Multiple sequence alignment - TraesCS3A01G524800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G524800 chr3A 100.000 9169 0 0 1 9169 739388835 739398003 0.000000e+00 16933.0
1 TraesCS3A01G524800 chr3A 91.549 71 6 0 3432 3502 739392227 739392297 2.110000e-16 99.0
2 TraesCS3A01G524800 chr3A 91.549 71 6 0 3393 3463 739392266 739392336 2.110000e-16 99.0
3 TraesCS3A01G524800 chr3A 91.228 57 4 1 350 405 728313077 728313133 9.870000e-10 76.8
4 TraesCS3A01G524800 chr3A 91.837 49 3 1 3454 3502 739392211 739392258 5.940000e-07 67.6
5 TraesCS3A01G524800 chr3A 91.837 49 3 1 3377 3424 739392288 739392336 5.940000e-07 67.6
6 TraesCS3A01G524800 chr3B 95.615 5838 165 25 703 6474 816297345 816303157 0.000000e+00 9278.0
7 TraesCS3A01G524800 chr3B 95.263 2280 74 15 6473 8729 816303240 816305508 0.000000e+00 3581.0
8 TraesCS3A01G524800 chr3B 86.598 291 19 12 8757 9027 816305578 816305868 4.160000e-78 303.0
9 TraesCS3A01G524800 chr3B 83.929 112 11 5 490 601 816296992 816297096 5.860000e-17 100.0
10 TraesCS3A01G524800 chr3B 90.141 71 7 0 3432 3502 816300056 816300126 9.800000e-15 93.5
11 TraesCS3A01G524800 chr3B 100.000 41 0 0 9129 9169 816307488 816307528 9.870000e-10 76.8
12 TraesCS3A01G524800 chr3B 93.878 49 3 0 357 405 567533359 567533407 3.550000e-09 75.0
13 TraesCS3A01G524800 chr3B 91.837 49 3 1 3454 3502 816300040 816300087 5.940000e-07 67.6
14 TraesCS3A01G524800 chr3D 96.044 4500 107 19 718 5169 606996065 607000541 0.000000e+00 7258.0
15 TraesCS3A01G524800 chr3D 97.457 3578 66 11 5166 8729 607000653 607004219 0.000000e+00 6080.0
16 TraesCS3A01G524800 chr3D 91.549 71 6 0 3393 3463 606998800 606998870 2.110000e-16 99.0
17 TraesCS3A01G524800 chr3D 88.732 71 8 0 3432 3502 606998761 606998831 4.560000e-13 87.9
18 TraesCS3A01G524800 chr3D 87.324 71 9 0 9057 9127 607006802 607006872 2.120000e-11 82.4
19 TraesCS3A01G524800 chr2D 84.532 2935 342 55 3462 6335 14096140 14093257 0.000000e+00 2802.0
20 TraesCS3A01G524800 chr2D 84.991 1106 121 31 6415 7490 14093200 14092110 0.000000e+00 1081.0
21 TraesCS3A01G524800 chr2D 79.494 751 99 26 1276 1979 14098170 14097428 4.980000e-132 483.0
22 TraesCS3A01G524800 chr2D 80.259 694 74 28 4570 5245 44596809 44596161 1.800000e-126 464.0
23 TraesCS3A01G524800 chr2D 87.629 388 48 0 3037 3424 14096487 14096100 1.400000e-122 451.0
24 TraesCS3A01G524800 chr2D 80.501 359 64 4 890 1247 14098807 14098454 4.220000e-68 270.0
25 TraesCS3A01G524800 chr2B 85.623 2664 300 53 3704 6335 25599158 25596546 0.000000e+00 2721.0
26 TraesCS3A01G524800 chr2B 85.155 1098 130 27 6415 7490 25596490 25595404 0.000000e+00 1094.0
27 TraesCS3A01G524800 chr2B 80.586 989 128 27 1276 2216 25601369 25600397 0.000000e+00 704.0
28 TraesCS3A01G524800 chr2B 82.521 698 79 21 4571 5250 71364944 71364272 2.870000e-159 573.0
29 TraesCS3A01G524800 chr2B 87.371 388 49 0 3037 3424 25599780 25599393 6.530000e-121 446.0
30 TraesCS3A01G524800 chr2B 80.110 362 65 5 888 1247 25601721 25601365 7.060000e-66 263.0
31 TraesCS3A01G524800 chr2A 85.203 2656 322 42 3704 6335 16468772 16466164 0.000000e+00 2662.0
32 TraesCS3A01G524800 chr2A 84.740 924 99 31 6592 7490 16466051 16465145 0.000000e+00 887.0
33 TraesCS3A01G524800 chr2A 78.693 995 127 34 1277 2216 16470975 16470011 1.330000e-162 584.0
34 TraesCS3A01G524800 chr2A 80.966 704 93 19 4564 5250 48453462 48452783 3.790000e-143 520.0
35 TraesCS3A01G524800 chr2A 88.144 388 46 0 3037 3424 16469395 16469008 6.490000e-126 462.0
36 TraesCS3A01G524800 chr2A 81.818 264 43 4 901 1164 16471318 16471060 5.580000e-52 217.0
37 TraesCS3A01G524800 chrUn 79.281 835 100 28 4394 5204 88909044 88908259 4.910000e-142 516.0
38 TraesCS3A01G524800 chr5A 91.489 141 12 0 4394 4534 622417023 622417163 2.610000e-45 195.0
39 TraesCS3A01G524800 chr1B 94.340 53 3 0 356 408 389226715 389226663 2.120000e-11 82.4
40 TraesCS3A01G524800 chr1B 94.118 51 2 1 355 405 401374676 401374725 9.870000e-10 76.8
41 TraesCS3A01G524800 chr4D 92.727 55 4 0 354 408 419112737 419112683 7.630000e-11 80.5
42 TraesCS3A01G524800 chr1D 94.231 52 3 0 354 405 415634309 415634360 7.630000e-11 80.5
43 TraesCS3A01G524800 chr4B 92.727 55 3 1 350 404 105335717 105335664 2.740000e-10 78.7
44 TraesCS3A01G524800 chr4B 94.231 52 2 1 354 405 653953223 653953273 2.740000e-10 78.7
45 TraesCS3A01G524800 chr5B 94.000 50 2 1 356 405 417587147 417587099 3.550000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G524800 chr3A 739388835 739398003 9168 False 16933.000000 16933 100.000000 1 9169 1 chr3A.!!$F2 9168
1 TraesCS3A01G524800 chr3B 816296992 816307528 10536 False 1928.557143 9278 91.911857 490 9169 7 chr3B.!!$F2 8679
2 TraesCS3A01G524800 chr3D 606996065 607006872 10807 False 2721.460000 7258 92.221200 718 9127 5 chr3D.!!$F1 8409
3 TraesCS3A01G524800 chr2D 14092110 14098807 6697 True 1017.400000 2802 83.429400 890 7490 5 chr2D.!!$R2 6600
4 TraesCS3A01G524800 chr2D 44596161 44596809 648 True 464.000000 464 80.259000 4570 5245 1 chr2D.!!$R1 675
5 TraesCS3A01G524800 chr2B 25595404 25601721 6317 True 1045.600000 2721 83.769000 888 7490 5 chr2B.!!$R2 6602
6 TraesCS3A01G524800 chr2B 71364272 71364944 672 True 573.000000 573 82.521000 4571 5250 1 chr2B.!!$R1 679
7 TraesCS3A01G524800 chr2A 16465145 16471318 6173 True 962.400000 2662 83.719600 901 7490 5 chr2A.!!$R2 6589
8 TraesCS3A01G524800 chr2A 48452783 48453462 679 True 520.000000 520 80.966000 4564 5250 1 chr2A.!!$R1 686
9 TraesCS3A01G524800 chrUn 88908259 88909044 785 True 516.000000 516 79.281000 4394 5204 1 chrUn.!!$R1 810

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
282 283 0.035317 CTGCCCGCAATGCCTATCTA 59.965 55.000 0.00 0.0 0.00 1.98 F
337 338 0.099436 GATTCATTGCAGTGGCGACC 59.901 55.000 9.56 0.0 45.35 4.79 F
622 623 0.238289 CGTGGTTTCTGGTCATGCAC 59.762 55.000 0.00 0.0 0.00 4.57 F
1358 1817 0.099436 GATTGCAATGGCGTGGTCTC 59.901 55.000 18.59 0.0 45.35 3.36 F
1458 1937 1.070821 CAGCCATATACATCCGTGCG 58.929 55.000 0.00 0.0 0.00 5.34 F
2786 3417 2.035961 GCTGGCCAAGTATCATCGTCTA 59.964 50.000 7.01 0.0 0.00 2.59 F
3467 4098 1.139853 ACATCGAGATGAAGGAAGGGC 59.860 52.381 18.76 0.0 41.20 5.19 F
3524 4155 1.201647 CAAAGCTTGGCTCAGTGGATG 59.798 52.381 0.00 0.0 38.25 3.51 F
3660 4291 2.359230 GGTGAGTGCAGAGCCCAC 60.359 66.667 0.00 0.0 0.00 4.61 F
5632 6492 0.099436 CTTGCCCATCTACAAAGCGC 59.901 55.000 0.00 0.0 0.00 5.92 F
6683 7653 0.107508 TGCCATGCAGAGGAGCTAAC 60.108 55.000 11.90 0.0 33.32 2.34 F
7510 8503 1.808411 TTCGGTGGCATCAGTTCTTC 58.192 50.000 0.00 0.0 0.00 2.87 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1083 1254 1.400990 GCTGAAGAATTTGCGCTGCG 61.401 55.000 19.17 19.17 0.00 5.18 R
1334 1793 2.406616 ACGCCATTGCAATCGTCCC 61.407 57.895 17.57 1.89 37.32 4.46 R
2524 3153 1.898574 CAGTTGGCACTCCACCACC 60.899 63.158 0.00 0.00 43.33 4.61 R
2686 3317 0.813184 TGGAACTACCCGATGTCGAC 59.187 55.000 9.11 9.11 37.88 4.20 R
3109 3740 0.981943 CCGAAGTAGGGGAAGTTGGT 59.018 55.000 0.00 0.00 0.00 3.67 R
4296 4982 1.004044 CTCCACCTCCTTGTCTGCAAT 59.996 52.381 0.00 0.00 33.65 3.56 R
5416 6272 1.547372 CTTCCCCACTTGCAGATTTGG 59.453 52.381 0.00 0.00 0.00 3.28 R
5632 6492 9.385902 GGATGACAATACAAAACATAATCATCG 57.614 33.333 0.00 0.00 40.41 3.84 R
5811 6671 3.682858 CCACAACTACACCATCCTTAACG 59.317 47.826 0.00 0.00 0.00 3.18 R
7493 8486 0.798776 GTGAAGAACTGATGCCACCG 59.201 55.000 0.00 0.00 0.00 4.94 R
7774 8767 1.250328 CATGCACCAAAGCCTCAAGA 58.750 50.000 0.00 0.00 0.00 3.02 R
8984 10053 2.103094 TCCATCATCCATCGAGTCCAAC 59.897 50.000 0.00 0.00 0.00 3.77 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 59 4.423209 GGCCTCCTCCTCCCCAGT 62.423 72.222 0.00 0.00 0.00 4.00
59 60 2.696893 GCCTCCTCCTCCCCAGTA 59.303 66.667 0.00 0.00 0.00 2.74
60 61 1.003051 GCCTCCTCCTCCCCAGTAA 59.997 63.158 0.00 0.00 0.00 2.24
61 62 1.051556 GCCTCCTCCTCCCCAGTAAG 61.052 65.000 0.00 0.00 0.00 2.34
62 63 1.051556 CCTCCTCCTCCCCAGTAAGC 61.052 65.000 0.00 0.00 0.00 3.09
63 64 1.003051 TCCTCCTCCCCAGTAAGCC 59.997 63.158 0.00 0.00 0.00 4.35
64 65 2.073101 CCTCCTCCCCAGTAAGCCC 61.073 68.421 0.00 0.00 0.00 5.19
65 66 2.042261 TCCTCCCCAGTAAGCCCC 59.958 66.667 0.00 0.00 0.00 5.80
66 67 3.097162 CCTCCCCAGTAAGCCCCC 61.097 72.222 0.00 0.00 0.00 5.40
67 68 3.480133 CTCCCCAGTAAGCCCCCG 61.480 72.222 0.00 0.00 0.00 5.73
145 146 4.087892 CCCCGCTGGTCTGGTGAG 62.088 72.222 0.00 0.00 0.00 3.51
146 147 4.767255 CCCGCTGGTCTGGTGAGC 62.767 72.222 0.00 0.00 40.79 4.26
147 148 4.767255 CCGCTGGTCTGGTGAGCC 62.767 72.222 0.00 0.00 39.75 4.70
149 150 4.767255 GCTGGTCTGGTGAGCCGG 62.767 72.222 0.00 0.00 42.59 6.13
150 151 3.314331 CTGGTCTGGTGAGCCGGT 61.314 66.667 1.90 0.00 41.89 5.28
151 152 3.596066 CTGGTCTGGTGAGCCGGTG 62.596 68.421 1.90 0.00 41.89 4.94
152 153 4.394712 GGTCTGGTGAGCCGGTGG 62.395 72.222 1.90 0.00 41.89 4.61
171 172 3.994853 GTCCCCGACCGAACCGTT 61.995 66.667 0.00 0.00 0.00 4.44
172 173 2.282816 TCCCCGACCGAACCGTTA 60.283 61.111 0.00 0.00 0.00 3.18
173 174 1.682005 TCCCCGACCGAACCGTTAT 60.682 57.895 0.00 0.00 0.00 1.89
174 175 1.227060 CCCCGACCGAACCGTTATC 60.227 63.158 0.00 0.00 0.00 1.75
175 176 1.587088 CCCGACCGAACCGTTATCG 60.587 63.158 5.48 5.48 39.92 2.92
176 177 1.137404 CCGACCGAACCGTTATCGT 59.863 57.895 9.80 0.00 38.60 3.73
177 178 0.863119 CCGACCGAACCGTTATCGTC 60.863 60.000 9.80 4.06 38.60 4.20
178 179 0.097674 CGACCGAACCGTTATCGTCT 59.902 55.000 4.62 0.00 38.60 4.18
179 180 1.542544 GACCGAACCGTTATCGTCTG 58.457 55.000 0.00 0.00 38.60 3.51
180 181 0.883833 ACCGAACCGTTATCGTCTGT 59.116 50.000 0.00 0.00 38.60 3.41
181 182 1.270550 ACCGAACCGTTATCGTCTGTT 59.729 47.619 0.00 0.00 38.60 3.16
182 183 2.288395 ACCGAACCGTTATCGTCTGTTT 60.288 45.455 0.00 0.00 38.60 2.83
183 184 2.733026 CCGAACCGTTATCGTCTGTTTT 59.267 45.455 0.00 0.00 38.60 2.43
184 185 3.184986 CCGAACCGTTATCGTCTGTTTTT 59.815 43.478 0.00 0.00 38.60 1.94
229 230 9.953565 ATAATAATACTATTTTGCCTTAGCCGA 57.046 29.630 0.00 0.00 38.69 5.54
230 231 8.685838 AATAATACTATTTTGCCTTAGCCGAA 57.314 30.769 0.00 0.00 38.69 4.30
231 232 6.373186 AATACTATTTTGCCTTAGCCGAAC 57.627 37.500 0.00 0.00 38.69 3.95
232 233 3.014623 ACTATTTTGCCTTAGCCGAACC 58.985 45.455 0.00 0.00 38.69 3.62
233 234 2.215942 ATTTTGCCTTAGCCGAACCT 57.784 45.000 0.00 0.00 38.69 3.50
234 235 2.863132 TTTTGCCTTAGCCGAACCTA 57.137 45.000 0.00 0.00 38.69 3.08
235 236 3.359695 TTTTGCCTTAGCCGAACCTAT 57.640 42.857 0.00 0.00 38.69 2.57
236 237 2.325583 TTGCCTTAGCCGAACCTATG 57.674 50.000 0.00 0.00 38.69 2.23
237 238 1.491668 TGCCTTAGCCGAACCTATGA 58.508 50.000 0.00 0.00 38.69 2.15
238 239 2.047061 TGCCTTAGCCGAACCTATGAT 58.953 47.619 0.00 0.00 38.69 2.45
239 240 2.224281 TGCCTTAGCCGAACCTATGATG 60.224 50.000 0.00 0.00 38.69 3.07
240 241 2.224305 GCCTTAGCCGAACCTATGATGT 60.224 50.000 0.00 0.00 0.00 3.06
241 242 3.393800 CCTTAGCCGAACCTATGATGTG 58.606 50.000 0.00 0.00 0.00 3.21
242 243 2.526304 TAGCCGAACCTATGATGTGC 57.474 50.000 0.00 0.00 0.00 4.57
243 244 0.833287 AGCCGAACCTATGATGTGCT 59.167 50.000 0.00 0.00 0.00 4.40
244 245 1.210478 AGCCGAACCTATGATGTGCTT 59.790 47.619 0.00 0.00 0.00 3.91
245 246 1.331756 GCCGAACCTATGATGTGCTTG 59.668 52.381 0.00 0.00 0.00 4.01
246 247 2.632377 CCGAACCTATGATGTGCTTGT 58.368 47.619 0.00 0.00 0.00 3.16
247 248 3.009723 CCGAACCTATGATGTGCTTGTT 58.990 45.455 0.00 0.00 0.00 2.83
248 249 3.063997 CCGAACCTATGATGTGCTTGTTC 59.936 47.826 0.00 0.00 0.00 3.18
249 250 3.935203 CGAACCTATGATGTGCTTGTTCT 59.065 43.478 0.00 0.00 0.00 3.01
250 251 4.033358 CGAACCTATGATGTGCTTGTTCTC 59.967 45.833 0.00 0.00 0.00 2.87
251 252 3.525537 ACCTATGATGTGCTTGTTCTCG 58.474 45.455 0.00 0.00 0.00 4.04
252 253 3.195610 ACCTATGATGTGCTTGTTCTCGA 59.804 43.478 0.00 0.00 0.00 4.04
253 254 3.553511 CCTATGATGTGCTTGTTCTCGAC 59.446 47.826 0.00 0.00 0.00 4.20
254 255 2.820059 TGATGTGCTTGTTCTCGACT 57.180 45.000 0.00 0.00 0.00 4.18
255 256 2.407090 TGATGTGCTTGTTCTCGACTG 58.593 47.619 0.00 0.00 0.00 3.51
256 257 1.728971 GATGTGCTTGTTCTCGACTGG 59.271 52.381 0.00 0.00 0.00 4.00
257 258 0.880278 TGTGCTTGTTCTCGACTGGC 60.880 55.000 0.00 0.00 0.00 4.85
258 259 1.664649 TGCTTGTTCTCGACTGGCG 60.665 57.895 0.00 0.00 42.69 5.69
259 260 2.383527 GCTTGTTCTCGACTGGCGG 61.384 63.158 1.72 0.00 41.33 6.13
260 261 2.357034 TTGTTCTCGACTGGCGGC 60.357 61.111 1.72 0.00 41.33 6.53
261 262 2.771763 CTTGTTCTCGACTGGCGGCT 62.772 60.000 11.43 0.00 41.33 5.52
262 263 2.811317 GTTCTCGACTGGCGGCTG 60.811 66.667 14.42 14.42 41.33 4.85
263 264 4.742201 TTCTCGACTGGCGGCTGC 62.742 66.667 9.72 9.72 41.33 5.25
279 280 2.908940 GCTGCCCGCAATGCCTAT 60.909 61.111 0.00 0.00 38.92 2.57
280 281 2.912624 GCTGCCCGCAATGCCTATC 61.913 63.158 0.00 0.00 38.92 2.08
281 282 1.228063 CTGCCCGCAATGCCTATCT 60.228 57.895 0.00 0.00 0.00 1.98
282 283 0.035317 CTGCCCGCAATGCCTATCTA 59.965 55.000 0.00 0.00 0.00 1.98
283 284 0.692476 TGCCCGCAATGCCTATCTAT 59.308 50.000 0.00 0.00 0.00 1.98
284 285 1.339055 TGCCCGCAATGCCTATCTATC 60.339 52.381 0.00 0.00 0.00 2.08
285 286 1.339055 GCCCGCAATGCCTATCTATCA 60.339 52.381 0.00 0.00 0.00 2.15
286 287 2.625737 CCCGCAATGCCTATCTATCAG 58.374 52.381 0.00 0.00 0.00 2.90
287 288 2.027745 CCCGCAATGCCTATCTATCAGT 60.028 50.000 0.00 0.00 0.00 3.41
288 289 2.998670 CCGCAATGCCTATCTATCAGTG 59.001 50.000 0.00 0.00 0.00 3.66
289 290 3.555795 CCGCAATGCCTATCTATCAGTGT 60.556 47.826 0.00 0.00 0.00 3.55
290 291 4.060900 CGCAATGCCTATCTATCAGTGTT 58.939 43.478 0.00 0.00 0.00 3.32
291 292 4.151335 CGCAATGCCTATCTATCAGTGTTC 59.849 45.833 0.00 0.00 0.00 3.18
292 293 5.059161 GCAATGCCTATCTATCAGTGTTCA 58.941 41.667 0.00 0.00 0.00 3.18
293 294 5.049818 GCAATGCCTATCTATCAGTGTTCAC 60.050 44.000 0.00 0.00 0.00 3.18
294 295 5.876651 ATGCCTATCTATCAGTGTTCACA 57.123 39.130 5.74 0.00 0.00 3.58
295 296 5.876651 TGCCTATCTATCAGTGTTCACAT 57.123 39.130 5.74 0.00 0.00 3.21
296 297 5.604565 TGCCTATCTATCAGTGTTCACATG 58.395 41.667 5.74 0.00 0.00 3.21
297 298 4.993584 GCCTATCTATCAGTGTTCACATGG 59.006 45.833 5.74 0.00 0.00 3.66
298 299 4.993584 CCTATCTATCAGTGTTCACATGGC 59.006 45.833 5.74 0.00 0.00 4.40
299 300 3.979101 TCTATCAGTGTTCACATGGCA 57.021 42.857 5.74 0.00 0.00 4.92
300 301 4.492494 TCTATCAGTGTTCACATGGCAT 57.508 40.909 0.00 0.00 0.00 4.40
301 302 4.847198 TCTATCAGTGTTCACATGGCATT 58.153 39.130 0.00 0.00 0.00 3.56
302 303 5.255687 TCTATCAGTGTTCACATGGCATTT 58.744 37.500 0.00 0.00 0.00 2.32
303 304 3.921119 TCAGTGTTCACATGGCATTTC 57.079 42.857 0.00 0.00 0.00 2.17
304 305 3.220940 TCAGTGTTCACATGGCATTTCA 58.779 40.909 0.00 0.00 0.00 2.69
305 306 3.827876 TCAGTGTTCACATGGCATTTCAT 59.172 39.130 0.00 0.00 0.00 2.57
306 307 5.008980 TCAGTGTTCACATGGCATTTCATA 58.991 37.500 0.00 0.00 0.00 2.15
307 308 5.653330 TCAGTGTTCACATGGCATTTCATAT 59.347 36.000 0.00 0.00 0.00 1.78
308 309 5.746721 CAGTGTTCACATGGCATTTCATATG 59.253 40.000 0.00 0.00 0.00 1.78
309 310 4.505191 GTGTTCACATGGCATTTCATATGC 59.495 41.667 0.00 1.21 43.85 3.14
320 321 6.814506 GCATTTCATATGCCAGACTTAGAT 57.185 37.500 0.00 0.00 39.01 1.98
321 322 7.211966 GCATTTCATATGCCAGACTTAGATT 57.788 36.000 0.00 0.00 39.01 2.40
322 323 7.303998 GCATTTCATATGCCAGACTTAGATTC 58.696 38.462 0.00 0.00 39.01 2.52
323 324 7.040892 GCATTTCATATGCCAGACTTAGATTCA 60.041 37.037 0.00 0.00 39.01 2.57
324 325 9.011095 CATTTCATATGCCAGACTTAGATTCAT 57.989 33.333 0.00 0.00 0.00 2.57
325 326 8.985315 TTTCATATGCCAGACTTAGATTCATT 57.015 30.769 0.00 0.00 0.00 2.57
326 327 7.974482 TCATATGCCAGACTTAGATTCATTG 57.026 36.000 0.00 0.00 0.00 2.82
327 328 6.429078 TCATATGCCAGACTTAGATTCATTGC 59.571 38.462 0.00 0.00 0.00 3.56
328 329 3.954200 TGCCAGACTTAGATTCATTGCA 58.046 40.909 0.00 0.00 0.00 4.08
329 330 3.943381 TGCCAGACTTAGATTCATTGCAG 59.057 43.478 0.00 0.00 0.00 4.41
330 331 3.944015 GCCAGACTTAGATTCATTGCAGT 59.056 43.478 0.00 0.00 0.00 4.40
331 332 4.201891 GCCAGACTTAGATTCATTGCAGTG 60.202 45.833 2.16 2.16 0.00 3.66
332 333 4.334759 CCAGACTTAGATTCATTGCAGTGG 59.665 45.833 9.56 0.00 0.00 4.00
333 334 3.944015 AGACTTAGATTCATTGCAGTGGC 59.056 43.478 9.56 0.00 41.68 5.01
334 335 2.679837 ACTTAGATTCATTGCAGTGGCG 59.320 45.455 9.56 0.00 45.35 5.69
335 336 2.689553 TAGATTCATTGCAGTGGCGA 57.310 45.000 9.56 0.00 45.35 5.54
336 337 1.089920 AGATTCATTGCAGTGGCGAC 58.910 50.000 9.56 0.00 45.35 5.19
337 338 0.099436 GATTCATTGCAGTGGCGACC 59.901 55.000 9.56 0.00 45.35 4.79
338 339 0.322816 ATTCATTGCAGTGGCGACCT 60.323 50.000 9.56 0.00 45.35 3.85
339 340 0.537143 TTCATTGCAGTGGCGACCTT 60.537 50.000 9.56 0.00 45.35 3.50
340 341 1.210931 CATTGCAGTGGCGACCTTG 59.789 57.895 0.32 0.00 45.35 3.61
341 342 1.973281 ATTGCAGTGGCGACCTTGG 60.973 57.895 0.00 0.00 45.35 3.61
342 343 2.697147 ATTGCAGTGGCGACCTTGGT 62.697 55.000 0.00 0.00 45.35 3.67
343 344 3.357079 GCAGTGGCGACCTTGGTG 61.357 66.667 0.00 0.00 0.00 4.17
344 345 2.111043 CAGTGGCGACCTTGGTGT 59.889 61.111 0.00 0.00 0.00 4.16
345 346 1.525995 CAGTGGCGACCTTGGTGTT 60.526 57.895 0.00 0.00 0.00 3.32
346 347 1.101049 CAGTGGCGACCTTGGTGTTT 61.101 55.000 0.00 0.00 0.00 2.83
347 348 0.470766 AGTGGCGACCTTGGTGTTTA 59.529 50.000 0.00 0.00 0.00 2.01
348 349 0.589708 GTGGCGACCTTGGTGTTTAC 59.410 55.000 0.00 0.00 0.00 2.01
349 350 0.470766 TGGCGACCTTGGTGTTTACT 59.529 50.000 0.00 0.00 0.00 2.24
350 351 0.872388 GGCGACCTTGGTGTTTACTG 59.128 55.000 0.00 0.00 0.00 2.74
351 352 1.589803 GCGACCTTGGTGTTTACTGT 58.410 50.000 0.00 0.00 0.00 3.55
352 353 1.944709 GCGACCTTGGTGTTTACTGTT 59.055 47.619 0.00 0.00 0.00 3.16
353 354 2.356695 GCGACCTTGGTGTTTACTGTTT 59.643 45.455 0.00 0.00 0.00 2.83
354 355 3.181494 GCGACCTTGGTGTTTACTGTTTT 60.181 43.478 0.00 0.00 0.00 2.43
355 356 4.675933 GCGACCTTGGTGTTTACTGTTTTT 60.676 41.667 0.00 0.00 0.00 1.94
377 378 4.421033 TTTTCAACACAGTACAAACGCA 57.579 36.364 0.00 0.00 0.00 5.24
378 379 4.421033 TTTCAACACAGTACAAACGCAA 57.579 36.364 0.00 0.00 0.00 4.85
380 381 2.108700 CAACACAGTACAAACGCAAGC 58.891 47.619 0.00 0.00 45.62 4.01
381 382 1.374560 ACACAGTACAAACGCAAGCA 58.625 45.000 0.00 0.00 45.62 3.91
382 383 1.063469 ACACAGTACAAACGCAAGCAC 59.937 47.619 0.00 0.00 45.62 4.40
383 384 1.330521 CACAGTACAAACGCAAGCACT 59.669 47.619 0.00 0.00 45.62 4.40
384 385 1.597663 ACAGTACAAACGCAAGCACTC 59.402 47.619 0.00 0.00 45.62 3.51
385 386 1.597195 CAGTACAAACGCAAGCACTCA 59.403 47.619 0.00 0.00 45.62 3.41
386 387 2.224079 CAGTACAAACGCAAGCACTCAT 59.776 45.455 0.00 0.00 45.62 2.90
387 388 3.431912 CAGTACAAACGCAAGCACTCATA 59.568 43.478 0.00 0.00 45.62 2.15
388 389 4.093408 CAGTACAAACGCAAGCACTCATAT 59.907 41.667 0.00 0.00 45.62 1.78
389 390 5.290885 CAGTACAAACGCAAGCACTCATATA 59.709 40.000 0.00 0.00 45.62 0.86
390 391 6.018751 CAGTACAAACGCAAGCACTCATATAT 60.019 38.462 0.00 0.00 45.62 0.86
391 392 7.169140 CAGTACAAACGCAAGCACTCATATATA 59.831 37.037 0.00 0.00 45.62 0.86
392 393 6.287107 ACAAACGCAAGCACTCATATATAC 57.713 37.500 0.00 0.00 45.62 1.47
393 394 5.815222 ACAAACGCAAGCACTCATATATACA 59.185 36.000 0.00 0.00 45.62 2.29
394 395 5.907197 AACGCAAGCACTCATATATACAC 57.093 39.130 0.00 0.00 45.62 2.90
395 396 3.981416 ACGCAAGCACTCATATATACACG 59.019 43.478 0.00 0.00 45.62 4.49
396 397 3.181540 CGCAAGCACTCATATATACACGC 60.182 47.826 0.00 0.00 0.00 5.34
397 398 3.740832 GCAAGCACTCATATATACACGCA 59.259 43.478 0.00 0.00 0.00 5.24
398 399 4.389992 GCAAGCACTCATATATACACGCAT 59.610 41.667 0.00 0.00 0.00 4.73
399 400 5.576774 GCAAGCACTCATATATACACGCATA 59.423 40.000 0.00 0.00 0.00 3.14
400 401 6.454318 GCAAGCACTCATATATACACGCATAC 60.454 42.308 0.00 0.00 0.00 2.39
401 402 6.267496 AGCACTCATATATACACGCATACA 57.733 37.500 0.00 0.00 0.00 2.29
402 403 6.093404 AGCACTCATATATACACGCATACAC 58.907 40.000 0.00 0.00 0.00 2.90
403 404 6.071896 AGCACTCATATATACACGCATACACT 60.072 38.462 0.00 0.00 0.00 3.55
404 405 6.251589 GCACTCATATATACACGCATACACTC 59.748 42.308 0.00 0.00 0.00 3.51
405 406 6.466097 CACTCATATATACACGCATACACTCG 59.534 42.308 0.00 0.00 0.00 4.18
406 407 5.329493 TCATATATACACGCATACACTCGC 58.671 41.667 0.00 0.00 0.00 5.03
407 408 2.410785 TATACACGCATACACTCGCC 57.589 50.000 0.00 0.00 0.00 5.54
408 409 0.594028 ATACACGCATACACTCGCCG 60.594 55.000 0.00 0.00 0.00 6.46
409 410 1.646624 TACACGCATACACTCGCCGA 61.647 55.000 0.00 0.00 0.00 5.54
410 411 2.202570 ACGCATACACTCGCCGAC 60.203 61.111 0.00 0.00 0.00 4.79
411 412 2.954868 CGCATACACTCGCCGACC 60.955 66.667 0.00 0.00 0.00 4.79
412 413 2.494918 GCATACACTCGCCGACCT 59.505 61.111 0.00 0.00 0.00 3.85
413 414 1.153628 GCATACACTCGCCGACCTT 60.154 57.895 0.00 0.00 0.00 3.50
414 415 1.421410 GCATACACTCGCCGACCTTG 61.421 60.000 0.00 0.00 0.00 3.61
415 416 0.806102 CATACACTCGCCGACCTTGG 60.806 60.000 0.00 0.00 0.00 3.61
416 417 1.255667 ATACACTCGCCGACCTTGGT 61.256 55.000 0.00 0.00 0.00 3.67
417 418 2.149803 TACACTCGCCGACCTTGGTG 62.150 60.000 0.00 2.35 40.98 4.17
418 419 3.231736 ACTCGCCGACCTTGGTGT 61.232 61.111 0.00 0.00 40.48 4.16
419 420 2.030562 CTCGCCGACCTTGGTGTT 59.969 61.111 0.00 0.00 40.48 3.32
420 421 1.597027 CTCGCCGACCTTGGTGTTT 60.597 57.895 0.00 0.00 40.48 2.83
421 422 0.320073 CTCGCCGACCTTGGTGTTTA 60.320 55.000 0.00 0.00 40.48 2.01
422 423 0.600782 TCGCCGACCTTGGTGTTTAC 60.601 55.000 0.00 0.00 40.48 2.01
423 424 0.601841 CGCCGACCTTGGTGTTTACT 60.602 55.000 0.00 0.00 34.75 2.24
424 425 0.872388 GCCGACCTTGGTGTTTACTG 59.128 55.000 0.00 0.00 0.00 2.74
425 426 1.812708 GCCGACCTTGGTGTTTACTGT 60.813 52.381 0.00 0.00 0.00 3.55
426 427 2.567985 CCGACCTTGGTGTTTACTGTT 58.432 47.619 0.00 0.00 0.00 3.16
427 428 3.731089 CCGACCTTGGTGTTTACTGTTA 58.269 45.455 0.00 0.00 0.00 2.41
428 429 3.744426 CCGACCTTGGTGTTTACTGTTAG 59.256 47.826 0.00 0.00 0.00 2.34
429 430 4.374399 CGACCTTGGTGTTTACTGTTAGT 58.626 43.478 0.00 0.00 0.00 2.24
430 431 4.210537 CGACCTTGGTGTTTACTGTTAGTG 59.789 45.833 0.00 0.00 0.00 2.74
431 432 5.106876 ACCTTGGTGTTTACTGTTAGTGT 57.893 39.130 0.00 0.00 0.00 3.55
432 433 6.237887 ACCTTGGTGTTTACTGTTAGTGTA 57.762 37.500 0.00 0.00 0.00 2.90
433 434 6.652053 ACCTTGGTGTTTACTGTTAGTGTAA 58.348 36.000 0.00 0.00 0.00 2.41
434 435 7.284820 ACCTTGGTGTTTACTGTTAGTGTAAT 58.715 34.615 0.00 0.00 31.13 1.89
435 436 7.776500 ACCTTGGTGTTTACTGTTAGTGTAATT 59.224 33.333 0.00 0.00 31.13 1.40
436 437 8.073768 CCTTGGTGTTTACTGTTAGTGTAATTG 58.926 37.037 0.00 0.00 31.13 2.32
437 438 6.961576 TGGTGTTTACTGTTAGTGTAATTGC 58.038 36.000 0.00 0.00 31.13 3.56
438 439 6.542735 TGGTGTTTACTGTTAGTGTAATTGCA 59.457 34.615 0.00 0.00 31.13 4.08
439 440 7.229707 TGGTGTTTACTGTTAGTGTAATTGCAT 59.770 33.333 0.00 0.00 31.13 3.96
440 441 8.079809 GGTGTTTACTGTTAGTGTAATTGCATT 58.920 33.333 0.00 0.00 31.13 3.56
441 442 9.458374 GTGTTTACTGTTAGTGTAATTGCATTT 57.542 29.630 0.00 0.00 31.13 2.32
448 449 9.472995 CTGTTAGTGTAATTGCATTTTAGTACG 57.527 33.333 0.00 0.00 0.00 3.67
449 450 8.991026 TGTTAGTGTAATTGCATTTTAGTACGT 58.009 29.630 0.00 0.00 0.00 3.57
468 469 8.215899 AGTACGTATTTTTATCGTATAACGCC 57.784 34.615 0.00 0.00 42.21 5.68
469 470 6.127498 ACGTATTTTTATCGTATAACGCCG 57.873 37.500 0.00 0.00 42.21 6.46
470 471 5.912396 ACGTATTTTTATCGTATAACGCCGA 59.088 36.000 0.00 0.00 42.21 5.54
471 472 6.582295 ACGTATTTTTATCGTATAACGCCGAT 59.418 34.615 0.00 0.00 45.10 4.18
472 473 7.748683 ACGTATTTTTATCGTATAACGCCGATA 59.251 33.333 0.00 0.00 43.11 2.92
473 474 8.248440 CGTATTTTTATCGTATAACGCCGATAG 58.752 37.037 0.00 0.00 44.19 2.08
474 475 5.997732 TTTTATCGTATAACGCCGATAGC 57.002 39.130 0.00 0.00 44.19 2.97
475 476 2.556534 ATCGTATAACGCCGATAGCC 57.443 50.000 0.00 0.00 41.65 3.93
476 477 1.527034 TCGTATAACGCCGATAGCCT 58.473 50.000 0.00 0.00 42.21 4.58
477 478 1.198408 TCGTATAACGCCGATAGCCTG 59.802 52.381 0.00 0.00 42.21 4.85
478 479 1.198408 CGTATAACGCCGATAGCCTGA 59.802 52.381 0.00 0.00 38.78 3.86
479 480 2.159421 CGTATAACGCCGATAGCCTGAT 60.159 50.000 0.00 0.00 38.78 2.90
480 481 2.370281 ATAACGCCGATAGCCTGATG 57.630 50.000 0.00 0.00 38.78 3.07
481 482 0.317160 TAACGCCGATAGCCTGATGG 59.683 55.000 0.00 0.00 38.78 3.51
482 483 1.399744 AACGCCGATAGCCTGATGGA 61.400 55.000 0.00 0.00 38.78 3.41
483 484 1.188219 ACGCCGATAGCCTGATGGAT 61.188 55.000 0.00 0.00 38.78 3.41
484 485 0.459237 CGCCGATAGCCTGATGGATC 60.459 60.000 0.00 0.00 38.78 3.36
485 486 0.610174 GCCGATAGCCTGATGGATCA 59.390 55.000 0.00 0.00 34.35 2.92
486 487 1.209019 GCCGATAGCCTGATGGATCAT 59.791 52.381 0.00 0.00 36.02 2.45
487 488 2.741228 GCCGATAGCCTGATGGATCATC 60.741 54.545 0.00 1.28 37.14 2.92
488 489 2.498885 CCGATAGCCTGATGGATCATCA 59.501 50.000 9.80 9.80 46.84 3.07
498 499 5.705609 TGATGGATCATCATTCTTGCATG 57.294 39.130 6.50 0.00 44.60 4.06
499 500 4.022329 TGATGGATCATCATTCTTGCATGC 60.022 41.667 11.82 11.82 44.60 4.06
542 543 8.689061 TCAAAATCCTTACAATGATGATCTTGG 58.311 33.333 0.00 0.00 0.00 3.61
545 546 6.065976 TCCTTACAATGATGATCTTGGTGT 57.934 37.500 0.00 0.00 0.00 4.16
548 549 7.933577 TCCTTACAATGATGATCTTGGTGTATC 59.066 37.037 0.00 0.00 0.00 2.24
556 557 4.060205 TGATCTTGGTGTATCGATGCATG 58.940 43.478 19.32 10.14 0.00 4.06
558 559 1.941975 CTTGGTGTATCGATGCATGCA 59.058 47.619 25.04 25.04 0.00 3.96
559 560 1.298602 TGGTGTATCGATGCATGCAC 58.701 50.000 25.37 15.77 38.33 4.57
561 562 0.588252 GTGTATCGATGCATGCACCC 59.412 55.000 25.37 16.81 34.31 4.61
562 563 0.469494 TGTATCGATGCATGCACCCT 59.531 50.000 25.37 7.40 0.00 4.34
563 564 1.134128 TGTATCGATGCATGCACCCTT 60.134 47.619 25.37 6.94 0.00 3.95
564 565 1.532868 GTATCGATGCATGCACCCTTC 59.467 52.381 25.37 15.77 0.00 3.46
576 577 1.134068 GCACCCTTCCAAGATCCTACC 60.134 57.143 0.00 0.00 0.00 3.18
577 578 2.482494 CACCCTTCCAAGATCCTACCT 58.518 52.381 0.00 0.00 0.00 3.08
578 579 2.846827 CACCCTTCCAAGATCCTACCTT 59.153 50.000 0.00 0.00 0.00 3.50
582 583 4.950475 CCCTTCCAAGATCCTACCTTTTTC 59.050 45.833 0.00 0.00 0.00 2.29
596 597 6.724441 CCTACCTTTTTCCCTTCTTAACCAAT 59.276 38.462 0.00 0.00 0.00 3.16
601 602 5.699097 TTTCCCTTCTTAACCAATGAACG 57.301 39.130 0.00 0.00 0.00 3.95
602 603 3.681593 TCCCTTCTTAACCAATGAACGG 58.318 45.455 0.00 0.00 0.00 4.44
604 605 2.159572 CCTTCTTAACCAATGAACGGCG 60.160 50.000 4.80 4.80 0.00 6.46
605 606 2.172851 TCTTAACCAATGAACGGCGT 57.827 45.000 6.77 6.77 0.00 5.68
606 607 1.801771 TCTTAACCAATGAACGGCGTG 59.198 47.619 15.70 1.42 0.00 5.34
607 608 0.875728 TTAACCAATGAACGGCGTGG 59.124 50.000 15.70 13.14 0.00 4.94
610 611 1.104577 ACCAATGAACGGCGTGGTTT 61.105 50.000 15.70 4.37 0.00 3.27
611 612 0.386731 CCAATGAACGGCGTGGTTTC 60.387 55.000 15.70 8.07 0.00 2.78
613 614 0.591170 AATGAACGGCGTGGTTTCTG 59.409 50.000 15.70 0.00 0.00 3.02
614 615 1.234615 ATGAACGGCGTGGTTTCTGG 61.235 55.000 15.70 0.00 0.00 3.86
616 617 1.838568 GAACGGCGTGGTTTCTGGTC 61.839 60.000 15.70 0.00 0.00 4.02
617 618 2.280524 CGGCGTGGTTTCTGGTCA 60.281 61.111 0.00 0.00 0.00 4.02
619 620 1.875963 GGCGTGGTTTCTGGTCATG 59.124 57.895 0.00 0.00 0.00 3.07
620 621 1.210155 GCGTGGTTTCTGGTCATGC 59.790 57.895 0.00 0.00 36.47 4.06
621 622 1.514678 GCGTGGTTTCTGGTCATGCA 61.515 55.000 0.00 0.00 41.51 3.96
622 623 0.238289 CGTGGTTTCTGGTCATGCAC 59.762 55.000 0.00 0.00 0.00 4.57
625 706 3.081061 GTGGTTTCTGGTCATGCACATA 58.919 45.455 0.00 0.00 0.00 2.29
642 723 7.087409 TGCACATAATTGACTACTTTCATGG 57.913 36.000 0.00 0.00 0.00 3.66
645 726 5.880332 ACATAATTGACTACTTTCATGGCGT 59.120 36.000 0.00 0.00 0.00 5.68
646 727 4.685169 AATTGACTACTTTCATGGCGTG 57.315 40.909 0.00 0.00 0.00 5.34
647 728 2.093306 TGACTACTTTCATGGCGTGG 57.907 50.000 6.90 0.00 0.00 4.94
648 729 1.621317 TGACTACTTTCATGGCGTGGA 59.379 47.619 6.90 0.00 0.00 4.02
669 750 5.143369 GGATAGATTTCAGGAGGGCAAATT 58.857 41.667 0.00 0.00 0.00 1.82
679 760 5.476945 TCAGGAGGGCAAATTTTACTTCTTC 59.523 40.000 0.00 0.00 0.00 2.87
687 768 6.420903 GGCAAATTTTACTTCTTCCAAGTGAC 59.579 38.462 0.00 0.00 0.00 3.67
708 789 5.131594 ACGAAACCAGGACTAGAGTTTAC 57.868 43.478 0.00 0.00 32.80 2.01
747 828 7.174946 AGTCATGGTTGATTTACTGGTTACAAG 59.825 37.037 0.00 0.00 33.56 3.16
748 829 5.699097 TGGTTGATTTACTGGTTACAAGC 57.301 39.130 0.00 0.00 36.65 4.01
754 903 6.508777 TGATTTACTGGTTACAAGCAAAACC 58.491 36.000 0.00 0.00 44.51 3.27
788 937 4.021102 AGGCTACAGTTTATGTGCTTGT 57.979 40.909 0.00 0.00 43.80 3.16
791 940 4.475944 GCTACAGTTTATGTGCTTGTTGG 58.524 43.478 0.00 0.00 43.80 3.77
866 1035 7.641760 CAAAAATGAAGCTTTTGTAAATGCCT 58.358 30.769 0.00 0.05 38.43 4.75
947 1116 0.777446 ATGTGGGGTGGTTGTAGCTT 59.223 50.000 0.00 0.00 0.00 3.74
952 1121 1.610886 GGGGTGGTTGTAGCTTCTGAC 60.611 57.143 0.00 0.00 0.00 3.51
969 1140 5.961396 TCTGACCAGACTGTTACTAACTC 57.039 43.478 0.93 0.00 31.41 3.01
1083 1254 5.350640 CCAGAAACGTTATACAAAGGAGACC 59.649 44.000 0.00 0.00 0.00 3.85
1119 1290 6.401394 TCTTCAGCTGGATAATATGGATTCG 58.599 40.000 15.13 0.00 0.00 3.34
1152 1323 1.918609 GTCCGTCTCGTTATCAAGCAC 59.081 52.381 0.00 0.00 0.00 4.40
1165 1336 8.440059 TCGTTATCAAGCACAAAATGTAAGTAG 58.560 33.333 0.00 0.00 0.00 2.57
1169 1340 7.744087 TCAAGCACAAAATGTAAGTAGTCAT 57.256 32.000 0.00 0.00 0.00 3.06
1205 1520 1.064906 AGCAGTGCTGGCTCATTATGT 60.065 47.619 18.98 0.00 36.81 2.29
1257 1573 8.420374 TGTTCTAGCTATTTTACTGCATGTAC 57.580 34.615 0.00 0.00 0.00 2.90
1334 1793 1.664016 GCATTGTTGTGCTGTTCTCGG 60.664 52.381 0.00 0.00 41.82 4.63
1358 1817 0.099436 GATTGCAATGGCGTGGTCTC 59.901 55.000 18.59 0.00 45.35 3.36
1458 1937 1.070821 CAGCCATATACATCCGTGCG 58.929 55.000 0.00 0.00 0.00 5.34
1474 1953 4.155099 TCCGTGCGAAATATGTTTGACATT 59.845 37.500 0.00 0.00 39.88 2.71
1490 1979 8.536175 TGTTTGACATTCTATGTATGACTACCA 58.464 33.333 0.00 0.00 45.03 3.25
1597 2114 8.812513 ATCATCAATATTTCTTGTCTCCACAA 57.187 30.769 0.00 0.00 40.40 3.33
2524 3153 2.874701 CCCTGTATTGCTGGAGATTTCG 59.125 50.000 0.00 0.00 38.33 3.46
2645 3276 9.887629 TTTTGCATCATAAACATTATGACCAAT 57.112 25.926 13.39 0.00 36.84 3.16
2786 3417 2.035961 GCTGGCCAAGTATCATCGTCTA 59.964 50.000 7.01 0.00 0.00 2.59
3109 3740 8.453320 CAGACATCAAATAGCACTGTATCAAAA 58.547 33.333 0.00 0.00 0.00 2.44
3349 3980 6.149973 GCAATGCTAGCAATAACATGGAGATA 59.850 38.462 23.54 0.00 0.00 1.98
3467 4098 1.139853 ACATCGAGATGAAGGAAGGGC 59.860 52.381 18.76 0.00 41.20 5.19
3512 4143 3.370366 CGAGATGAAGGACTCAAAGCTTG 59.630 47.826 0.00 0.00 37.67 4.01
3524 4155 1.201647 CAAAGCTTGGCTCAGTGGATG 59.798 52.381 0.00 0.00 38.25 3.51
3537 4168 5.505324 GCTCAGTGGATGAAACATCATTAGC 60.505 44.000 12.66 9.66 37.52 3.09
3586 4217 3.551846 AGGGGGTTCAATACTTTATGCG 58.448 45.455 0.00 0.00 0.00 4.73
3591 4222 5.277828 GGGGTTCAATACTTTATGCGCTAAG 60.278 44.000 9.73 12.12 0.00 2.18
3642 4273 9.313118 GAAAAGTTTGAACCAACATATTTGTCT 57.687 29.630 0.00 0.00 34.06 3.41
3660 4291 2.359230 GGTGAGTGCAGAGCCCAC 60.359 66.667 0.00 0.00 0.00 4.61
4296 4982 7.676468 AGATATGTGCCCTTTTTAACCCTAAAA 59.324 33.333 0.00 0.00 35.63 1.52
4305 4991 7.213678 CCTTTTTAACCCTAAAATTGCAGACA 58.786 34.615 0.00 0.00 36.97 3.41
4380 5066 5.409826 GGAGATATAATTTTGCCGGAGTCAG 59.590 44.000 5.05 0.00 0.00 3.51
4552 5238 8.068977 GTGATTATCCTGTAGACTTGTAGTACG 58.931 40.741 0.00 0.00 0.00 3.67
4764 5459 9.702253 AGTTCAGTATCTATATATAGGTGGGTG 57.298 37.037 17.81 10.85 0.00 4.61
4920 5655 9.214953 CGATAGAAGAATTGTGAAAACAATAGC 57.785 33.333 4.62 1.53 37.58 2.97
5632 6492 0.099436 CTTGCCCATCTACAAAGCGC 59.901 55.000 0.00 0.00 0.00 5.92
5811 6671 2.751806 CCAGAACTTGATCAAGAAGGCC 59.248 50.000 36.15 20.35 40.79 5.19
5972 6835 5.792741 ACTCCTTGAGAAGAAAGATGACAG 58.207 41.667 0.00 0.00 33.32 3.51
6132 6995 6.848562 AATCCCCCTCTCAGTATAATGTTT 57.151 37.500 0.00 0.00 0.00 2.83
6393 7259 9.809096 TTGTAGAATGAATCTTCTGTGATAGTC 57.191 33.333 5.59 0.00 39.71 2.59
6491 7451 1.413077 CTAGTGCCTAGGCCCTTGTAC 59.587 57.143 30.81 20.18 41.09 2.90
6498 7458 2.116238 CTAGGCCCTTGTACCTAGCAA 58.884 52.381 0.00 0.00 46.71 3.91
6683 7653 0.107508 TGCCATGCAGAGGAGCTAAC 60.108 55.000 11.90 0.00 33.32 2.34
6700 7670 2.861147 AACTGCTCCACTAAAGGACC 57.139 50.000 0.00 0.00 33.19 4.46
7199 8181 2.601763 GACGGAGCAACAAGTATTACCG 59.398 50.000 0.00 0.00 43.79 4.02
7205 8187 6.047231 GGAGCAACAAGTATTACCGAACTAT 58.953 40.000 0.00 0.00 0.00 2.12
7493 8486 9.474920 TTGTGTGTTTCTTGGAATATGATTTTC 57.525 29.630 0.00 0.00 0.00 2.29
7510 8503 1.808411 TTCGGTGGCATCAGTTCTTC 58.192 50.000 0.00 0.00 0.00 2.87
7547 8540 6.079424 TGCACCATTACTTTTTACTTGACC 57.921 37.500 0.00 0.00 0.00 4.02
7599 8592 3.009723 GGTGCTTACTGCTTATGCTCAA 58.990 45.455 1.96 0.00 43.37 3.02
7695 8688 6.758416 GGATATTCCTTGTTTTGGATTTCTGC 59.242 38.462 0.00 0.00 32.53 4.26
7701 8694 3.215151 TGTTTTGGATTTCTGCGTGGTA 58.785 40.909 0.00 0.00 0.00 3.25
7774 8767 8.579850 TGTTGATATTTTCAAAGCAGGACTAT 57.420 30.769 0.00 0.00 45.71 2.12
7821 8814 2.772189 CTTCTGTGCTGCGCGTAC 59.228 61.111 8.43 8.22 0.00 3.67
7990 8983 2.481441 TCTGTTCCCAGATGCAGGTAT 58.519 47.619 0.00 0.00 42.80 2.73
7991 8984 3.653164 TCTGTTCCCAGATGCAGGTATA 58.347 45.455 0.00 0.00 42.80 1.47
8078 9079 3.578716 TCTCGGGGTTTCTGATGATATCC 59.421 47.826 0.00 0.00 0.00 2.59
8080 9081 3.578716 TCGGGGTTTCTGATGATATCCTC 59.421 47.826 0.00 0.25 0.00 3.71
8157 9158 4.601794 CTGGGCCACCTTGTGCCA 62.602 66.667 0.00 0.00 37.76 4.92
8689 9693 2.126882 ACCCCTCAAGCTGCATATACA 58.873 47.619 1.02 0.00 0.00 2.29
8729 9733 9.241919 TCTGCATTTGTTCATAATCTCCTTTTA 57.758 29.630 0.00 0.00 0.00 1.52
8870 9919 7.949903 TCAAGAACATGAAATGGTTCAAATG 57.050 32.000 0.00 3.84 46.57 2.32
8905 9954 5.591877 CCAAATAAGGCACTAGAATCAAGCT 59.408 40.000 0.00 0.00 38.49 3.74
8906 9955 6.096001 CCAAATAAGGCACTAGAATCAAGCTT 59.904 38.462 0.00 0.00 38.49 3.74
8909 9958 8.443953 AATAAGGCACTAGAATCAAGCTTTAG 57.556 34.615 0.00 0.00 38.49 1.85
8914 9983 5.877564 GCACTAGAATCAAGCTTTAGGAAGT 59.122 40.000 0.00 0.00 35.25 3.01
8919 9988 6.538263 AGAATCAAGCTTTAGGAAGTGTTCT 58.462 36.000 0.00 0.00 35.25 3.01
8930 9999 3.072184 AGGAAGTGTTCTCAAGTGCTCAT 59.928 43.478 0.00 0.00 0.00 2.90
8938 10007 2.902486 TCTCAAGTGCTCATCAAGACCT 59.098 45.455 0.00 0.00 0.00 3.85
8965 10034 4.096833 TGGATCATGTTTGCACTATGCTTC 59.903 41.667 2.02 0.00 45.31 3.86
9055 10197 1.180029 GCTCATGGCCATTGACAACT 58.820 50.000 17.92 0.00 34.27 3.16
9087 10229 0.106819 GGGACATCTCCAGCAGCAAT 60.107 55.000 0.00 0.00 38.52 3.56
9092 10234 3.428532 ACATCTCCAGCAGCAATCTTTT 58.571 40.909 0.00 0.00 0.00 2.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 2.547123 TTACTGGGGAGGAGGAGGCC 62.547 65.000 0.00 0.00 0.00 5.19
42 43 1.003051 TTACTGGGGAGGAGGAGGC 59.997 63.158 0.00 0.00 0.00 4.70
43 44 1.051556 GCTTACTGGGGAGGAGGAGG 61.052 65.000 0.00 0.00 0.00 4.30
44 45 1.051556 GGCTTACTGGGGAGGAGGAG 61.052 65.000 0.00 0.00 0.00 3.69
45 46 1.003051 GGCTTACTGGGGAGGAGGA 59.997 63.158 0.00 0.00 0.00 3.71
46 47 2.073101 GGGCTTACTGGGGAGGAGG 61.073 68.421 0.00 0.00 0.00 4.30
47 48 2.073101 GGGGCTTACTGGGGAGGAG 61.073 68.421 0.00 0.00 0.00 3.69
48 49 2.042261 GGGGCTTACTGGGGAGGA 59.958 66.667 0.00 0.00 0.00 3.71
49 50 3.097162 GGGGGCTTACTGGGGAGG 61.097 72.222 0.00 0.00 0.00 4.30
50 51 3.480133 CGGGGGCTTACTGGGGAG 61.480 72.222 0.00 0.00 0.00 4.30
128 129 4.087892 CTCACCAGACCAGCGGGG 62.088 72.222 8.08 1.20 44.81 5.73
129 130 4.767255 GCTCACCAGACCAGCGGG 62.767 72.222 0.00 0.00 41.29 6.13
130 131 4.767255 GGCTCACCAGACCAGCGG 62.767 72.222 0.00 0.00 33.66 5.52
132 133 4.767255 CCGGCTCACCAGACCAGC 62.767 72.222 0.00 0.00 34.57 4.85
133 134 3.314331 ACCGGCTCACCAGACCAG 61.314 66.667 0.00 0.00 34.57 4.00
134 135 3.625897 CACCGGCTCACCAGACCA 61.626 66.667 0.00 0.00 34.57 4.02
135 136 4.394712 CCACCGGCTCACCAGACC 62.395 72.222 0.00 0.00 34.57 3.85
154 155 1.948721 ATAACGGTTCGGTCGGGGAC 61.949 60.000 0.00 0.00 0.00 4.46
155 156 1.666209 GATAACGGTTCGGTCGGGGA 61.666 60.000 0.00 0.00 0.00 4.81
156 157 1.227060 GATAACGGTTCGGTCGGGG 60.227 63.158 0.00 0.00 0.00 5.73
157 158 1.587088 CGATAACGGTTCGGTCGGG 60.587 63.158 0.00 0.00 35.72 5.14
158 159 0.863119 GACGATAACGGTTCGGTCGG 60.863 60.000 19.91 8.48 44.46 4.79
159 160 0.097674 AGACGATAACGGTTCGGTCG 59.902 55.000 16.49 16.49 44.46 4.79
160 161 1.135575 ACAGACGATAACGGTTCGGTC 60.136 52.381 7.11 8.45 44.46 4.79
161 162 0.883833 ACAGACGATAACGGTTCGGT 59.116 50.000 7.11 0.00 44.46 4.69
162 163 1.986698 AACAGACGATAACGGTTCGG 58.013 50.000 7.11 0.00 44.46 4.30
163 164 4.379374 AAAAACAGACGATAACGGTTCG 57.621 40.909 0.00 0.00 44.46 3.95
203 204 9.953565 TCGGCTAAGGCAAAATAGTATTATTAT 57.046 29.630 0.00 0.00 40.87 1.28
204 205 9.781633 TTCGGCTAAGGCAAAATAGTATTATTA 57.218 29.630 0.00 0.00 40.87 0.98
205 206 8.565416 GTTCGGCTAAGGCAAAATAGTATTATT 58.435 33.333 0.00 0.00 40.87 1.40
206 207 7.174426 GGTTCGGCTAAGGCAAAATAGTATTAT 59.826 37.037 0.00 0.00 40.87 1.28
207 208 6.484308 GGTTCGGCTAAGGCAAAATAGTATTA 59.516 38.462 0.00 0.00 40.87 0.98
208 209 5.298527 GGTTCGGCTAAGGCAAAATAGTATT 59.701 40.000 0.00 0.00 40.87 1.89
209 210 4.820173 GGTTCGGCTAAGGCAAAATAGTAT 59.180 41.667 0.00 0.00 40.87 2.12
210 211 4.080751 AGGTTCGGCTAAGGCAAAATAGTA 60.081 41.667 0.00 0.00 40.87 1.82
211 212 3.014623 GGTTCGGCTAAGGCAAAATAGT 58.985 45.455 0.00 0.00 40.87 2.12
212 213 3.279434 AGGTTCGGCTAAGGCAAAATAG 58.721 45.455 0.00 0.00 40.87 1.73
213 214 3.359695 AGGTTCGGCTAAGGCAAAATA 57.640 42.857 0.00 0.00 40.87 1.40
214 215 2.215942 AGGTTCGGCTAAGGCAAAAT 57.784 45.000 0.00 0.00 40.87 1.82
215 216 2.863132 TAGGTTCGGCTAAGGCAAAA 57.137 45.000 0.00 0.00 40.87 2.44
216 217 2.237643 TCATAGGTTCGGCTAAGGCAAA 59.762 45.455 0.00 0.00 40.87 3.68
217 218 1.834896 TCATAGGTTCGGCTAAGGCAA 59.165 47.619 0.00 0.00 40.87 4.52
218 219 1.491668 TCATAGGTTCGGCTAAGGCA 58.508 50.000 0.00 0.00 40.87 4.75
219 220 2.224305 ACATCATAGGTTCGGCTAAGGC 60.224 50.000 0.00 0.00 37.82 4.35
220 221 3.393800 CACATCATAGGTTCGGCTAAGG 58.606 50.000 0.00 0.00 0.00 2.69
221 222 2.802816 GCACATCATAGGTTCGGCTAAG 59.197 50.000 0.00 0.00 0.00 2.18
222 223 2.434336 AGCACATCATAGGTTCGGCTAA 59.566 45.455 0.00 0.00 0.00 3.09
223 224 2.039418 AGCACATCATAGGTTCGGCTA 58.961 47.619 0.00 0.00 0.00 3.93
224 225 0.833287 AGCACATCATAGGTTCGGCT 59.167 50.000 0.00 0.00 0.00 5.52
225 226 1.331756 CAAGCACATCATAGGTTCGGC 59.668 52.381 0.00 0.00 0.00 5.54
226 227 2.632377 ACAAGCACATCATAGGTTCGG 58.368 47.619 0.00 0.00 0.00 4.30
227 228 3.935203 AGAACAAGCACATCATAGGTTCG 59.065 43.478 0.00 0.00 38.45 3.95
228 229 4.033358 CGAGAACAAGCACATCATAGGTTC 59.967 45.833 0.00 0.00 34.82 3.62
229 230 3.935203 CGAGAACAAGCACATCATAGGTT 59.065 43.478 0.00 0.00 0.00 3.50
230 231 3.195610 TCGAGAACAAGCACATCATAGGT 59.804 43.478 0.00 0.00 0.00 3.08
231 232 3.553511 GTCGAGAACAAGCACATCATAGG 59.446 47.826 0.00 0.00 0.00 2.57
232 233 4.267214 CAGTCGAGAACAAGCACATCATAG 59.733 45.833 0.00 0.00 0.00 2.23
233 234 4.176271 CAGTCGAGAACAAGCACATCATA 58.824 43.478 0.00 0.00 0.00 2.15
234 235 2.998670 CAGTCGAGAACAAGCACATCAT 59.001 45.455 0.00 0.00 0.00 2.45
235 236 2.407090 CAGTCGAGAACAAGCACATCA 58.593 47.619 0.00 0.00 0.00 3.07
236 237 1.728971 CCAGTCGAGAACAAGCACATC 59.271 52.381 0.00 0.00 0.00 3.06
237 238 1.800805 CCAGTCGAGAACAAGCACAT 58.199 50.000 0.00 0.00 0.00 3.21
238 239 0.880278 GCCAGTCGAGAACAAGCACA 60.880 55.000 0.00 0.00 0.00 4.57
239 240 1.862806 GCCAGTCGAGAACAAGCAC 59.137 57.895 0.00 0.00 0.00 4.40
240 241 1.664649 CGCCAGTCGAGAACAAGCA 60.665 57.895 0.00 0.00 41.67 3.91
241 242 2.383527 CCGCCAGTCGAGAACAAGC 61.384 63.158 0.00 0.00 41.67 4.01
242 243 2.383527 GCCGCCAGTCGAGAACAAG 61.384 63.158 0.00 0.00 41.67 3.16
243 244 2.357034 GCCGCCAGTCGAGAACAA 60.357 61.111 0.00 0.00 41.67 2.83
244 245 3.303135 AGCCGCCAGTCGAGAACA 61.303 61.111 0.00 0.00 41.67 3.18
245 246 2.811317 CAGCCGCCAGTCGAGAAC 60.811 66.667 0.00 0.00 41.67 3.01
246 247 4.742201 GCAGCCGCCAGTCGAGAA 62.742 66.667 0.00 0.00 41.67 2.87
263 264 0.035317 TAGATAGGCATTGCGGGCAG 59.965 55.000 1.91 0.00 35.46 4.85
264 265 0.692476 ATAGATAGGCATTGCGGGCA 59.308 50.000 1.91 0.00 35.46 5.36
265 266 1.339055 TGATAGATAGGCATTGCGGGC 60.339 52.381 1.91 0.00 0.00 6.13
266 267 2.027745 ACTGATAGATAGGCATTGCGGG 60.028 50.000 1.91 0.00 0.00 6.13
267 268 2.998670 CACTGATAGATAGGCATTGCGG 59.001 50.000 1.91 0.00 0.00 5.69
268 269 3.657634 ACACTGATAGATAGGCATTGCG 58.342 45.455 1.91 0.00 0.00 4.85
269 270 5.049818 GTGAACACTGATAGATAGGCATTGC 60.050 44.000 0.00 0.00 0.00 3.56
270 271 6.051074 TGTGAACACTGATAGATAGGCATTG 58.949 40.000 6.51 0.00 0.00 2.82
271 272 6.239217 TGTGAACACTGATAGATAGGCATT 57.761 37.500 6.51 0.00 0.00 3.56
272 273 5.876651 TGTGAACACTGATAGATAGGCAT 57.123 39.130 6.51 0.00 0.00 4.40
273 274 5.453762 CCATGTGAACACTGATAGATAGGCA 60.454 44.000 6.51 0.00 0.00 4.75
274 275 4.993584 CCATGTGAACACTGATAGATAGGC 59.006 45.833 6.51 0.00 0.00 3.93
275 276 4.993584 GCCATGTGAACACTGATAGATAGG 59.006 45.833 6.51 0.00 0.00 2.57
276 277 5.604565 TGCCATGTGAACACTGATAGATAG 58.395 41.667 6.51 0.00 0.00 2.08
277 278 5.612725 TGCCATGTGAACACTGATAGATA 57.387 39.130 6.51 0.00 0.00 1.98
278 279 4.492494 TGCCATGTGAACACTGATAGAT 57.508 40.909 6.51 0.00 0.00 1.98
279 280 3.979101 TGCCATGTGAACACTGATAGA 57.021 42.857 6.51 0.00 0.00 1.98
280 281 5.124297 TGAAATGCCATGTGAACACTGATAG 59.876 40.000 6.51 0.00 0.00 2.08
281 282 5.008980 TGAAATGCCATGTGAACACTGATA 58.991 37.500 6.51 0.00 0.00 2.15
282 283 3.827876 TGAAATGCCATGTGAACACTGAT 59.172 39.130 6.51 0.00 0.00 2.90
283 284 3.220940 TGAAATGCCATGTGAACACTGA 58.779 40.909 6.51 0.00 0.00 3.41
284 285 3.646611 TGAAATGCCATGTGAACACTG 57.353 42.857 6.51 2.84 0.00 3.66
285 286 5.680408 GCATATGAAATGCCATGTGAACACT 60.680 40.000 6.97 0.00 37.71 3.55
286 287 4.505191 GCATATGAAATGCCATGTGAACAC 59.495 41.667 6.97 0.00 37.71 3.32
287 288 4.684877 GCATATGAAATGCCATGTGAACA 58.315 39.130 6.97 0.00 37.71 3.18
297 298 6.814506 ATCTAAGTCTGGCATATGAAATGC 57.185 37.500 6.97 1.33 43.85 3.56
298 299 8.387190 TGAATCTAAGTCTGGCATATGAAATG 57.613 34.615 6.97 0.00 0.00 2.32
299 300 9.584008 AATGAATCTAAGTCTGGCATATGAAAT 57.416 29.630 6.97 0.00 0.00 2.17
300 301 8.843262 CAATGAATCTAAGTCTGGCATATGAAA 58.157 33.333 6.97 0.00 0.00 2.69
301 302 7.040892 GCAATGAATCTAAGTCTGGCATATGAA 60.041 37.037 6.97 0.00 0.00 2.57
302 303 6.429078 GCAATGAATCTAAGTCTGGCATATGA 59.571 38.462 6.97 0.00 0.00 2.15
303 304 6.206048 TGCAATGAATCTAAGTCTGGCATATG 59.794 38.462 0.00 0.00 0.00 1.78
304 305 6.301486 TGCAATGAATCTAAGTCTGGCATAT 58.699 36.000 0.00 0.00 0.00 1.78
305 306 5.683681 TGCAATGAATCTAAGTCTGGCATA 58.316 37.500 0.00 0.00 0.00 3.14
306 307 4.529897 TGCAATGAATCTAAGTCTGGCAT 58.470 39.130 0.00 0.00 0.00 4.40
307 308 3.943381 CTGCAATGAATCTAAGTCTGGCA 59.057 43.478 0.00 0.00 0.00 4.92
308 309 3.944015 ACTGCAATGAATCTAAGTCTGGC 59.056 43.478 0.00 0.00 0.00 4.85
309 310 4.334759 CCACTGCAATGAATCTAAGTCTGG 59.665 45.833 0.00 0.00 0.00 3.86
310 311 4.201891 GCCACTGCAATGAATCTAAGTCTG 60.202 45.833 0.00 0.00 37.47 3.51
311 312 3.944015 GCCACTGCAATGAATCTAAGTCT 59.056 43.478 0.00 0.00 37.47 3.24
312 313 3.242543 CGCCACTGCAATGAATCTAAGTC 60.243 47.826 0.00 0.00 37.32 3.01
313 314 2.679837 CGCCACTGCAATGAATCTAAGT 59.320 45.455 0.00 0.00 37.32 2.24
314 315 2.938451 TCGCCACTGCAATGAATCTAAG 59.062 45.455 0.00 0.00 37.32 2.18
315 316 2.677836 GTCGCCACTGCAATGAATCTAA 59.322 45.455 0.00 0.00 37.32 2.10
316 317 2.279741 GTCGCCACTGCAATGAATCTA 58.720 47.619 0.00 0.00 37.32 1.98
317 318 1.089920 GTCGCCACTGCAATGAATCT 58.910 50.000 0.00 0.00 37.32 2.40
318 319 0.099436 GGTCGCCACTGCAATGAATC 59.901 55.000 0.00 0.00 37.32 2.52
319 320 0.322816 AGGTCGCCACTGCAATGAAT 60.323 50.000 0.00 0.00 37.32 2.57
320 321 0.537143 AAGGTCGCCACTGCAATGAA 60.537 50.000 0.00 0.00 37.32 2.57
321 322 1.073025 AAGGTCGCCACTGCAATGA 59.927 52.632 0.00 0.00 37.32 2.57
322 323 1.210931 CAAGGTCGCCACTGCAATG 59.789 57.895 0.00 0.00 37.32 2.82
323 324 1.973281 CCAAGGTCGCCACTGCAAT 60.973 57.895 0.00 0.00 37.32 3.56
324 325 2.594303 CCAAGGTCGCCACTGCAA 60.594 61.111 0.00 0.00 37.32 4.08
325 326 3.872603 ACCAAGGTCGCCACTGCA 61.873 61.111 0.00 0.00 37.32 4.41
326 327 3.357079 CACCAAGGTCGCCACTGC 61.357 66.667 0.00 0.00 0.00 4.40
327 328 1.101049 AAACACCAAGGTCGCCACTG 61.101 55.000 0.00 0.00 0.00 3.66
328 329 0.470766 TAAACACCAAGGTCGCCACT 59.529 50.000 0.00 0.00 0.00 4.00
329 330 0.589708 GTAAACACCAAGGTCGCCAC 59.410 55.000 0.00 0.00 0.00 5.01
330 331 0.470766 AGTAAACACCAAGGTCGCCA 59.529 50.000 0.00 0.00 0.00 5.69
331 332 0.872388 CAGTAAACACCAAGGTCGCC 59.128 55.000 0.00 0.00 0.00 5.54
332 333 1.589803 ACAGTAAACACCAAGGTCGC 58.410 50.000 0.00 0.00 0.00 5.19
333 334 4.625972 AAAACAGTAAACACCAAGGTCG 57.374 40.909 0.00 0.00 0.00 4.79
355 356 4.795268 TGCGTTTGTACTGTGTTGAAAAA 58.205 34.783 0.00 0.00 0.00 1.94
356 357 4.421033 TGCGTTTGTACTGTGTTGAAAA 57.579 36.364 0.00 0.00 0.00 2.29
357 358 4.407818 CTTGCGTTTGTACTGTGTTGAAA 58.592 39.130 0.00 0.00 0.00 2.69
358 359 3.729462 GCTTGCGTTTGTACTGTGTTGAA 60.729 43.478 0.00 0.00 0.00 2.69
359 360 2.223157 GCTTGCGTTTGTACTGTGTTGA 60.223 45.455 0.00 0.00 0.00 3.18
360 361 2.108700 GCTTGCGTTTGTACTGTGTTG 58.891 47.619 0.00 0.00 0.00 3.33
361 362 1.740585 TGCTTGCGTTTGTACTGTGTT 59.259 42.857 0.00 0.00 0.00 3.32
362 363 1.063469 GTGCTTGCGTTTGTACTGTGT 59.937 47.619 0.00 0.00 0.00 3.72
363 364 1.330521 AGTGCTTGCGTTTGTACTGTG 59.669 47.619 0.00 0.00 0.00 3.66
364 365 1.597663 GAGTGCTTGCGTTTGTACTGT 59.402 47.619 0.00 0.00 29.71 3.55
365 366 1.597195 TGAGTGCTTGCGTTTGTACTG 59.403 47.619 0.00 0.00 29.71 2.74
366 367 1.948104 TGAGTGCTTGCGTTTGTACT 58.052 45.000 0.00 0.00 32.11 2.73
367 368 2.969443 ATGAGTGCTTGCGTTTGTAC 57.031 45.000 0.00 0.00 0.00 2.90
368 369 6.981559 TGTATATATGAGTGCTTGCGTTTGTA 59.018 34.615 0.00 0.00 0.00 2.41
369 370 5.815222 TGTATATATGAGTGCTTGCGTTTGT 59.185 36.000 0.00 0.00 0.00 2.83
370 371 6.129393 GTGTATATATGAGTGCTTGCGTTTG 58.871 40.000 0.00 0.00 0.00 2.93
371 372 5.051039 CGTGTATATATGAGTGCTTGCGTTT 60.051 40.000 0.00 0.00 0.00 3.60
372 373 4.444388 CGTGTATATATGAGTGCTTGCGTT 59.556 41.667 0.00 0.00 0.00 4.84
373 374 3.981416 CGTGTATATATGAGTGCTTGCGT 59.019 43.478 0.00 0.00 0.00 5.24
374 375 3.181540 GCGTGTATATATGAGTGCTTGCG 60.182 47.826 0.00 0.00 0.00 4.85
375 376 3.740832 TGCGTGTATATATGAGTGCTTGC 59.259 43.478 0.00 0.00 0.00 4.01
376 377 6.586082 TGTATGCGTGTATATATGAGTGCTTG 59.414 38.462 0.00 0.00 0.00 4.01
377 378 6.586463 GTGTATGCGTGTATATATGAGTGCTT 59.414 38.462 0.00 0.00 0.00 3.91
378 379 6.071896 AGTGTATGCGTGTATATATGAGTGCT 60.072 38.462 0.00 0.00 0.00 4.40
379 380 6.093404 AGTGTATGCGTGTATATATGAGTGC 58.907 40.000 0.00 0.00 0.00 4.40
380 381 6.466097 CGAGTGTATGCGTGTATATATGAGTG 59.534 42.308 0.00 0.00 0.00 3.51
381 382 6.543736 CGAGTGTATGCGTGTATATATGAGT 58.456 40.000 0.00 0.00 0.00 3.41
382 383 5.452623 GCGAGTGTATGCGTGTATATATGAG 59.547 44.000 0.00 0.00 0.00 2.90
383 384 5.329493 GCGAGTGTATGCGTGTATATATGA 58.671 41.667 0.00 0.00 0.00 2.15
384 385 4.499399 GGCGAGTGTATGCGTGTATATATG 59.501 45.833 0.00 0.00 0.00 1.78
385 386 4.669318 GGCGAGTGTATGCGTGTATATAT 58.331 43.478 0.00 0.00 0.00 0.86
386 387 3.425227 CGGCGAGTGTATGCGTGTATATA 60.425 47.826 0.00 0.00 0.00 0.86
387 388 2.667448 CGGCGAGTGTATGCGTGTATAT 60.667 50.000 0.00 0.00 0.00 0.86
388 389 1.334329 CGGCGAGTGTATGCGTGTATA 60.334 52.381 0.00 0.00 0.00 1.47
389 390 0.594028 CGGCGAGTGTATGCGTGTAT 60.594 55.000 0.00 0.00 0.00 2.29
390 391 1.226463 CGGCGAGTGTATGCGTGTA 60.226 57.895 0.00 0.00 0.00 2.90
391 392 2.506217 CGGCGAGTGTATGCGTGT 60.506 61.111 0.00 0.00 0.00 4.49
392 393 2.202557 TCGGCGAGTGTATGCGTG 60.203 61.111 4.99 0.00 0.00 5.34
393 394 2.202570 GTCGGCGAGTGTATGCGT 60.203 61.111 11.20 0.00 0.00 5.24
394 395 2.884087 AAGGTCGGCGAGTGTATGCG 62.884 60.000 11.20 0.00 0.00 4.73
395 396 1.153628 AAGGTCGGCGAGTGTATGC 60.154 57.895 11.20 0.00 0.00 3.14
396 397 0.806102 CCAAGGTCGGCGAGTGTATG 60.806 60.000 11.20 5.47 0.00 2.39
397 398 1.255667 ACCAAGGTCGGCGAGTGTAT 61.256 55.000 11.20 0.00 0.00 2.29
398 399 1.904865 ACCAAGGTCGGCGAGTGTA 60.905 57.895 11.20 0.00 0.00 2.90
399 400 3.231736 ACCAAGGTCGGCGAGTGT 61.232 61.111 11.20 0.00 0.00 3.55
400 401 2.738521 CACCAAGGTCGGCGAGTG 60.739 66.667 11.20 11.11 0.00 3.51
401 402 2.319890 AAACACCAAGGTCGGCGAGT 62.320 55.000 11.20 0.15 0.00 4.18
402 403 0.320073 TAAACACCAAGGTCGGCGAG 60.320 55.000 11.20 0.00 0.00 5.03
403 404 0.600782 GTAAACACCAAGGTCGGCGA 60.601 55.000 4.99 4.99 0.00 5.54
404 405 0.601841 AGTAAACACCAAGGTCGGCG 60.602 55.000 0.00 0.00 0.00 6.46
405 406 0.872388 CAGTAAACACCAAGGTCGGC 59.128 55.000 0.00 0.00 0.00 5.54
406 407 2.249844 ACAGTAAACACCAAGGTCGG 57.750 50.000 0.00 0.00 0.00 4.79
407 408 4.210537 CACTAACAGTAAACACCAAGGTCG 59.789 45.833 0.00 0.00 0.00 4.79
408 409 5.121105 ACACTAACAGTAAACACCAAGGTC 58.879 41.667 0.00 0.00 0.00 3.85
409 410 5.106876 ACACTAACAGTAAACACCAAGGT 57.893 39.130 0.00 0.00 0.00 3.50
410 411 7.739498 ATTACACTAACAGTAAACACCAAGG 57.261 36.000 0.00 0.00 35.33 3.61
411 412 7.589954 GCAATTACACTAACAGTAAACACCAAG 59.410 37.037 0.00 0.00 35.33 3.61
412 413 7.067129 TGCAATTACACTAACAGTAAACACCAA 59.933 33.333 0.00 0.00 35.33 3.67
413 414 6.542735 TGCAATTACACTAACAGTAAACACCA 59.457 34.615 0.00 0.00 35.33 4.17
414 415 6.961576 TGCAATTACACTAACAGTAAACACC 58.038 36.000 0.00 0.00 35.33 4.16
415 416 9.458374 AAATGCAATTACACTAACAGTAAACAC 57.542 29.630 0.00 0.00 33.67 3.32
422 423 9.472995 CGTACTAAAATGCAATTACACTAACAG 57.527 33.333 0.00 0.00 33.67 3.16
423 424 8.991026 ACGTACTAAAATGCAATTACACTAACA 58.009 29.630 0.00 0.00 33.67 2.41
442 443 9.325150 GGCGTTATACGATAAAAATACGTACTA 57.675 33.333 0.00 0.00 46.05 1.82
443 444 7.059488 CGGCGTTATACGATAAAAATACGTACT 59.941 37.037 0.00 0.00 46.05 2.73
444 445 7.059033 TCGGCGTTATACGATAAAAATACGTAC 59.941 37.037 6.85 0.00 46.05 3.67
445 446 7.072647 TCGGCGTTATACGATAAAAATACGTA 58.927 34.615 6.85 0.00 46.05 3.57
446 447 5.912396 TCGGCGTTATACGATAAAAATACGT 59.088 36.000 6.85 0.00 46.05 3.57
447 448 6.361297 TCGGCGTTATACGATAAAAATACG 57.639 37.500 6.85 0.00 46.05 3.06
455 456 3.064408 CAGGCTATCGGCGTTATACGATA 59.936 47.826 6.85 6.61 46.78 2.92
456 457 2.089980 AGGCTATCGGCGTTATACGAT 58.910 47.619 6.85 4.92 46.05 3.73
457 458 1.198408 CAGGCTATCGGCGTTATACGA 59.802 52.381 6.85 0.00 46.05 3.43
458 459 1.198408 TCAGGCTATCGGCGTTATACG 59.802 52.381 6.85 0.00 45.88 3.06
459 460 3.179830 CATCAGGCTATCGGCGTTATAC 58.820 50.000 6.85 0.00 42.94 1.47
460 461 2.165641 CCATCAGGCTATCGGCGTTATA 59.834 50.000 6.85 0.00 42.94 0.98
461 462 1.066858 CCATCAGGCTATCGGCGTTAT 60.067 52.381 6.85 0.00 42.94 1.89
462 463 0.317160 CCATCAGGCTATCGGCGTTA 59.683 55.000 6.85 1.39 42.94 3.18
463 464 1.069765 CCATCAGGCTATCGGCGTT 59.930 57.895 6.85 0.00 42.94 4.84
464 465 1.188219 ATCCATCAGGCTATCGGCGT 61.188 55.000 6.85 0.00 42.94 5.68
465 466 0.459237 GATCCATCAGGCTATCGGCG 60.459 60.000 0.00 0.00 42.94 6.46
466 467 0.610174 TGATCCATCAGGCTATCGGC 59.390 55.000 0.00 0.00 40.90 5.54
467 468 2.498885 TGATGATCCATCAGGCTATCGG 59.501 50.000 5.61 0.00 44.60 4.18
468 469 3.881937 TGATGATCCATCAGGCTATCG 57.118 47.619 5.61 0.00 44.60 2.92
476 477 9.094128 ATTGCATGCAAGAATGATGATCCATCA 62.094 37.037 34.15 11.46 45.14 3.07
477 478 4.022329 TGCATGCAAGAATGATGATCCATC 60.022 41.667 20.30 0.00 40.88 3.51
478 479 3.895041 TGCATGCAAGAATGATGATCCAT 59.105 39.130 20.30 0.00 0.00 3.41
479 480 3.292460 TGCATGCAAGAATGATGATCCA 58.708 40.909 20.30 0.00 0.00 3.41
480 481 4.316205 TTGCATGCAAGAATGATGATCC 57.684 40.909 28.80 0.00 0.00 3.36
481 482 5.175673 CACATTGCATGCAAGAATGATGATC 59.824 40.000 34.15 0.00 39.47 2.92
482 483 5.049828 CACATTGCATGCAAGAATGATGAT 58.950 37.500 34.15 14.63 39.47 2.45
483 484 4.429108 CACATTGCATGCAAGAATGATGA 58.571 39.130 34.15 12.14 39.47 2.92
484 485 3.555547 CCACATTGCATGCAAGAATGATG 59.444 43.478 34.15 27.51 39.47 3.07
485 486 3.792401 CCACATTGCATGCAAGAATGAT 58.208 40.909 34.15 16.79 39.47 2.45
486 487 2.675603 GCCACATTGCATGCAAGAATGA 60.676 45.455 34.15 14.41 39.47 2.57
487 488 1.663643 GCCACATTGCATGCAAGAATG 59.336 47.619 34.15 28.79 39.47 2.67
488 489 1.553248 AGCCACATTGCATGCAAGAAT 59.447 42.857 34.15 20.81 39.47 2.40
494 495 1.269413 GGATACAGCCACATTGCATGC 60.269 52.381 11.82 11.82 0.00 4.06
498 499 2.368439 TGAAGGATACAGCCACATTGC 58.632 47.619 0.00 0.00 41.41 3.56
499 500 5.389859 TTTTGAAGGATACAGCCACATTG 57.610 39.130 0.00 0.00 41.41 2.82
505 506 5.885912 TGTAAGGATTTTGAAGGATACAGCC 59.114 40.000 0.00 0.00 41.41 4.85
512 513 8.827832 ATCATCATTGTAAGGATTTTGAAGGA 57.172 30.769 0.00 0.00 0.00 3.36
513 514 8.910944 AGATCATCATTGTAAGGATTTTGAAGG 58.089 33.333 0.00 0.00 0.00 3.46
542 543 0.588252 GGGTGCATGCATCGATACAC 59.412 55.000 25.64 6.98 0.00 2.90
545 546 1.543208 GGAAGGGTGCATGCATCGATA 60.543 52.381 25.64 0.00 0.00 2.92
548 549 1.314534 TTGGAAGGGTGCATGCATCG 61.315 55.000 25.64 0.00 0.00 3.84
556 557 1.134068 GGTAGGATCTTGGAAGGGTGC 60.134 57.143 0.00 0.00 0.00 5.01
558 559 2.972153 AGGTAGGATCTTGGAAGGGT 57.028 50.000 0.00 0.00 0.00 4.34
559 560 4.592997 AAAAGGTAGGATCTTGGAAGGG 57.407 45.455 0.00 0.00 0.00 3.95
560 561 4.950475 GGAAAAAGGTAGGATCTTGGAAGG 59.050 45.833 0.00 0.00 0.00 3.46
561 562 4.950475 GGGAAAAAGGTAGGATCTTGGAAG 59.050 45.833 0.00 0.00 0.00 3.46
562 563 4.606255 AGGGAAAAAGGTAGGATCTTGGAA 59.394 41.667 0.00 0.00 0.00 3.53
563 564 4.183916 AGGGAAAAAGGTAGGATCTTGGA 58.816 43.478 0.00 0.00 0.00 3.53
564 565 4.592997 AGGGAAAAAGGTAGGATCTTGG 57.407 45.455 0.00 0.00 0.00 3.61
576 577 6.640907 CGTTCATTGGTTAAGAAGGGAAAAAG 59.359 38.462 0.00 0.00 0.00 2.27
577 578 6.461788 CCGTTCATTGGTTAAGAAGGGAAAAA 60.462 38.462 7.19 0.00 45.39 1.94
578 579 5.010213 CCGTTCATTGGTTAAGAAGGGAAAA 59.990 40.000 7.19 0.00 45.39 2.29
582 583 2.163613 GCCGTTCATTGGTTAAGAAGGG 59.836 50.000 8.34 8.34 45.35 3.95
596 597 1.890041 CCAGAAACCACGCCGTTCA 60.890 57.895 0.00 0.00 0.00 3.18
601 602 1.875963 CATGACCAGAAACCACGCC 59.124 57.895 0.00 0.00 0.00 5.68
602 603 1.210155 GCATGACCAGAAACCACGC 59.790 57.895 0.00 0.00 0.00 5.34
604 605 1.317613 TGTGCATGACCAGAAACCAC 58.682 50.000 0.00 0.00 0.00 4.16
605 606 2.291209 ATGTGCATGACCAGAAACCA 57.709 45.000 0.00 0.00 0.00 3.67
606 607 4.989279 ATTATGTGCATGACCAGAAACC 57.011 40.909 0.00 0.00 0.00 3.27
607 608 5.801947 GTCAATTATGTGCATGACCAGAAAC 59.198 40.000 0.00 0.00 36.94 2.78
610 611 4.847198 AGTCAATTATGTGCATGACCAGA 58.153 39.130 11.31 0.00 42.39 3.86
611 612 5.819379 AGTAGTCAATTATGTGCATGACCAG 59.181 40.000 11.31 0.00 42.39 4.00
613 614 6.683974 AAGTAGTCAATTATGTGCATGACC 57.316 37.500 11.31 0.00 42.39 4.02
614 615 7.751732 TGAAAGTAGTCAATTATGTGCATGAC 58.248 34.615 7.62 7.62 41.88 3.06
616 617 7.646526 CCATGAAAGTAGTCAATTATGTGCATG 59.353 37.037 0.00 0.00 0.00 4.06
617 618 7.682741 GCCATGAAAGTAGTCAATTATGTGCAT 60.683 37.037 0.00 0.00 0.00 3.96
619 620 5.973565 GCCATGAAAGTAGTCAATTATGTGC 59.026 40.000 0.00 0.00 0.00 4.57
620 621 6.183360 ACGCCATGAAAGTAGTCAATTATGTG 60.183 38.462 0.00 0.00 0.00 3.21
621 622 5.880332 ACGCCATGAAAGTAGTCAATTATGT 59.120 36.000 0.00 0.00 0.00 2.29
622 623 6.194463 CACGCCATGAAAGTAGTCAATTATG 58.806 40.000 0.00 0.00 0.00 1.90
625 706 3.440173 CCACGCCATGAAAGTAGTCAATT 59.560 43.478 0.00 0.00 0.00 2.32
642 723 2.548920 CCCTCCTGAAATCTATCCACGC 60.549 54.545 0.00 0.00 0.00 5.34
645 726 2.775418 TGCCCTCCTGAAATCTATCCA 58.225 47.619 0.00 0.00 0.00 3.41
646 727 3.864789 TTGCCCTCCTGAAATCTATCC 57.135 47.619 0.00 0.00 0.00 2.59
647 728 6.721704 AAATTTGCCCTCCTGAAATCTATC 57.278 37.500 0.00 0.00 0.00 2.08
648 729 7.841222 AGTAAAATTTGCCCTCCTGAAATCTAT 59.159 33.333 0.00 0.00 0.00 1.98
669 750 5.295045 GGTTTCGTCACTTGGAAGAAGTAAA 59.705 40.000 0.00 0.00 43.32 2.01
679 760 1.202651 AGTCCTGGTTTCGTCACTTGG 60.203 52.381 0.00 0.00 0.00 3.61
687 768 4.164294 CGTAAACTCTAGTCCTGGTTTCG 58.836 47.826 0.00 0.00 34.40 3.46
708 789 1.129251 CCATGACTAACAGCAAGCACG 59.871 52.381 0.00 0.00 0.00 5.34
747 828 0.459489 TGTGCTGAAGTGGGTTTTGC 59.541 50.000 0.00 0.00 0.00 3.68
748 829 2.481795 CCTTGTGCTGAAGTGGGTTTTG 60.482 50.000 0.00 0.00 0.00 2.44
773 922 3.068024 ACCACCAACAAGCACATAAACTG 59.932 43.478 0.00 0.00 0.00 3.16
788 937 0.037447 TCCGCATGAATGACCACCAA 59.963 50.000 0.00 0.00 0.00 3.67
791 940 1.009829 GACTCCGCATGAATGACCAC 58.990 55.000 0.00 0.00 0.00 4.16
849 1000 5.068987 TGTGAAGAGGCATTTACAAAAGCTT 59.931 36.000 0.00 0.00 33.48 3.74
866 1035 2.819608 GGGCAAGCAACTAATGTGAAGA 59.180 45.455 0.00 0.00 0.00 2.87
947 1116 5.382616 TGAGTTAGTAACAGTCTGGTCAGA 58.617 41.667 15.28 0.00 34.56 3.27
952 1121 6.706270 ACATGTTTGAGTTAGTAACAGTCTGG 59.294 38.462 15.28 1.00 35.48 3.86
969 1140 4.852134 TCACTGGAAATCCACATGTTTG 57.148 40.909 0.00 0.00 42.01 2.93
1083 1254 1.400990 GCTGAAGAATTTGCGCTGCG 61.401 55.000 19.17 19.17 0.00 5.18
1119 1290 1.742324 GACGGACCGGGGAAGTATCC 61.742 65.000 20.00 0.00 45.77 2.59
1152 1323 6.814644 TCGGTGGTATGACTACTTACATTTTG 59.185 38.462 0.00 0.00 29.70 2.44
1165 1336 3.673809 GCTTTCGATATCGGTGGTATGAC 59.326 47.826 24.12 2.31 40.29 3.06
1169 1340 2.691526 ACTGCTTTCGATATCGGTGGTA 59.308 45.455 24.12 12.44 40.29 3.25
1334 1793 2.406616 ACGCCATTGCAATCGTCCC 61.407 57.895 17.57 1.89 37.32 4.46
1474 1953 6.071320 AGCACAGATGGTAGTCATACATAGA 58.929 40.000 0.00 0.00 35.97 1.98
1490 1979 6.183360 TGGGTTTCAAACAATAAAGCACAGAT 60.183 34.615 1.93 0.00 35.36 2.90
1578 2093 9.125026 GGATGTATTGTGGAGACAAGAAATATT 57.875 33.333 0.00 0.00 45.29 1.28
2024 2643 6.931840 AGAGAAAAGAACTAGGTGTTAGCAAG 59.068 38.462 0.00 0.00 39.30 4.01
2356 2982 6.757897 TGGTGCAAATCCTACTAAAATCAG 57.242 37.500 0.00 0.00 0.00 2.90
2524 3153 1.898574 CAGTTGGCACTCCACCACC 60.899 63.158 0.00 0.00 43.33 4.61
2618 3249 8.700722 TGGTCATAATGTTTATGATGCAAAAC 57.299 30.769 11.83 5.03 36.48 2.43
2645 3276 0.821301 TGAACATCGCCTGGCACAAA 60.821 50.000 20.29 0.70 38.70 2.83
2686 3317 0.813184 TGGAACTACCCGATGTCGAC 59.187 55.000 9.11 9.11 37.88 4.20
2786 3417 2.158769 TCCCGCATTCTCTGTATTGCAT 60.159 45.455 0.00 0.00 34.80 3.96
3109 3740 0.981943 CCGAAGTAGGGGAAGTTGGT 59.018 55.000 0.00 0.00 0.00 3.67
3349 3980 2.171448 AGCAGTCTCCGGCAATCTAATT 59.829 45.455 0.00 0.00 33.84 1.40
3467 4098 5.447683 CGATGTCACCATTTCCATAACACAG 60.448 44.000 0.00 0.00 0.00 3.66
3512 4143 2.715046 TGATGTTTCATCCACTGAGCC 58.285 47.619 7.18 0.00 34.68 4.70
3524 4155 3.075866 GCTGGCTGCTAATGATGTTTC 57.924 47.619 9.31 0.00 38.95 2.78
3537 4168 1.814394 TCATTGCAGTTAAGCTGGCTG 59.186 47.619 7.76 7.76 45.14 4.85
3555 4186 3.963476 TTGAACCCCCTCTTTTCTTCA 57.037 42.857 0.00 0.00 0.00 3.02
3642 4273 2.848679 TGGGCTCTGCACTCACCA 60.849 61.111 0.00 0.00 30.56 4.17
3660 4291 9.988815 ATTACAGTAATAGCAAACCTATGAGAG 57.011 33.333 3.79 0.00 36.86 3.20
4296 4982 1.004044 CTCCACCTCCTTGTCTGCAAT 59.996 52.381 0.00 0.00 33.65 3.56
4305 4991 3.134804 GCACATGTATACTCCACCTCCTT 59.865 47.826 0.00 0.00 0.00 3.36
4380 5066 5.300792 ACTCTAATGCTCCTAGAACAGTAGC 59.699 44.000 0.00 0.00 33.29 3.58
4552 5238 3.660865 ACTCATGGGACTTGTTTCGTAC 58.339 45.455 0.00 0.00 0.00 3.67
4865 5571 6.650807 AGTTGGCCATGAGTTATAATATGACG 59.349 38.462 6.09 0.00 0.00 4.35
5222 6078 9.614792 CTAAAAGTTAGCCCTCATTATGTACTT 57.385 33.333 0.00 0.00 0.00 2.24
5416 6272 1.547372 CTTCCCCACTTGCAGATTTGG 59.453 52.381 0.00 0.00 0.00 3.28
5632 6492 9.385902 GGATGACAATACAAAACATAATCATCG 57.614 33.333 0.00 0.00 40.41 3.84
5811 6671 3.682858 CCACAACTACACCATCCTTAACG 59.317 47.826 0.00 0.00 0.00 3.18
5972 6835 1.803555 GCTCTTTCTTCTGTGAGGTGC 59.196 52.381 0.00 0.00 0.00 5.01
6132 6995 7.604549 ACAATGAAAAATATGATGTCAGTGCA 58.395 30.769 8.52 0.00 37.71 4.57
6387 7252 8.627403 ACCAAATTCAATGTGATCATGACTATC 58.373 33.333 0.00 0.00 34.19 2.08
6393 7259 6.566141 TGCTACCAAATTCAATGTGATCATG 58.434 36.000 0.00 0.00 34.19 3.07
6634 7603 4.827284 AGGAAGAACAACCGAAACATCATT 59.173 37.500 0.00 0.00 0.00 2.57
6700 7670 1.164411 TTTGTTGTAGCTGGATGCCG 58.836 50.000 0.00 0.00 44.23 5.69
7199 8181 9.134055 ACAAAGGATACCTGTAGAGTATAGTTC 57.866 37.037 0.00 0.00 32.13 3.01
7205 8187 9.710818 AGAATTACAAAGGATACCTGTAGAGTA 57.289 33.333 0.00 0.00 36.90 2.59
7493 8486 0.798776 GTGAAGAACTGATGCCACCG 59.201 55.000 0.00 0.00 0.00 4.94
7599 8592 9.561069 ACAAAAGATACTATCAAGACAAACAGT 57.439 29.630 0.00 0.00 0.00 3.55
7695 8688 6.664515 ACAATTAATGAACACAACTACCACG 58.335 36.000 0.00 0.00 0.00 4.94
7774 8767 1.250328 CATGCACCAAAGCCTCAAGA 58.750 50.000 0.00 0.00 0.00 3.02
7821 8814 6.806249 TGTAAAACAGAGTTTGAAAGCACAAG 59.194 34.615 0.00 0.00 0.00 3.16
8040 9033 1.338579 CGAGAAAGGAAAGGAGCTGCT 60.339 52.381 0.00 0.00 0.00 4.24
8121 9122 3.991773 CCAGCAATCATTTTGGTCTTGTG 59.008 43.478 0.00 0.00 0.00 3.33
8157 9158 1.551452 GGGATCCGCTAGCACTCTAT 58.449 55.000 16.45 0.00 0.00 1.98
8327 9328 2.926779 TCTGCTGCTGGTGCCTCT 60.927 61.111 6.69 0.00 38.71 3.69
8413 9414 2.998316 GCTTCTGCTGGTATCTCCTT 57.002 50.000 0.00 0.00 37.07 3.36
8905 9954 5.036117 AGCACTTGAGAACACTTCCTAAA 57.964 39.130 0.00 0.00 0.00 1.85
8906 9955 4.100963 TGAGCACTTGAGAACACTTCCTAA 59.899 41.667 0.00 0.00 0.00 2.69
8909 9958 2.838736 TGAGCACTTGAGAACACTTCC 58.161 47.619 0.00 0.00 0.00 3.46
8914 9983 4.060900 GTCTTGATGAGCACTTGAGAACA 58.939 43.478 0.00 0.00 0.00 3.18
8919 9988 3.326006 AGAAGGTCTTGATGAGCACTTGA 59.674 43.478 0.42 0.00 44.98 3.02
8938 10007 5.393352 GCATAGTGCAAACATGATCCAAGAA 60.393 40.000 0.00 0.00 44.26 2.52
8965 10034 3.686045 GGGATCCCGCTAGAGCCG 61.686 72.222 17.02 0.00 43.53 5.52
8984 10053 2.103094 TCCATCATCCATCGAGTCCAAC 59.897 50.000 0.00 0.00 0.00 3.77
9055 10197 4.224370 GGAGATGTCCCACCTTACAACTAA 59.776 45.833 0.00 0.00 36.76 2.24
9079 10221 4.141869 ACCACTTTTCAAAAGATTGCTGCT 60.142 37.500 17.05 0.00 36.45 4.24
9087 10229 3.625764 CGAGGTCACCACTTTTCAAAAGA 59.374 43.478 17.05 0.00 0.00 2.52
9092 10234 2.992124 TTCGAGGTCACCACTTTTCA 57.008 45.000 0.00 0.00 0.00 2.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.