTCTGAGACAAGTAATTCC 59.662 37.037 0.00 0.00 0.00 3.01
360 4306 8.273780 ACATCCATTTCTGAGACAAGTAATTC 57.726 34.615 0.00 0.00 0.00 2.17
361 4307 9.911788 ATACATCCATTTCTGAGACAAGTAATT 57.088 29.630 0.00 0.00 0.00 1.40
362 4308 9.553064 GATACATCCATTTCTGAGACAAGTAAT 57.447 33.333 0.00 0.00 0.00 1.89
363 4309 8.762645 AGATACATCCATTTCTGAGACAAGTAA 58.237 33.333 0.00 0.00 0.00 2.24
364 4310 8.311395 AGATACATCCATTTCTGAGACAAGTA 57.689 34.615 0.00 0.00 0.00 2.24
365 4311 7.192852 AGATACATCCATTTCTGAGACAAGT 57.807 36.000 0.00 0.00 0.00 3.16
366 4312 9.605275 TTTAGATACATCCATTTCTGAGACAAG 57.395 33.333 0.00 0.00 0.00 3.16
393 4339 9.734984 TCGTAGAAATGGATGTATCTAGATGTA 57.265 33.333 15.79 4.44 0.00 2.29
394 4340 8.516234 GTCGTAGAAATGGATGTATCTAGATGT 58.484 37.037 15.79 1.25 39.69 3.06
395 4341 8.515414 TGTCGTAGAAATGGATGTATCTAGATG 58.485 37.037 15.79 0.00 39.69 2.90
396 4342 8.637196 TGTCGTAGAAATGGATGTATCTAGAT 57.363 34.615 10.73 10.73 39.69 1.98
397 4343 8.459911 TTGTCGTAGAAATGGATGTATCTAGA 57.540 34.615 0.00 0.00 39.69 2.43
398 4344 8.353684 ACTTGTCGTAGAAATGGATGTATCTAG 58.646 37.037 0.00 0.00 39.69 2.43
399 4345 8.234136 ACTTGTCGTAGAAATGGATGTATCTA 57.766 34.615 0.00 0.00 39.69 1.98
400 4346 7.113658 ACTTGTCGTAGAAATGGATGTATCT 57.886 36.000 0.00 0.00 39.69 1.98
401 4347 8.867112 TTACTTGTCGTAGAAATGGATGTATC 57.133 34.615 0.00 0.00 39.69 2.24
402 4348 9.832445 AATTACTTGTCGTAGAAATGGATGTAT 57.168 29.630 0.00 0.00 39.69 2.29
403 4349 9.309516 GAATTACTTGTCGTAGAAATGGATGTA 57.690 33.333 0.00 0.00 39.69 2.29
404 4350 7.280205 GGAATTACTTGTCGTAGAAATGGATGT 59.720 37.037 0.00 0.00 39.69 3.06
405 4351 7.516785 CGGAATTACTTGTCGTAGAAATGGATG 60.517 40.741 0.00 0.00 39.69 3.51
406 4352 6.479001 CGGAATTACTTGTCGTAGAAATGGAT 59.521 38.462 0.00 0.00 39.69 3.41
407 4353 5.808540 CGGAATTACTTGTCGTAGAAATGGA 59.191 40.000 0.00 0.00 39.69 3.41
408 4354 5.808540 TCGGAATTACTTGTCGTAGAAATGG 59.191 40.000 0.00 0.00 39.69 3.16
409 4355 6.880822 TCGGAATTACTTGTCGTAGAAATG 57.119 37.500 0.00 0.00 39.69 2.32
410 4356 6.034256 CGTTCGGAATTACTTGTCGTAGAAAT 59.966 38.462 0.00 0.00 39.69 2.17
411 4357 5.343058 CGTTCGGAATTACTTGTCGTAGAAA 59.657 40.000 0.00 0.00 39.69 2.52
412 4358 4.853196 CGTTCGGAATTACTTGTCGTAGAA 59.147 41.667 0.00 0.00 39.69 2.10
413 4359 4.406069 CGTTCGGAATTACTTGTCGTAGA 58.594 43.478 0.00 0.00 0.00 2.59
414 4360 3.545078 CCGTTCGGAATTACTTGTCGTAG 59.455 47.826 5.19 0.00 0.00 3.51
415 4361 3.190327 TCCGTTCGGAATTACTTGTCGTA 59.810 43.478 11.66 0.00 0.00 3.43
416 4362 2.030007 TCCGTTCGGAATTACTTGTCGT 60.030 45.455 11.66 0.00 0.00 4.34
417 4363 2.597305 CTCCGTTCGGAATTACTTGTCG 59.403 50.000 14.79 0.00 33.41 4.35
418 4364 2.928116 CCTCCGTTCGGAATTACTTGTC 59.072 50.000 14.79 0.00 33.41 3.18
419 4365 2.564062 TCCTCCGTTCGGAATTACTTGT 59.436 45.455 14.79 0.00 33.41 3.16
420 4366 3.241067 TCCTCCGTTCGGAATTACTTG 57.759 47.619 14.79 1.97 33.41 3.16
421 4367 3.260128 ACTTCCTCCGTTCGGAATTACTT 59.740 43.478 14.79 0.00 39.64 2.24
422 4368 2.830321 ACTTCCTCCGTTCGGAATTACT 59.170 45.455 14.79 0.00 39.64 2.24
423 4369 3.242549 ACTTCCTCCGTTCGGAATTAC 57.757 47.619 14.79 0.00 39.64 1.89
424 4370 3.131046 GGTACTTCCTCCGTTCGGAATTA 59.869 47.826 14.79 1.22 39.64 1.40
425 4371 2.093816 GGTACTTCCTCCGTTCGGAATT 60.094 50.000 14.79 0.00 39.64 2.17
426 4372 1.479730 GGTACTTCCTCCGTTCGGAAT 59.520 52.381 14.79 2.09 39.64 3.01
427 4373 0.890683 GGTACTTCCTCCGTTCGGAA 59.109 55.000 14.79 0.00 38.18 4.30
428 4374 0.038744 AGGTACTTCCTCCGTTCGGA 59.961 55.000 13.34 13.34 44.42 4.55
429 4375 0.172803 CAGGTACTTCCTCCGTTCGG 59.827 60.000 4.74 4.74 46.24 4.30
430 4376 0.886563 ACAGGTACTTCCTCCGTTCG 59.113 55.000 0.00 0.00 46.24 3.95
431 4377 2.169330 AGACAGGTACTTCCTCCGTTC 58.831 52.381 0.00 0.00 46.24 3.95
432 4378 2.299297 CAAGACAGGTACTTCCTCCGTT 59.701 50.000 0.00 0.00 46.24 4.44
433 4379 1.893801 CAAGACAGGTACTTCCTCCGT 59.106 52.381 0.00 0.00 46.24 4.69
434 4380 1.404315 GCAAGACAGGTACTTCCTCCG 60.404 57.143 0.00 0.00 46.24 4.63
435 4381 1.404315 CGCAAGACAGGTACTTCCTCC 60.404 57.143 0.00 0.00 42.97 4.30
436 4382 1.997669 CGCAAGACAGGTACTTCCTC 58.002 55.000 0.00 0.00 42.97 3.71
437 4383 0.037232 GCGCAAGACAGGTACTTCCT 60.037 55.000 0.30 0.00 45.20 3.36
438 4384 1.352156 CGCGCAAGACAGGTACTTCC 61.352 60.000 8.75 0.00 35.59 3.46
439 4385 1.956620 GCGCGCAAGACAGGTACTTC 61.957 60.000 29.10 0.00 35.59 3.01
440 4386 2.027625 GCGCGCAAGACAGGTACTT 61.028 57.895 29.10 0.00 35.59 2.24
441 4387 2.432628 GCGCGCAAGACAGGTACT 60.433 61.111 29.10 0.00 39.43 2.73
442 4388 3.488090 GGCGCGCAAGACAGGTAC 61.488 66.667 34.42 7.22 43.02 3.34
466 4412 2.353573 GCCCGGTGCTTCCCTTAA 59.646 61.111 0.00 0.00 36.87 1.85
467 4413 4.090588 CGCCCGGTGCTTCCCTTA 62.091 66.667 12.26 0.00 38.05 2.69
516 4462 2.124983 TGAGCCGCTGATTGGAGC 60.125 61.111 0.00 0.00 35.46 4.70
517 4463 1.078918 TGTGAGCCGCTGATTGGAG 60.079 57.895 0.00 0.00 0.00 3.86
518 4464 1.375908 GTGTGAGCCGCTGATTGGA 60.376 57.895 0.00 0.00 0.00 3.53
519 4465 1.672030 TGTGTGAGCCGCTGATTGG 60.672 57.895 0.00 0.00 0.00 3.16
520 4466 1.499056 GTGTGTGAGCCGCTGATTG 59.501 57.895 0.00 0.00 0.00 2.67
521 4467 1.672356 GGTGTGTGAGCCGCTGATT 60.672 57.895 0.00 0.00 0.00 2.57
539 4485 1.133482 GGGGGTCATGATTAGTTGGGG 60.133 57.143 0.00 0.00 0.00 4.96
566 4519 0.752009 TTGGGCAGCGTGTTTGGTTA 60.752 50.000 0.00 0.00 0.00 2.85
567 4520 2.055042 TTGGGCAGCGTGTTTGGTT 61.055 52.632 0.00 0.00 0.00 3.67
568 4521 2.441164 TTGGGCAGCGTGTTTGGT 60.441 55.556 0.00 0.00 0.00 3.67
569 4522 2.027460 GTTGGGCAGCGTGTTTGG 59.973 61.111 0.00 0.00 0.00 3.28
570 4523 2.027460 GGTTGGGCAGCGTGTTTG 59.973 61.111 0.00 0.00 0.00 2.93
571 4524 2.123897 AGGTTGGGCAGCGTGTTT 60.124 55.556 0.00 0.00 0.00 2.83
572 4525 2.906897 CAGGTTGGGCAGCGTGTT 60.907 61.111 0.00 0.00 0.00 3.32
573 4526 2.332312 TAACAGGTTGGGCAGCGTGT 62.332 55.000 0.00 0.00 41.21 4.49
574 4527 1.169661 TTAACAGGTTGGGCAGCGTG 61.170 55.000 0.00 0.00 34.36 5.34
575 4528 1.149627 TTAACAGGTTGGGCAGCGT 59.850 52.632 0.00 0.00 0.00 5.07
601 4554 3.428862 GGGCGGTATCAATTTTGGTCTTG 60.429 47.826 0.00 0.00 0.00 3.02
606 4559 1.775385 AGGGGCGGTATCAATTTTGG 58.225 50.000 0.00 0.00 0.00 3.28
609 4562 2.747135 CGGTTAGGGGCGGTATCAATTT 60.747 50.000 0.00 0.00 0.00 1.82
614 4567 2.030113 GCGGTTAGGGGCGGTATC 59.970 66.667 0.00 0.00 0.00 2.24
638 4591 2.617274 GGTTGGCTCGTGCTGGTTC 61.617 63.158 9.61 0.00 39.59 3.62
639 4592 2.594592 GGTTGGCTCGTGCTGGTT 60.595 61.111 9.61 0.00 39.59 3.67
640 4593 4.988598 CGGTTGGCTCGTGCTGGT 62.989 66.667 9.61 0.00 39.59 4.00
659 4612 4.899239 GATGAGACGCCAGCGGGG 62.899 72.222 17.33 7.55 44.69 5.73
664 4617 4.899239 GGCCCGATGAGACGCCAG 62.899 72.222 0.00 0.00 41.25 4.85
668 4621 4.570663 GGACGGCCCGATGAGACG 62.571 72.222 11.71 0.00 0.00 4.18
669 4622 3.014085 TTGGACGGCCCGATGAGAC 62.014 63.158 11.71 0.00 37.93 3.36
670 4623 2.682136 TTGGACGGCCCGATGAGA 60.682 61.111 11.71 0.00 37.93 3.27
671 4624 2.511600 GTTGGACGGCCCGATGAG 60.512 66.667 11.71 0.00 37.93 2.90
672 4625 4.090588 GGTTGGACGGCCCGATGA 62.091 66.667 11.71 0.00 37.93 2.92
682 4635 4.717313 GTGGAGCGGGGGTTGGAC 62.717 72.222 0.00 0.00 0.00 4.02
683 4636 4.974438 AGTGGAGCGGGGGTTGGA 62.974 66.667 0.00 0.00 0.00 3.53
684 4637 4.410400 GAGTGGAGCGGGGGTTGG 62.410 72.222 0.00 0.00 0.00 3.77
685 4638 4.760047 CGAGTGGAGCGGGGGTTG 62.760 72.222 0.00 0.00 0.00 3.77
689 4642 4.899239 GATGCGAGTGGAGCGGGG 62.899 72.222 0.00 0.00 37.44 5.73
690 4643 4.899239 GGATGCGAGTGGAGCGGG 62.899 72.222 0.00 0.00 37.44 6.13
692 4645 4.193334 TCGGATGCGAGTGGAGCG 62.193 66.667 4.75 0.00 37.44 5.03
693 4646 2.583593 GTCGGATGCGAGTGGAGC 60.584 66.667 10.47 0.00 0.00 4.70
694 4647 2.278206 CGTCGGATGCGAGTGGAG 60.278 66.667 10.47 0.00 0.00 3.86
695 4648 3.822192 CCGTCGGATGCGAGTGGA 61.822 66.667 19.34 0.00 0.00 4.02
729 4682 2.827190 GGTTTCGAATCCGCCCCC 60.827 66.667 9.43 0.00 35.37 5.40
730 4683 3.199891 CGGTTTCGAATCCGCCCC 61.200 66.667 28.88 8.97 40.28 5.80
810 4763 1.269413 CGCGTCGATGTTTATAGGGGT 60.269 52.381 6.48 0.00 0.00 4.95
851 4861 4.088351 GGGGTGGGGAATTGGGGG 62.088 72.222 0.00 0.00 0.00 5.40
877 4887 2.844839 GAGGGTCGGGAGGATGGG 60.845 72.222 0.00 0.00 0.00 4.00
880 4890 0.266152 AGATTGAGGGTCGGGAGGAT 59.734 55.000 0.00 0.00 0.00 3.24
887 4897 0.394565 GGATGGGAGATTGAGGGTCG 59.605 60.000 0.00 0.00 0.00 4.79
888 4898 0.394565 CGGATGGGAGATTGAGGGTC 59.605 60.000 0.00 0.00 0.00 4.46
889 4899 0.031111 TCGGATGGGAGATTGAGGGT 60.031 55.000 0.00 0.00 0.00 4.34
890 4900 0.683973 CTCGGATGGGAGATTGAGGG 59.316 60.000 0.00 0.00 36.08 4.30
891 4901 1.342819 GACTCGGATGGGAGATTGAGG 59.657 57.143 0.00 0.00 37.49 3.86
892 4902 1.342819 GGACTCGGATGGGAGATTGAG 59.657 57.143 0.00 0.00 37.49 3.02
942 5381 2.278857 CGAACCGGAGCGATCAGG 60.279 66.667 18.56 18.56 0.00 3.86
955 5394 0.515717 CGAATTCGTGCGAACCGAAC 60.516 55.000 19.67 0.00 45.89 3.95
990 5429 1.486997 CCAGCATCATCCCTCCCGAT 61.487 60.000 0.00 0.00 0.00 4.18
1361 5815 2.444895 ATGAGAGGAGGCGGGGAC 60.445 66.667 0.00 0.00 0.00 4.46
1374 5828 3.858247 TCACATGAACAGAGCAGATGAG 58.142 45.455 0.00 0.00 0.00 2.90
1429 5884 3.237746 TGAATTCAGCACAATTTGGGGA 58.762 40.909 3.38 0.00 0.00 4.81
1443 5899 2.374184 CGGCCTGGGTAAATGAATTCA 58.626 47.619 11.26 11.26 0.00 2.57
1444 5900 1.681264 CCGGCCTGGGTAAATGAATTC 59.319 52.381 0.00 0.00 0.00 2.17
1453 5909 1.538382 TAACCAACCGGCCTGGGTA 60.538 57.895 23.46 19.62 44.64 3.69
1535 6010 4.091549 ACTCCTACGTGGTTCCAGAAATA 58.908 43.478 0.00 0.00 37.07 1.40
1546 6021 5.618056 TCGCTAAATATACTCCTACGTGG 57.382 43.478 0.00 0.00 37.10 4.94
1562 6037 6.310956 CAAATTCATTTGGAAGCAATCGCTAA 59.689 34.615 4.57 0.00 44.50 3.09
1563 6038 5.806502 CAAATTCATTTGGAAGCAATCGCTA 59.193 36.000 4.57 0.00 44.50 4.26
1613 6088 2.036346 GGCAATTCACTTGGAAGCAACT 59.964 45.455 0.00 0.00 39.30 3.16
1639 6115 5.696724 ACAAAGCAACGCCATAGATAGATAC 59.303 40.000 0.00 0.00 0.00 2.24
1652 6128 1.256117 CAGAGCAAAACAAAGCAACGC 59.744 47.619 0.00 0.00 0.00 4.84
1661 6137 9.677567 GTTACAGATAAAATTCAGAGCAAAACA 57.322 29.630 0.00 0.00 0.00 2.83
1662 6138 9.677567 TGTTACAGATAAAATTCAGAGCAAAAC 57.322 29.630 0.00 0.00 0.00 2.43
1688 6172 3.244875 TGGTGATGTTACCATGAGCTGTT 60.245 43.478 0.00 0.00 45.46 3.16
1708 6192 4.333372 GCCAGGCATATCAAAATTTGTTGG 59.667 41.667 6.55 5.22 30.94 3.77
1741 6225 2.170166 GTGGCCATGGAGTCAAATCAA 58.830 47.619 18.40 0.00 0.00 2.57
1742 6226 1.075212 TGTGGCCATGGAGTCAAATCA 59.925 47.619 18.40 0.00 0.00 2.57
1823 6307 6.249035 GCAAGTGCTACCAAAAATGTACTA 57.751 37.500 0.00 0.00 38.21 1.82
1824 6308 5.121221 GCAAGTGCTACCAAAAATGTACT 57.879 39.130 0.00 0.00 38.21 2.73
1842 6326 4.610945 ACGAAAATTCACTTGGAAGCAAG 58.389 39.130 0.00 0.00 39.30 4.01
1894 6378 7.764443 GCTGTGGTTACATAGTAAATTCAGAGA 59.236 37.037 14.50 0.00 38.04 3.10
1938 6422 3.533547 TGCCAGGCATATCAAAATTTGC 58.466 40.909 11.22 0.00 38.63 3.68
1983 6467 4.822896 AGATTTTTGTTTAGCACCGTGGTA 59.177 37.500 6.34 6.34 0.00 3.25
2103 6588 5.360591 GTCTGTAGAATCATGGTAGTTGGG 58.639 45.833 0.00 0.00 0.00 4.12
2104 6589 5.104941 TGGTCTGTAGAATCATGGTAGTTGG 60.105 44.000 0.00 0.00 0.00 3.77
2105 6590 5.977635 TGGTCTGTAGAATCATGGTAGTTG 58.022 41.667 0.00 0.00 0.00 3.16
2106 6591 6.814954 ATGGTCTGTAGAATCATGGTAGTT 57.185 37.500 0.00 0.00 0.00 2.24
2107 6592 6.814954 AATGGTCTGTAGAATCATGGTAGT 57.185 37.500 0.00 0.00 0.00 2.73
2110 6595 8.906867 CATAAAAATGGTCTGTAGAATCATGGT 58.093 33.333 0.00 0.00 0.00 3.55
2111 6596 9.123902 TCATAAAAATGGTCTGTAGAATCATGG 57.876 33.333 0.00 0.00 0.00 3.66
2154 6797 4.097892 CGCTGATGCTTTATTTTAACCCCT 59.902 41.667 0.00 0.00 36.97 4.79
2159 6802 4.676723 GCCCACGCTGATGCTTTATTTTAA 60.677 41.667 0.00 0.00 36.97 1.52
2161 6804 2.417243 GCCCACGCTGATGCTTTATTTT 60.417 45.455 0.00 0.00 36.97 1.82
2192 6835 0.106569 TGGCATGATTACAGCAGGGG 60.107 55.000 0.00 0.00 0.00 4.79
2196 6839 1.406180 GCACATGGCATGATTACAGCA 59.594 47.619 32.74 0.00 43.97 4.41
2197 6840 1.598676 CGCACATGGCATGATTACAGC 60.599 52.381 32.74 21.66 45.17 4.40
2198 6841 1.672363 ACGCACATGGCATGATTACAG 59.328 47.619 32.74 18.15 45.17 2.74
2199 6842 1.670295 GACGCACATGGCATGATTACA 59.330 47.619 32.74 0.00 45.17 2.41
2200 6843 1.002468 GGACGCACATGGCATGATTAC 60.002 52.381 32.74 17.93 45.17 1.89
2201 6844 1.134128 AGGACGCACATGGCATGATTA 60.134 47.619 32.74 0.00 45.17 1.75
2204 6874 1.450134 GAGGACGCACATGGCATGA 60.450 57.895 32.74 0.00 45.17 3.07
2232 6902 1.371183 CGGTGCCTTCTCTGAACCA 59.629 57.895 0.00 0.00 0.00 3.67
2233 6903 1.376037 CCGGTGCCTTCTCTGAACC 60.376 63.158 0.00 0.00 0.00 3.62
2234 6904 1.376037 CCCGGTGCCTTCTCTGAAC 60.376 63.158 0.00 0.00 0.00 3.18
2236 6906 2.798445 TAGCCCGGTGCCTTCTCTGA 62.798 60.000 10.82 0.00 42.71 3.27
2237 6907 1.690219 ATAGCCCGGTGCCTTCTCTG 61.690 60.000 10.82 0.00 42.71 3.35
2238 6908 1.383248 ATAGCCCGGTGCCTTCTCT 60.383 57.895 10.82 0.00 42.71 3.10
2239 6909 1.069935 GATAGCCCGGTGCCTTCTC 59.930 63.158 10.82 1.03 42.71 2.87
2240 6910 1.056700 ATGATAGCCCGGTGCCTTCT 61.057 55.000 10.82 0.00 42.71 2.85
2242 6912 0.258774 AAATGATAGCCCGGTGCCTT 59.741 50.000 10.82 0.00 42.71 4.35
2249 6919 3.996150 ATGAGCAAAAATGATAGCCCG 57.004 42.857 0.00 0.00 0.00 6.13
2258 6928 6.815142 GGCAAGACTAATGAATGAGCAAAAAT 59.185 34.615 0.00 0.00 0.00 1.82
2319 6990 0.393537 AGCTCCAGCATACAACAGCC 60.394 55.000 0.48 0.00 45.16 4.85
2321 6992 2.005451 GTCAGCTCCAGCATACAACAG 58.995 52.381 0.48 0.00 45.16 3.16
2330 7001 0.599558 TGCAAAATGTCAGCTCCAGC 59.400 50.000 0.00 0.00 42.49 4.85
2332 7003 1.689984 TGTGCAAAATGTCAGCTCCA 58.310 45.000 0.00 0.00 0.00 3.86
2334 7005 2.229543 TGGATGTGCAAAATGTCAGCTC 59.770 45.455 0.00 0.00 0.00 4.09
2335 7006 2.241160 TGGATGTGCAAAATGTCAGCT 58.759 42.857 0.00 0.00 0.00 4.24
2430 7102 1.761198 TGGAGCTCTGTCTCATGGATG 59.239 52.381 14.64 0.00 34.84 3.51
2436 7108 2.244486 AATCCTGGAGCTCTGTCTCA 57.756 50.000 14.64 1.26 34.84 3.27
2472 7144 3.506096 CGGATGCAGCTGCCAGTG 61.506 66.667 34.64 18.68 41.18 3.66
2583 7255 0.466189 CAAGCCTTGGTCTGGTGTGT 60.466 55.000 0.00 0.00 0.00 3.72
2585 7257 1.151450 CCAAGCCTTGGTCTGGTGT 59.849 57.895 15.63 0.00 45.93 4.16
2605 7280 3.632189 AGAAAATTGAACAGCGCAAGTC 58.368 40.909 11.47 3.41 41.68 3.01
2610 7285 4.627467 TCTCTAGAGAAAATTGAACAGCGC 59.373 41.667 20.31 0.00 33.91 5.92
2611 7286 6.712241 TTCTCTAGAGAAAATTGAACAGCG 57.288 37.500 28.93 0.00 43.79 5.18
2629 7304 4.063689 CAGTCACACAGCTCAATTTCTCT 58.936 43.478 0.00 0.00 0.00 3.10
2630 7305 4.060900 TCAGTCACACAGCTCAATTTCTC 58.939 43.478 0.00 0.00 0.00 2.87
2648 7323 4.099266 TGGCAAAACAATAAACAGCTCAGT 59.901 37.500 0.00 0.00 0.00 3.41
2660 7335 2.114616 TCACCTGGTTGGCAAAACAAT 58.885 42.857 0.00 0.00 40.22 2.71
2681 7356 9.933723 TCTATTATGACATCAATGTACTCATGG 57.066 33.333 0.00 0.00 41.95 3.66
2718 7393 4.135153 CAGACGCTCTGGACCCGG 62.135 72.222 0.00 0.00 40.71 5.73
2825 7500 2.742372 CTTGGAAGGGTGCCGACG 60.742 66.667 0.00 0.00 0.00 5.12
2915 7590 1.381327 GGACAGGGATCTCCACGGA 60.381 63.158 0.00 0.00 38.24 4.69
2918 7593 1.062810 AGGTAGGACAGGGATCTCCAC 60.063 57.143 1.91 0.00 38.24 4.02
2967 7642 0.677731 TCAGATTGCAGGCCTTTCCG 60.678 55.000 0.00 0.00 40.77 4.30
2981 7656 1.627329 TGGAACTCTTGCTGCTCAGAT 59.373 47.619 0.00 0.00 0.00 2.90
3032 7707 3.720601 AGCCGCTTCAGATGCCCA 61.721 61.111 2.77 0.00 0.00 5.36
3066 7741 0.601558 CTTCCGGTCTCGAGTTCCAA 59.398 55.000 21.86 12.69 39.00 3.53
3119 7794 1.274167 TCGTACATTGCCGTCCTCTTT 59.726 47.619 0.00 0.00 0.00 2.52
3192 7867 4.140686 AGACCCTCTCCTTTTCCCAAAAAT 60.141 41.667 0.00 0.00 34.00 1.82
3197 7874 2.133858 AAGACCCTCTCCTTTTCCCA 57.866 50.000 0.00 0.00 0.00 4.37
3279 7958 1.203187 TGTAACCTGCACTCTCCTCCT 60.203 52.381 0.00 0.00 0.00 3.69
3433 8117 4.968181 GGAAAGTTTTGTAACAACTCTCGC 59.032 41.667 0.00 0.00 36.70 5.03
3540 8229 5.186198 AGTATCATTTCCTTCGGAACCAAG 58.814 41.667 0.00 0.00 41.87 3.61
3577 8266 5.058490 CCAAAACACCAGCATTTGATCTTT 58.942 37.500 0.00 0.00 36.41 2.52
3616 8305 2.080286 AATATACATCGGCGAGTGGC 57.920 50.000 17.22 0.00 42.51 5.01
3718 8416 3.028366 GCCGCTGTCGCTTCTTTCC 62.028 63.158 0.00 0.00 0.00 3.13
3746 8451 4.684242 ACACGCCACATGATAACATATACG 59.316 41.667 0.00 0.00 35.09 3.06
3758 8463 2.196749 GATCTAGTGACACGCCACATG 58.803 52.381 0.00 0.00 39.42 3.21
3761 8466 0.525668 CGGATCTAGTGACACGCCAC 60.526 60.000 0.00 0.00 37.32 5.01
3762 8467 0.678684 TCGGATCTAGTGACACGCCA 60.679 55.000 0.00 0.00 0.00 5.69
3763 8468 0.029567 CTCGGATCTAGTGACACGCC 59.970 60.000 0.00 0.00 0.00 5.68
3764 8469 1.003331 CTCTCGGATCTAGTGACACGC 60.003 57.143 0.00 0.00 0.00 5.34
3765 8470 1.600013 CCTCTCGGATCTAGTGACACG 59.400 57.143 0.00 0.00 0.00 4.49
3766 8471 1.950909 CCCTCTCGGATCTAGTGACAC 59.049 57.143 0.00 0.00 0.00 3.67
3767 8472 1.844497 TCCCTCTCGGATCTAGTGACA 59.156 52.381 0.00 0.00 34.86 3.58
3777 8489 6.666998 CTTTCCGTAAAGTATCCCTCTCGGA 61.667 48.000 0.00 0.00 42.94 4.55
3779 8491 4.337555 TCTTTCCGTAAAGTATCCCTCTCG 59.662 45.833 0.08 0.00 42.36 4.04
3783 8495 4.163649 CCCTTCTTTCCGTAAAGTATCCCT 59.836 45.833 0.08 0.00 42.36 4.20
3787 8499 4.106324 TCCCCCTTCTTTCCGTAAAGTAT 58.894 43.478 0.08 0.00 42.36 2.12
3789 8501 2.341695 TCCCCCTTCTTTCCGTAAAGT 58.658 47.619 0.08 0.00 42.36 2.66
3820 8555 6.712547 TCTCCTTTTCTCAATGTTCCTTTCTC 59.287 38.462 0.00 0.00 0.00 2.87
3825 8560 4.704057 GCATCTCCTTTTCTCAATGTTCCT 59.296 41.667 0.00 0.00 0.00 3.36
3826 8561 4.460382 TGCATCTCCTTTTCTCAATGTTCC 59.540 41.667 0.00 0.00 0.00 3.62
3827 8562 5.392811 CCTGCATCTCCTTTTCTCAATGTTC 60.393 44.000 0.00 0.00 0.00 3.18
3828 8563 4.461781 CCTGCATCTCCTTTTCTCAATGTT 59.538 41.667 0.00 0.00 0.00 2.71
3829 8564 4.015084 CCTGCATCTCCTTTTCTCAATGT 58.985 43.478 0.00 0.00 0.00 2.71
3830 8565 4.015084 ACCTGCATCTCCTTTTCTCAATG 58.985 43.478 0.00 0.00 0.00 2.82
3831 8566 4.313020 ACCTGCATCTCCTTTTCTCAAT 57.687 40.909 0.00 0.00 0.00 2.57
3872 9463 1.626356 CGAGAGCCAGGGGGAATCAA 61.626 60.000 0.00 0.00 35.59 2.57
3874 9465 2.825264 CGAGAGCCAGGGGGAATC 59.175 66.667 0.00 0.00 35.59 2.52
3947 9552 1.748122 GCAGTGGATGGGCAGACAG 60.748 63.158 0.00 0.00 0.00 3.51
4070 9678 2.002586 CATGAACACCCAAGCGACTAG 58.997 52.381 0.00 0.00 0.00 2.57
4071 9679 1.346395 ACATGAACACCCAAGCGACTA 59.654 47.619 0.00 0.00 0.00 2.59
4072 9680 0.108585 ACATGAACACCCAAGCGACT 59.891 50.000 0.00 0.00 0.00 4.18
4073 9681 0.517316 GACATGAACACCCAAGCGAC 59.483 55.000 0.00 0.00 0.00 5.19
4108 9716 6.465084 ACTGTAATAGGTCTGAAGTGTTTCC 58.535 40.000 0.00 0.00 32.09 3.13
4109 9717 7.964604 AACTGTAATAGGTCTGAAGTGTTTC 57.035 36.000 0.00 0.00 0.00 2.78
4110 9718 9.841295 TTAAACTGTAATAGGTCTGAAGTGTTT 57.159 29.630 0.00 0.00 0.00 2.83
4111 9719 9.269453 GTTAAACTGTAATAGGTCTGAAGTGTT 57.731 33.333 0.00 0.00 0.00 3.32
4112 9720 8.648693 AGTTAAACTGTAATAGGTCTGAAGTGT 58.351 33.333 0.00 0.00 0.00 3.55
4115 9723 9.804758 CCTAGTTAAACTGTAATAGGTCTGAAG 57.195 37.037 0.00 0.00 0.00 3.02
4116 9724 9.537852 TCCTAGTTAAACTGTAATAGGTCTGAA 57.462 33.333 3.36 0.00 33.13 3.02
4117 9725 9.186837 CTCCTAGTTAAACTGTAATAGGTCTGA 57.813 37.037 3.36 0.00 33.13 3.27
4118 9726 7.921745 GCTCCTAGTTAAACTGTAATAGGTCTG 59.078 40.741 3.36 0.00 33.13 3.51
4119 9727 7.618512 TGCTCCTAGTTAAACTGTAATAGGTCT 59.381 37.037 3.36 0.00 33.13 3.85
4120 9728 7.779073 TGCTCCTAGTTAAACTGTAATAGGTC 58.221 38.462 3.36 0.00 33.13 3.85
4121 9729 7.729124 TGCTCCTAGTTAAACTGTAATAGGT 57.271 36.000 3.36 0.00 33.13 3.08
4128 9736 9.515226 TTCATTTATTGCTCCTAGTTAAACTGT 57.485 29.630 0.00 0.00 0.00 3.55


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.