Multiple sequence alignment - TraesCS3A01G530500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G530500 chr3A 100.000 2285 0 0 1 2285 743711605 743709321 0.000000e+00 4220.0
1 TraesCS3A01G530500 chr3A 99.784 464 0 1 1 463 743720206 743719743 0.000000e+00 850.0
2 TraesCS3A01G530500 chr3A 95.087 346 17 0 464 809 83522520 83522175 1.540000e-151 545.0
3 TraesCS3A01G530500 chr3A 87.310 197 13 1 1354 1550 83522178 83521994 4.940000e-52 215.0
4 TraesCS3A01G530500 chr5D 92.378 1089 75 5 465 1550 494865207 494864124 0.000000e+00 1544.0
5 TraesCS3A01G530500 chr5D 92.378 1089 74 6 465 1550 353696064 353697146 0.000000e+00 1543.0
6 TraesCS3A01G530500 chr1B 91.792 731 59 1 762 1492 388170114 388169385 0.000000e+00 1016.0
7 TraesCS3A01G530500 chr1B 91.108 731 65 0 762 1492 394375087 394375817 0.000000e+00 990.0
8 TraesCS3A01G530500 chr7A 91.257 732 62 2 762 1492 6752216 6751486 0.000000e+00 996.0
9 TraesCS3A01G530500 chr7A 93.923 362 18 2 464 821 287557110 287556749 5.550000e-151 544.0
10 TraesCS3A01G530500 chr7A 94.071 253 11 2 465 715 670290579 670290329 4.610000e-102 381.0
11 TraesCS3A01G530500 chr7A 81.884 414 56 16 1713 2121 14966121 14965722 4.700000e-87 331.0
12 TraesCS3A01G530500 chr6B 90.834 731 66 1 762 1492 717061787 717062516 0.000000e+00 977.0
13 TraesCS3A01G530500 chr6B 95.082 61 3 0 1491 1551 74059363 74059423 1.870000e-16 97.1
14 TraesCS3A01G530500 chr2B 90.834 731 66 1 762 1492 798711305 798710576 0.000000e+00 977.0
15 TraesCS3A01G530500 chr2B 97.655 469 5 6 1 464 709563288 709563755 0.000000e+00 800.0
16 TraesCS3A01G530500 chr2B 97.845 464 6 4 4 464 269188762 269188300 0.000000e+00 798.0
17 TraesCS3A01G530500 chr2B 97.624 463 7 4 4 463 269196926 269196465 0.000000e+00 791.0
18 TraesCS3A01G530500 chr2B 97.425 466 7 5 4 465 309932953 309933417 0.000000e+00 789.0
19 TraesCS3A01G530500 chr2B 90.608 543 24 8 1548 2088 760870183 760870700 0.000000e+00 695.0
20 TraesCS3A01G530500 chr2B 79.973 749 116 17 1551 2285 752953962 752953234 2.600000e-144 521.0
21 TraesCS3A01G530500 chr2B 81.443 388 57 8 1548 1928 630511467 630511088 1.030000e-78 303.0
22 TraesCS3A01G530500 chr2B 89.950 199 13 1 2094 2285 760870939 760871137 1.360000e-62 250.0
23 TraesCS3A01G530500 chr1A 90.834 731 66 1 762 1492 579648295 579649024 0.000000e+00 977.0
24 TraesCS3A01G530500 chr1A 96.667 60 2 0 1491 1550 286593101 286593042 1.440000e-17 100.0
25 TraesCS3A01G530500 chr3D 90.698 731 67 1 762 1492 516529378 516528649 0.000000e+00 972.0
26 TraesCS3A01G530500 chr5B 98.287 467 3 5 1 463 636122481 636122946 0.000000e+00 813.0
27 TraesCS3A01G530500 chr5B 97.863 468 4 5 1 463 636130624 636131090 0.000000e+00 804.0
28 TraesCS3A01G530500 chr4B 97.430 467 7 5 3 466 83193735 83193271 0.000000e+00 791.0
29 TraesCS3A01G530500 chr4B 95.977 174 3 3 542 715 41575538 41575369 1.730000e-71 279.0
30 TraesCS3A01G530500 chr4B 83.389 301 43 7 1549 1847 427703966 427704261 2.890000e-69 272.0
31 TraesCS3A01G530500 chr2A 97.629 464 6 5 3 463 186658457 186657996 0.000000e+00 791.0
32 TraesCS3A01G530500 chr2A 92.837 363 21 2 464 821 770919921 770920283 2.600000e-144 521.0
33 TraesCS3A01G530500 chr2A 79.352 586 93 17 1549 2121 557275413 557274843 9.900000e-104 387.0
34 TraesCS3A01G530500 chr2A 89.011 91 10 0 479 569 690230345 690230255 1.860000e-21 113.0
35 TraesCS3A01G530500 chr3B 85.112 759 80 21 1548 2285 730899835 730900581 0.000000e+00 745.0
36 TraesCS3A01G530500 chr3B 88.889 252 3 6 464 715 44402628 44402402 1.030000e-73 287.0
37 TraesCS3A01G530500 chr3B 89.535 86 7 2 484 569 70106293 70106376 8.630000e-20 108.0
38 TraesCS3A01G530500 chr4D 81.649 752 111 15 1549 2285 336888526 336889265 1.170000e-167 599.0
39 TraesCS3A01G530500 chr4A 83.333 654 75 21 1655 2285 673720561 673719919 7.080000e-160 573.0
40 TraesCS3A01G530500 chr4A 83.333 654 75 21 1655 2285 673726808 673726166 7.080000e-160 573.0
41 TraesCS3A01G530500 chr2D 80.294 680 84 25 1552 2220 443732943 443732303 3.440000e-128 468.0
42 TraesCS3A01G530500 chr7B 88.095 252 5 4 464 715 436089108 436089334 2.240000e-70 276.0
43 TraesCS3A01G530500 chr7D 89.109 101 9 2 470 569 80268733 80268832 8.570000e-25 124.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G530500 chr3A 743709321 743711605 2284 True 4220.0 4220 100.0000 1 2285 1 chr3A.!!$R1 2284
1 TraesCS3A01G530500 chr3A 83521994 83522520 526 True 380.0 545 91.1985 464 1550 2 chr3A.!!$R3 1086
2 TraesCS3A01G530500 chr5D 494864124 494865207 1083 True 1544.0 1544 92.3780 465 1550 1 chr5D.!!$R1 1085
3 TraesCS3A01G530500 chr5D 353696064 353697146 1082 False 1543.0 1543 92.3780 465 1550 1 chr5D.!!$F1 1085
4 TraesCS3A01G530500 chr1B 388169385 388170114 729 True 1016.0 1016 91.7920 762 1492 1 chr1B.!!$R1 730
5 TraesCS3A01G530500 chr1B 394375087 394375817 730 False 990.0 990 91.1080 762 1492 1 chr1B.!!$F1 730
6 TraesCS3A01G530500 chr7A 6751486 6752216 730 True 996.0 996 91.2570 762 1492 1 chr7A.!!$R1 730
7 TraesCS3A01G530500 chr6B 717061787 717062516 729 False 977.0 977 90.8340 762 1492 1 chr6B.!!$F2 730
8 TraesCS3A01G530500 chr2B 798710576 798711305 729 True 977.0 977 90.8340 762 1492 1 chr2B.!!$R5 730
9 TraesCS3A01G530500 chr2B 752953234 752953962 728 True 521.0 521 79.9730 1551 2285 1 chr2B.!!$R4 734
10 TraesCS3A01G530500 chr2B 760870183 760871137 954 False 472.5 695 90.2790 1548 2285 2 chr2B.!!$F3 737
11 TraesCS3A01G530500 chr1A 579648295 579649024 729 False 977.0 977 90.8340 762 1492 1 chr1A.!!$F1 730
12 TraesCS3A01G530500 chr3D 516528649 516529378 729 True 972.0 972 90.6980 762 1492 1 chr3D.!!$R1 730
13 TraesCS3A01G530500 chr2A 557274843 557275413 570 True 387.0 387 79.3520 1549 2121 1 chr2A.!!$R2 572
14 TraesCS3A01G530500 chr3B 730899835 730900581 746 False 745.0 745 85.1120 1548 2285 1 chr3B.!!$F2 737
15 TraesCS3A01G530500 chr4D 336888526 336889265 739 False 599.0 599 81.6490 1549 2285 1 chr4D.!!$F1 736
16 TraesCS3A01G530500 chr4A 673719919 673720561 642 True 573.0 573 83.3330 1655 2285 1 chr4A.!!$R1 630
17 TraesCS3A01G530500 chr4A 673726166 673726808 642 True 573.0 573 83.3330 1655 2285 1 chr4A.!!$R2 630
18 TraesCS3A01G530500 chr2D 443732303 443732943 640 True 468.0 468 80.2940 1552 2220 1 chr2D.!!$R1 668

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
448 449 0.103937 GCCTAGAGCACTACCAGCAG 59.896 60.0 0.0 0.0 42.97 4.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1795 1815 2.02911 TGGCTCCATAAAGCAGCAAAAC 60.029 45.455 0.0 0.0 44.35 2.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 9.606631 TGTTTTATTTAATTCTTTTGCCACTGT 57.393 25.926 0.00 0.00 0.00 3.55
58 59 8.729805 ATTTAATTCTTTTGCCACTGTTTTGA 57.270 26.923 0.00 0.00 0.00 2.69
59 60 8.553459 TTTAATTCTTTTGCCACTGTTTTGAA 57.447 26.923 0.00 0.00 0.00 2.69
60 61 8.729805 TTAATTCTTTTGCCACTGTTTTGAAT 57.270 26.923 0.00 0.00 0.00 2.57
61 62 7.628769 AATTCTTTTGCCACTGTTTTGAATT 57.371 28.000 0.00 0.00 0.00 2.17
62 63 8.729805 AATTCTTTTGCCACTGTTTTGAATTA 57.270 26.923 0.00 0.00 32.23 1.40
63 64 8.729805 ATTCTTTTGCCACTGTTTTGAATTAA 57.270 26.923 0.00 0.00 0.00 1.40
64 65 8.553459 TTCTTTTGCCACTGTTTTGAATTAAA 57.447 26.923 0.00 0.00 0.00 1.52
65 66 8.553459 TCTTTTGCCACTGTTTTGAATTAAAA 57.447 26.923 0.00 0.00 35.96 1.52
66 67 9.003658 TCTTTTGCCACTGTTTTGAATTAAAAA 57.996 25.926 0.00 0.00 39.79 1.94
67 68 9.786105 CTTTTGCCACTGTTTTGAATTAAAAAT 57.214 25.926 3.99 0.00 39.79 1.82
91 92 9.452287 AATAATAATTCAAACAATGCCAAAGCT 57.548 25.926 0.00 0.00 40.80 3.74
92 93 6.973229 ATAATTCAAACAATGCCAAAGCTC 57.027 33.333 0.00 0.00 40.80 4.09
93 94 2.818130 TCAAACAATGCCAAAGCTCC 57.182 45.000 0.00 0.00 40.80 4.70
94 95 2.318908 TCAAACAATGCCAAAGCTCCT 58.681 42.857 0.00 0.00 40.80 3.69
95 96 2.297033 TCAAACAATGCCAAAGCTCCTC 59.703 45.455 0.00 0.00 40.80 3.71
96 97 2.298163 CAAACAATGCCAAAGCTCCTCT 59.702 45.455 0.00 0.00 40.80 3.69
97 98 1.542492 ACAATGCCAAAGCTCCTCTG 58.458 50.000 0.00 0.00 40.80 3.35
98 99 1.074405 ACAATGCCAAAGCTCCTCTGA 59.926 47.619 0.00 0.00 40.80 3.27
99 100 2.165167 CAATGCCAAAGCTCCTCTGAA 58.835 47.619 0.00 0.00 40.80 3.02
100 101 2.758979 CAATGCCAAAGCTCCTCTGAAT 59.241 45.455 0.00 0.00 40.80 2.57
101 102 3.939740 ATGCCAAAGCTCCTCTGAATA 57.060 42.857 0.00 0.00 40.80 1.75
102 103 3.939740 TGCCAAAGCTCCTCTGAATAT 57.060 42.857 0.00 0.00 40.80 1.28
103 104 4.240881 TGCCAAAGCTCCTCTGAATATT 57.759 40.909 0.00 0.00 40.80 1.28
104 105 4.603131 TGCCAAAGCTCCTCTGAATATTT 58.397 39.130 0.00 0.00 40.80 1.40
105 106 5.018809 TGCCAAAGCTCCTCTGAATATTTT 58.981 37.500 0.00 0.00 40.80 1.82
106 107 6.186957 TGCCAAAGCTCCTCTGAATATTTTA 58.813 36.000 0.00 0.00 40.80 1.52
107 108 6.835488 TGCCAAAGCTCCTCTGAATATTTTAT 59.165 34.615 0.00 0.00 40.80 1.40
108 109 7.998383 TGCCAAAGCTCCTCTGAATATTTTATA 59.002 33.333 0.00 0.00 40.80 0.98
109 110 9.018582 GCCAAAGCTCCTCTGAATATTTTATAT 57.981 33.333 0.00 0.00 35.50 0.86
113 114 9.804977 AAGCTCCTCTGAATATTTTATATTGCT 57.195 29.630 0.00 0.00 0.00 3.91
152 153 9.546428 CCAAAAGCTTATAAAATATTTCTGGGG 57.454 33.333 0.00 0.00 0.00 4.96
225 226 8.011844 AGCTAATGAATTAAATCCAAAGTCCC 57.988 34.615 0.00 0.00 0.00 4.46
226 227 7.619302 AGCTAATGAATTAAATCCAAAGTCCCA 59.381 33.333 0.00 0.00 0.00 4.37
227 228 8.257306 GCTAATGAATTAAATCCAAAGTCCCAA 58.743 33.333 0.00 0.00 0.00 4.12
230 231 9.859152 AATGAATTAAATCCAAAGTCCCAAAAA 57.141 25.926 0.00 0.00 0.00 1.94
237 238 8.862325 AAATCCAAAGTCCCAAAAATAATTCC 57.138 30.769 0.00 0.00 0.00 3.01
238 239 7.813087 ATCCAAAGTCCCAAAAATAATTCCT 57.187 32.000 0.00 0.00 0.00 3.36
239 240 7.625498 TCCAAAGTCCCAAAAATAATTCCTT 57.375 32.000 0.00 0.00 0.00 3.36
240 241 8.728596 TCCAAAGTCCCAAAAATAATTCCTTA 57.271 30.769 0.00 0.00 0.00 2.69
241 242 9.160412 TCCAAAGTCCCAAAAATAATTCCTTAA 57.840 29.630 0.00 0.00 0.00 1.85
242 243 9.785982 CCAAAGTCCCAAAAATAATTCCTTAAA 57.214 29.630 0.00 0.00 0.00 1.52
265 266 8.986929 AAAAATGTTCAATATTTTGGTTGGGA 57.013 26.923 5.68 0.00 37.68 4.37
266 267 7.977789 AAATGTTCAATATTTTGGTTGGGAC 57.022 32.000 0.00 0.00 33.44 4.46
267 268 5.476091 TGTTCAATATTTTGGTTGGGACC 57.524 39.130 0.00 0.00 46.71 4.46
275 276 3.589139 GGTTGGGACCAGAACCCT 58.411 61.111 11.95 0.00 46.82 4.34
276 277 1.851267 GGTTGGGACCAGAACCCTT 59.149 57.895 11.95 0.00 46.82 3.95
277 278 1.069775 GGTTGGGACCAGAACCCTTA 58.930 55.000 11.95 0.00 46.82 2.69
278 279 1.271762 GGTTGGGACCAGAACCCTTAC 60.272 57.143 11.95 0.00 46.82 2.34
279 280 1.069775 TTGGGACCAGAACCCTTACC 58.930 55.000 0.00 0.00 46.82 2.85
280 281 0.104356 TGGGACCAGAACCCTTACCA 60.104 55.000 0.00 0.00 46.82 3.25
281 282 1.069775 GGGACCAGAACCCTTACCAA 58.930 55.000 0.00 0.00 43.65 3.67
282 283 1.426215 GGGACCAGAACCCTTACCAAA 59.574 52.381 0.00 0.00 43.65 3.28
283 284 2.158430 GGGACCAGAACCCTTACCAAAA 60.158 50.000 0.00 0.00 43.65 2.44
284 285 3.568443 GGACCAGAACCCTTACCAAAAA 58.432 45.455 0.00 0.00 0.00 1.94
285 286 4.157246 GGACCAGAACCCTTACCAAAAAT 58.843 43.478 0.00 0.00 0.00 1.82
286 287 4.219944 GGACCAGAACCCTTACCAAAAATC 59.780 45.833 0.00 0.00 0.00 2.17
287 288 4.810345 ACCAGAACCCTTACCAAAAATCA 58.190 39.130 0.00 0.00 0.00 2.57
288 289 5.402630 ACCAGAACCCTTACCAAAAATCAT 58.597 37.500 0.00 0.00 0.00 2.45
289 290 5.480422 ACCAGAACCCTTACCAAAAATCATC 59.520 40.000 0.00 0.00 0.00 2.92
290 291 5.480073 CCAGAACCCTTACCAAAAATCATCA 59.520 40.000 0.00 0.00 0.00 3.07
291 292 6.014669 CCAGAACCCTTACCAAAAATCATCAA 60.015 38.462 0.00 0.00 0.00 2.57
292 293 7.441017 CAGAACCCTTACCAAAAATCATCAAA 58.559 34.615 0.00 0.00 0.00 2.69
293 294 7.384932 CAGAACCCTTACCAAAAATCATCAAAC 59.615 37.037 0.00 0.00 0.00 2.93
294 295 6.739331 ACCCTTACCAAAAATCATCAAACA 57.261 33.333 0.00 0.00 0.00 2.83
295 296 7.315066 ACCCTTACCAAAAATCATCAAACAT 57.685 32.000 0.00 0.00 0.00 2.71
296 297 7.744733 ACCCTTACCAAAAATCATCAAACATT 58.255 30.769 0.00 0.00 0.00 2.71
297 298 8.217111 ACCCTTACCAAAAATCATCAAACATTT 58.783 29.630 0.00 0.00 0.00 2.32
298 299 9.717942 CCCTTACCAAAAATCATCAAACATTTA 57.282 29.630 0.00 0.00 0.00 1.40
306 307 9.964303 AAAAATCATCAAACATTTAAAAAGGGC 57.036 25.926 0.00 0.00 0.00 5.19
307 308 8.688747 AAATCATCAAACATTTAAAAAGGGCA 57.311 26.923 0.00 0.00 0.00 5.36
308 309 8.866970 AATCATCAAACATTTAAAAAGGGCAT 57.133 26.923 0.00 0.00 0.00 4.40
309 310 8.866970 ATCATCAAACATTTAAAAAGGGCATT 57.133 26.923 0.00 0.00 0.00 3.56
310 311 8.688747 TCATCAAACATTTAAAAAGGGCATTT 57.311 26.923 0.00 0.00 0.00 2.32
311 312 9.129532 TCATCAAACATTTAAAAAGGGCATTTT 57.870 25.926 3.70 3.70 43.04 1.82
318 319 3.574354 AAAAAGGGCATTTTTGGAGCA 57.426 38.095 20.35 0.00 46.80 4.26
319 320 3.574354 AAAAGGGCATTTTTGGAGCAA 57.426 38.095 3.70 0.00 37.89 3.91
320 321 3.793819 AAAGGGCATTTTTGGAGCAAT 57.206 38.095 0.00 0.00 0.00 3.56
321 322 2.773993 AGGGCATTTTTGGAGCAATG 57.226 45.000 0.00 0.00 34.09 2.82
322 323 2.259012 AGGGCATTTTTGGAGCAATGA 58.741 42.857 0.00 0.00 32.91 2.57
323 324 2.638855 AGGGCATTTTTGGAGCAATGAA 59.361 40.909 0.00 0.00 32.91 2.57
324 325 3.264964 AGGGCATTTTTGGAGCAATGAAT 59.735 39.130 0.00 0.00 32.91 2.57
325 326 3.375922 GGGCATTTTTGGAGCAATGAATG 59.624 43.478 0.00 0.00 33.97 2.67
326 327 4.255301 GGCATTTTTGGAGCAATGAATGA 58.745 39.130 0.30 0.00 33.31 2.57
327 328 4.331717 GGCATTTTTGGAGCAATGAATGAG 59.668 41.667 0.30 0.00 33.31 2.90
328 329 5.172934 GCATTTTTGGAGCAATGAATGAGA 58.827 37.500 0.30 0.00 33.31 3.27
329 330 5.063060 GCATTTTTGGAGCAATGAATGAGAC 59.937 40.000 0.30 0.00 33.31 3.36
330 331 6.395629 CATTTTTGGAGCAATGAATGAGACT 58.604 36.000 0.00 0.00 33.31 3.24
331 332 6.409524 TTTTTGGAGCAATGAATGAGACTT 57.590 33.333 0.00 0.00 0.00 3.01
332 333 5.633830 TTTGGAGCAATGAATGAGACTTC 57.366 39.130 0.00 0.00 0.00 3.01
333 334 3.614092 TGGAGCAATGAATGAGACTTCC 58.386 45.455 0.00 0.00 0.00 3.46
334 335 3.009363 TGGAGCAATGAATGAGACTTCCA 59.991 43.478 0.00 0.00 0.00 3.53
335 336 3.626670 GGAGCAATGAATGAGACTTCCAG 59.373 47.826 0.00 0.00 0.00 3.86
336 337 3.618351 AGCAATGAATGAGACTTCCAGG 58.382 45.455 0.00 0.00 0.00 4.45
337 338 2.686915 GCAATGAATGAGACTTCCAGGG 59.313 50.000 0.00 0.00 0.00 4.45
338 339 3.875369 GCAATGAATGAGACTTCCAGGGT 60.875 47.826 0.00 0.00 0.00 4.34
339 340 4.338879 CAATGAATGAGACTTCCAGGGTT 58.661 43.478 0.00 0.00 0.00 4.11
340 341 4.664688 ATGAATGAGACTTCCAGGGTTT 57.335 40.909 0.00 0.00 0.00 3.27
341 342 4.453480 TGAATGAGACTTCCAGGGTTTT 57.547 40.909 0.00 0.00 0.00 2.43
342 343 4.803452 TGAATGAGACTTCCAGGGTTTTT 58.197 39.130 0.00 0.00 0.00 1.94
343 344 4.584325 TGAATGAGACTTCCAGGGTTTTTG 59.416 41.667 0.00 0.00 0.00 2.44
344 345 2.306847 TGAGACTTCCAGGGTTTTTGC 58.693 47.619 0.00 0.00 0.00 3.68
345 346 1.613925 GAGACTTCCAGGGTTTTTGCC 59.386 52.381 0.00 0.00 0.00 4.52
356 357 4.634012 GGGTTTTTGCCCCTCTTTTATT 57.366 40.909 0.00 0.00 42.89 1.40
357 358 4.980573 GGGTTTTTGCCCCTCTTTTATTT 58.019 39.130 0.00 0.00 42.89 1.40
358 359 6.116711 GGGTTTTTGCCCCTCTTTTATTTA 57.883 37.500 0.00 0.00 42.89 1.40
359 360 6.535540 GGGTTTTTGCCCCTCTTTTATTTAA 58.464 36.000 0.00 0.00 42.89 1.52
360 361 6.653320 GGGTTTTTGCCCCTCTTTTATTTAAG 59.347 38.462 0.00 0.00 42.89 1.85
361 362 7.221450 GGTTTTTGCCCCTCTTTTATTTAAGT 58.779 34.615 0.00 0.00 0.00 2.24
362 363 7.717875 GGTTTTTGCCCCTCTTTTATTTAAGTT 59.282 33.333 0.00 0.00 0.00 2.66
363 364 9.116067 GTTTTTGCCCCTCTTTTATTTAAGTTT 57.884 29.630 0.00 0.00 0.00 2.66
364 365 9.688091 TTTTTGCCCCTCTTTTATTTAAGTTTT 57.312 25.926 0.00 0.00 0.00 2.43
365 366 9.688091 TTTTGCCCCTCTTTTATTTAAGTTTTT 57.312 25.926 0.00 0.00 0.00 1.94
366 367 8.669946 TTGCCCCTCTTTTATTTAAGTTTTTG 57.330 30.769 0.00 0.00 0.00 2.44
367 368 8.024145 TGCCCCTCTTTTATTTAAGTTTTTGA 57.976 30.769 0.00 0.00 0.00 2.69
368 369 8.147704 TGCCCCTCTTTTATTTAAGTTTTTGAG 58.852 33.333 0.00 0.00 0.00 3.02
369 370 7.602644 GCCCCTCTTTTATTTAAGTTTTTGAGG 59.397 37.037 0.00 0.00 37.63 3.86
370 371 7.602644 CCCCTCTTTTATTTAAGTTTTTGAGGC 59.397 37.037 0.00 0.00 36.85 4.70
371 372 8.367911 CCCTCTTTTATTTAAGTTTTTGAGGCT 58.632 33.333 0.00 0.00 36.85 4.58
372 373 9.764363 CCTCTTTTATTTAAGTTTTTGAGGCTT 57.236 29.630 0.00 0.00 32.36 4.35
374 375 9.758651 TCTTTTATTTAAGTTTTTGAGGCTTCC 57.241 29.630 0.00 0.00 0.00 3.46
375 376 9.541143 CTTTTATTTAAGTTTTTGAGGCTTCCA 57.459 29.630 0.00 0.00 0.00 3.53
376 377 9.892130 TTTTATTTAAGTTTTTGAGGCTTCCAA 57.108 25.926 0.00 0.00 0.00 3.53
377 378 9.892130 TTTATTTAAGTTTTTGAGGCTTCCAAA 57.108 25.926 0.00 0.00 0.00 3.28
378 379 9.892130 TTATTTAAGTTTTTGAGGCTTCCAAAA 57.108 25.926 9.34 9.34 40.47 2.44
379 380 8.978874 ATTTAAGTTTTTGAGGCTTCCAAAAT 57.021 26.923 13.02 0.00 41.39 1.82
380 381 8.800370 TTTAAGTTTTTGAGGCTTCCAAAATT 57.200 26.923 13.02 9.03 41.39 1.82
381 382 6.925610 AAGTTTTTGAGGCTTCCAAAATTC 57.074 33.333 13.02 10.16 41.39 2.17
382 383 5.368145 AGTTTTTGAGGCTTCCAAAATTCC 58.632 37.500 13.02 6.56 41.39 3.01
383 384 5.130975 AGTTTTTGAGGCTTCCAAAATTCCT 59.869 36.000 13.02 8.18 41.39 3.36
384 385 4.871933 TTTGAGGCTTCCAAAATTCCTC 57.128 40.909 0.00 0.00 42.67 3.71
386 387 3.424703 TGAGGCTTCCAAAATTCCTCAG 58.575 45.455 5.85 0.00 45.83 3.35
387 388 3.181429 TGAGGCTTCCAAAATTCCTCAGT 60.181 43.478 5.85 0.00 45.83 3.41
388 389 3.829026 GAGGCTTCCAAAATTCCTCAGTT 59.171 43.478 0.00 0.00 42.10 3.16
389 390 3.829026 AGGCTTCCAAAATTCCTCAGTTC 59.171 43.478 0.00 0.00 0.00 3.01
390 391 3.573967 GGCTTCCAAAATTCCTCAGTTCA 59.426 43.478 0.00 0.00 0.00 3.18
391 392 4.039124 GGCTTCCAAAATTCCTCAGTTCAA 59.961 41.667 0.00 0.00 0.00 2.69
392 393 5.225642 GCTTCCAAAATTCCTCAGTTCAAG 58.774 41.667 0.00 0.00 0.00 3.02
393 394 5.221322 GCTTCCAAAATTCCTCAGTTCAAGT 60.221 40.000 0.00 0.00 0.00 3.16
394 395 6.683861 GCTTCCAAAATTCCTCAGTTCAAGTT 60.684 38.462 0.00 0.00 0.00 2.66
395 396 6.790232 TCCAAAATTCCTCAGTTCAAGTTT 57.210 33.333 0.00 0.00 0.00 2.66
396 397 6.805713 TCCAAAATTCCTCAGTTCAAGTTTC 58.194 36.000 0.00 0.00 0.00 2.78
397 398 5.687285 CCAAAATTCCTCAGTTCAAGTTTCG 59.313 40.000 0.00 0.00 0.00 3.46
398 399 6.459573 CCAAAATTCCTCAGTTCAAGTTTCGA 60.460 38.462 0.00 0.00 0.00 3.71
399 400 6.693315 AAATTCCTCAGTTCAAGTTTCGAA 57.307 33.333 0.00 0.00 0.00 3.71
400 401 6.693315 AATTCCTCAGTTCAAGTTTCGAAA 57.307 33.333 6.47 6.47 0.00 3.46
401 402 6.693315 ATTCCTCAGTTCAAGTTTCGAAAA 57.307 33.333 13.10 0.00 0.00 2.29
402 403 6.693315 TTCCTCAGTTCAAGTTTCGAAAAT 57.307 33.333 13.10 8.92 0.00 1.82
403 404 7.795482 TTCCTCAGTTCAAGTTTCGAAAATA 57.205 32.000 13.10 0.00 0.00 1.40
404 405 7.979444 TCCTCAGTTCAAGTTTCGAAAATAT 57.021 32.000 13.10 0.00 0.00 1.28
405 406 9.496873 TTCCTCAGTTCAAGTTTCGAAAATATA 57.503 29.630 13.10 0.07 0.00 0.86
406 407 9.151471 TCCTCAGTTCAAGTTTCGAAAATATAG 57.849 33.333 13.10 5.66 0.00 1.31
407 408 9.151471 CCTCAGTTCAAGTTTCGAAAATATAGA 57.849 33.333 13.10 7.94 0.00 1.98
408 409 9.959775 CTCAGTTCAAGTTTCGAAAATATAGAC 57.040 33.333 13.10 8.71 0.00 2.59
409 410 9.483916 TCAGTTCAAGTTTCGAAAATATAGACA 57.516 29.630 13.10 0.59 0.00 3.41
415 416 9.162793 CAAGTTTCGAAAATATAGACATGATGC 57.837 33.333 13.10 0.00 0.00 3.91
416 417 8.437360 AGTTTCGAAAATATAGACATGATGCA 57.563 30.769 13.10 0.00 0.00 3.96
417 418 8.338259 AGTTTCGAAAATATAGACATGATGCAC 58.662 33.333 13.10 0.00 0.00 4.57
418 419 7.784633 TTCGAAAATATAGACATGATGCACA 57.215 32.000 0.00 0.00 0.00 4.57
419 420 7.177498 TCGAAAATATAGACATGATGCACAC 57.823 36.000 0.00 0.00 0.00 3.82
420 421 6.760770 TCGAAAATATAGACATGATGCACACA 59.239 34.615 0.00 0.00 0.00 3.72
421 422 7.442062 TCGAAAATATAGACATGATGCACACAT 59.558 33.333 0.00 0.00 39.98 3.21
422 423 7.532884 CGAAAATATAGACATGATGCACACATG 59.467 37.037 24.68 24.68 46.96 3.21
423 424 8.454570 AAAATATAGACATGATGCACACATGA 57.545 30.769 29.78 15.86 45.22 3.07
424 425 8.454570 AAATATAGACATGATGCACACATGAA 57.545 30.769 29.78 19.34 45.22 2.57
425 426 7.668525 ATATAGACATGATGCACACATGAAG 57.331 36.000 29.78 13.29 45.22 3.02
426 427 2.422479 AGACATGATGCACACATGAAGC 59.578 45.455 29.78 21.01 45.22 3.86
427 428 2.422479 GACATGATGCACACATGAAGCT 59.578 45.455 29.78 15.41 45.22 3.74
428 429 3.613030 ACATGATGCACACATGAAGCTA 58.387 40.909 29.78 0.00 45.22 3.32
429 430 3.626217 ACATGATGCACACATGAAGCTAG 59.374 43.478 29.78 11.69 45.22 3.42
430 431 2.011947 TGATGCACACATGAAGCTAGC 58.988 47.619 6.62 6.62 36.35 3.42
431 432 1.332997 GATGCACACATGAAGCTAGCC 59.667 52.381 12.13 0.00 36.35 3.93
432 433 0.325933 TGCACACATGAAGCTAGCCT 59.674 50.000 12.13 0.00 0.00 4.58
433 434 1.554617 TGCACACATGAAGCTAGCCTA 59.445 47.619 12.13 0.00 0.00 3.93
434 435 2.208431 GCACACATGAAGCTAGCCTAG 58.792 52.381 12.13 0.00 0.00 3.02
435 436 2.159043 GCACACATGAAGCTAGCCTAGA 60.159 50.000 12.13 0.00 0.00 2.43
436 437 3.715495 CACACATGAAGCTAGCCTAGAG 58.285 50.000 12.13 1.58 0.00 2.43
437 438 2.102252 ACACATGAAGCTAGCCTAGAGC 59.898 50.000 12.13 0.00 44.25 4.09
447 448 2.202866 GCCTAGAGCACTACCAGCA 58.797 57.895 0.00 0.00 42.97 4.41
448 449 0.103937 GCCTAGAGCACTACCAGCAG 59.896 60.000 0.00 0.00 42.97 4.24
449 450 0.103937 CCTAGAGCACTACCAGCAGC 59.896 60.000 0.00 0.00 0.00 5.25
450 451 1.110442 CTAGAGCACTACCAGCAGCT 58.890 55.000 0.00 0.00 40.60 4.24
451 452 2.302260 CTAGAGCACTACCAGCAGCTA 58.698 52.381 0.00 0.00 37.48 3.32
452 453 1.110442 AGAGCACTACCAGCAGCTAG 58.890 55.000 0.00 0.00 37.48 3.42
453 454 0.103937 GAGCACTACCAGCAGCTAGG 59.896 60.000 0.00 1.57 37.48 3.02
454 455 1.144936 GCACTACCAGCAGCTAGGG 59.855 63.158 13.53 6.55 0.00 3.53
455 456 1.330655 GCACTACCAGCAGCTAGGGA 61.331 60.000 5.78 1.01 0.00 4.20
456 457 1.418334 CACTACCAGCAGCTAGGGAT 58.582 55.000 5.78 0.00 0.00 3.85
457 458 1.069823 CACTACCAGCAGCTAGGGATG 59.930 57.143 5.78 1.08 0.00 3.51
458 459 1.343478 ACTACCAGCAGCTAGGGATGT 60.343 52.381 5.78 1.63 0.00 3.06
459 460 1.069823 CTACCAGCAGCTAGGGATGTG 59.930 57.143 5.78 0.00 0.00 3.21
460 461 0.618680 ACCAGCAGCTAGGGATGTGA 60.619 55.000 5.78 0.00 0.00 3.58
461 462 0.179062 CCAGCAGCTAGGGATGTGAC 60.179 60.000 0.00 0.00 0.00 3.67
462 463 0.538584 CAGCAGCTAGGGATGTGACA 59.461 55.000 0.00 0.00 0.00 3.58
595 599 4.527038 GTCTAGGGTTCCAATCATCCGATA 59.473 45.833 0.00 0.00 0.00 2.92
663 667 3.947196 GACATTATCCTGTCATGTTGCCA 59.053 43.478 0.00 0.00 44.03 4.92
772 779 9.135843 TGAATAAGTACTTTACATCGTTGACAG 57.864 33.333 14.49 0.00 0.00 3.51
790 797 6.335471 TGACAGTGCAATTCTTTCATTGAT 57.665 33.333 0.00 0.00 36.39 2.57
791 798 6.751157 TGACAGTGCAATTCTTTCATTGATT 58.249 32.000 0.00 0.00 36.39 2.57
966 973 7.664082 TCTTCATGATTTTGTCTCTGAGTTC 57.336 36.000 4.32 0.61 0.00 3.01
1075 1082 5.426689 TGTCTTTGTTGCCTATCAGATCT 57.573 39.130 0.00 0.00 0.00 2.75
1103 1110 3.708631 AGAGTGCATGTGACTATAGCCTT 59.291 43.478 0.00 0.00 0.00 4.35
1173 1180 5.431765 AGGTCAACTATGTTGCAAGATAGG 58.568 41.667 34.23 23.04 36.78 2.57
1222 1229 7.663081 GCATTGAGAAGGATATCTTGGACAATA 59.337 37.037 2.05 0.00 35.50 1.90
1244 1251 8.582437 CAATATTGATCTTGATTGTGCCCTTAT 58.418 33.333 10.04 0.00 0.00 1.73
1268 1275 2.948979 ACTTTGCATCAAGAAACGTCCA 59.051 40.909 5.15 0.00 0.00 4.02
1295 1303 6.375455 AGAAACTTTTTCTGAAGCACTGAAGA 59.625 34.615 0.32 0.00 37.64 2.87
1379 1387 9.474920 TGTTAGTTTCATTTTGCTATCCTTTTG 57.525 29.630 0.00 0.00 0.00 2.44
1401 1409 3.673809 GGTATTATTGTCGTCGATGGAGC 59.326 47.826 4.48 0.00 0.00 4.70
1451 1459 8.196802 TGTCGATGGAGTCAGTTAAATTATTG 57.803 34.615 0.00 0.00 0.00 1.90
1564 1572 4.120589 CGGCCCTGAGAAGATTAAAGTAC 58.879 47.826 0.00 0.00 0.00 2.73
1611 1619 6.816640 CAGAAAGATTTAATACGGTCAGGACA 59.183 38.462 1.41 0.00 0.00 4.02
1771 1790 5.008217 TCGGATGTTCAAACAAAGTACAAGG 59.992 40.000 0.00 0.00 43.03 3.61
1795 1815 7.382488 AGGAATGTACGAAGATGACATAAATCG 59.618 37.037 12.73 12.73 33.48 3.34
1864 1900 4.139786 AGCAACATGGGTAATCTATGCTG 58.860 43.478 0.00 0.00 41.01 4.41
2088 2138 7.865889 TGCTAATCAGTTAGTATCATGTTACCG 59.134 37.037 9.80 0.00 39.60 4.02
2089 2139 7.328737 GCTAATCAGTTAGTATCATGTTACCGG 59.671 40.741 0.00 0.00 39.60 5.28
2103 2390 3.579586 TGTTACCGGCCCTACTATATTGG 59.420 47.826 0.00 0.00 0.00 3.16
2152 2441 6.815641 CCTATGAAAGATCATAAGGACGATGG 59.184 42.308 0.00 0.00 45.51 3.51
2238 2535 2.213499 GAATGCCCGACTCCATGTTAG 58.787 52.381 0.00 0.00 0.00 2.34
2248 2545 2.086869 CTCCATGTTAGTTGTGCCCAG 58.913 52.381 0.00 0.00 0.00 4.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 9.606631 ACAGTGGCAAAAGAATTAAATAAAACA 57.393 25.926 0.00 0.00 0.00 2.83
32 33 9.823647 TCAAAACAGTGGCAAAAGAATTAAATA 57.176 25.926 0.00 0.00 0.00 1.40
33 34 8.729805 TCAAAACAGTGGCAAAAGAATTAAAT 57.270 26.923 0.00 0.00 0.00 1.40
34 35 8.553459 TTCAAAACAGTGGCAAAAGAATTAAA 57.447 26.923 0.00 0.00 0.00 1.52
35 36 8.729805 ATTCAAAACAGTGGCAAAAGAATTAA 57.270 26.923 0.00 0.00 0.00 1.40
36 37 8.729805 AATTCAAAACAGTGGCAAAAGAATTA 57.270 26.923 0.00 0.00 33.07 1.40
37 38 7.628769 AATTCAAAACAGTGGCAAAAGAATT 57.371 28.000 0.00 0.00 0.00 2.17
38 39 8.729805 TTAATTCAAAACAGTGGCAAAAGAAT 57.270 26.923 0.00 0.00 0.00 2.40
39 40 8.553459 TTTAATTCAAAACAGTGGCAAAAGAA 57.447 26.923 0.00 0.00 0.00 2.52
40 41 8.553459 TTTTAATTCAAAACAGTGGCAAAAGA 57.447 26.923 0.00 0.00 31.05 2.52
41 42 9.786105 ATTTTTAATTCAAAACAGTGGCAAAAG 57.214 25.926 0.00 0.00 35.84 2.27
65 66 9.452287 AGCTTTGGCATTGTTTGAATTATTATT 57.548 25.926 0.00 0.00 41.70 1.40
66 67 9.101655 GAGCTTTGGCATTGTTTGAATTATTAT 57.898 29.630 0.00 0.00 41.70 1.28
67 68 7.548780 GGAGCTTTGGCATTGTTTGAATTATTA 59.451 33.333 0.00 0.00 41.70 0.98
68 69 6.372381 GGAGCTTTGGCATTGTTTGAATTATT 59.628 34.615 0.00 0.00 41.70 1.40
69 70 5.876460 GGAGCTTTGGCATTGTTTGAATTAT 59.124 36.000 0.00 0.00 41.70 1.28
70 71 5.011943 AGGAGCTTTGGCATTGTTTGAATTA 59.988 36.000 0.00 0.00 41.70 1.40
71 72 4.067192 GGAGCTTTGGCATTGTTTGAATT 58.933 39.130 0.00 0.00 41.70 2.17
72 73 3.325716 AGGAGCTTTGGCATTGTTTGAAT 59.674 39.130 0.00 0.00 41.70 2.57
73 74 2.699846 AGGAGCTTTGGCATTGTTTGAA 59.300 40.909 0.00 0.00 41.70 2.69
74 75 2.297033 GAGGAGCTTTGGCATTGTTTGA 59.703 45.455 0.00 0.00 41.70 2.69
75 76 2.298163 AGAGGAGCTTTGGCATTGTTTG 59.702 45.455 0.00 0.00 41.70 2.93
76 77 2.298163 CAGAGGAGCTTTGGCATTGTTT 59.702 45.455 0.00 0.00 41.70 2.83
77 78 1.891150 CAGAGGAGCTTTGGCATTGTT 59.109 47.619 0.00 0.00 41.70 2.83
78 79 1.074405 TCAGAGGAGCTTTGGCATTGT 59.926 47.619 0.00 0.00 41.70 2.71
79 80 1.830279 TCAGAGGAGCTTTGGCATTG 58.170 50.000 0.00 0.00 41.70 2.82
80 81 2.592102 TTCAGAGGAGCTTTGGCATT 57.408 45.000 0.00 0.00 41.70 3.56
81 82 2.822707 ATTCAGAGGAGCTTTGGCAT 57.177 45.000 0.00 0.00 41.70 4.40
82 83 3.939740 ATATTCAGAGGAGCTTTGGCA 57.060 42.857 0.00 0.00 41.70 4.92
83 84 5.588958 AAAATATTCAGAGGAGCTTTGGC 57.411 39.130 0.00 0.00 39.06 4.52
87 88 9.804977 AGCAATATAAAATATTCAGAGGAGCTT 57.195 29.630 0.00 0.00 0.00 3.74
126 127 9.546428 CCCCAGAAATATTTTATAAGCTTTTGG 57.454 33.333 3.20 0.00 0.00 3.28
199 200 9.131791 GGGACTTTGGATTTAATTCATTAGCTA 57.868 33.333 0.00 0.00 0.00 3.32
200 201 7.619302 TGGGACTTTGGATTTAATTCATTAGCT 59.381 33.333 0.00 0.00 0.00 3.32
201 202 7.781056 TGGGACTTTGGATTTAATTCATTAGC 58.219 34.615 0.20 0.00 0.00 3.09
204 205 9.859152 TTTTTGGGACTTTGGATTTAATTCATT 57.141 25.926 0.20 0.00 0.00 2.57
211 212 9.952030 GGAATTATTTTTGGGACTTTGGATTTA 57.048 29.630 0.00 0.00 0.00 1.40
212 213 8.668653 AGGAATTATTTTTGGGACTTTGGATTT 58.331 29.630 0.00 0.00 0.00 2.17
213 214 8.218423 AGGAATTATTTTTGGGACTTTGGATT 57.782 30.769 0.00 0.00 0.00 3.01
214 215 7.813087 AGGAATTATTTTTGGGACTTTGGAT 57.187 32.000 0.00 0.00 0.00 3.41
215 216 7.625498 AAGGAATTATTTTTGGGACTTTGGA 57.375 32.000 0.00 0.00 0.00 3.53
216 217 9.785982 TTTAAGGAATTATTTTTGGGACTTTGG 57.214 29.630 0.00 0.00 0.00 3.28
240 241 8.845227 GTCCCAACCAAAATATTGAACATTTTT 58.155 29.630 0.00 0.00 38.94 1.94
241 242 7.446931 GGTCCCAACCAAAATATTGAACATTTT 59.553 33.333 0.00 0.00 45.68 1.82
242 243 6.939730 GGTCCCAACCAAAATATTGAACATTT 59.060 34.615 0.00 0.00 45.68 2.32
243 244 6.472016 GGTCCCAACCAAAATATTGAACATT 58.528 36.000 0.00 0.00 45.68 2.71
244 245 6.048732 GGTCCCAACCAAAATATTGAACAT 57.951 37.500 0.00 0.00 45.68 2.71
245 246 5.476091 GGTCCCAACCAAAATATTGAACA 57.524 39.130 0.00 0.00 45.68 3.18
258 259 1.069775 TAAGGGTTCTGGTCCCAACC 58.930 55.000 10.32 10.32 46.82 3.77
259 260 1.271762 GGTAAGGGTTCTGGTCCCAAC 60.272 57.143 3.79 1.66 46.82 3.77
260 261 1.069775 GGTAAGGGTTCTGGTCCCAA 58.930 55.000 3.79 0.00 46.82 4.12
261 262 0.104356 TGGTAAGGGTTCTGGTCCCA 60.104 55.000 3.79 0.00 46.82 4.37
262 263 1.069775 TTGGTAAGGGTTCTGGTCCC 58.930 55.000 0.00 0.00 44.90 4.46
263 264 2.963599 TTTGGTAAGGGTTCTGGTCC 57.036 50.000 0.00 0.00 0.00 4.46
264 265 4.830600 TGATTTTTGGTAAGGGTTCTGGTC 59.169 41.667 0.00 0.00 0.00 4.02
265 266 4.810345 TGATTTTTGGTAAGGGTTCTGGT 58.190 39.130 0.00 0.00 0.00 4.00
266 267 5.480073 TGATGATTTTTGGTAAGGGTTCTGG 59.520 40.000 0.00 0.00 0.00 3.86
267 268 6.588719 TGATGATTTTTGGTAAGGGTTCTG 57.411 37.500 0.00 0.00 0.00 3.02
268 269 7.070571 TGTTTGATGATTTTTGGTAAGGGTTCT 59.929 33.333 0.00 0.00 0.00 3.01
269 270 7.213678 TGTTTGATGATTTTTGGTAAGGGTTC 58.786 34.615 0.00 0.00 0.00 3.62
270 271 7.130681 TGTTTGATGATTTTTGGTAAGGGTT 57.869 32.000 0.00 0.00 0.00 4.11
271 272 6.739331 TGTTTGATGATTTTTGGTAAGGGT 57.261 33.333 0.00 0.00 0.00 4.34
272 273 8.620116 AAATGTTTGATGATTTTTGGTAAGGG 57.380 30.769 0.00 0.00 0.00 3.95
280 281 9.964303 GCCCTTTTTAAATGTTTGATGATTTTT 57.036 25.926 0.00 0.00 0.00 1.94
281 282 9.129532 TGCCCTTTTTAAATGTTTGATGATTTT 57.870 25.926 0.00 0.00 0.00 1.82
282 283 8.688747 TGCCCTTTTTAAATGTTTGATGATTT 57.311 26.923 0.00 0.00 0.00 2.17
283 284 8.866970 ATGCCCTTTTTAAATGTTTGATGATT 57.133 26.923 0.00 0.00 0.00 2.57
284 285 8.866970 AATGCCCTTTTTAAATGTTTGATGAT 57.133 26.923 0.00 0.00 0.00 2.45
285 286 8.688747 AAATGCCCTTTTTAAATGTTTGATGA 57.311 26.923 0.00 0.00 0.00 2.92
286 287 9.747293 AAAAATGCCCTTTTTAAATGTTTGATG 57.253 25.926 5.34 0.00 43.56 3.07
287 288 9.747293 CAAAAATGCCCTTTTTAAATGTTTGAT 57.253 25.926 6.53 0.00 43.54 2.57
288 289 8.193438 CCAAAAATGCCCTTTTTAAATGTTTGA 58.807 29.630 6.53 0.00 43.54 2.69
289 290 8.193438 TCCAAAAATGCCCTTTTTAAATGTTTG 58.807 29.630 6.53 0.00 43.54 2.93
290 291 8.298729 TCCAAAAATGCCCTTTTTAAATGTTT 57.701 26.923 6.53 0.00 43.54 2.83
291 292 7.469870 GCTCCAAAAATGCCCTTTTTAAATGTT 60.470 33.333 6.53 0.00 43.54 2.71
292 293 6.016360 GCTCCAAAAATGCCCTTTTTAAATGT 60.016 34.615 6.53 0.00 43.54 2.71
293 294 6.016443 TGCTCCAAAAATGCCCTTTTTAAATG 60.016 34.615 6.53 0.00 43.54 2.32
294 295 6.067350 TGCTCCAAAAATGCCCTTTTTAAAT 58.933 32.000 6.53 0.00 43.54 1.40
295 296 5.440610 TGCTCCAAAAATGCCCTTTTTAAA 58.559 33.333 6.53 0.00 43.54 1.52
296 297 5.041191 TGCTCCAAAAATGCCCTTTTTAA 57.959 34.783 6.53 0.11 43.54 1.52
297 298 4.696479 TGCTCCAAAAATGCCCTTTTTA 57.304 36.364 6.53 0.00 43.54 1.52
298 299 3.574354 TGCTCCAAAAATGCCCTTTTT 57.426 38.095 2.03 2.03 45.70 1.94
299 300 3.574354 TTGCTCCAAAAATGCCCTTTT 57.426 38.095 0.00 0.00 38.73 2.27
300 301 3.072768 TCATTGCTCCAAAAATGCCCTTT 59.927 39.130 0.00 0.00 34.44 3.11
301 302 2.638855 TCATTGCTCCAAAAATGCCCTT 59.361 40.909 0.00 0.00 34.44 3.95
302 303 2.259012 TCATTGCTCCAAAAATGCCCT 58.741 42.857 0.00 0.00 34.44 5.19
303 304 2.766345 TCATTGCTCCAAAAATGCCC 57.234 45.000 0.00 0.00 34.44 5.36
304 305 4.255301 TCATTCATTGCTCCAAAAATGCC 58.745 39.130 9.64 0.00 34.03 4.40
305 306 5.063060 GTCTCATTCATTGCTCCAAAAATGC 59.937 40.000 9.64 0.00 34.03 3.56
306 307 6.395629 AGTCTCATTCATTGCTCCAAAAATG 58.604 36.000 8.77 8.77 34.66 2.32
307 308 6.600882 AGTCTCATTCATTGCTCCAAAAAT 57.399 33.333 0.00 0.00 0.00 1.82
308 309 6.409524 AAGTCTCATTCATTGCTCCAAAAA 57.590 33.333 0.00 0.00 0.00 1.94
309 310 5.047802 GGAAGTCTCATTCATTGCTCCAAAA 60.048 40.000 0.00 0.00 0.00 2.44
310 311 4.460382 GGAAGTCTCATTCATTGCTCCAAA 59.540 41.667 0.00 0.00 0.00 3.28
311 312 4.012374 GGAAGTCTCATTCATTGCTCCAA 58.988 43.478 0.00 0.00 0.00 3.53
312 313 3.009363 TGGAAGTCTCATTCATTGCTCCA 59.991 43.478 0.00 0.00 0.00 3.86
313 314 3.614092 TGGAAGTCTCATTCATTGCTCC 58.386 45.455 0.00 0.00 0.00 4.70
314 315 3.626670 CCTGGAAGTCTCATTCATTGCTC 59.373 47.826 0.00 0.00 0.00 4.26
315 316 3.618351 CCTGGAAGTCTCATTCATTGCT 58.382 45.455 0.00 0.00 0.00 3.91
316 317 2.686915 CCCTGGAAGTCTCATTCATTGC 59.313 50.000 0.00 0.00 0.00 3.56
317 318 3.960571 ACCCTGGAAGTCTCATTCATTG 58.039 45.455 0.00 0.00 0.00 2.82
318 319 4.664688 AACCCTGGAAGTCTCATTCATT 57.335 40.909 0.00 0.00 0.00 2.57
319 320 4.664688 AAACCCTGGAAGTCTCATTCAT 57.335 40.909 0.00 0.00 0.00 2.57
320 321 4.453480 AAAACCCTGGAAGTCTCATTCA 57.547 40.909 0.00 0.00 0.00 2.57
321 322 4.559502 GCAAAAACCCTGGAAGTCTCATTC 60.560 45.833 0.00 0.00 0.00 2.67
322 323 3.321968 GCAAAAACCCTGGAAGTCTCATT 59.678 43.478 0.00 0.00 0.00 2.57
323 324 2.893489 GCAAAAACCCTGGAAGTCTCAT 59.107 45.455 0.00 0.00 0.00 2.90
324 325 2.306847 GCAAAAACCCTGGAAGTCTCA 58.693 47.619 0.00 0.00 0.00 3.27
325 326 1.613925 GGCAAAAACCCTGGAAGTCTC 59.386 52.381 0.00 0.00 0.00 3.36
326 327 1.704641 GGCAAAAACCCTGGAAGTCT 58.295 50.000 0.00 0.00 0.00 3.24
336 337 7.221450 ACTTAAATAAAAGAGGGGCAAAAACC 58.779 34.615 0.00 0.00 0.00 3.27
337 338 8.671384 AACTTAAATAAAAGAGGGGCAAAAAC 57.329 30.769 0.00 0.00 0.00 2.43
338 339 9.688091 AAAACTTAAATAAAAGAGGGGCAAAAA 57.312 25.926 0.00 0.00 0.00 1.94
339 340 9.688091 AAAAACTTAAATAAAAGAGGGGCAAAA 57.312 25.926 0.00 0.00 0.00 2.44
340 341 9.114952 CAAAAACTTAAATAAAAGAGGGGCAAA 57.885 29.630 0.00 0.00 0.00 3.68
341 342 8.487028 TCAAAAACTTAAATAAAAGAGGGGCAA 58.513 29.630 0.00 0.00 0.00 4.52
342 343 8.024145 TCAAAAACTTAAATAAAAGAGGGGCA 57.976 30.769 0.00 0.00 0.00 5.36
343 344 7.602644 CCTCAAAAACTTAAATAAAAGAGGGGC 59.397 37.037 0.00 0.00 36.24 5.80
344 345 7.602644 GCCTCAAAAACTTAAATAAAAGAGGGG 59.397 37.037 0.00 0.00 39.36 4.79
345 346 8.367911 AGCCTCAAAAACTTAAATAAAAGAGGG 58.632 33.333 0.00 0.00 39.36 4.30
346 347 9.764363 AAGCCTCAAAAACTTAAATAAAAGAGG 57.236 29.630 0.00 0.00 41.32 3.69
348 349 9.758651 GGAAGCCTCAAAAACTTAAATAAAAGA 57.241 29.630 0.00 0.00 0.00 2.52
349 350 9.541143 TGGAAGCCTCAAAAACTTAAATAAAAG 57.459 29.630 0.00 0.00 0.00 2.27
350 351 9.892130 TTGGAAGCCTCAAAAACTTAAATAAAA 57.108 25.926 0.00 0.00 0.00 1.52
351 352 9.892130 TTTGGAAGCCTCAAAAACTTAAATAAA 57.108 25.926 0.00 0.00 32.01 1.40
352 353 9.892130 TTTTGGAAGCCTCAAAAACTTAAATAA 57.108 25.926 0.00 0.00 39.99 1.40
354 355 8.978874 ATTTTGGAAGCCTCAAAAACTTAAAT 57.021 26.923 0.00 0.00 44.10 1.40
355 356 8.800370 AATTTTGGAAGCCTCAAAAACTTAAA 57.200 26.923 0.00 0.00 44.10 1.52
356 357 7.497579 GGAATTTTGGAAGCCTCAAAAACTTAA 59.502 33.333 0.00 0.00 44.10 1.85
357 358 6.989759 GGAATTTTGGAAGCCTCAAAAACTTA 59.010 34.615 0.00 0.00 44.10 2.24
358 359 5.822519 GGAATTTTGGAAGCCTCAAAAACTT 59.177 36.000 0.00 0.00 44.10 2.66
359 360 5.130975 AGGAATTTTGGAAGCCTCAAAAACT 59.869 36.000 0.00 0.00 44.10 2.66
360 361 5.368145 AGGAATTTTGGAAGCCTCAAAAAC 58.632 37.500 0.00 4.92 44.10 2.43
361 362 5.610398 GAGGAATTTTGGAAGCCTCAAAAA 58.390 37.500 0.06 0.06 44.10 1.94
362 363 5.213891 GAGGAATTTTGGAAGCCTCAAAA 57.786 39.130 0.00 10.46 44.71 2.44
363 364 4.871933 GAGGAATTTTGGAAGCCTCAAA 57.128 40.909 0.00 0.00 43.55 2.69
366 367 3.425659 ACTGAGGAATTTTGGAAGCCTC 58.574 45.455 0.00 0.00 44.18 4.70
367 368 3.532641 ACTGAGGAATTTTGGAAGCCT 57.467 42.857 0.00 0.00 0.00 4.58
368 369 3.573967 TGAACTGAGGAATTTTGGAAGCC 59.426 43.478 0.00 0.00 0.00 4.35
369 370 4.853924 TGAACTGAGGAATTTTGGAAGC 57.146 40.909 0.00 0.00 0.00 3.86
370 371 6.396829 ACTTGAACTGAGGAATTTTGGAAG 57.603 37.500 0.00 0.00 0.00 3.46
371 372 6.790232 AACTTGAACTGAGGAATTTTGGAA 57.210 33.333 0.00 0.00 0.00 3.53
372 373 6.459573 CGAAACTTGAACTGAGGAATTTTGGA 60.460 38.462 0.00 0.00 0.00 3.53
373 374 5.687285 CGAAACTTGAACTGAGGAATTTTGG 59.313 40.000 0.00 0.00 0.00 3.28
374 375 6.494842 TCGAAACTTGAACTGAGGAATTTTG 58.505 36.000 0.00 0.00 0.00 2.44
375 376 6.693315 TCGAAACTTGAACTGAGGAATTTT 57.307 33.333 0.00 0.00 0.00 1.82
376 377 6.693315 TTCGAAACTTGAACTGAGGAATTT 57.307 33.333 0.00 0.00 0.00 1.82
377 378 6.693315 TTTCGAAACTTGAACTGAGGAATT 57.307 33.333 6.47 0.00 0.00 2.17
378 379 6.693315 TTTTCGAAACTTGAACTGAGGAAT 57.307 33.333 10.79 0.00 0.00 3.01
379 380 6.693315 ATTTTCGAAACTTGAACTGAGGAA 57.307 33.333 10.79 0.00 0.00 3.36
380 381 7.979444 ATATTTTCGAAACTTGAACTGAGGA 57.021 32.000 10.79 0.00 0.00 3.71
381 382 9.151471 TCTATATTTTCGAAACTTGAACTGAGG 57.849 33.333 10.79 0.00 0.00 3.86
382 383 9.959775 GTCTATATTTTCGAAACTTGAACTGAG 57.040 33.333 10.79 0.00 0.00 3.35
383 384 9.483916 TGTCTATATTTTCGAAACTTGAACTGA 57.516 29.630 10.79 0.00 0.00 3.41
389 390 9.162793 GCATCATGTCTATATTTTCGAAACTTG 57.837 33.333 10.79 6.75 0.00 3.16
390 391 8.892723 TGCATCATGTCTATATTTTCGAAACTT 58.107 29.630 10.79 3.91 0.00 2.66
391 392 8.338259 GTGCATCATGTCTATATTTTCGAAACT 58.662 33.333 10.79 8.13 0.00 2.66
392 393 8.122330 TGTGCATCATGTCTATATTTTCGAAAC 58.878 33.333 10.79 0.00 0.00 2.78
393 394 8.122330 GTGTGCATCATGTCTATATTTTCGAAA 58.878 33.333 6.47 6.47 0.00 3.46
394 395 7.279758 TGTGTGCATCATGTCTATATTTTCGAA 59.720 33.333 0.00 0.00 0.00 3.71
395 396 6.760770 TGTGTGCATCATGTCTATATTTTCGA 59.239 34.615 0.00 0.00 0.00 3.71
396 397 6.947258 TGTGTGCATCATGTCTATATTTTCG 58.053 36.000 0.00 0.00 0.00 3.46
397 398 8.562052 TCATGTGTGCATCATGTCTATATTTTC 58.438 33.333 23.97 0.00 42.03 2.29
398 399 8.454570 TCATGTGTGCATCATGTCTATATTTT 57.545 30.769 23.97 0.00 42.03 1.82
399 400 8.454570 TTCATGTGTGCATCATGTCTATATTT 57.545 30.769 23.97 0.00 42.03 1.40
400 401 7.308408 GCTTCATGTGTGCATCATGTCTATATT 60.308 37.037 23.97 0.00 42.03 1.28
401 402 6.148976 GCTTCATGTGTGCATCATGTCTATAT 59.851 38.462 23.97 0.00 42.03 0.86
402 403 5.467735 GCTTCATGTGTGCATCATGTCTATA 59.532 40.000 23.97 10.12 42.03 1.31
403 404 4.275196 GCTTCATGTGTGCATCATGTCTAT 59.725 41.667 23.97 0.00 42.03 1.98
404 405 3.624410 GCTTCATGTGTGCATCATGTCTA 59.376 43.478 23.97 14.81 42.03 2.59
405 406 2.422479 GCTTCATGTGTGCATCATGTCT 59.578 45.455 23.97 0.00 42.03 3.41
406 407 2.422479 AGCTTCATGTGTGCATCATGTC 59.578 45.455 23.97 17.33 42.03 3.06
407 408 2.443416 AGCTTCATGTGTGCATCATGT 58.557 42.857 23.97 10.38 42.03 3.21
408 409 3.548214 GCTAGCTTCATGTGTGCATCATG 60.548 47.826 21.12 21.12 42.53 3.07
409 410 2.617308 GCTAGCTTCATGTGTGCATCAT 59.383 45.455 7.70 0.00 31.99 2.45
410 411 2.011947 GCTAGCTTCATGTGTGCATCA 58.988 47.619 7.70 0.00 31.99 3.07
411 412 1.332997 GGCTAGCTTCATGTGTGCATC 59.667 52.381 15.72 0.00 31.99 3.91
412 413 1.064906 AGGCTAGCTTCATGTGTGCAT 60.065 47.619 15.72 0.00 35.32 3.96
413 414 0.325933 AGGCTAGCTTCATGTGTGCA 59.674 50.000 15.72 0.00 0.00 4.57
414 415 2.159043 TCTAGGCTAGCTTCATGTGTGC 60.159 50.000 16.85 0.00 0.00 4.57
415 416 3.715495 CTCTAGGCTAGCTTCATGTGTG 58.285 50.000 16.85 0.00 0.00 3.82
416 417 2.102252 GCTCTAGGCTAGCTTCATGTGT 59.898 50.000 16.85 0.00 37.01 3.72
417 418 2.102084 TGCTCTAGGCTAGCTTCATGTG 59.898 50.000 16.85 3.77 40.73 3.21
418 419 2.102252 GTGCTCTAGGCTAGCTTCATGT 59.898 50.000 16.85 0.00 40.73 3.21
419 420 2.364970 AGTGCTCTAGGCTAGCTTCATG 59.635 50.000 16.85 4.09 40.73 3.07
420 421 2.676748 AGTGCTCTAGGCTAGCTTCAT 58.323 47.619 16.85 1.13 40.73 2.57
421 422 2.151502 AGTGCTCTAGGCTAGCTTCA 57.848 50.000 16.85 10.69 40.73 3.02
422 423 2.295070 GGTAGTGCTCTAGGCTAGCTTC 59.705 54.545 16.85 8.34 40.73 3.86
423 424 2.312390 GGTAGTGCTCTAGGCTAGCTT 58.688 52.381 16.85 10.11 40.73 3.74
424 425 1.215673 TGGTAGTGCTCTAGGCTAGCT 59.784 52.381 16.85 10.22 40.73 3.32
425 426 1.611491 CTGGTAGTGCTCTAGGCTAGC 59.389 57.143 16.85 6.04 42.39 3.42
426 427 1.611491 GCTGGTAGTGCTCTAGGCTAG 59.389 57.143 15.56 15.56 42.39 3.42
427 428 1.063942 TGCTGGTAGTGCTCTAGGCTA 60.064 52.381 12.97 0.00 42.39 3.93
428 429 0.324738 TGCTGGTAGTGCTCTAGGCT 60.325 55.000 12.97 0.00 42.39 4.58
429 430 0.103937 CTGCTGGTAGTGCTCTAGGC 59.896 60.000 0.00 2.69 42.22 3.93
430 431 0.103937 GCTGCTGGTAGTGCTCTAGG 59.896 60.000 0.00 0.00 0.00 3.02
431 432 1.110442 AGCTGCTGGTAGTGCTCTAG 58.890 55.000 0.00 0.00 0.00 2.43
432 433 2.302260 CTAGCTGCTGGTAGTGCTCTA 58.698 52.381 18.58 0.00 38.91 2.43
433 434 1.110442 CTAGCTGCTGGTAGTGCTCT 58.890 55.000 18.58 0.00 38.91 4.09
434 435 0.103937 CCTAGCTGCTGGTAGTGCTC 59.896 60.000 23.07 0.00 41.31 4.26
435 436 1.333636 CCCTAGCTGCTGGTAGTGCT 61.334 60.000 23.07 7.44 41.31 4.40
436 437 1.144936 CCCTAGCTGCTGGTAGTGC 59.855 63.158 23.07 0.95 41.31 4.40
437 438 1.069823 CATCCCTAGCTGCTGGTAGTG 59.930 57.143 23.07 15.22 41.31 2.74
438 439 1.343478 ACATCCCTAGCTGCTGGTAGT 60.343 52.381 23.07 6.38 41.31 2.73
439 440 1.069823 CACATCCCTAGCTGCTGGTAG 59.930 57.143 19.56 19.56 42.22 3.18
440 441 1.123077 CACATCCCTAGCTGCTGGTA 58.877 55.000 13.43 0.00 0.00 3.25
441 442 0.618680 TCACATCCCTAGCTGCTGGT 60.619 55.000 13.43 0.00 0.00 4.00
442 443 0.179062 GTCACATCCCTAGCTGCTGG 60.179 60.000 13.43 9.59 0.00 4.85
443 444 0.538584 TGTCACATCCCTAGCTGCTG 59.461 55.000 13.43 2.21 0.00 4.41
444 445 0.539051 GTGTCACATCCCTAGCTGCT 59.461 55.000 7.57 7.57 0.00 4.24
445 446 0.462759 GGTGTCACATCCCTAGCTGC 60.463 60.000 5.12 0.00 0.00 5.25
446 447 0.904649 TGGTGTCACATCCCTAGCTG 59.095 55.000 5.12 0.00 0.00 4.24
447 448 1.487976 CATGGTGTCACATCCCTAGCT 59.512 52.381 5.12 0.00 0.00 3.32
448 449 1.210478 ACATGGTGTCACATCCCTAGC 59.790 52.381 5.12 0.00 0.00 3.42
449 450 3.535561 GAACATGGTGTCACATCCCTAG 58.464 50.000 5.12 0.00 0.00 3.02
450 451 2.238646 GGAACATGGTGTCACATCCCTA 59.761 50.000 5.12 0.00 0.00 3.53
451 452 1.004745 GGAACATGGTGTCACATCCCT 59.995 52.381 5.12 0.00 0.00 4.20
452 453 1.004745 AGGAACATGGTGTCACATCCC 59.995 52.381 5.12 0.00 0.00 3.85
453 454 2.086869 CAGGAACATGGTGTCACATCC 58.913 52.381 5.12 4.40 0.00 3.51
454 455 3.057969 TCAGGAACATGGTGTCACATC 57.942 47.619 5.12 0.00 0.00 3.06
455 456 3.009363 TCATCAGGAACATGGTGTCACAT 59.991 43.478 5.12 0.00 32.88 3.21
456 457 2.371510 TCATCAGGAACATGGTGTCACA 59.628 45.455 5.12 0.00 32.88 3.58
457 458 2.744202 GTCATCAGGAACATGGTGTCAC 59.256 50.000 0.00 0.00 32.88 3.67
458 459 2.290260 GGTCATCAGGAACATGGTGTCA 60.290 50.000 0.00 0.00 32.88 3.58
459 460 2.026822 AGGTCATCAGGAACATGGTGTC 60.027 50.000 0.00 0.00 34.85 3.67
460 461 1.988107 AGGTCATCAGGAACATGGTGT 59.012 47.619 0.00 0.00 34.85 4.16
461 462 2.026915 TCAGGTCATCAGGAACATGGTG 60.027 50.000 0.00 0.00 34.85 4.17
462 463 2.269023 TCAGGTCATCAGGAACATGGT 58.731 47.619 0.00 0.00 34.85 3.55
540 544 8.520351 TGGATGGATAGTTGAATACGTACATAG 58.480 37.037 0.00 0.00 0.00 2.23
663 667 4.696455 CACCCAACAATTGCTTCTTCTTT 58.304 39.130 5.05 0.00 0.00 2.52
772 779 6.021153 GCGACTAATCAATGAAAGAATTGCAC 60.021 38.462 3.42 0.00 37.44 4.57
790 797 5.538118 TCTTCAACTGATCAAAGCGACTAA 58.462 37.500 0.00 0.00 0.00 2.24
791 798 5.134202 TCTTCAACTGATCAAAGCGACTA 57.866 39.130 0.00 0.00 0.00 2.59
856 863 2.766263 TGCTATCATCCAAGGACTTCGT 59.234 45.455 0.00 0.00 0.00 3.85
857 864 3.181471 ACTGCTATCATCCAAGGACTTCG 60.181 47.826 0.00 0.00 0.00 3.79
934 941 8.459635 AGAGACAAAATCATGAAGATCAACATG 58.540 33.333 19.30 19.30 43.31 3.21
1075 1082 6.980978 GCTATAGTCACATGCACTCTTAAGAA 59.019 38.462 6.63 0.00 0.00 2.52
1173 1180 3.447742 GCACATAGCCAAGCCATTTAAC 58.552 45.455 0.00 0.00 37.23 2.01
1222 1229 6.608405 TCAATAAGGGCACAATCAAGATCAAT 59.392 34.615 0.00 0.00 0.00 2.57
1244 1251 4.497340 GGACGTTTCTTGATGCAAAGTCAA 60.497 41.667 0.00 0.00 34.63 3.18
1268 1275 6.924111 TCAGTGCTTCAGAAAAAGTTTCTTT 58.076 32.000 0.47 0.00 0.00 2.52
1295 1303 7.382488 CGACTGACTCCATCGACAATAATAATT 59.618 37.037 0.00 0.00 38.10 1.40
1379 1387 3.673809 GCTCCATCGACGACAATAATACC 59.326 47.826 0.00 0.00 0.00 2.73
1390 1398 2.582498 GAACCGGCTCCATCGACG 60.582 66.667 0.00 0.00 0.00 5.12
1564 1572 7.463544 TCTGTATAACTGAACAATGCATTTCG 58.536 34.615 9.83 1.80 0.00 3.46
1603 1611 3.510388 TCTCATGATCGTTGTCCTGAC 57.490 47.619 0.00 0.00 0.00 3.51
1611 1619 4.999950 AGAAGCAAAGTTCTCATGATCGTT 59.000 37.500 0.00 0.00 30.55 3.85
1771 1790 8.062231 ACGATTTATGTCATCTTCGTACATTC 57.938 34.615 13.05 0.00 37.98 2.67
1795 1815 2.029110 TGGCTCCATAAAGCAGCAAAAC 60.029 45.455 0.00 0.00 44.35 2.43
1911 1947 3.003480 GGAGATGAGTGGCAACTACAAC 58.997 50.000 0.00 0.00 36.52 3.32
2039 2084 6.513180 CAAAGGATCCATACTATGTACGTGT 58.487 40.000 15.82 0.00 0.00 4.49
2043 2090 9.372369 GATTAGCAAAGGATCCATACTATGTAC 57.628 37.037 15.82 0.00 0.00 2.90
2103 2390 6.996879 GGTATACCAAAGGAAGTTTATCCCTC 59.003 42.308 17.44 0.00 36.69 4.30
2152 2441 5.011329 TGTGTAACTTCCCATATATCCCGAC 59.989 44.000 0.00 0.00 38.04 4.79
2238 2535 2.287644 GCAAATGAAAACTGGGCACAAC 59.712 45.455 0.00 0.00 0.00 3.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.