Multiple sequence alignment - TraesCS3A01G526200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G526200 chr3A 100.000 2063 0 0 1 2063 739992571 739990509 0.000000e+00 3810
1 TraesCS3A01G526200 chr3A 100.000 1500 0 0 2369 3868 739990203 739988704 0.000000e+00 2771
2 TraesCS3A01G526200 chr3A 91.819 1039 74 6 998 2029 740079072 740078038 0.000000e+00 1437
3 TraesCS3A01G526200 chr3A 97.382 802 20 1 3067 3868 725138883 725138083 0.000000e+00 1363
4 TraesCS3A01G526200 chr3A 96.810 815 24 2 3054 3868 691461749 691462561 0.000000e+00 1360
5 TraesCS3A01G526200 chr3A 97.257 802 20 2 3067 3868 47933075 47932276 0.000000e+00 1358
6 TraesCS3A01G526200 chr3A 97.132 802 22 1 3067 3868 26846771 26845971 0.000000e+00 1352
7 TraesCS3A01G526200 chr3A 91.070 963 86 0 1001 1963 744085710 744084748 0.000000e+00 1303
8 TraesCS3A01G526200 chr3A 90.975 964 86 1 1001 1964 744195469 744194507 0.000000e+00 1297
9 TraesCS3A01G526200 chr3A 90.871 964 88 0 1001 1964 744216535 744215572 0.000000e+00 1293
10 TraesCS3A01G526200 chr3A 86.378 624 47 17 220 818 708952351 708951741 0.000000e+00 647
11 TraesCS3A01G526200 chr3A 99.468 188 1 0 632 819 740005885 740005698 3.700000e-90 342
12 TraesCS3A01G526200 chr3A 88.172 186 20 2 2702 2886 744193968 744193784 1.810000e-53 220
13 TraesCS3A01G526200 chr3A 88.172 186 20 2 2702 2886 744215033 744214849 1.810000e-53 220
14 TraesCS3A01G526200 chr3A 87.059 170 20 2 2718 2886 744083404 744083236 1.420000e-44 191
15 TraesCS3A01G526200 chr4A 99.022 818 7 1 1 818 715996792 715997608 0.000000e+00 1465
16 TraesCS3A01G526200 chr4A 98.289 818 14 0 1 818 628612695 628611878 0.000000e+00 1434
17 TraesCS3A01G526200 chr4A 96.906 808 24 1 3061 3868 612953391 612952585 0.000000e+00 1352
18 TraesCS3A01G526200 chr4A 94.085 727 32 4 1 727 45413075 45412360 0.000000e+00 1094
19 TraesCS3A01G526200 chr4A 99.468 188 1 0 632 819 628617216 628617029 3.700000e-90 342
20 TraesCS3A01G526200 chr4A 99.468 188 1 0 632 819 715992269 715992456 3.700000e-90 342
21 TraesCS3A01G526200 chr3D 91.900 1037 75 5 998 2028 607667482 607666449 0.000000e+00 1441
22 TraesCS3A01G526200 chr3D 90.000 980 98 0 985 1964 610166166 610167145 0.000000e+00 1267
23 TraesCS3A01G526200 chr3D 95.052 667 33 0 1322 1988 607409137 607408471 0.000000e+00 1050
24 TraesCS3A01G526200 chr3D 92.127 724 33 13 2369 3068 607408401 607407678 0.000000e+00 1000
25 TraesCS3A01G526200 chr5A 97.947 828 14 3 1 826 673546837 673547663 0.000000e+00 1432
26 TraesCS3A01G526200 chr3B 91.576 1009 79 6 998 2002 817353615 817352609 0.000000e+00 1387
27 TraesCS3A01G526200 chr3B 90.130 1003 96 3 985 1986 821978373 821979373 0.000000e+00 1301
28 TraesCS3A01G526200 chr3B 90.061 986 89 5 985 1964 821858273 821857291 0.000000e+00 1269
29 TraesCS3A01G526200 chr6A 96.703 819 24 3 3052 3868 573122913 573122096 0.000000e+00 1360
30 TraesCS3A01G526200 chr6A 97.143 805 22 1 3064 3868 8680934 8681737 0.000000e+00 1358
31 TraesCS3A01G526200 chr7A 97.022 806 23 1 3063 3868 48586415 48587219 0.000000e+00 1354
32 TraesCS3A01G526200 chr7A 96.679 813 24 3 3058 3868 724167358 724166547 0.000000e+00 1349
33 TraesCS3A01G526200 chr7A 80.061 326 49 13 5 320 11050608 11050927 1.080000e-55 228
34 TraesCS3A01G526200 chr7D 97.872 188 4 0 632 819 94113021 94112834 3.730000e-85 326
35 TraesCS3A01G526200 chr7D 83.082 331 37 10 5 320 615779320 615778994 2.270000e-72 283
36 TraesCS3A01G526200 chr6D 83.384 331 38 9 5 320 429474662 429474334 1.360000e-74 291
37 TraesCS3A01G526200 chr2D 83.082 331 39 9 5 320 46692925 46693253 6.330000e-73 285
38 TraesCS3A01G526200 chr5D 82.779 331 40 9 5 320 41777476 41777148 2.940000e-71 279


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G526200 chr3A 739988704 739992571 3867 True 3290.5 3810 100.0000 1 3868 2 chr3A.!!$R7 3867
1 TraesCS3A01G526200 chr3A 740078038 740079072 1034 True 1437.0 1437 91.8190 998 2029 1 chr3A.!!$R6 1031
2 TraesCS3A01G526200 chr3A 725138083 725138883 800 True 1363.0 1363 97.3820 3067 3868 1 chr3A.!!$R4 801
3 TraesCS3A01G526200 chr3A 691461749 691462561 812 False 1360.0 1360 96.8100 3054 3868 1 chr3A.!!$F1 814
4 TraesCS3A01G526200 chr3A 47932276 47933075 799 True 1358.0 1358 97.2570 3067 3868 1 chr3A.!!$R2 801
5 TraesCS3A01G526200 chr3A 26845971 26846771 800 True 1352.0 1352 97.1320 3067 3868 1 chr3A.!!$R1 801
6 TraesCS3A01G526200 chr3A 744193784 744195469 1685 True 758.5 1297 89.5735 1001 2886 2 chr3A.!!$R9 1885
7 TraesCS3A01G526200 chr3A 744214849 744216535 1686 True 756.5 1293 89.5215 1001 2886 2 chr3A.!!$R10 1885
8 TraesCS3A01G526200 chr3A 744083236 744085710 2474 True 747.0 1303 89.0645 1001 2886 2 chr3A.!!$R8 1885
9 TraesCS3A01G526200 chr3A 708951741 708952351 610 True 647.0 647 86.3780 220 818 1 chr3A.!!$R3 598
10 TraesCS3A01G526200 chr4A 715996792 715997608 816 False 1465.0 1465 99.0220 1 818 1 chr4A.!!$F2 817
11 TraesCS3A01G526200 chr4A 628611878 628612695 817 True 1434.0 1434 98.2890 1 818 1 chr4A.!!$R3 817
12 TraesCS3A01G526200 chr4A 612952585 612953391 806 True 1352.0 1352 96.9060 3061 3868 1 chr4A.!!$R2 807
13 TraesCS3A01G526200 chr4A 45412360 45413075 715 True 1094.0 1094 94.0850 1 727 1 chr4A.!!$R1 726
14 TraesCS3A01G526200 chr3D 607666449 607667482 1033 True 1441.0 1441 91.9000 998 2028 1 chr3D.!!$R1 1030
15 TraesCS3A01G526200 chr3D 610166166 610167145 979 False 1267.0 1267 90.0000 985 1964 1 chr3D.!!$F1 979
16 TraesCS3A01G526200 chr3D 607407678 607409137 1459 True 1025.0 1050 93.5895 1322 3068 2 chr3D.!!$R2 1746
17 TraesCS3A01G526200 chr5A 673546837 673547663 826 False 1432.0 1432 97.9470 1 826 1 chr5A.!!$F1 825
18 TraesCS3A01G526200 chr3B 817352609 817353615 1006 True 1387.0 1387 91.5760 998 2002 1 chr3B.!!$R1 1004
19 TraesCS3A01G526200 chr3B 821978373 821979373 1000 False 1301.0 1301 90.1300 985 1986 1 chr3B.!!$F1 1001
20 TraesCS3A01G526200 chr3B 821857291 821858273 982 True 1269.0 1269 90.0610 985 1964 1 chr3B.!!$R2 979
21 TraesCS3A01G526200 chr6A 573122096 573122913 817 True 1360.0 1360 96.7030 3052 3868 1 chr6A.!!$R1 816
22 TraesCS3A01G526200 chr6A 8680934 8681737 803 False 1358.0 1358 97.1430 3064 3868 1 chr6A.!!$F1 804
23 TraesCS3A01G526200 chr7A 48586415 48587219 804 False 1354.0 1354 97.0220 3063 3868 1 chr7A.!!$F2 805
24 TraesCS3A01G526200 chr7A 724166547 724167358 811 True 1349.0 1349 96.6790 3058 3868 1 chr7A.!!$R1 810

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
907 908 0.034896 AATCGAACGAACCAGGCAGT 59.965 50.0 0.12 0.0 0.0 4.40 F
966 967 0.034960 GCCACCTTTTCCTCCTCTCC 60.035 60.0 0.00 0.0 0.0 3.71 F
970 971 0.250513 CCTTTTCCTCCTCTCCCACG 59.749 60.0 0.00 0.0 0.0 4.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2750 3695 0.598065 GCGAAATTGCCTTCCACACT 59.402 50.000 0.00 0.00 0.0 3.55 R
2861 3806 0.839946 ATGGGCGGATGTTCTAGCTT 59.160 50.000 0.00 0.00 0.0 3.74 R
2920 3865 2.933573 AGTACCCTCTTGATCGACGAT 58.066 47.619 10.78 10.78 0.0 3.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
210 211 6.208988 AGCAGAGTCGATGTCAACTAAATA 57.791 37.500 0.00 0.00 0.00 1.40
388 389 1.733402 CGCACCAAGCAGTTTCCCAA 61.733 55.000 0.00 0.00 46.13 4.12
429 430 2.881352 GAGTACGCTCAGCCACGC 60.881 66.667 0.00 0.00 41.29 5.34
430 431 4.436998 AGTACGCTCAGCCACGCC 62.437 66.667 0.00 0.00 0.00 5.68
454 455 3.403057 CGGTCGACACGCAACAGG 61.403 66.667 18.91 0.00 0.00 4.00
455 456 3.712881 GGTCGACACGCAACAGGC 61.713 66.667 18.91 0.00 39.90 4.85
456 457 2.964925 GTCGACACGCAACAGGCA 60.965 61.111 11.55 0.00 45.17 4.75
457 458 2.661537 TCGACACGCAACAGGCAG 60.662 61.111 0.00 0.00 45.17 4.85
458 459 4.374702 CGACACGCAACAGGCAGC 62.375 66.667 0.00 0.00 45.17 5.25
459 460 3.279116 GACACGCAACAGGCAGCA 61.279 61.111 0.00 0.00 45.17 4.41
460 461 3.245948 GACACGCAACAGGCAGCAG 62.246 63.158 0.00 0.00 45.17 4.24
461 462 3.282157 CACGCAACAGGCAGCAGT 61.282 61.111 0.00 0.00 45.17 4.40
462 463 1.960763 CACGCAACAGGCAGCAGTA 60.961 57.895 0.00 0.00 45.17 2.74
463 464 1.669115 ACGCAACAGGCAGCAGTAG 60.669 57.895 0.00 0.00 45.17 2.57
464 465 1.374631 CGCAACAGGCAGCAGTAGA 60.375 57.895 0.00 0.00 45.17 2.59
465 466 1.630244 CGCAACAGGCAGCAGTAGAC 61.630 60.000 0.00 0.00 45.17 2.59
466 467 1.301677 GCAACAGGCAGCAGTAGACC 61.302 60.000 0.00 0.00 43.97 3.85
467 468 1.016130 CAACAGGCAGCAGTAGACCG 61.016 60.000 0.00 0.00 0.00 4.79
468 469 2.172483 AACAGGCAGCAGTAGACCGG 62.172 60.000 0.00 0.00 0.00 5.28
469 470 2.283966 AGGCAGCAGTAGACCGGT 60.284 61.111 6.92 6.92 0.00 5.28
470 471 2.184579 GGCAGCAGTAGACCGGTC 59.815 66.667 27.67 27.67 0.00 4.79
471 472 2.202623 GCAGCAGTAGACCGGTCG 60.203 66.667 28.26 15.45 34.09 4.79
472 473 2.202623 CAGCAGTAGACCGGTCGC 60.203 66.667 28.26 24.07 34.09 5.19
473 474 3.812019 AGCAGTAGACCGGTCGCG 61.812 66.667 28.26 18.17 34.09 5.87
474 475 4.849329 GCAGTAGACCGGTCGCGG 62.849 72.222 28.26 23.99 34.09 6.46
475 476 4.849329 CAGTAGACCGGTCGCGGC 62.849 72.222 28.26 18.50 34.09 6.53
493 494 3.368571 GCTCCTTGCCGCAGCTTT 61.369 61.111 0.00 0.00 40.80 3.51
494 495 2.564975 CTCCTTGCCGCAGCTTTG 59.435 61.111 0.00 0.00 40.80 2.77
495 496 1.968017 CTCCTTGCCGCAGCTTTGA 60.968 57.895 0.00 0.00 40.80 2.69
496 497 1.919956 CTCCTTGCCGCAGCTTTGAG 61.920 60.000 0.00 0.00 40.80 3.02
497 498 1.968017 CCTTGCCGCAGCTTTGAGA 60.968 57.895 0.00 0.00 40.80 3.27
498 499 1.310933 CCTTGCCGCAGCTTTGAGAT 61.311 55.000 0.00 0.00 40.80 2.75
499 500 1.372582 CTTGCCGCAGCTTTGAGATA 58.627 50.000 0.00 0.00 40.80 1.98
500 501 1.739466 CTTGCCGCAGCTTTGAGATAA 59.261 47.619 0.00 0.00 40.80 1.75
501 502 1.086696 TGCCGCAGCTTTGAGATAAC 58.913 50.000 0.00 0.00 40.80 1.89
502 503 0.378610 GCCGCAGCTTTGAGATAACC 59.621 55.000 0.00 0.00 35.50 2.85
503 504 2.014068 GCCGCAGCTTTGAGATAACCT 61.014 52.381 0.00 0.00 35.50 3.50
504 505 1.936547 CCGCAGCTTTGAGATAACCTC 59.063 52.381 0.00 0.00 42.30 3.85
505 506 1.590238 CGCAGCTTTGAGATAACCTCG 59.410 52.381 0.00 0.00 44.92 4.63
506 507 1.328986 GCAGCTTTGAGATAACCTCGC 59.671 52.381 0.00 0.00 44.92 5.03
507 508 2.621338 CAGCTTTGAGATAACCTCGCA 58.379 47.619 0.00 0.00 44.92 5.10
508 509 2.606725 CAGCTTTGAGATAACCTCGCAG 59.393 50.000 0.00 0.00 44.92 5.18
509 510 1.936547 GCTTTGAGATAACCTCGCAGG 59.063 52.381 1.16 1.16 44.92 4.85
534 535 4.447989 AGCAGCTCGAGTGCGCAT 62.448 61.111 24.38 1.95 46.06 4.73
535 536 3.922893 GCAGCTCGAGTGCGCATC 61.923 66.667 15.91 11.53 38.13 3.91
536 537 2.507769 CAGCTCGAGTGCGCATCA 60.508 61.111 15.91 0.00 38.13 3.07
537 538 2.096442 CAGCTCGAGTGCGCATCAA 61.096 57.895 15.91 0.00 38.13 2.57
538 539 1.153489 AGCTCGAGTGCGCATCAAT 60.153 52.632 15.91 0.00 38.13 2.57
539 540 1.150567 AGCTCGAGTGCGCATCAATC 61.151 55.000 15.91 9.09 36.50 2.67
540 541 1.423721 GCTCGAGTGCGCATCAATCA 61.424 55.000 15.91 0.00 39.59 2.57
541 542 0.299895 CTCGAGTGCGCATCAATCAC 59.700 55.000 15.91 0.00 39.59 3.06
542 543 1.083806 TCGAGTGCGCATCAATCACC 61.084 55.000 15.91 0.00 39.59 4.02
543 544 1.360931 CGAGTGCGCATCAATCACCA 61.361 55.000 15.91 0.00 39.59 4.17
544 545 0.097674 GAGTGCGCATCAATCACCAC 59.902 55.000 15.91 0.00 39.43 4.16
545 546 1.137404 GTGCGCATCAATCACCACC 59.863 57.895 15.91 0.00 0.00 4.61
546 547 2.397754 TGCGCATCAATCACCACCG 61.398 57.895 5.66 0.00 0.00 4.94
547 548 2.106074 GCGCATCAATCACCACCGA 61.106 57.895 0.30 0.00 0.00 4.69
548 549 1.439353 GCGCATCAATCACCACCGAT 61.439 55.000 0.30 0.00 0.00 4.18
549 550 1.864565 CGCATCAATCACCACCGATA 58.135 50.000 0.00 0.00 0.00 2.92
550 551 1.794701 CGCATCAATCACCACCGATAG 59.205 52.381 0.00 0.00 0.00 2.08
551 552 1.532868 GCATCAATCACCACCGATAGC 59.467 52.381 0.00 0.00 0.00 2.97
552 553 2.146342 CATCAATCACCACCGATAGCC 58.854 52.381 0.00 0.00 0.00 3.93
553 554 0.104120 TCAATCACCACCGATAGCCG 59.896 55.000 0.00 0.00 38.18 5.52
554 555 1.227556 AATCACCACCGATAGCCGC 60.228 57.895 0.00 0.00 36.84 6.53
555 556 1.966901 AATCACCACCGATAGCCGCA 61.967 55.000 0.00 0.00 36.84 5.69
556 557 1.966901 ATCACCACCGATAGCCGCAA 61.967 55.000 0.00 0.00 36.84 4.85
557 558 1.743623 CACCACCGATAGCCGCAAA 60.744 57.895 0.00 0.00 36.84 3.68
558 559 1.095228 CACCACCGATAGCCGCAAAT 61.095 55.000 0.00 0.00 36.84 2.32
559 560 0.814010 ACCACCGATAGCCGCAAATC 60.814 55.000 0.00 0.00 36.84 2.17
560 561 0.813610 CCACCGATAGCCGCAAATCA 60.814 55.000 0.00 0.00 36.84 2.57
561 562 0.304705 CACCGATAGCCGCAAATCAC 59.695 55.000 0.00 0.00 36.84 3.06
562 563 1.151777 ACCGATAGCCGCAAATCACG 61.152 55.000 0.00 0.00 36.84 4.35
570 571 2.942879 GCAAATCACGGCGACACA 59.057 55.556 16.62 0.00 0.00 3.72
571 572 1.154413 GCAAATCACGGCGACACAG 60.154 57.895 16.62 0.00 0.00 3.66
572 573 1.154413 CAAATCACGGCGACACAGC 60.154 57.895 16.62 0.00 0.00 4.40
573 574 1.596752 AAATCACGGCGACACAGCA 60.597 52.632 16.62 0.00 39.27 4.41
574 575 1.841663 AAATCACGGCGACACAGCAC 61.842 55.000 16.62 0.00 39.27 4.40
575 576 4.961511 TCACGGCGACACAGCACC 62.962 66.667 16.62 0.00 39.27 5.01
581 582 3.869187 CGACACAGCACCGCAATA 58.131 55.556 0.00 0.00 0.00 1.90
582 583 1.709760 CGACACAGCACCGCAATAG 59.290 57.895 0.00 0.00 0.00 1.73
583 584 1.695893 CGACACAGCACCGCAATAGG 61.696 60.000 0.00 0.00 37.30 2.57
585 586 0.250727 ACACAGCACCGCAATAGGTT 60.251 50.000 0.00 0.00 43.00 3.50
586 587 0.168788 CACAGCACCGCAATAGGTTG 59.831 55.000 0.00 0.00 43.00 3.77
587 588 0.036164 ACAGCACCGCAATAGGTTGA 59.964 50.000 0.00 0.00 43.00 3.18
588 589 1.164411 CAGCACCGCAATAGGTTGAA 58.836 50.000 0.00 0.00 43.00 2.69
589 590 1.539388 CAGCACCGCAATAGGTTGAAA 59.461 47.619 0.00 0.00 43.00 2.69
590 591 2.164219 CAGCACCGCAATAGGTTGAAAT 59.836 45.455 0.00 0.00 43.00 2.17
591 592 2.423538 AGCACCGCAATAGGTTGAAATC 59.576 45.455 0.00 0.00 43.00 2.17
592 593 2.163412 GCACCGCAATAGGTTGAAATCA 59.837 45.455 0.00 0.00 43.00 2.57
593 594 3.758300 CACCGCAATAGGTTGAAATCAC 58.242 45.455 0.00 0.00 43.00 3.06
594 595 3.190327 CACCGCAATAGGTTGAAATCACA 59.810 43.478 0.00 0.00 43.00 3.58
595 596 3.440173 ACCGCAATAGGTTGAAATCACAG 59.560 43.478 0.00 0.00 43.00 3.66
596 597 3.429085 CGCAATAGGTTGAAATCACAGC 58.571 45.455 0.00 0.00 37.53 4.40
597 598 3.119884 CGCAATAGGTTGAAATCACAGCA 60.120 43.478 0.00 0.00 37.53 4.41
598 599 4.615682 CGCAATAGGTTGAAATCACAGCAA 60.616 41.667 0.00 0.00 37.53 3.91
599 600 5.229423 GCAATAGGTTGAAATCACAGCAAA 58.771 37.500 0.00 0.00 37.53 3.68
600 601 5.695816 GCAATAGGTTGAAATCACAGCAAAA 59.304 36.000 0.00 0.00 37.53 2.44
601 602 6.202570 GCAATAGGTTGAAATCACAGCAAAAA 59.797 34.615 0.00 0.00 37.53 1.94
622 623 6.809630 AAAACAGAGAAGATTAACCTGCTC 57.190 37.500 0.00 0.00 38.81 4.26
623 624 4.479786 ACAGAGAAGATTAACCTGCTCC 57.520 45.455 0.51 0.00 39.24 4.70
624 625 3.118956 ACAGAGAAGATTAACCTGCTCCG 60.119 47.826 0.51 0.00 39.24 4.63
625 626 3.131223 CAGAGAAGATTAACCTGCTCCGA 59.869 47.826 0.51 0.00 39.24 4.55
626 627 3.964031 AGAGAAGATTAACCTGCTCCGAT 59.036 43.478 0.51 0.00 39.24 4.18
627 628 4.054671 GAGAAGATTAACCTGCTCCGATG 58.945 47.826 0.00 0.00 33.56 3.84
628 629 2.246719 AGATTAACCTGCTCCGATGC 57.753 50.000 0.00 0.00 0.00 3.91
629 630 1.202698 AGATTAACCTGCTCCGATGCC 60.203 52.381 0.00 0.00 0.00 4.40
630 631 0.546122 ATTAACCTGCTCCGATGCCA 59.454 50.000 0.00 0.00 0.00 4.92
631 632 0.546122 TTAACCTGCTCCGATGCCAT 59.454 50.000 0.00 0.00 0.00 4.40
632 633 0.179048 TAACCTGCTCCGATGCCATG 60.179 55.000 0.00 0.00 0.00 3.66
633 634 2.191375 CCTGCTCCGATGCCATGT 59.809 61.111 0.00 0.00 0.00 3.21
634 635 1.452651 CCTGCTCCGATGCCATGTT 60.453 57.895 0.00 0.00 0.00 2.71
635 636 1.721664 CCTGCTCCGATGCCATGTTG 61.722 60.000 0.00 0.00 0.00 3.33
636 637 0.745486 CTGCTCCGATGCCATGTTGA 60.745 55.000 0.00 0.00 0.00 3.18
637 638 0.322366 TGCTCCGATGCCATGTTGAA 60.322 50.000 0.00 0.00 0.00 2.69
638 639 0.810648 GCTCCGATGCCATGTTGAAA 59.189 50.000 0.00 0.00 0.00 2.69
639 640 1.202114 GCTCCGATGCCATGTTGAAAA 59.798 47.619 0.00 0.00 0.00 2.29
640 641 2.159198 GCTCCGATGCCATGTTGAAAAT 60.159 45.455 0.00 0.00 0.00 1.82
641 642 3.699067 CTCCGATGCCATGTTGAAAATC 58.301 45.455 0.00 0.00 0.00 2.17
642 643 3.087781 TCCGATGCCATGTTGAAAATCA 58.912 40.909 0.00 0.00 0.00 2.57
643 644 3.700539 TCCGATGCCATGTTGAAAATCAT 59.299 39.130 0.00 0.00 0.00 2.45
644 645 4.886489 TCCGATGCCATGTTGAAAATCATA 59.114 37.500 0.00 0.00 0.00 2.15
645 646 5.535783 TCCGATGCCATGTTGAAAATCATAT 59.464 36.000 0.00 0.00 0.00 1.78
646 647 5.631929 CCGATGCCATGTTGAAAATCATATG 59.368 40.000 0.00 0.00 0.00 1.78
647 648 6.440436 CGATGCCATGTTGAAAATCATATGA 58.560 36.000 8.10 8.10 0.00 2.15
648 649 6.581166 CGATGCCATGTTGAAAATCATATGAG 59.419 38.462 11.78 0.00 0.00 2.90
649 650 7.520937 CGATGCCATGTTGAAAATCATATGAGA 60.521 37.037 11.78 0.00 0.00 3.27
650 651 7.591421 TGCCATGTTGAAAATCATATGAGAT 57.409 32.000 11.78 0.00 0.00 2.75
651 652 8.014070 TGCCATGTTGAAAATCATATGAGATT 57.986 30.769 11.78 8.37 39.81 2.40
653 654 8.761497 GCCATGTTGAAAATCATATGAGATTTG 58.239 33.333 18.76 8.53 44.96 2.32
665 666 8.151141 TCATATGAGATTTGAGTGATTTGAGC 57.849 34.615 0.00 0.00 0.00 4.26
666 667 7.991460 TCATATGAGATTTGAGTGATTTGAGCT 59.009 33.333 0.00 0.00 0.00 4.09
667 668 9.269453 CATATGAGATTTGAGTGATTTGAGCTA 57.731 33.333 0.00 0.00 0.00 3.32
668 669 7.789273 ATGAGATTTGAGTGATTTGAGCTAG 57.211 36.000 0.00 0.00 0.00 3.42
669 670 6.111382 TGAGATTTGAGTGATTTGAGCTAGG 58.889 40.000 0.00 0.00 0.00 3.02
670 671 5.435291 AGATTTGAGTGATTTGAGCTAGGG 58.565 41.667 0.00 0.00 0.00 3.53
671 672 4.908601 TTTGAGTGATTTGAGCTAGGGA 57.091 40.909 0.00 0.00 0.00 4.20
672 673 5.441718 TTTGAGTGATTTGAGCTAGGGAT 57.558 39.130 0.00 0.00 0.00 3.85
673 674 5.441718 TTGAGTGATTTGAGCTAGGGATT 57.558 39.130 0.00 0.00 0.00 3.01
674 675 5.441718 TGAGTGATTTGAGCTAGGGATTT 57.558 39.130 0.00 0.00 0.00 2.17
675 676 5.188434 TGAGTGATTTGAGCTAGGGATTTG 58.812 41.667 0.00 0.00 0.00 2.32
676 677 5.045651 TGAGTGATTTGAGCTAGGGATTTGA 60.046 40.000 0.00 0.00 0.00 2.69
677 678 5.435291 AGTGATTTGAGCTAGGGATTTGAG 58.565 41.667 0.00 0.00 0.00 3.02
678 679 4.578105 GTGATTTGAGCTAGGGATTTGAGG 59.422 45.833 0.00 0.00 0.00 3.86
679 680 3.652057 TTTGAGCTAGGGATTTGAGGG 57.348 47.619 0.00 0.00 0.00 4.30
680 681 2.568546 TGAGCTAGGGATTTGAGGGA 57.431 50.000 0.00 0.00 0.00 4.20
681 682 2.402564 TGAGCTAGGGATTTGAGGGAG 58.597 52.381 0.00 0.00 0.00 4.30
682 683 1.071542 GAGCTAGGGATTTGAGGGAGC 59.928 57.143 0.00 0.00 0.00 4.70
683 684 0.839946 GCTAGGGATTTGAGGGAGCA 59.160 55.000 0.00 0.00 0.00 4.26
684 685 1.423161 GCTAGGGATTTGAGGGAGCAT 59.577 52.381 0.00 0.00 0.00 3.79
685 686 2.813354 GCTAGGGATTTGAGGGAGCATG 60.813 54.545 0.00 0.00 0.00 4.06
686 687 1.600058 AGGGATTTGAGGGAGCATGA 58.400 50.000 0.00 0.00 0.00 3.07
687 688 1.925255 AGGGATTTGAGGGAGCATGAA 59.075 47.619 0.00 0.00 0.00 2.57
688 689 2.091994 AGGGATTTGAGGGAGCATGAAG 60.092 50.000 0.00 0.00 0.00 3.02
689 690 2.092212 GGGATTTGAGGGAGCATGAAGA 60.092 50.000 0.00 0.00 0.00 2.87
690 691 3.624777 GGATTTGAGGGAGCATGAAGAA 58.375 45.455 0.00 0.00 0.00 2.52
691 692 3.631227 GGATTTGAGGGAGCATGAAGAAG 59.369 47.826 0.00 0.00 0.00 2.85
692 693 4.521146 GATTTGAGGGAGCATGAAGAAGA 58.479 43.478 0.00 0.00 0.00 2.87
693 694 3.623906 TTGAGGGAGCATGAAGAAGAG 57.376 47.619 0.00 0.00 0.00 2.85
694 695 1.836166 TGAGGGAGCATGAAGAAGAGG 59.164 52.381 0.00 0.00 0.00 3.69
695 696 2.114616 GAGGGAGCATGAAGAAGAGGA 58.885 52.381 0.00 0.00 0.00 3.71
696 697 2.705127 GAGGGAGCATGAAGAAGAGGAT 59.295 50.000 0.00 0.00 0.00 3.24
697 698 3.121688 AGGGAGCATGAAGAAGAGGATT 58.878 45.455 0.00 0.00 0.00 3.01
698 699 3.526841 AGGGAGCATGAAGAAGAGGATTT 59.473 43.478 0.00 0.00 0.00 2.17
699 700 3.631227 GGGAGCATGAAGAAGAGGATTTG 59.369 47.826 0.00 0.00 0.00 2.32
700 701 3.631227 GGAGCATGAAGAAGAGGATTTGG 59.369 47.826 0.00 0.00 0.00 3.28
701 702 3.629087 AGCATGAAGAAGAGGATTTGGG 58.371 45.455 0.00 0.00 0.00 4.12
702 703 2.692041 GCATGAAGAAGAGGATTTGGGG 59.308 50.000 0.00 0.00 0.00 4.96
703 704 3.625716 GCATGAAGAAGAGGATTTGGGGA 60.626 47.826 0.00 0.00 0.00 4.81
704 705 4.603131 CATGAAGAAGAGGATTTGGGGAA 58.397 43.478 0.00 0.00 0.00 3.97
705 706 4.740154 TGAAGAAGAGGATTTGGGGAAA 57.260 40.909 0.00 0.00 0.00 3.13
706 707 4.407365 TGAAGAAGAGGATTTGGGGAAAC 58.593 43.478 0.00 0.00 0.00 2.78
707 708 4.106341 TGAAGAAGAGGATTTGGGGAAACT 59.894 41.667 0.00 0.00 0.00 2.66
708 709 4.308526 AGAAGAGGATTTGGGGAAACTC 57.691 45.455 0.00 0.00 0.00 3.01
709 710 3.919554 AGAAGAGGATTTGGGGAAACTCT 59.080 43.478 0.00 0.00 37.30 3.24
710 711 3.728385 AGAGGATTTGGGGAAACTCTG 57.272 47.619 0.00 0.00 35.56 3.35
711 712 2.310052 AGAGGATTTGGGGAAACTCTGG 59.690 50.000 0.00 0.00 35.56 3.86
712 713 2.308866 GAGGATTTGGGGAAACTCTGGA 59.691 50.000 0.00 0.00 0.00 3.86
713 714 2.929043 AGGATTTGGGGAAACTCTGGAT 59.071 45.455 0.00 0.00 0.00 3.41
714 715 3.053320 AGGATTTGGGGAAACTCTGGATC 60.053 47.826 0.00 0.00 0.00 3.36
715 716 2.489938 TTTGGGGAAACTCTGGATCG 57.510 50.000 0.00 0.00 0.00 3.69
716 717 1.358152 TTGGGGAAACTCTGGATCGT 58.642 50.000 0.00 0.00 0.00 3.73
717 718 1.358152 TGGGGAAACTCTGGATCGTT 58.642 50.000 0.00 0.00 0.00 3.85
718 719 1.278127 TGGGGAAACTCTGGATCGTTC 59.722 52.381 0.00 0.00 0.00 3.95
719 720 1.407025 GGGGAAACTCTGGATCGTTCC 60.407 57.143 5.52 5.52 42.94 3.62
730 731 1.520666 ATCGTTCCACACCGATCCC 59.479 57.895 0.00 0.00 39.45 3.85
731 732 0.976073 ATCGTTCCACACCGATCCCT 60.976 55.000 0.00 0.00 39.45 4.20
732 733 1.189524 TCGTTCCACACCGATCCCTT 61.190 55.000 0.00 0.00 0.00 3.95
733 734 0.739813 CGTTCCACACCGATCCCTTC 60.740 60.000 0.00 0.00 0.00 3.46
734 735 0.613777 GTTCCACACCGATCCCTTCT 59.386 55.000 0.00 0.00 0.00 2.85
735 736 0.902531 TTCCACACCGATCCCTTCTC 59.097 55.000 0.00 0.00 0.00 2.87
736 737 0.041238 TCCACACCGATCCCTTCTCT 59.959 55.000 0.00 0.00 0.00 3.10
737 738 0.461961 CCACACCGATCCCTTCTCTC 59.538 60.000 0.00 0.00 0.00 3.20
738 739 1.479709 CACACCGATCCCTTCTCTCT 58.520 55.000 0.00 0.00 0.00 3.10
739 740 1.135915 CACACCGATCCCTTCTCTCTG 59.864 57.143 0.00 0.00 0.00 3.35
740 741 1.272760 ACACCGATCCCTTCTCTCTGT 60.273 52.381 0.00 0.00 0.00 3.41
741 742 2.025226 ACACCGATCCCTTCTCTCTGTA 60.025 50.000 0.00 0.00 0.00 2.74
742 743 2.359531 CACCGATCCCTTCTCTCTGTAC 59.640 54.545 0.00 0.00 0.00 2.90
743 744 2.242708 ACCGATCCCTTCTCTCTGTACT 59.757 50.000 0.00 0.00 0.00 2.73
744 745 3.292460 CCGATCCCTTCTCTCTGTACTT 58.708 50.000 0.00 0.00 0.00 2.24
745 746 4.079901 ACCGATCCCTTCTCTCTGTACTTA 60.080 45.833 0.00 0.00 0.00 2.24
746 747 5.074115 CCGATCCCTTCTCTCTGTACTTAT 58.926 45.833 0.00 0.00 0.00 1.73
747 748 5.536916 CCGATCCCTTCTCTCTGTACTTATT 59.463 44.000 0.00 0.00 0.00 1.40
748 749 6.041069 CCGATCCCTTCTCTCTGTACTTATTT 59.959 42.308 0.00 0.00 0.00 1.40
749 750 7.230913 CCGATCCCTTCTCTCTGTACTTATTTA 59.769 40.741 0.00 0.00 0.00 1.40
750 751 8.798402 CGATCCCTTCTCTCTGTACTTATTTAT 58.202 37.037 0.00 0.00 0.00 1.40
779 780 9.500864 TTGTTTGTACAATTTACGTTTTAGTCC 57.499 29.630 9.56 0.00 39.29 3.85
780 781 8.127954 TGTTTGTACAATTTACGTTTTAGTCCC 58.872 33.333 9.56 0.00 0.00 4.46
781 782 8.344831 GTTTGTACAATTTACGTTTTAGTCCCT 58.655 33.333 9.56 0.00 0.00 4.20
782 783 9.553064 TTTGTACAATTTACGTTTTAGTCCCTA 57.447 29.630 9.56 0.00 0.00 3.53
783 784 9.553064 TTGTACAATTTACGTTTTAGTCCCTAA 57.447 29.630 3.59 0.00 0.00 2.69
784 785 9.206870 TGTACAATTTACGTTTTAGTCCCTAAG 57.793 33.333 0.00 0.00 0.00 2.18
785 786 9.423061 GTACAATTTACGTTTTAGTCCCTAAGA 57.577 33.333 0.00 0.00 0.00 2.10
786 787 8.907222 ACAATTTACGTTTTAGTCCCTAAGAA 57.093 30.769 0.00 0.00 0.00 2.52
787 788 8.996271 ACAATTTACGTTTTAGTCCCTAAGAAG 58.004 33.333 0.00 0.00 0.00 2.85
788 789 8.996271 CAATTTACGTTTTAGTCCCTAAGAAGT 58.004 33.333 0.00 0.00 30.92 3.01
789 790 8.768957 ATTTACGTTTTAGTCCCTAAGAAGTC 57.231 34.615 0.00 0.00 29.42 3.01
790 791 5.796424 ACGTTTTAGTCCCTAAGAAGTCA 57.204 39.130 0.00 0.00 0.00 3.41
791 792 5.536260 ACGTTTTAGTCCCTAAGAAGTCAC 58.464 41.667 0.00 0.00 0.00 3.67
792 793 4.928020 CGTTTTAGTCCCTAAGAAGTCACC 59.072 45.833 0.00 0.00 0.00 4.02
793 794 5.279356 CGTTTTAGTCCCTAAGAAGTCACCT 60.279 44.000 0.00 0.00 0.00 4.00
794 795 6.071728 CGTTTTAGTCCCTAAGAAGTCACCTA 60.072 42.308 0.00 0.00 0.00 3.08
795 796 7.524367 CGTTTTAGTCCCTAAGAAGTCACCTAA 60.524 40.741 0.00 0.00 0.00 2.69
796 797 8.319881 GTTTTAGTCCCTAAGAAGTCACCTAAT 58.680 37.037 0.00 0.00 0.00 1.73
797 798 8.445361 TTTAGTCCCTAAGAAGTCACCTAATT 57.555 34.615 0.00 0.00 0.00 1.40
798 799 9.551339 TTTAGTCCCTAAGAAGTCACCTAATTA 57.449 33.333 0.00 0.00 0.00 1.40
799 800 7.421087 AGTCCCTAAGAAGTCACCTAATTAC 57.579 40.000 0.00 0.00 0.00 1.89
800 801 6.958192 AGTCCCTAAGAAGTCACCTAATTACA 59.042 38.462 0.00 0.00 0.00 2.41
801 802 7.456902 AGTCCCTAAGAAGTCACCTAATTACAA 59.543 37.037 0.00 0.00 0.00 2.41
802 803 8.265764 GTCCCTAAGAAGTCACCTAATTACAAT 58.734 37.037 0.00 0.00 0.00 2.71
803 804 9.496710 TCCCTAAGAAGTCACCTAATTACAATA 57.503 33.333 0.00 0.00 0.00 1.90
822 823 7.015226 ACAATATTCATACACCAACACATCG 57.985 36.000 0.00 0.00 0.00 3.84
823 824 6.597672 ACAATATTCATACACCAACACATCGT 59.402 34.615 0.00 0.00 0.00 3.73
824 825 7.766738 ACAATATTCATACACCAACACATCGTA 59.233 33.333 0.00 0.00 0.00 3.43
825 826 8.608317 CAATATTCATACACCAACACATCGTAA 58.392 33.333 0.00 0.00 0.00 3.18
826 827 6.662414 ATTCATACACCAACACATCGTAAG 57.338 37.500 0.00 0.00 0.00 2.34
827 828 3.930229 TCATACACCAACACATCGTAAGC 59.070 43.478 0.00 0.00 37.18 3.09
828 829 2.543777 ACACCAACACATCGTAAGCT 57.456 45.000 0.00 0.00 37.18 3.74
829 830 3.671008 ACACCAACACATCGTAAGCTA 57.329 42.857 0.00 0.00 37.18 3.32
830 831 3.997762 ACACCAACACATCGTAAGCTAA 58.002 40.909 0.00 0.00 37.18 3.09
831 832 4.575885 ACACCAACACATCGTAAGCTAAT 58.424 39.130 0.00 0.00 37.18 1.73
832 833 4.630069 ACACCAACACATCGTAAGCTAATC 59.370 41.667 0.00 0.00 37.18 1.75
833 834 4.870426 CACCAACACATCGTAAGCTAATCT 59.130 41.667 0.00 0.00 37.18 2.40
834 835 5.005779 CACCAACACATCGTAAGCTAATCTC 59.994 44.000 0.00 0.00 37.18 2.75
835 836 5.105310 ACCAACACATCGTAAGCTAATCTCT 60.105 40.000 0.00 0.00 37.18 3.10
836 837 5.460419 CCAACACATCGTAAGCTAATCTCTC 59.540 44.000 0.00 0.00 37.18 3.20
837 838 4.849883 ACACATCGTAAGCTAATCTCTCG 58.150 43.478 0.00 0.00 37.18 4.04
838 839 4.575236 ACACATCGTAAGCTAATCTCTCGA 59.425 41.667 0.00 0.00 35.53 4.04
839 840 5.143660 CACATCGTAAGCTAATCTCTCGAG 58.856 45.833 5.93 5.93 34.93 4.04
840 841 3.881780 TCGTAAGCTAATCTCTCGAGC 57.118 47.619 7.81 0.00 36.42 5.03
841 842 2.221286 TCGTAAGCTAATCTCTCGAGCG 59.779 50.000 7.81 0.48 41.23 5.03
842 843 2.221286 CGTAAGCTAATCTCTCGAGCGA 59.779 50.000 7.70 7.70 41.23 4.93
843 844 3.663233 CGTAAGCTAATCTCTCGAGCGAG 60.663 52.174 11.28 13.36 41.23 5.03
844 845 0.591170 AGCTAATCTCTCGAGCGAGC 59.409 55.000 14.61 8.91 41.71 5.03
845 846 0.724453 GCTAATCTCTCGAGCGAGCG 60.724 60.000 14.61 9.16 41.71 5.03
846 847 0.862490 CTAATCTCTCGAGCGAGCGA 59.138 55.000 13.95 13.95 41.71 4.93
854 855 1.545759 TCGAGCGAGCGAGTAAAATG 58.454 50.000 0.00 0.00 35.01 2.32
855 856 0.572590 CGAGCGAGCGAGTAAAATGG 59.427 55.000 0.00 0.00 0.00 3.16
856 857 0.931005 GAGCGAGCGAGTAAAATGGG 59.069 55.000 0.00 0.00 0.00 4.00
857 858 0.535335 AGCGAGCGAGTAAAATGGGA 59.465 50.000 0.00 0.00 0.00 4.37
858 859 1.139058 AGCGAGCGAGTAAAATGGGAT 59.861 47.619 0.00 0.00 0.00 3.85
859 860 2.364324 AGCGAGCGAGTAAAATGGGATA 59.636 45.455 0.00 0.00 0.00 2.59
860 861 3.128349 GCGAGCGAGTAAAATGGGATAA 58.872 45.455 0.00 0.00 0.00 1.75
861 862 3.746492 GCGAGCGAGTAAAATGGGATAAT 59.254 43.478 0.00 0.00 0.00 1.28
862 863 4.213482 GCGAGCGAGTAAAATGGGATAATT 59.787 41.667 0.00 0.00 0.00 1.40
863 864 5.407387 GCGAGCGAGTAAAATGGGATAATTA 59.593 40.000 0.00 0.00 0.00 1.40
864 865 6.401153 GCGAGCGAGTAAAATGGGATAATTAG 60.401 42.308 0.00 0.00 0.00 1.73
865 866 6.645415 CGAGCGAGTAAAATGGGATAATTAGT 59.355 38.462 0.00 0.00 0.00 2.24
866 867 7.170998 CGAGCGAGTAAAATGGGATAATTAGTT 59.829 37.037 0.00 0.00 0.00 2.24
867 868 9.485206 GAGCGAGTAAAATGGGATAATTAGTTA 57.515 33.333 0.00 0.00 0.00 2.24
868 869 9.490379 AGCGAGTAAAATGGGATAATTAGTTAG 57.510 33.333 0.00 0.00 0.00 2.34
869 870 9.485206 GCGAGTAAAATGGGATAATTAGTTAGA 57.515 33.333 0.00 0.00 0.00 2.10
892 893 8.438676 AGAACAAACAATCCTTATCCTAATCG 57.561 34.615 0.00 0.00 0.00 3.34
893 894 8.265055 AGAACAAACAATCCTTATCCTAATCGA 58.735 33.333 0.00 0.00 0.00 3.59
894 895 8.801882 AACAAACAATCCTTATCCTAATCGAA 57.198 30.769 0.00 0.00 0.00 3.71
895 896 8.209917 ACAAACAATCCTTATCCTAATCGAAC 57.790 34.615 0.00 0.00 0.00 3.95
896 897 7.011109 ACAAACAATCCTTATCCTAATCGAACG 59.989 37.037 0.00 0.00 0.00 3.95
897 898 6.401047 ACAATCCTTATCCTAATCGAACGA 57.599 37.500 0.00 0.00 0.00 3.85
898 899 6.812998 ACAATCCTTATCCTAATCGAACGAA 58.187 36.000 0.12 0.00 0.00 3.85
899 900 6.700520 ACAATCCTTATCCTAATCGAACGAAC 59.299 38.462 0.12 0.00 0.00 3.95
900 901 5.192327 TCCTTATCCTAATCGAACGAACC 57.808 43.478 0.12 0.00 0.00 3.62
901 902 4.646040 TCCTTATCCTAATCGAACGAACCA 59.354 41.667 0.12 0.00 0.00 3.67
902 903 4.982916 CCTTATCCTAATCGAACGAACCAG 59.017 45.833 0.12 0.00 0.00 4.00
903 904 2.953466 TCCTAATCGAACGAACCAGG 57.047 50.000 0.12 8.09 0.00 4.45
904 905 1.134907 TCCTAATCGAACGAACCAGGC 60.135 52.381 13.42 0.00 0.00 4.85
905 906 1.404986 CCTAATCGAACGAACCAGGCA 60.405 52.381 0.12 0.00 0.00 4.75
906 907 1.927174 CTAATCGAACGAACCAGGCAG 59.073 52.381 0.12 0.00 0.00 4.85
907 908 0.034896 AATCGAACGAACCAGGCAGT 59.965 50.000 0.12 0.00 0.00 4.40
908 909 0.389948 ATCGAACGAACCAGGCAGTC 60.390 55.000 0.12 0.00 0.00 3.51
909 910 1.300620 CGAACGAACCAGGCAGTCA 60.301 57.895 0.00 0.00 0.00 3.41
910 911 1.284982 CGAACGAACCAGGCAGTCAG 61.285 60.000 0.00 0.00 0.00 3.51
911 912 0.951040 GAACGAACCAGGCAGTCAGG 60.951 60.000 0.00 0.00 0.00 3.86
912 913 2.743928 CGAACCAGGCAGTCAGGC 60.744 66.667 0.00 0.00 44.61 4.85
919 920 4.648626 GGCAGTCAGGCACCAGCA 62.649 66.667 0.00 0.00 44.61 4.41
920 921 2.360852 GCAGTCAGGCACCAGCAT 60.361 61.111 0.00 0.00 44.61 3.79
921 922 2.404995 GCAGTCAGGCACCAGCATC 61.405 63.158 0.00 0.00 44.61 3.91
922 923 1.002990 CAGTCAGGCACCAGCATCA 60.003 57.895 0.00 0.00 44.61 3.07
923 924 0.607217 CAGTCAGGCACCAGCATCAA 60.607 55.000 0.00 0.00 44.61 2.57
924 925 0.607489 AGTCAGGCACCAGCATCAAC 60.607 55.000 0.00 0.00 44.61 3.18
925 926 0.607489 GTCAGGCACCAGCATCAACT 60.607 55.000 0.00 0.00 44.61 3.16
926 927 0.983467 TCAGGCACCAGCATCAACTA 59.017 50.000 0.00 0.00 44.61 2.24
927 928 1.065926 TCAGGCACCAGCATCAACTAG 60.066 52.381 0.00 0.00 44.61 2.57
928 929 1.065926 CAGGCACCAGCATCAACTAGA 60.066 52.381 0.00 0.00 44.61 2.43
929 930 1.630369 AGGCACCAGCATCAACTAGAA 59.370 47.619 0.00 0.00 44.61 2.10
930 931 2.040278 AGGCACCAGCATCAACTAGAAA 59.960 45.455 0.00 0.00 44.61 2.52
931 932 3.019564 GGCACCAGCATCAACTAGAAAT 58.980 45.455 0.00 0.00 44.61 2.17
932 933 4.080356 AGGCACCAGCATCAACTAGAAATA 60.080 41.667 0.00 0.00 44.61 1.40
933 934 4.035675 GGCACCAGCATCAACTAGAAATAC 59.964 45.833 0.00 0.00 44.61 1.89
934 935 4.260375 GCACCAGCATCAACTAGAAATACG 60.260 45.833 0.00 0.00 41.58 3.06
935 936 3.871594 ACCAGCATCAACTAGAAATACGC 59.128 43.478 0.00 0.00 0.00 4.42
936 937 3.871006 CCAGCATCAACTAGAAATACGCA 59.129 43.478 0.00 0.00 0.00 5.24
937 938 4.260375 CCAGCATCAACTAGAAATACGCAC 60.260 45.833 0.00 0.00 0.00 5.34
938 939 3.871594 AGCATCAACTAGAAATACGCACC 59.128 43.478 0.00 0.00 0.00 5.01
939 940 3.002348 GCATCAACTAGAAATACGCACCC 59.998 47.826 0.00 0.00 0.00 4.61
940 941 4.442706 CATCAACTAGAAATACGCACCCT 58.557 43.478 0.00 0.00 0.00 4.34
941 942 4.546829 TCAACTAGAAATACGCACCCTT 57.453 40.909 0.00 0.00 0.00 3.95
942 943 4.501071 TCAACTAGAAATACGCACCCTTC 58.499 43.478 0.00 0.00 0.00 3.46
943 944 3.160777 ACTAGAAATACGCACCCTTCG 57.839 47.619 0.00 0.00 0.00 3.79
944 945 2.159142 ACTAGAAATACGCACCCTTCGG 60.159 50.000 0.00 0.00 0.00 4.30
945 946 0.743345 AGAAATACGCACCCTTCGGC 60.743 55.000 0.00 0.00 0.00 5.54
946 947 1.712018 GAAATACGCACCCTTCGGCC 61.712 60.000 0.00 0.00 0.00 6.13
947 948 4.524318 ATACGCACCCTTCGGCCG 62.524 66.667 22.12 22.12 34.37 6.13
956 957 2.983592 CTTCGGCCGCCACCTTTT 60.984 61.111 23.51 0.00 0.00 2.27
957 958 2.978018 CTTCGGCCGCCACCTTTTC 61.978 63.158 23.51 0.00 0.00 2.29
960 961 3.062466 GGCCGCCACCTTTTCCTC 61.062 66.667 3.91 0.00 0.00 3.71
961 962 3.062466 GCCGCCACCTTTTCCTCC 61.062 66.667 0.00 0.00 0.00 4.30
962 963 2.757077 CCGCCACCTTTTCCTCCT 59.243 61.111 0.00 0.00 0.00 3.69
963 964 1.377333 CCGCCACCTTTTCCTCCTC 60.377 63.158 0.00 0.00 0.00 3.71
964 965 1.679898 CGCCACCTTTTCCTCCTCT 59.320 57.895 0.00 0.00 0.00 3.69
965 966 0.391793 CGCCACCTTTTCCTCCTCTC 60.392 60.000 0.00 0.00 0.00 3.20
966 967 0.034960 GCCACCTTTTCCTCCTCTCC 60.035 60.000 0.00 0.00 0.00 3.71
967 968 0.621082 CCACCTTTTCCTCCTCTCCC 59.379 60.000 0.00 0.00 0.00 4.30
968 969 1.362224 CACCTTTTCCTCCTCTCCCA 58.638 55.000 0.00 0.00 0.00 4.37
969 970 1.003696 CACCTTTTCCTCCTCTCCCAC 59.996 57.143 0.00 0.00 0.00 4.61
970 971 0.250513 CCTTTTCCTCCTCTCCCACG 59.749 60.000 0.00 0.00 0.00 4.94
971 972 0.391793 CTTTTCCTCCTCTCCCACGC 60.392 60.000 0.00 0.00 0.00 5.34
972 973 1.838073 TTTTCCTCCTCTCCCACGCC 61.838 60.000 0.00 0.00 0.00 5.68
973 974 3.539593 TTCCTCCTCTCCCACGCCA 62.540 63.158 0.00 0.00 0.00 5.69
974 975 3.003173 CCTCCTCTCCCACGCCAA 61.003 66.667 0.00 0.00 0.00 4.52
975 976 2.581354 CTCCTCTCCCACGCCAAG 59.419 66.667 0.00 0.00 0.00 3.61
976 977 1.984570 CTCCTCTCCCACGCCAAGA 60.985 63.158 0.00 0.00 0.00 3.02
977 978 1.535444 TCCTCTCCCACGCCAAGAA 60.535 57.895 0.00 0.00 0.00 2.52
978 979 1.376037 CCTCTCCCACGCCAAGAAC 60.376 63.158 0.00 0.00 0.00 3.01
979 980 1.738099 CTCTCCCACGCCAAGAACG 60.738 63.158 0.00 0.00 0.00 3.95
980 981 2.030562 CTCCCACGCCAAGAACGT 59.969 61.111 0.00 0.00 46.42 3.99
981 982 1.597027 CTCCCACGCCAAGAACGTT 60.597 57.895 0.00 0.00 42.96 3.99
982 983 1.153127 TCCCACGCCAAGAACGTTT 60.153 52.632 0.46 0.00 42.96 3.60
983 984 0.748729 TCCCACGCCAAGAACGTTTT 60.749 50.000 0.46 0.00 42.96 2.43
995 996 5.182001 CCAAGAACGTTTTTCTCATCCTGAT 59.818 40.000 0.46 0.00 0.00 2.90
996 997 6.310197 CAAGAACGTTTTTCTCATCCTGATC 58.690 40.000 0.46 0.00 0.00 2.92
1026 1027 4.728102 CGCACTACCACCGCCGAA 62.728 66.667 0.00 0.00 0.00 4.30
1059 1060 2.348998 CTGTCGCCCAAGAAGCCT 59.651 61.111 0.00 0.00 0.00 4.58
1200 1295 0.331954 TTCCCAGCTACTCCGACTCT 59.668 55.000 0.00 0.00 0.00 3.24
1464 1565 0.832135 TCTTCACGGGCTTCTCCACT 60.832 55.000 0.00 0.00 36.21 4.00
1509 1610 2.358003 GACCAGAACGCTGCTGCT 60.358 61.111 14.03 0.00 40.91 4.24
1551 1652 1.153823 CTCCGGCGTCGTGAAGATT 60.154 57.895 9.28 0.00 33.95 2.40
1614 1715 2.591715 GGCGTGGTGCTCAACTGT 60.592 61.111 0.00 0.00 45.43 3.55
1617 1718 0.941542 GCGTGGTGCTCAACTGTTTA 59.058 50.000 0.00 0.00 41.73 2.01
1988 2103 9.507329 ACAAAATATGCTCTTTCTCTTTCTACA 57.493 29.630 0.00 0.00 0.00 2.74
1994 2109 8.940768 ATGCTCTTTCTCTTTCTACAATCTAC 57.059 34.615 0.00 0.00 0.00 2.59
1995 2110 7.896811 TGCTCTTTCTCTTTCTACAATCTACA 58.103 34.615 0.00 0.00 0.00 2.74
2029 2144 9.127277 ACTAGACTATGGACTAAACTCTTGATC 57.873 37.037 0.00 0.00 0.00 2.92
2033 2148 5.690464 ATGGACTAAACTCTTGATCTGCT 57.310 39.130 0.00 0.00 0.00 4.24
2034 2149 4.825422 TGGACTAAACTCTTGATCTGCTG 58.175 43.478 0.00 0.00 0.00 4.41
2035 2150 3.620821 GGACTAAACTCTTGATCTGCTGC 59.379 47.826 0.00 0.00 0.00 5.25
2409 2567 7.389279 ACAAATTTGTGGCATGTTTTGCACC 62.389 40.000 22.71 0.00 44.81 5.01
2486 2646 9.888878 GATTTATCATATATTCCCATCATTGCG 57.111 33.333 0.00 0.00 0.00 4.85
2506 2666 3.672781 GCGAGGTACTAAAACGAAGCTCT 60.673 47.826 0.00 0.00 41.55 4.09
2508 2668 4.323868 CGAGGTACTAAAACGAAGCTCTTG 59.676 45.833 0.00 0.00 41.55 3.02
2509 2669 5.211174 AGGTACTAAAACGAAGCTCTTGT 57.789 39.130 0.00 0.00 36.02 3.16
2510 2670 5.228665 AGGTACTAAAACGAAGCTCTTGTC 58.771 41.667 0.00 0.00 36.02 3.18
2511 2671 4.986659 GGTACTAAAACGAAGCTCTTGTCA 59.013 41.667 0.00 0.00 0.00 3.58
2517 2687 9.035607 ACTAAAACGAAGCTCTTGTCATATATG 57.964 33.333 6.36 6.36 0.00 1.78
2531 2701 9.950496 CTTGTCATATATGCTTTCTATAGGGTT 57.050 33.333 7.92 0.00 0.00 4.11
2633 2804 9.838975 TTTGTATTGTAATCTTGCACTATGTTG 57.161 29.630 0.00 0.00 0.00 3.33
2634 2805 7.471721 TGTATTGTAATCTTGCACTATGTTGC 58.528 34.615 0.00 0.00 43.31 4.17
2750 3695 2.609299 TTGGCGGGGAGGACATCA 60.609 61.111 0.00 0.00 0.00 3.07
2861 3806 0.826715 CTGAGATCTTCTTCGCCCCA 59.173 55.000 0.00 0.00 0.00 4.96
2920 3865 5.555017 AGCAGCTTTGATCTTGTTTCTAGA 58.445 37.500 0.00 0.00 0.00 2.43
2939 3884 2.879646 AGATCGTCGATCAAGAGGGTAC 59.120 50.000 31.17 6.57 41.12 3.34
2950 3895 9.144298 TCGATCAAGAGGGTACTAAAATAGAAT 57.856 33.333 0.00 0.00 0.00 2.40
2954 3899 7.494625 TCAAGAGGGTACTAAAATAGAATTGCG 59.505 37.037 0.00 0.00 0.00 4.85
3005 3957 9.066892 TGTAATAAGCATTAGATGGATTGTTCC 57.933 33.333 0.00 0.00 36.86 3.62
3088 4040 7.719633 TCATTAGTAGAAAACAGAGCTTTGGTT 59.280 33.333 9.34 5.32 0.00 3.67
3091 4043 5.885912 AGTAGAAAACAGAGCTTTGGTTCAA 59.114 36.000 8.15 0.00 0.00 2.69
3115 4067 1.204146 GGTCAGCCCATTAGTCCTGA 58.796 55.000 0.00 0.00 32.35 3.86
3118 4070 3.372025 GGTCAGCCCATTAGTCCTGATTT 60.372 47.826 0.00 0.00 36.78 2.17
3155 4107 0.916086 AATGTAGGCATTGGTCCCGA 59.084 50.000 0.00 0.00 43.12 5.14
3199 4151 2.600173 CCACGTGGGCCATTGGTT 60.600 61.111 27.57 0.03 0.00 3.67
3206 4158 1.911269 GGGCCATTGGTTCCGGTTT 60.911 57.895 4.39 0.00 0.00 3.27
3293 4245 2.282887 ATTGGTCCCGGTTGGTGC 60.283 61.111 0.00 0.00 34.77 5.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
210 211 5.589050 TGTGTGCATTCGAGAGTACTAGTAT 59.411 40.000 5.75 0.00 0.00 2.12
388 389 2.416431 GGTATTTGCCGTACTCTGACGT 60.416 50.000 0.00 0.00 41.31 4.34
437 438 3.403057 CCTGTTGCGTGTCGACCG 61.403 66.667 14.12 16.65 0.00 4.79
438 439 3.712881 GCCTGTTGCGTGTCGACC 61.713 66.667 14.12 3.43 0.00 4.79
439 440 2.943345 CTGCCTGTTGCGTGTCGAC 61.943 63.158 9.11 9.11 45.60 4.20
440 441 2.661537 CTGCCTGTTGCGTGTCGA 60.662 61.111 0.00 0.00 45.60 4.20
441 442 4.374702 GCTGCCTGTTGCGTGTCG 62.375 66.667 0.00 0.00 45.60 4.35
442 443 3.245948 CTGCTGCCTGTTGCGTGTC 62.246 63.158 0.00 0.00 45.60 3.67
443 444 2.658679 TACTGCTGCCTGTTGCGTGT 62.659 55.000 0.00 0.00 45.60 4.49
444 445 1.904852 CTACTGCTGCCTGTTGCGTG 61.905 60.000 0.00 0.00 45.60 5.34
445 446 1.669115 CTACTGCTGCCTGTTGCGT 60.669 57.895 0.00 0.00 45.60 5.24
446 447 1.374631 TCTACTGCTGCCTGTTGCG 60.375 57.895 0.00 0.00 45.60 4.85
447 448 1.301677 GGTCTACTGCTGCCTGTTGC 61.302 60.000 0.00 0.00 41.77 4.17
448 449 1.016130 CGGTCTACTGCTGCCTGTTG 61.016 60.000 0.00 0.00 0.00 3.33
449 450 1.293498 CGGTCTACTGCTGCCTGTT 59.707 57.895 0.00 0.00 0.00 3.16
450 451 2.650116 CCGGTCTACTGCTGCCTGT 61.650 63.158 0.00 0.00 0.00 4.00
451 452 2.185350 CCGGTCTACTGCTGCCTG 59.815 66.667 0.00 0.00 0.00 4.85
452 453 2.283966 ACCGGTCTACTGCTGCCT 60.284 61.111 0.00 0.00 0.00 4.75
453 454 2.184579 GACCGGTCTACTGCTGCC 59.815 66.667 27.64 0.00 0.00 4.85
454 455 2.202623 CGACCGGTCTACTGCTGC 60.203 66.667 30.92 3.41 0.00 5.25
455 456 2.202623 GCGACCGGTCTACTGCTG 60.203 66.667 30.92 15.29 0.00 4.41
456 457 3.812019 CGCGACCGGTCTACTGCT 61.812 66.667 30.92 0.00 0.00 4.24
477 478 1.919956 CTCAAAGCTGCGGCAAGGAG 61.920 60.000 21.93 17.80 41.70 3.69
478 479 1.968017 CTCAAAGCTGCGGCAAGGA 60.968 57.895 21.93 12.27 41.70 3.36
479 480 1.310933 ATCTCAAAGCTGCGGCAAGG 61.311 55.000 21.93 8.18 41.70 3.61
480 481 1.372582 TATCTCAAAGCTGCGGCAAG 58.627 50.000 21.93 11.30 41.70 4.01
481 482 1.468520 GTTATCTCAAAGCTGCGGCAA 59.531 47.619 21.93 0.00 41.70 4.52
482 483 1.086696 GTTATCTCAAAGCTGCGGCA 58.913 50.000 21.93 1.29 41.70 5.69
483 484 0.378610 GGTTATCTCAAAGCTGCGGC 59.621 55.000 10.33 10.33 39.06 6.53
484 485 1.936547 GAGGTTATCTCAAAGCTGCGG 59.063 52.381 0.00 0.00 42.02 5.69
485 486 1.590238 CGAGGTTATCTCAAAGCTGCG 59.410 52.381 0.00 0.00 42.55 5.18
486 487 1.328986 GCGAGGTTATCTCAAAGCTGC 59.671 52.381 0.00 0.00 42.55 5.25
487 488 2.606725 CTGCGAGGTTATCTCAAAGCTG 59.393 50.000 0.00 0.00 42.55 4.24
488 489 2.419297 CCTGCGAGGTTATCTCAAAGCT 60.419 50.000 0.00 0.00 42.55 3.74
489 490 1.936547 CCTGCGAGGTTATCTCAAAGC 59.063 52.381 0.00 0.00 42.55 3.51
517 518 4.447989 ATGCGCACTCGAGCTGCT 62.448 61.111 26.30 0.00 38.96 4.24
518 519 3.922893 GATGCGCACTCGAGCTGC 61.923 66.667 14.90 22.27 38.96 5.25
519 520 1.426816 ATTGATGCGCACTCGAGCTG 61.427 55.000 14.90 11.23 38.96 4.24
520 521 1.150567 GATTGATGCGCACTCGAGCT 61.151 55.000 14.90 0.00 38.96 4.09
521 522 1.275066 GATTGATGCGCACTCGAGC 59.725 57.895 14.90 10.80 38.10 5.03
522 523 0.299895 GTGATTGATGCGCACTCGAG 59.700 55.000 14.90 11.84 38.10 4.04
523 524 1.083806 GGTGATTGATGCGCACTCGA 61.084 55.000 14.90 12.17 38.10 4.04
524 525 1.349627 GGTGATTGATGCGCACTCG 59.650 57.895 14.90 0.00 39.07 4.18
525 526 0.097674 GTGGTGATTGATGCGCACTC 59.902 55.000 14.90 12.61 33.25 3.51
526 527 1.308069 GGTGGTGATTGATGCGCACT 61.308 55.000 14.90 1.12 33.25 4.40
527 528 1.137404 GGTGGTGATTGATGCGCAC 59.863 57.895 14.90 7.75 0.00 5.34
528 529 2.397754 CGGTGGTGATTGATGCGCA 61.398 57.895 14.96 14.96 0.00 6.09
529 530 1.439353 ATCGGTGGTGATTGATGCGC 61.439 55.000 0.00 0.00 0.00 6.09
530 531 1.794701 CTATCGGTGGTGATTGATGCG 59.205 52.381 0.00 0.00 0.00 4.73
531 532 1.532868 GCTATCGGTGGTGATTGATGC 59.467 52.381 0.00 0.00 0.00 3.91
532 533 2.146342 GGCTATCGGTGGTGATTGATG 58.854 52.381 0.00 0.00 0.00 3.07
533 534 1.270305 CGGCTATCGGTGGTGATTGAT 60.270 52.381 0.00 0.00 34.75 2.57
534 535 0.104120 CGGCTATCGGTGGTGATTGA 59.896 55.000 0.00 0.00 34.75 2.57
535 536 1.498865 GCGGCTATCGGTGGTGATTG 61.499 60.000 0.00 0.00 39.69 2.67
536 537 1.227556 GCGGCTATCGGTGGTGATT 60.228 57.895 0.00 0.00 39.69 2.57
537 538 1.966901 TTGCGGCTATCGGTGGTGAT 61.967 55.000 0.00 0.00 39.69 3.06
538 539 2.173758 TTTGCGGCTATCGGTGGTGA 62.174 55.000 0.00 0.00 39.69 4.02
539 540 1.095228 ATTTGCGGCTATCGGTGGTG 61.095 55.000 0.00 0.00 39.69 4.17
540 541 0.814010 GATTTGCGGCTATCGGTGGT 60.814 55.000 0.00 0.00 39.69 4.16
541 542 0.813610 TGATTTGCGGCTATCGGTGG 60.814 55.000 0.00 0.00 39.69 4.61
542 543 0.304705 GTGATTTGCGGCTATCGGTG 59.695 55.000 0.00 0.00 39.69 4.94
543 544 1.151777 CGTGATTTGCGGCTATCGGT 61.152 55.000 0.00 0.00 39.69 4.69
544 545 1.564622 CGTGATTTGCGGCTATCGG 59.435 57.895 0.00 0.00 39.69 4.18
545 546 1.564622 CCGTGATTTGCGGCTATCG 59.435 57.895 0.00 0.00 42.82 2.92
553 554 1.154413 CTGTGTCGCCGTGATTTGC 60.154 57.895 0.00 0.00 0.00 3.68
554 555 1.154413 GCTGTGTCGCCGTGATTTG 60.154 57.895 0.00 0.00 0.00 2.32
555 556 1.596752 TGCTGTGTCGCCGTGATTT 60.597 52.632 0.00 0.00 0.00 2.17
556 557 2.030412 TGCTGTGTCGCCGTGATT 59.970 55.556 0.00 0.00 0.00 2.57
557 558 2.738521 GTGCTGTGTCGCCGTGAT 60.739 61.111 0.00 0.00 0.00 3.06
558 559 4.961511 GGTGCTGTGTCGCCGTGA 62.962 66.667 0.00 0.00 0.00 4.35
564 565 1.695893 CCTATTGCGGTGCTGTGTCG 61.696 60.000 0.00 0.00 0.00 4.35
565 566 0.673644 ACCTATTGCGGTGCTGTGTC 60.674 55.000 0.00 0.00 35.52 3.67
566 567 0.250727 AACCTATTGCGGTGCTGTGT 60.251 50.000 0.00 0.00 37.36 3.72
567 568 0.168788 CAACCTATTGCGGTGCTGTG 59.831 55.000 0.00 0.00 37.36 3.66
568 569 0.036164 TCAACCTATTGCGGTGCTGT 59.964 50.000 0.00 0.00 37.36 4.40
569 570 1.164411 TTCAACCTATTGCGGTGCTG 58.836 50.000 0.00 0.00 37.36 4.41
570 571 1.904287 TTTCAACCTATTGCGGTGCT 58.096 45.000 0.00 0.00 37.36 4.40
571 572 2.163412 TGATTTCAACCTATTGCGGTGC 59.837 45.455 0.00 0.00 37.36 5.01
572 573 3.190327 TGTGATTTCAACCTATTGCGGTG 59.810 43.478 0.00 0.00 37.36 4.94
573 574 3.417101 TGTGATTTCAACCTATTGCGGT 58.583 40.909 0.00 0.00 39.48 5.68
574 575 3.731867 GCTGTGATTTCAACCTATTGCGG 60.732 47.826 0.00 0.00 35.63 5.69
575 576 3.119884 TGCTGTGATTTCAACCTATTGCG 60.120 43.478 0.00 0.00 35.63 4.85
576 577 4.439305 TGCTGTGATTTCAACCTATTGC 57.561 40.909 0.00 0.00 35.63 3.56
577 578 7.712264 TTTTTGCTGTGATTTCAACCTATTG 57.288 32.000 0.00 0.00 37.14 1.90
598 599 6.207614 GGAGCAGGTTAATCTTCTCTGTTTTT 59.792 38.462 13.98 0.00 0.00 1.94
599 600 5.707764 GGAGCAGGTTAATCTTCTCTGTTTT 59.292 40.000 13.98 0.00 0.00 2.43
600 601 5.249420 GGAGCAGGTTAATCTTCTCTGTTT 58.751 41.667 13.98 0.00 0.00 2.83
601 602 4.621747 CGGAGCAGGTTAATCTTCTCTGTT 60.622 45.833 14.16 0.00 0.00 3.16
602 603 3.118956 CGGAGCAGGTTAATCTTCTCTGT 60.119 47.826 14.16 0.00 0.00 3.41
603 604 3.131223 TCGGAGCAGGTTAATCTTCTCTG 59.869 47.826 15.76 15.76 0.00 3.35
604 605 3.366396 TCGGAGCAGGTTAATCTTCTCT 58.634 45.455 13.98 0.00 0.00 3.10
605 606 3.802948 TCGGAGCAGGTTAATCTTCTC 57.197 47.619 6.83 6.83 0.00 2.87
606 607 3.742640 GCATCGGAGCAGGTTAATCTTCT 60.743 47.826 0.00 0.00 0.00 2.85
607 608 2.545946 GCATCGGAGCAGGTTAATCTTC 59.454 50.000 0.00 0.00 0.00 2.87
608 609 2.565841 GCATCGGAGCAGGTTAATCTT 58.434 47.619 0.00 0.00 0.00 2.40
609 610 1.202698 GGCATCGGAGCAGGTTAATCT 60.203 52.381 2.61 0.00 35.83 2.40
610 611 1.230324 GGCATCGGAGCAGGTTAATC 58.770 55.000 2.61 0.00 35.83 1.75
611 612 0.546122 TGGCATCGGAGCAGGTTAAT 59.454 50.000 2.61 0.00 35.83 1.40
612 613 0.546122 ATGGCATCGGAGCAGGTTAA 59.454 50.000 0.00 0.00 35.83 2.01
613 614 0.179048 CATGGCATCGGAGCAGGTTA 60.179 55.000 0.00 0.00 35.83 2.85
614 615 1.452651 CATGGCATCGGAGCAGGTT 60.453 57.895 0.00 0.00 35.83 3.50
615 616 2.191375 CATGGCATCGGAGCAGGT 59.809 61.111 0.00 0.00 35.83 4.00
616 617 1.452651 AACATGGCATCGGAGCAGG 60.453 57.895 0.00 0.00 35.83 4.85
617 618 0.745486 TCAACATGGCATCGGAGCAG 60.745 55.000 0.00 0.00 35.83 4.24
618 619 0.322366 TTCAACATGGCATCGGAGCA 60.322 50.000 0.00 0.00 35.83 4.26
619 620 0.810648 TTTCAACATGGCATCGGAGC 59.189 50.000 0.00 0.00 0.00 4.70
620 621 3.129113 TGATTTTCAACATGGCATCGGAG 59.871 43.478 0.00 0.00 0.00 4.63
621 622 3.087781 TGATTTTCAACATGGCATCGGA 58.912 40.909 0.00 0.00 0.00 4.55
622 623 3.507103 TGATTTTCAACATGGCATCGG 57.493 42.857 0.00 0.00 0.00 4.18
623 624 6.440436 TCATATGATTTTCAACATGGCATCG 58.560 36.000 0.00 0.00 0.00 3.84
624 625 7.654568 TCTCATATGATTTTCAACATGGCATC 58.345 34.615 5.72 0.00 0.00 3.91
625 626 7.591421 TCTCATATGATTTTCAACATGGCAT 57.409 32.000 5.72 0.00 0.00 4.40
626 627 7.591421 ATCTCATATGATTTTCAACATGGCA 57.409 32.000 5.72 0.00 0.00 4.92
627 628 8.761497 CAAATCTCATATGATTTTCAACATGGC 58.239 33.333 5.72 0.00 42.63 4.40
639 640 8.784994 GCTCAAATCACTCAAATCTCATATGAT 58.215 33.333 5.72 0.00 0.00 2.45
640 641 7.991460 AGCTCAAATCACTCAAATCTCATATGA 59.009 33.333 5.07 5.07 0.00 2.15
641 642 8.155821 AGCTCAAATCACTCAAATCTCATATG 57.844 34.615 0.00 0.00 0.00 1.78
642 643 9.491675 CTAGCTCAAATCACTCAAATCTCATAT 57.508 33.333 0.00 0.00 0.00 1.78
643 644 7.930325 CCTAGCTCAAATCACTCAAATCTCATA 59.070 37.037 0.00 0.00 0.00 2.15
644 645 6.766944 CCTAGCTCAAATCACTCAAATCTCAT 59.233 38.462 0.00 0.00 0.00 2.90
645 646 6.111382 CCTAGCTCAAATCACTCAAATCTCA 58.889 40.000 0.00 0.00 0.00 3.27
646 647 5.526846 CCCTAGCTCAAATCACTCAAATCTC 59.473 44.000 0.00 0.00 0.00 2.75
647 648 5.190528 TCCCTAGCTCAAATCACTCAAATCT 59.809 40.000 0.00 0.00 0.00 2.40
648 649 5.431765 TCCCTAGCTCAAATCACTCAAATC 58.568 41.667 0.00 0.00 0.00 2.17
649 650 5.441718 TCCCTAGCTCAAATCACTCAAAT 57.558 39.130 0.00 0.00 0.00 2.32
650 651 4.908601 TCCCTAGCTCAAATCACTCAAA 57.091 40.909 0.00 0.00 0.00 2.69
651 652 5.441718 AATCCCTAGCTCAAATCACTCAA 57.558 39.130 0.00 0.00 0.00 3.02
652 653 5.045651 TCAAATCCCTAGCTCAAATCACTCA 60.046 40.000 0.00 0.00 0.00 3.41
653 654 5.431765 TCAAATCCCTAGCTCAAATCACTC 58.568 41.667 0.00 0.00 0.00 3.51
654 655 5.435291 CTCAAATCCCTAGCTCAAATCACT 58.565 41.667 0.00 0.00 0.00 3.41
655 656 4.578105 CCTCAAATCCCTAGCTCAAATCAC 59.422 45.833 0.00 0.00 0.00 3.06
656 657 4.385643 CCCTCAAATCCCTAGCTCAAATCA 60.386 45.833 0.00 0.00 0.00 2.57
657 658 4.140536 CCCTCAAATCCCTAGCTCAAATC 58.859 47.826 0.00 0.00 0.00 2.17
658 659 3.788142 TCCCTCAAATCCCTAGCTCAAAT 59.212 43.478 0.00 0.00 0.00 2.32
659 660 3.189606 TCCCTCAAATCCCTAGCTCAAA 58.810 45.455 0.00 0.00 0.00 2.69
660 661 2.774234 CTCCCTCAAATCCCTAGCTCAA 59.226 50.000 0.00 0.00 0.00 3.02
661 662 2.402564 CTCCCTCAAATCCCTAGCTCA 58.597 52.381 0.00 0.00 0.00 4.26
662 663 1.071542 GCTCCCTCAAATCCCTAGCTC 59.928 57.143 0.00 0.00 0.00 4.09
663 664 1.135960 GCTCCCTCAAATCCCTAGCT 58.864 55.000 0.00 0.00 0.00 3.32
664 665 0.839946 TGCTCCCTCAAATCCCTAGC 59.160 55.000 0.00 0.00 0.00 3.42
665 666 2.707791 TCATGCTCCCTCAAATCCCTAG 59.292 50.000 0.00 0.00 0.00 3.02
666 667 2.775418 TCATGCTCCCTCAAATCCCTA 58.225 47.619 0.00 0.00 0.00 3.53
667 668 1.600058 TCATGCTCCCTCAAATCCCT 58.400 50.000 0.00 0.00 0.00 4.20
668 669 2.092212 TCTTCATGCTCCCTCAAATCCC 60.092 50.000 0.00 0.00 0.00 3.85
669 670 3.287867 TCTTCATGCTCCCTCAAATCC 57.712 47.619 0.00 0.00 0.00 3.01
670 671 4.521146 TCTTCTTCATGCTCCCTCAAATC 58.479 43.478 0.00 0.00 0.00 2.17
671 672 4.525024 CTCTTCTTCATGCTCCCTCAAAT 58.475 43.478 0.00 0.00 0.00 2.32
672 673 3.307975 CCTCTTCTTCATGCTCCCTCAAA 60.308 47.826 0.00 0.00 0.00 2.69
673 674 2.238144 CCTCTTCTTCATGCTCCCTCAA 59.762 50.000 0.00 0.00 0.00 3.02
674 675 1.836166 CCTCTTCTTCATGCTCCCTCA 59.164 52.381 0.00 0.00 0.00 3.86
675 676 2.114616 TCCTCTTCTTCATGCTCCCTC 58.885 52.381 0.00 0.00 0.00 4.30
676 677 2.260639 TCCTCTTCTTCATGCTCCCT 57.739 50.000 0.00 0.00 0.00 4.20
677 678 3.574354 AATCCTCTTCTTCATGCTCCC 57.426 47.619 0.00 0.00 0.00 4.30
678 679 3.631227 CCAAATCCTCTTCTTCATGCTCC 59.369 47.826 0.00 0.00 0.00 4.70
679 680 3.631227 CCCAAATCCTCTTCTTCATGCTC 59.369 47.826 0.00 0.00 0.00 4.26
680 681 3.626729 CCCCAAATCCTCTTCTTCATGCT 60.627 47.826 0.00 0.00 0.00 3.79
681 682 2.692041 CCCCAAATCCTCTTCTTCATGC 59.308 50.000 0.00 0.00 0.00 4.06
682 683 4.240881 TCCCCAAATCCTCTTCTTCATG 57.759 45.455 0.00 0.00 0.00 3.07
683 684 4.953781 TTCCCCAAATCCTCTTCTTCAT 57.046 40.909 0.00 0.00 0.00 2.57
684 685 4.106341 AGTTTCCCCAAATCCTCTTCTTCA 59.894 41.667 0.00 0.00 0.00 3.02
685 686 4.667573 AGTTTCCCCAAATCCTCTTCTTC 58.332 43.478 0.00 0.00 0.00 2.87
686 687 4.355287 AGAGTTTCCCCAAATCCTCTTCTT 59.645 41.667 0.00 0.00 0.00 2.52
687 688 3.919554 AGAGTTTCCCCAAATCCTCTTCT 59.080 43.478 0.00 0.00 0.00 2.85
688 689 4.013050 CAGAGTTTCCCCAAATCCTCTTC 58.987 47.826 0.00 0.00 0.00 2.87
689 690 3.245407 CCAGAGTTTCCCCAAATCCTCTT 60.245 47.826 0.00 0.00 0.00 2.85
690 691 2.310052 CCAGAGTTTCCCCAAATCCTCT 59.690 50.000 0.00 0.00 0.00 3.69
691 692 2.308866 TCCAGAGTTTCCCCAAATCCTC 59.691 50.000 0.00 0.00 0.00 3.71
692 693 2.358258 TCCAGAGTTTCCCCAAATCCT 58.642 47.619 0.00 0.00 0.00 3.24
693 694 2.899303 TCCAGAGTTTCCCCAAATCC 57.101 50.000 0.00 0.00 0.00 3.01
694 695 2.945668 CGATCCAGAGTTTCCCCAAATC 59.054 50.000 0.00 0.00 0.00 2.17
695 696 2.308866 ACGATCCAGAGTTTCCCCAAAT 59.691 45.455 0.00 0.00 0.00 2.32
696 697 1.702957 ACGATCCAGAGTTTCCCCAAA 59.297 47.619 0.00 0.00 0.00 3.28
697 698 1.358152 ACGATCCAGAGTTTCCCCAA 58.642 50.000 0.00 0.00 0.00 4.12
698 699 1.278127 GAACGATCCAGAGTTTCCCCA 59.722 52.381 0.00 0.00 0.00 4.96
699 700 1.407025 GGAACGATCCAGAGTTTCCCC 60.407 57.143 6.88 0.00 45.79 4.81
700 701 2.025589 GGAACGATCCAGAGTTTCCC 57.974 55.000 6.88 0.00 45.79 3.97
713 714 1.189524 AAGGGATCGGTGTGGAACGA 61.190 55.000 0.00 0.00 42.39 3.85
714 715 0.739813 GAAGGGATCGGTGTGGAACG 60.740 60.000 0.00 0.00 42.39 3.95
715 716 0.613777 AGAAGGGATCGGTGTGGAAC 59.386 55.000 0.00 0.00 37.35 3.62
716 717 0.902531 GAGAAGGGATCGGTGTGGAA 59.097 55.000 0.00 0.00 0.00 3.53
717 718 0.041238 AGAGAAGGGATCGGTGTGGA 59.959 55.000 0.00 0.00 0.00 4.02
718 719 0.461961 GAGAGAAGGGATCGGTGTGG 59.538 60.000 0.00 0.00 0.00 4.17
719 720 1.135915 CAGAGAGAAGGGATCGGTGTG 59.864 57.143 0.00 0.00 0.00 3.82
720 721 1.272760 ACAGAGAGAAGGGATCGGTGT 60.273 52.381 0.00 0.00 0.00 4.16
721 722 1.479709 ACAGAGAGAAGGGATCGGTG 58.520 55.000 0.00 0.00 0.00 4.94
722 723 2.242708 AGTACAGAGAGAAGGGATCGGT 59.757 50.000 0.00 0.00 0.00 4.69
723 724 2.938838 AGTACAGAGAGAAGGGATCGG 58.061 52.381 0.00 0.00 0.00 4.18
724 725 6.642707 AATAAGTACAGAGAGAAGGGATCG 57.357 41.667 0.00 0.00 0.00 3.69
754 755 8.127954 GGGACTAAAACGTAAATTGTACAAACA 58.872 33.333 13.23 0.00 0.00 2.83
755 756 8.344831 AGGGACTAAAACGTAAATTGTACAAAC 58.655 33.333 13.23 5.61 36.02 2.93
756 757 8.449251 AGGGACTAAAACGTAAATTGTACAAA 57.551 30.769 13.23 0.00 36.02 2.83
767 768 8.397612 AGGTGACTTCTTAGGGACTAAAACGTA 61.398 40.741 0.00 0.00 45.60 3.57
768 769 7.648810 AGGTGACTTCTTAGGGACTAAAACGT 61.649 42.308 0.00 0.00 45.60 3.99
769 770 5.279356 AGGTGACTTCTTAGGGACTAAAACG 60.279 44.000 0.00 0.00 45.60 3.60
770 771 6.111669 AGGTGACTTCTTAGGGACTAAAAC 57.888 41.667 0.00 0.00 45.60 2.43
771 772 7.860649 TTAGGTGACTTCTTAGGGACTAAAA 57.139 36.000 0.00 0.00 46.43 1.52
772 773 8.445361 AATTAGGTGACTTCTTAGGGACTAAA 57.555 34.615 0.00 0.00 46.43 1.85
773 774 8.975295 GTAATTAGGTGACTTCTTAGGGACTAA 58.025 37.037 0.00 0.00 45.58 2.24
774 775 8.117956 TGTAATTAGGTGACTTCTTAGGGACTA 58.882 37.037 0.00 0.00 43.67 2.59
775 776 6.958192 TGTAATTAGGTGACTTCTTAGGGACT 59.042 38.462 0.00 0.00 43.67 3.85
776 777 7.179076 TGTAATTAGGTGACTTCTTAGGGAC 57.821 40.000 0.00 0.00 43.67 4.46
777 778 7.801893 TTGTAATTAGGTGACTTCTTAGGGA 57.198 36.000 0.00 0.00 43.67 4.20
796 797 8.608317 CGATGTGTTGGTGTATGAATATTGTAA 58.392 33.333 0.00 0.00 0.00 2.41
797 798 7.766738 ACGATGTGTTGGTGTATGAATATTGTA 59.233 33.333 0.00 0.00 0.00 2.41
798 799 6.597672 ACGATGTGTTGGTGTATGAATATTGT 59.402 34.615 0.00 0.00 0.00 2.71
799 800 7.015226 ACGATGTGTTGGTGTATGAATATTG 57.985 36.000 0.00 0.00 0.00 1.90
800 801 8.725405 TTACGATGTGTTGGTGTATGAATATT 57.275 30.769 0.00 0.00 0.00 1.28
801 802 7.042051 GCTTACGATGTGTTGGTGTATGAATAT 60.042 37.037 0.00 0.00 0.00 1.28
802 803 6.256975 GCTTACGATGTGTTGGTGTATGAATA 59.743 38.462 0.00 0.00 0.00 1.75
803 804 5.064707 GCTTACGATGTGTTGGTGTATGAAT 59.935 40.000 0.00 0.00 0.00 2.57
804 805 4.390603 GCTTACGATGTGTTGGTGTATGAA 59.609 41.667 0.00 0.00 0.00 2.57
805 806 3.930229 GCTTACGATGTGTTGGTGTATGA 59.070 43.478 0.00 0.00 0.00 2.15
806 807 3.932710 AGCTTACGATGTGTTGGTGTATG 59.067 43.478 0.00 0.00 0.00 2.39
807 808 4.202245 AGCTTACGATGTGTTGGTGTAT 57.798 40.909 0.00 0.00 0.00 2.29
808 809 3.671008 AGCTTACGATGTGTTGGTGTA 57.329 42.857 0.00 0.00 0.00 2.90
809 810 2.543777 AGCTTACGATGTGTTGGTGT 57.456 45.000 0.00 0.00 0.00 4.16
810 811 4.870426 AGATTAGCTTACGATGTGTTGGTG 59.130 41.667 0.00 0.00 0.00 4.17
811 812 5.086104 AGATTAGCTTACGATGTGTTGGT 57.914 39.130 0.00 0.00 0.00 3.67
812 813 5.352284 AGAGATTAGCTTACGATGTGTTGG 58.648 41.667 0.00 0.00 0.00 3.77
813 814 5.172232 CGAGAGATTAGCTTACGATGTGTTG 59.828 44.000 0.00 0.00 0.00 3.33
814 815 5.066117 TCGAGAGATTAGCTTACGATGTGTT 59.934 40.000 0.00 0.00 32.61 3.32
815 816 4.575236 TCGAGAGATTAGCTTACGATGTGT 59.425 41.667 0.00 0.00 32.61 3.72
816 817 5.096954 TCGAGAGATTAGCTTACGATGTG 57.903 43.478 0.00 0.00 32.61 3.21
817 818 4.319911 GCTCGAGAGATTAGCTTACGATGT 60.320 45.833 18.75 0.00 40.84 3.06
818 819 4.155449 GCTCGAGAGATTAGCTTACGATG 58.845 47.826 18.75 0.00 40.84 3.84
819 820 3.120477 CGCTCGAGAGATTAGCTTACGAT 60.120 47.826 18.75 0.00 40.84 3.73
820 821 2.221286 CGCTCGAGAGATTAGCTTACGA 59.779 50.000 18.75 0.00 40.84 3.43
821 822 2.221286 TCGCTCGAGAGATTAGCTTACG 59.779 50.000 18.75 5.45 40.84 3.18
822 823 3.805823 CTCGCTCGAGAGATTAGCTTAC 58.194 50.000 19.49 0.00 44.53 2.34
823 824 2.224549 GCTCGCTCGAGAGATTAGCTTA 59.775 50.000 19.49 0.00 44.53 3.09
824 825 1.001815 GCTCGCTCGAGAGATTAGCTT 60.002 52.381 19.49 0.00 44.53 3.74
825 826 0.591170 GCTCGCTCGAGAGATTAGCT 59.409 55.000 19.49 0.00 44.53 3.32
826 827 0.724453 CGCTCGCTCGAGAGATTAGC 60.724 60.000 19.49 17.33 43.22 3.09
827 828 0.862490 TCGCTCGCTCGAGAGATTAG 59.138 55.000 19.49 13.10 44.00 1.73
828 829 2.987752 TCGCTCGCTCGAGAGATTA 58.012 52.632 19.49 5.33 44.00 1.75
829 830 3.814991 TCGCTCGCTCGAGAGATT 58.185 55.556 19.49 0.00 44.00 2.40
835 836 1.545759 CATTTTACTCGCTCGCTCGA 58.454 50.000 0.00 0.00 36.94 4.04
836 837 0.572590 CCATTTTACTCGCTCGCTCG 59.427 55.000 0.00 0.00 0.00 5.03
837 838 0.931005 CCCATTTTACTCGCTCGCTC 59.069 55.000 0.00 0.00 0.00 5.03
838 839 0.535335 TCCCATTTTACTCGCTCGCT 59.465 50.000 0.00 0.00 0.00 4.93
839 840 1.583054 ATCCCATTTTACTCGCTCGC 58.417 50.000 0.00 0.00 0.00 5.03
840 841 5.924475 AATTATCCCATTTTACTCGCTCG 57.076 39.130 0.00 0.00 0.00 5.03
841 842 7.964604 ACTAATTATCCCATTTTACTCGCTC 57.035 36.000 0.00 0.00 0.00 5.03
842 843 9.490379 CTAACTAATTATCCCATTTTACTCGCT 57.510 33.333 0.00 0.00 0.00 4.93
843 844 9.485206 TCTAACTAATTATCCCATTTTACTCGC 57.515 33.333 0.00 0.00 0.00 5.03
866 867 9.542462 CGATTAGGATAAGGATTGTTTGTTCTA 57.458 33.333 0.00 0.00 0.00 2.10
867 868 8.265055 TCGATTAGGATAAGGATTGTTTGTTCT 58.735 33.333 0.00 0.00 0.00 3.01
868 869 8.433421 TCGATTAGGATAAGGATTGTTTGTTC 57.567 34.615 0.00 0.00 0.00 3.18
869 870 8.674607 GTTCGATTAGGATAAGGATTGTTTGTT 58.325 33.333 0.00 0.00 0.00 2.83
870 871 7.011109 CGTTCGATTAGGATAAGGATTGTTTGT 59.989 37.037 0.00 0.00 0.00 2.83
871 872 7.223971 TCGTTCGATTAGGATAAGGATTGTTTG 59.776 37.037 0.00 0.00 0.00 2.93
872 873 7.270047 TCGTTCGATTAGGATAAGGATTGTTT 58.730 34.615 0.00 0.00 0.00 2.83
873 874 6.812998 TCGTTCGATTAGGATAAGGATTGTT 58.187 36.000 0.00 0.00 0.00 2.83
874 875 6.401047 TCGTTCGATTAGGATAAGGATTGT 57.599 37.500 0.00 0.00 0.00 2.71
875 876 6.145696 GGTTCGTTCGATTAGGATAAGGATTG 59.854 42.308 0.00 0.00 0.00 2.67
876 877 6.183360 TGGTTCGTTCGATTAGGATAAGGATT 60.183 38.462 0.00 0.00 0.00 3.01
877 878 5.303589 TGGTTCGTTCGATTAGGATAAGGAT 59.696 40.000 0.00 0.00 0.00 3.24
878 879 4.646040 TGGTTCGTTCGATTAGGATAAGGA 59.354 41.667 0.00 0.00 0.00 3.36
879 880 4.940463 TGGTTCGTTCGATTAGGATAAGG 58.060 43.478 0.00 0.00 0.00 2.69
880 881 4.982916 CCTGGTTCGTTCGATTAGGATAAG 59.017 45.833 11.59 0.00 0.00 1.73
881 882 4.738541 GCCTGGTTCGTTCGATTAGGATAA 60.739 45.833 17.44 0.00 0.00 1.75
882 883 3.243636 GCCTGGTTCGTTCGATTAGGATA 60.244 47.826 17.44 0.00 0.00 2.59
883 884 2.483188 GCCTGGTTCGTTCGATTAGGAT 60.483 50.000 17.44 0.00 0.00 3.24
884 885 1.134907 GCCTGGTTCGTTCGATTAGGA 60.135 52.381 17.44 0.00 0.00 2.94
885 886 1.287425 GCCTGGTTCGTTCGATTAGG 58.713 55.000 12.26 12.26 0.00 2.69
886 887 1.927174 CTGCCTGGTTCGTTCGATTAG 59.073 52.381 0.00 0.00 0.00 1.73
887 888 1.274167 ACTGCCTGGTTCGTTCGATTA 59.726 47.619 0.00 0.00 0.00 1.75
888 889 0.034896 ACTGCCTGGTTCGTTCGATT 59.965 50.000 0.00 0.00 0.00 3.34
889 890 0.389948 GACTGCCTGGTTCGTTCGAT 60.390 55.000 0.00 0.00 0.00 3.59
890 891 1.006571 GACTGCCTGGTTCGTTCGA 60.007 57.895 0.00 0.00 0.00 3.71
891 892 1.284982 CTGACTGCCTGGTTCGTTCG 61.285 60.000 0.00 0.00 0.00 3.95
892 893 0.951040 CCTGACTGCCTGGTTCGTTC 60.951 60.000 0.00 0.00 0.00 3.95
893 894 1.071471 CCTGACTGCCTGGTTCGTT 59.929 57.895 0.00 0.00 0.00 3.85
894 895 2.743718 CCTGACTGCCTGGTTCGT 59.256 61.111 0.00 0.00 0.00 3.85
895 896 2.743928 GCCTGACTGCCTGGTTCG 60.744 66.667 0.00 0.00 36.37 3.95
896 897 1.968540 GTGCCTGACTGCCTGGTTC 60.969 63.158 0.00 0.00 36.37 3.62
897 898 2.113986 GTGCCTGACTGCCTGGTT 59.886 61.111 0.00 0.00 36.37 3.67
898 899 3.958860 GGTGCCTGACTGCCTGGT 61.959 66.667 0.00 0.00 36.37 4.00
899 900 3.914579 CTGGTGCCTGACTGCCTGG 62.915 68.421 0.00 0.00 36.99 4.45
900 901 2.359602 CTGGTGCCTGACTGCCTG 60.360 66.667 0.00 0.00 0.00 4.85
901 902 4.341783 GCTGGTGCCTGACTGCCT 62.342 66.667 0.00 0.00 0.00 4.75
902 903 3.933048 ATGCTGGTGCCTGACTGCC 62.933 63.158 0.00 0.00 38.71 4.85
903 904 2.360852 ATGCTGGTGCCTGACTGC 60.361 61.111 0.00 0.00 38.71 4.40
904 905 0.607217 TTGATGCTGGTGCCTGACTG 60.607 55.000 0.00 0.00 38.71 3.51
905 906 0.607489 GTTGATGCTGGTGCCTGACT 60.607 55.000 0.00 0.00 38.71 3.41
906 907 0.607489 AGTTGATGCTGGTGCCTGAC 60.607 55.000 0.00 0.00 38.71 3.51
907 908 0.983467 TAGTTGATGCTGGTGCCTGA 59.017 50.000 0.00 0.00 38.71 3.86
908 909 1.065926 TCTAGTTGATGCTGGTGCCTG 60.066 52.381 0.00 0.00 38.71 4.85
909 910 1.279496 TCTAGTTGATGCTGGTGCCT 58.721 50.000 0.00 0.00 38.71 4.75
910 911 2.113860 TTCTAGTTGATGCTGGTGCC 57.886 50.000 0.00 0.00 38.71 5.01
911 912 4.260375 CGTATTTCTAGTTGATGCTGGTGC 60.260 45.833 0.00 0.00 40.20 5.01
912 913 4.260375 GCGTATTTCTAGTTGATGCTGGTG 60.260 45.833 0.00 0.00 0.00 4.17
913 914 3.871594 GCGTATTTCTAGTTGATGCTGGT 59.128 43.478 0.00 0.00 0.00 4.00
914 915 3.871006 TGCGTATTTCTAGTTGATGCTGG 59.129 43.478 0.00 0.00 0.00 4.85
915 916 4.260375 GGTGCGTATTTCTAGTTGATGCTG 60.260 45.833 0.00 0.00 0.00 4.41
916 917 3.871594 GGTGCGTATTTCTAGTTGATGCT 59.128 43.478 0.00 0.00 0.00 3.79
917 918 3.002348 GGGTGCGTATTTCTAGTTGATGC 59.998 47.826 0.00 0.00 0.00 3.91
918 919 4.442706 AGGGTGCGTATTTCTAGTTGATG 58.557 43.478 0.00 0.00 0.00 3.07
919 920 4.755266 AGGGTGCGTATTTCTAGTTGAT 57.245 40.909 0.00 0.00 0.00 2.57
920 921 4.501071 GAAGGGTGCGTATTTCTAGTTGA 58.499 43.478 0.00 0.00 0.00 3.18
921 922 3.306166 CGAAGGGTGCGTATTTCTAGTTG 59.694 47.826 0.00 0.00 0.00 3.16
922 923 3.518590 CGAAGGGTGCGTATTTCTAGTT 58.481 45.455 0.00 0.00 0.00 2.24
923 924 3.160777 CGAAGGGTGCGTATTTCTAGT 57.839 47.619 0.00 0.00 0.00 2.57
939 940 2.978018 GAAAAGGTGGCGGCCGAAG 61.978 63.158 33.48 0.00 0.00 3.79
940 941 2.981350 GAAAAGGTGGCGGCCGAA 60.981 61.111 33.48 14.13 0.00 4.30
943 944 3.062466 GAGGAAAAGGTGGCGGCC 61.062 66.667 13.32 13.32 0.00 6.13
944 945 3.062466 GGAGGAAAAGGTGGCGGC 61.062 66.667 0.00 0.00 0.00 6.53
945 946 1.377333 GAGGAGGAAAAGGTGGCGG 60.377 63.158 0.00 0.00 0.00 6.13
946 947 0.391793 GAGAGGAGGAAAAGGTGGCG 60.392 60.000 0.00 0.00 0.00 5.69
947 948 0.034960 GGAGAGGAGGAAAAGGTGGC 60.035 60.000 0.00 0.00 0.00 5.01
948 949 0.621082 GGGAGAGGAGGAAAAGGTGG 59.379 60.000 0.00 0.00 0.00 4.61
949 950 1.003696 GTGGGAGAGGAGGAAAAGGTG 59.996 57.143 0.00 0.00 0.00 4.00
950 951 1.363246 GTGGGAGAGGAGGAAAAGGT 58.637 55.000 0.00 0.00 0.00 3.50
951 952 0.250513 CGTGGGAGAGGAGGAAAAGG 59.749 60.000 0.00 0.00 0.00 3.11
952 953 0.391793 GCGTGGGAGAGGAGGAAAAG 60.392 60.000 0.00 0.00 0.00 2.27
953 954 1.677552 GCGTGGGAGAGGAGGAAAA 59.322 57.895 0.00 0.00 0.00 2.29
954 955 2.291043 GGCGTGGGAGAGGAGGAAA 61.291 63.158 0.00 0.00 0.00 3.13
955 956 2.683933 GGCGTGGGAGAGGAGGAA 60.684 66.667 0.00 0.00 0.00 3.36
956 957 3.539593 TTGGCGTGGGAGAGGAGGA 62.540 63.158 0.00 0.00 0.00 3.71
957 958 3.003173 TTGGCGTGGGAGAGGAGG 61.003 66.667 0.00 0.00 0.00 4.30
958 959 1.544825 TTCTTGGCGTGGGAGAGGAG 61.545 60.000 0.00 0.00 0.00 3.69
959 960 1.535444 TTCTTGGCGTGGGAGAGGA 60.535 57.895 0.00 0.00 0.00 3.71
960 961 1.376037 GTTCTTGGCGTGGGAGAGG 60.376 63.158 0.00 0.00 0.00 3.69
961 962 1.738099 CGTTCTTGGCGTGGGAGAG 60.738 63.158 0.00 0.00 0.00 3.20
962 963 2.035237 AACGTTCTTGGCGTGGGAGA 62.035 55.000 0.00 0.00 42.10 3.71
963 964 1.164041 AAACGTTCTTGGCGTGGGAG 61.164 55.000 0.00 0.00 42.10 4.30
964 965 0.748729 AAAACGTTCTTGGCGTGGGA 60.749 50.000 0.00 0.00 42.10 4.37
965 966 0.101579 AAAAACGTTCTTGGCGTGGG 59.898 50.000 0.00 0.00 42.10 4.61
966 967 1.064952 AGAAAAACGTTCTTGGCGTGG 59.935 47.619 0.00 0.00 42.10 4.94
967 968 2.223157 TGAGAAAAACGTTCTTGGCGTG 60.223 45.455 0.00 0.00 42.10 5.34
968 969 2.011222 TGAGAAAAACGTTCTTGGCGT 58.989 42.857 0.00 0.00 45.07 5.68
969 970 2.748461 TGAGAAAAACGTTCTTGGCG 57.252 45.000 0.00 0.00 0.00 5.69
970 971 3.253432 AGGATGAGAAAAACGTTCTTGGC 59.747 43.478 0.00 0.00 0.00 4.52
971 972 4.515191 TCAGGATGAGAAAAACGTTCTTGG 59.485 41.667 0.00 0.00 42.56 3.61
972 973 5.673337 TCAGGATGAGAAAAACGTTCTTG 57.327 39.130 0.00 0.00 42.56 3.02
979 980 8.051583 CACCATTGTGATCAGGATGAGAAAAAC 61.052 40.741 16.18 0.00 42.67 2.43
980 981 6.071784 CACCATTGTGATCAGGATGAGAAAAA 60.072 38.462 16.18 0.00 42.67 1.94
981 982 5.416639 CACCATTGTGATCAGGATGAGAAAA 59.583 40.000 16.18 0.00 42.67 2.29
982 983 4.945543 CACCATTGTGATCAGGATGAGAAA 59.054 41.667 16.18 0.00 42.67 2.52
983 984 4.520179 CACCATTGTGATCAGGATGAGAA 58.480 43.478 16.18 0.00 42.67 2.87
995 996 2.594013 TGCGCTGCACCATTGTGA 60.594 55.556 9.73 0.00 45.76 3.58
1026 1027 0.694771 ACAGGTCCATGCACATGACT 59.305 50.000 8.70 4.72 41.20 3.41
1071 1072 4.783621 GAGCCACCATCGCTGCCA 62.784 66.667 0.00 0.00 36.48 4.92
1080 1081 4.720127 TCGTAGTACGAGCCACCA 57.280 55.556 21.10 0.00 46.73 4.17
1149 1244 2.359230 GCGGAGAGGTGCAGCTTT 60.359 61.111 21.18 15.15 0.00 3.51
1200 1295 3.307906 ACGTAGGCGACCTTGGCA 61.308 61.111 3.71 0.00 42.00 4.92
1339 1434 3.083997 GGCAGTGGATCCCTCGGT 61.084 66.667 9.90 0.00 0.00 4.69
1404 1505 1.600916 GAAGTTGGTGAAGCGGCCT 60.601 57.895 0.00 0.00 0.00 5.19
1509 1610 1.112113 GCTGGGTGGAGACGATCTTA 58.888 55.000 0.00 0.00 0.00 2.10
1614 1715 3.387091 TCCAGCGGCGCCTCTAAA 61.387 61.111 30.40 10.46 0.00 1.85
1817 1918 4.854924 TGCCATCGATGCCCACGG 62.855 66.667 20.25 6.36 0.00 4.94
1990 2105 9.339850 GTCCATAGTCTAGTTCTTGTATGTAGA 57.660 37.037 0.00 0.00 0.00 2.59
2003 2118 9.127277 GATCAAGAGTTTAGTCCATAGTCTAGT 57.873 37.037 0.00 0.00 0.00 2.57
2010 2125 6.577103 CAGCAGATCAAGAGTTTAGTCCATA 58.423 40.000 0.00 0.00 0.00 2.74
2011 2126 5.426504 CAGCAGATCAAGAGTTTAGTCCAT 58.573 41.667 0.00 0.00 0.00 3.41
2029 2144 1.003116 GCCGAACAGATAATGCAGCAG 60.003 52.381 0.00 0.00 0.00 4.24
2033 2148 6.207928 CAAAATATGCCGAACAGATAATGCA 58.792 36.000 0.00 0.00 27.62 3.96
2034 2149 5.630680 CCAAAATATGCCGAACAGATAATGC 59.369 40.000 0.00 0.00 27.62 3.56
2035 2150 6.738114 ACCAAAATATGCCGAACAGATAATG 58.262 36.000 0.00 0.00 27.62 1.90
2479 2639 4.177165 TCGTTTTAGTACCTCGCAATGA 57.823 40.909 0.00 0.00 0.00 2.57
2486 2646 5.228665 ACAAGAGCTTCGTTTTAGTACCTC 58.771 41.667 0.00 0.00 0.00 3.85
2551 2721 8.815912 AGCATGTTTTTATTTGTAAATCTCCCT 58.184 29.630 0.00 0.00 0.00 4.20
2750 3695 0.598065 GCGAAATTGCCTTCCACACT 59.402 50.000 0.00 0.00 0.00 3.55
2861 3806 0.839946 ATGGGCGGATGTTCTAGCTT 59.160 50.000 0.00 0.00 0.00 3.74
2920 3865 2.933573 AGTACCCTCTTGATCGACGAT 58.066 47.619 10.78 10.78 0.00 3.73
2954 3899 9.023967 CATTTGCTAATTAAATAAGTGCAGGAC 57.976 33.333 0.00 0.00 0.00 3.85
3065 4017 7.051623 TGAACCAAAGCTCTGTTTTCTACTAA 58.948 34.615 0.00 0.00 0.00 2.24
3113 4065 3.703052 GGTCCCGGTTCTAGACTAAATCA 59.297 47.826 0.00 0.00 0.00 2.57
3115 4067 3.716431 TGGTCCCGGTTCTAGACTAAAT 58.284 45.455 0.00 0.00 0.00 1.40
3118 4070 2.905415 TTGGTCCCGGTTCTAGACTA 57.095 50.000 0.00 0.00 0.00 2.59
3155 4107 3.411517 CCCCCTGGGCTCACGAAT 61.412 66.667 7.39 0.00 35.35 3.34
3199 4151 0.841289 AAAGGTCCAGACAAACCGGA 59.159 50.000 9.46 0.00 40.63 5.14
3293 4245 0.893727 CCTTTGGTCCCGGTTCAAGG 60.894 60.000 0.00 0.54 0.00 3.61
3607 4559 1.300233 GTCGGTGATGAGATCGGCC 60.300 63.158 0.00 0.00 0.00 6.13


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.