Multiple sequence alignment - TraesCS3A01G524700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G524700 chr3A 100.000 5548 0 0 2968 8515 739382085 739376538 0.000000e+00 10246.0
1 TraesCS3A01G524700 chr3A 100.000 2345 0 0 1 2345 739385052 739382708 0.000000e+00 4331.0
2 TraesCS3A01G524700 chr3A 95.392 2669 94 12 3429 6093 745499178 745501821 0.000000e+00 4220.0
3 TraesCS3A01G524700 chr3A 98.111 1006 18 1 1338 2343 85024807 85025811 0.000000e+00 1751.0
4 TraesCS3A01G524700 chr3A 95.534 1030 21 2 1338 2343 51585331 51584303 0.000000e+00 1624.0
5 TraesCS3A01G524700 chr3A 96.129 465 17 1 2968 3432 51583576 51583113 0.000000e+00 758.0
6 TraesCS3A01G524700 chr3A 98.126 427 8 0 2993 3419 85026546 85026972 0.000000e+00 745.0
7 TraesCS3A01G524700 chr3A 93.564 404 15 4 2970 3371 8246955 8247349 7.360000e-165 592.0
8 TraesCS3A01G524700 chr3A 97.403 154 3 1 1032 1184 35989371 35989218 2.360000e-65 261.0
9 TraesCS3A01G524700 chr3A 96.711 152 5 0 1033 1184 740812799 740812950 3.950000e-63 254.0
10 TraesCS3A01G524700 chr3A 95.513 156 6 1 1030 1184 745479149 745479304 1.840000e-61 248.0
11 TraesCS3A01G524700 chr3A 95.763 118 5 0 3429 3546 693149377 693149494 3.140000e-44 191.0
12 TraesCS3A01G524700 chr3A 98.131 107 2 0 1216 1322 35989247 35989141 4.060000e-43 187.0
13 TraesCS3A01G524700 chr3A 97.196 107 3 0 1216 1322 7331916 7332022 1.890000e-41 182.0
14 TraesCS3A01G524700 chr3A 97.196 107 3 0 1216 1322 51592498 51592392 1.890000e-41 182.0
15 TraesCS3A01G524700 chr3A 96.970 33 1 0 643 675 739384350 739384318 1.000000e-03 56.5
16 TraesCS3A01G524700 chr3A 96.970 33 1 0 703 735 739384410 739384378 1.000000e-03 56.5
17 TraesCS3A01G524700 chr4A 96.255 2670 88 10 3429 6092 599789507 599786844 0.000000e+00 4366.0
18 TraesCS3A01G524700 chr4A 96.004 2678 95 7 3429 6097 583576833 583574159 0.000000e+00 4342.0
19 TraesCS3A01G524700 chr4A 95.793 2353 84 11 3429 5771 603293513 603291166 0.000000e+00 3783.0
20 TraesCS3A01G524700 chr4A 96.524 1007 32 2 1338 2343 708407561 708408565 0.000000e+00 1663.0
21 TraesCS3A01G524700 chr4A 97.441 469 11 1 2968 3435 583580580 583580112 0.000000e+00 798.0
22 TraesCS3A01G524700 chr4A 97.037 405 11 1 2968 3371 593692497 593692093 0.000000e+00 680.0
23 TraesCS3A01G524700 chr4A 95.024 422 17 3 3012 3432 599790154 599789736 0.000000e+00 660.0
24 TraesCS3A01G524700 chr4A 99.065 107 1 0 1216 1322 583588642 583588536 8.720000e-45 193.0
25 TraesCS3A01G524700 chr1A 94.828 2668 107 14 3431 6092 34899092 34896450 0.000000e+00 4133.0
26 TraesCS3A01G524700 chr1A 98.195 942 13 4 1338 2277 497327222 497328161 0.000000e+00 1642.0
27 TraesCS3A01G524700 chr1A 96.263 990 22 3 1338 2314 14372993 14372006 0.000000e+00 1609.0
28 TraesCS3A01G524700 chr1A 96.129 465 16 2 2968 3432 497328653 497329115 0.000000e+00 758.0
29 TraesCS3A01G524700 chr1A 98.013 151 3 0 1034 1184 588724744 588724894 6.550000e-66 263.0
30 TraesCS3A01G524700 chr1A 96.667 150 5 0 1035 1184 536952389 536952240 5.100000e-62 250.0
31 TraesCS3A01G524700 chr1A 99.065 107 1 0 1216 1322 588724865 588724971 8.720000e-45 193.0
32 TraesCS3A01G524700 chr7A 94.755 2669 115 10 3429 6092 71728202 71730850 0.000000e+00 4130.0
33 TraesCS3A01G524700 chr7A 93.591 2668 125 23 3432 6092 11739427 11742055 0.000000e+00 3938.0
34 TraesCS3A01G524700 chr7A 92.589 1093 43 12 4986 6072 704775078 704776138 0.000000e+00 1535.0
35 TraesCS3A01G524700 chr7A 92.532 1031 37 9 5051 6072 13534200 13535199 0.000000e+00 1441.0
36 TraesCS3A01G524700 chr7A 97.333 150 4 0 1035 1184 28155929 28156078 1.100000e-63 255.0
37 TraesCS3A01G524700 chr7A 94.355 124 1 3 1205 1322 701371733 701371856 1.460000e-42 185.0
38 TraesCS3A01G524700 chrUn 96.122 2527 87 8 3429 5950 63542134 63539614 0.000000e+00 4113.0
39 TraesCS3A01G524700 chrUn 82.609 115 16 3 106 216 46225999 46226113 1.960000e-16 99.0
40 TraesCS3A01G524700 chr6A 94.422 2671 91 28 3429 6092 22982277 22979658 0.000000e+00 4054.0
41 TraesCS3A01G524700 chr6A 95.578 2352 91 9 3429 5770 12021743 12019395 0.000000e+00 3755.0
42 TraesCS3A01G524700 chr6A 97.326 187 5 0 2968 3154 27268206 27268392 1.380000e-82 318.0
43 TraesCS3A01G524700 chr6A 98.131 107 2 0 1216 1322 12932122 12932228 4.060000e-43 187.0
44 TraesCS3A01G524700 chr2A 92.393 1262 57 9 4787 6044 754123204 754124430 0.000000e+00 1762.0
45 TraesCS3A01G524700 chr2A 96.736 1011 25 5 1338 2343 771053468 771052461 0.000000e+00 1677.0
46 TraesCS3A01G524700 chr2A 96.315 597 21 1 5496 6092 751253671 751253076 0.000000e+00 979.0
47 TraesCS3A01G524700 chr2A 96.315 597 21 1 5496 6092 751275757 751275162 0.000000e+00 979.0
48 TraesCS3A01G524700 chr2A 96.782 435 12 2 2999 3432 771051431 771050998 0.000000e+00 725.0
49 TraesCS3A01G524700 chr2A 97.351 151 4 0 1034 1184 72149903 72149753 3.050000e-64 257.0
50 TraesCS3A01G524700 chr2A 97.333 150 4 0 1035 1184 771060877 771060728 1.100000e-63 255.0
51 TraesCS3A01G524700 chr2A 99.065 107 1 0 1216 1322 735436111 735436005 8.720000e-45 193.0
52 TraesCS3A01G524700 chr2A 98.131 107 2 0 1216 1322 72149782 72149676 4.060000e-43 187.0
53 TraesCS3A01G524700 chr5A 98.376 985 14 2 1338 2322 3275442 3276424 0.000000e+00 1729.0
54 TraesCS3A01G524700 chr5A 96.230 1008 22 5 1338 2343 618453951 618452958 0.000000e+00 1637.0
55 TraesCS3A01G524700 chr5A 88.058 1164 111 17 6362 7516 697761046 697759902 0.000000e+00 1354.0
56 TraesCS3A01G524700 chr5A 96.460 452 16 0 2968 3419 618452353 618451902 0.000000e+00 747.0
57 TraesCS3A01G524700 chr5A 83.836 730 101 10 6799 7517 697764775 697764052 0.000000e+00 678.0
58 TraesCS3A01G524700 chr5A 86.282 277 28 4 758 1034 697761585 697761319 8.360000e-75 292.0
59 TraesCS3A01G524700 chr5A 96.689 151 5 0 1034 1184 622341613 622341763 1.420000e-62 252.0
60 TraesCS3A01G524700 chr5A 84.577 201 14 5 6170 6369 697761259 697761075 5.250000e-42 183.0
61 TraesCS3A01G524700 chr5A 76.543 243 45 9 7268 7508 697752649 697752417 1.160000e-23 122.0
62 TraesCS3A01G524700 chr5A 79.661 118 20 4 916 1033 697763547 697763434 1.970000e-11 82.4
63 TraesCS3A01G524700 chr2B 96.488 968 32 1 1338 2305 780026430 780025465 0.000000e+00 1598.0
64 TraesCS3A01G524700 chr3D 91.876 1157 59 16 6092 7232 606950206 606949069 0.000000e+00 1583.0
65 TraesCS3A01G524700 chr3D 88.263 835 59 13 7228 8026 606949039 606948208 0.000000e+00 963.0
66 TraesCS3A01G524700 chr3D 85.735 701 41 22 6 675 606951205 606950533 0.000000e+00 686.0
67 TraesCS3A01G524700 chr3D 92.580 283 15 3 757 1034 606950484 606950203 1.330000e-107 401.0
68 TraesCS3A01G524700 chr3D 88.849 278 23 5 8243 8515 606948045 606947771 1.370000e-87 335.0
69 TraesCS3A01G524700 chr3D 93.182 44 3 0 700 743 606950568 606950525 1.980000e-06 65.8
70 TraesCS3A01G524700 chr3B 90.901 1154 68 17 6092 7232 816278317 816277188 0.000000e+00 1515.0
71 TraesCS3A01G524700 chr3B 84.863 839 69 22 7228 8027 816277158 816276339 0.000000e+00 793.0
72 TraesCS3A01G524700 chr3B 90.054 553 42 4 6162 6712 155848773 155848232 0.000000e+00 704.0
73 TraesCS3A01G524700 chr3B 92.527 281 14 2 758 1033 816278593 816278315 6.190000e-106 396.0
74 TraesCS3A01G524700 chr3B 90.210 286 14 8 8242 8515 816275915 816275632 2.260000e-95 361.0
75 TraesCS3A01G524700 chr3B 93.023 215 11 1 117 331 816279068 816278858 2.310000e-80 311.0
76 TraesCS3A01G524700 chr3B 93.000 200 14 0 8039 8238 816276174 816275975 8.360000e-75 292.0
77 TraesCS3A01G524700 chr3B 85.143 175 16 6 6717 6888 155848195 155848028 4.090000e-38 171.0
78 TraesCS3A01G524700 chr3B 91.304 115 6 1 489 603 816278843 816278733 4.120000e-33 154.0
79 TraesCS3A01G524700 chr3B 80.392 204 24 11 480 675 814751269 814751074 3.200000e-29 141.0
80 TraesCS3A01G524700 chr3B 100.000 33 0 0 143 175 814662074 814662042 2.570000e-05 62.1
81 TraesCS3A01G524700 chr3B 100.000 33 0 0 143 175 814899090 814899058 2.570000e-05 62.1
82 TraesCS3A01G524700 chr4D 87.371 1164 119 15 6362 7516 509101485 509100341 0.000000e+00 1310.0
83 TraesCS3A01G524700 chr4D 87.437 398 44 4 6799 7196 509105223 509104832 3.620000e-123 453.0
84 TraesCS3A01G524700 chr4D 86.145 332 41 3 7523 7849 175089972 175089641 3.780000e-93 353.0
85 TraesCS3A01G524700 chr4D 86.885 305 40 0 7227 7531 509104756 509104452 8.180000e-90 342.0
86 TraesCS3A01G524700 chr4D 84.179 335 53 0 6802 7136 509103080 509102746 8.240000e-85 326.0
87 TraesCS3A01G524700 chr4D 87.633 283 27 5 752 1034 509102041 509101767 1.070000e-83 322.0
88 TraesCS3A01G524700 chr4D 85.145 276 25 4 6092 6367 509101770 509101511 1.410000e-67 268.0
89 TraesCS3A01G524700 chr4D 81.081 333 63 0 6804 7136 509099196 509098864 5.070000e-67 267.0
90 TraesCS3A01G524700 chr4D 82.723 191 26 2 6092 6275 509100001 509099811 6.840000e-36 163.0
91 TraesCS3A01G524700 chr4D 89.474 76 5 3 961 1033 509100074 509099999 9.100000e-15 93.5
92 TraesCS3A01G524700 chr4B 89.290 803 74 8 6406 7202 658172730 658173526 0.000000e+00 996.0
93 TraesCS3A01G524700 chr4B 84.005 744 100 10 6800 7531 658168939 658169675 0.000000e+00 697.0
94 TraesCS3A01G524700 chr4B 89.716 282 26 1 7238 7516 658173592 658173873 2.920000e-94 357.0
95 TraesCS3A01G524700 chr4B 84.431 334 52 0 6803 7136 658171110 658171443 6.370000e-86 329.0
96 TraesCS3A01G524700 chr4B 85.623 313 40 5 7523 7833 316953194 316952885 2.960000e-84 324.0
97 TraesCS3A01G524700 chr4B 86.620 284 29 6 752 1034 658172136 658172411 1.070000e-78 305.0
98 TraesCS3A01G524700 chr4B 85.870 276 23 4 6092 6367 658172408 658172667 6.510000e-71 279.0
99 TraesCS3A01G524700 chr4B 81.283 187 25 7 6098 6275 658174190 658174375 8.910000e-30 143.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G524700 chr3A 739376538 739385052 8514 True 3672.500000 10246 98.485000 1 8515 4 chr3A.!!$R4 8514
1 TraesCS3A01G524700 chr3A 745499178 745501821 2643 False 4220.000000 4220 95.392000 3429 6093 1 chr3A.!!$F6 2664
2 TraesCS3A01G524700 chr3A 85024807 85026972 2165 False 1248.000000 1751 98.118500 1338 3419 2 chr3A.!!$F7 2081
3 TraesCS3A01G524700 chr3A 51583113 51585331 2218 True 1191.000000 1624 95.831500 1338 3432 2 chr3A.!!$R3 2094
4 TraesCS3A01G524700 chr4A 603291166 603293513 2347 True 3783.000000 3783 95.793000 3429 5771 1 chr4A.!!$R3 2342
5 TraesCS3A01G524700 chr4A 583574159 583580580 6421 True 2570.000000 4342 96.722500 2968 6097 2 chr4A.!!$R4 3129
6 TraesCS3A01G524700 chr4A 599786844 599790154 3310 True 2513.000000 4366 95.639500 3012 6092 2 chr4A.!!$R5 3080
7 TraesCS3A01G524700 chr4A 708407561 708408565 1004 False 1663.000000 1663 96.524000 1338 2343 1 chr4A.!!$F1 1005
8 TraesCS3A01G524700 chr1A 34896450 34899092 2642 True 4133.000000 4133 94.828000 3431 6092 1 chr1A.!!$R2 2661
9 TraesCS3A01G524700 chr1A 14372006 14372993 987 True 1609.000000 1609 96.263000 1338 2314 1 chr1A.!!$R1 976
10 TraesCS3A01G524700 chr1A 497327222 497329115 1893 False 1200.000000 1642 97.162000 1338 3432 2 chr1A.!!$F1 2094
11 TraesCS3A01G524700 chr7A 71728202 71730850 2648 False 4130.000000 4130 94.755000 3429 6092 1 chr7A.!!$F4 2663
12 TraesCS3A01G524700 chr7A 11739427 11742055 2628 False 3938.000000 3938 93.591000 3432 6092 1 chr7A.!!$F1 2660
13 TraesCS3A01G524700 chr7A 704775078 704776138 1060 False 1535.000000 1535 92.589000 4986 6072 1 chr7A.!!$F6 1086
14 TraesCS3A01G524700 chr7A 13534200 13535199 999 False 1441.000000 1441 92.532000 5051 6072 1 chr7A.!!$F2 1021
15 TraesCS3A01G524700 chrUn 63539614 63542134 2520 True 4113.000000 4113 96.122000 3429 5950 1 chrUn.!!$R1 2521
16 TraesCS3A01G524700 chr6A 22979658 22982277 2619 True 4054.000000 4054 94.422000 3429 6092 1 chr6A.!!$R2 2663
17 TraesCS3A01G524700 chr6A 12019395 12021743 2348 True 3755.000000 3755 95.578000 3429 5770 1 chr6A.!!$R1 2341
18 TraesCS3A01G524700 chr2A 754123204 754124430 1226 False 1762.000000 1762 92.393000 4787 6044 1 chr2A.!!$F1 1257
19 TraesCS3A01G524700 chr2A 771050998 771053468 2470 True 1201.000000 1677 96.759000 1338 3432 2 chr2A.!!$R6 2094
20 TraesCS3A01G524700 chr2A 751253076 751253671 595 True 979.000000 979 96.315000 5496 6092 1 chr2A.!!$R2 596
21 TraesCS3A01G524700 chr2A 751275162 751275757 595 True 979.000000 979 96.315000 5496 6092 1 chr2A.!!$R3 596
22 TraesCS3A01G524700 chr5A 3275442 3276424 982 False 1729.000000 1729 98.376000 1338 2322 1 chr5A.!!$F1 984
23 TraesCS3A01G524700 chr5A 618451902 618453951 2049 True 1192.000000 1637 96.345000 1338 3419 2 chr5A.!!$R2 2081
24 TraesCS3A01G524700 chr5A 697759902 697764775 4873 True 517.880000 1354 84.482800 758 7517 5 chr5A.!!$R3 6759
25 TraesCS3A01G524700 chr2B 780025465 780026430 965 True 1598.000000 1598 96.488000 1338 2305 1 chr2B.!!$R1 967
26 TraesCS3A01G524700 chr3D 606947771 606951205 3434 True 672.300000 1583 90.080833 6 8515 6 chr3D.!!$R1 8509
27 TraesCS3A01G524700 chr3B 816275632 816279068 3436 True 546.000000 1515 90.832571 117 8515 7 chr3B.!!$R5 8398
28 TraesCS3A01G524700 chr3B 155848028 155848773 745 True 437.500000 704 87.598500 6162 6888 2 chr3B.!!$R4 726
29 TraesCS3A01G524700 chr4D 509098864 509105223 6359 True 393.833333 1310 85.769778 752 7531 9 chr4D.!!$R2 6779
30 TraesCS3A01G524700 chr4B 658168939 658174375 5436 False 443.714286 996 85.887857 752 7531 7 chr4B.!!$F1 6779

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
286 301 0.610785 CACGCCACCCCTACCAAAAT 60.611 55.000 0.00 0.00 0.00 1.82 F
1181 3740 0.104120 CCAGGAATGTCGTCGGCATA 59.896 55.000 13.59 0.00 0.00 3.14 F
1242 3801 0.104120 CCAGGAATGTCGTCGGCATA 59.896 55.000 13.59 0.00 0.00 3.14 F
1298 3857 0.386858 CCGTACATCTATGCCGACGG 60.387 60.000 10.29 10.29 41.85 4.79 F
1565 4124 0.729690 GACAATCCGAAAGAGCTGCC 59.270 55.000 0.00 0.00 0.00 4.85 F
3155 6399 1.599071 CATGTGCGTTTCTATGCCGAT 59.401 47.619 0.00 0.00 35.33 4.18 F
4514 10412 0.385751 CTACCGTGTCATCGCCATCT 59.614 55.000 0.00 0.00 0.00 2.90 F
6272 12889 0.105778 GCACACCTCCATAGAGCCTC 59.894 60.000 0.00 0.00 38.96 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1162 3721 0.104120 TATGCCGACGACATTCCTGG 59.896 55.000 0.92 0.00 0.00 4.45 R
3392 6637 4.467084 ACGGACGGCGATGGCATT 62.467 61.111 16.62 0.00 42.47 3.56 R
3540 8751 4.999939 GTTGCAAACGCCCGGCAG 63.000 66.667 10.77 4.95 36.92 4.85 R
3821 9036 2.751259 GGTGATGACACGGTAGTAGACA 59.249 50.000 0.00 0.00 46.77 3.41 R
4443 10341 7.806487 CGTCAATATTACTAAATACTCGGAGCA 59.194 37.037 4.58 0.00 30.42 4.26 R
4866 11442 0.250124 CCCTGTAGCGTTTGACCACA 60.250 55.000 0.00 0.00 0.00 4.17 R
6486 13155 0.034767 TTGGCCTTCATGCTCTCCAG 60.035 55.000 3.32 0.00 0.00 3.86 R
7912 14704 0.035317 ATGCCCGATACATGCGTCAT 59.965 50.000 0.00 0.00 0.00 3.06 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 36 4.708726 AAAACATTATCTGGTGCAGAGC 57.291 40.909 0.00 0.00 44.08 4.09
64 66 6.405176 GCCAGCTGAAGCAAGTATTTCTAATT 60.405 38.462 17.39 0.00 45.16 1.40
74 76 6.015940 GCAAGTATTTCTAATTAGGCATGGCT 60.016 38.462 26.37 26.37 0.00 4.75
81 83 9.987272 ATTTCTAATTAGGCATGGCTAAATTTC 57.013 29.630 36.39 0.00 30.42 2.17
97 99 9.317936 GGCTAAATTTCCTTTGAAGAATATTGG 57.682 33.333 0.00 0.00 0.00 3.16
101 103 7.968014 ATTTCCTTTGAAGAATATTGGAGCT 57.032 32.000 0.00 0.00 0.00 4.09
102 104 6.764308 TTCCTTTGAAGAATATTGGAGCTG 57.236 37.500 0.00 0.00 0.00 4.24
103 105 5.819991 TCCTTTGAAGAATATTGGAGCTGT 58.180 37.500 0.00 0.00 0.00 4.40
181 183 4.022762 GCAGATCAAGCTCTACTTATCCGA 60.023 45.833 0.00 0.00 36.04 4.55
217 219 4.622260 AAGCACAGCCACCAATTTATTT 57.378 36.364 0.00 0.00 0.00 1.40
219 221 5.937975 AGCACAGCCACCAATTTATTTAT 57.062 34.783 0.00 0.00 0.00 1.40
261 263 2.639286 CAAGCACACCGACTTGCC 59.361 61.111 0.00 0.00 39.75 4.52
262 264 2.594592 AAGCACACCGACTTGCCC 60.595 61.111 0.00 0.00 39.75 5.36
263 265 4.643387 AGCACACCGACTTGCCCC 62.643 66.667 0.00 0.00 39.75 5.80
286 301 0.610785 CACGCCACCCCTACCAAAAT 60.611 55.000 0.00 0.00 0.00 1.82
332 351 5.876651 TCCTCAGAAGCAAGCTTATATCA 57.123 39.130 7.37 0.00 36.26 2.15
419 438 4.026744 TGGGTTTTTCAGTTGGTCATTCA 58.973 39.130 0.00 0.00 0.00 2.57
435 454 9.585099 TTGGTCATTCAATTATTATGTTCTTGC 57.415 29.630 0.00 0.00 0.00 4.01
437 456 9.754382 GGTCATTCAATTATTATGTTCTTGCAT 57.246 29.630 0.00 0.00 0.00 3.96
439 458 9.752961 TCATTCAATTATTATGTTCTTGCATGG 57.247 29.630 0.00 0.00 0.00 3.66
457 500 2.594131 TGGTATGGGACTGGACGATAG 58.406 52.381 0.00 0.00 46.19 2.08
472 516 7.228108 ACTGGACGATAGACATTCGAGTATTAA 59.772 37.037 0.00 0.00 39.81 1.40
519 563 5.484639 CACATTTACTGATTTTGTGCGTG 57.515 39.130 0.00 0.00 32.24 5.34
655 700 7.301068 GAAGAATTCAGTTGTAGTGGATCAG 57.699 40.000 8.44 0.00 46.62 2.90
656 701 6.611613 AGAATTCAGTTGTAGTGGATCAGA 57.388 37.500 8.44 0.00 0.00 3.27
657 702 7.192852 AGAATTCAGTTGTAGTGGATCAGAT 57.807 36.000 8.44 0.00 0.00 2.90
658 703 7.271511 AGAATTCAGTTGTAGTGGATCAGATC 58.728 38.462 8.44 1.18 0.00 2.75
672 717 6.161855 GGATCAGATCCTGTTGTATGTGTA 57.838 41.667 21.00 0.00 46.19 2.90
673 718 6.763355 GGATCAGATCCTGTTGTATGTGTAT 58.237 40.000 21.00 0.00 46.19 2.29
675 720 8.535335 GGATCAGATCCTGTTGTATGTGTATAT 58.465 37.037 21.00 0.00 46.19 0.86
677 722 8.477419 TCAGATCCTGTTGTATGTGTATATGA 57.523 34.615 0.00 0.00 32.61 2.15
678 723 9.093458 TCAGATCCTGTTGTATGTGTATATGAT 57.907 33.333 0.00 0.00 32.61 2.45
679 724 9.148104 CAGATCCTGTTGTATGTGTATATGATG 57.852 37.037 0.00 0.00 0.00 3.07
681 726 9.710900 GATCCTGTTGTATGTGTATATGATGAA 57.289 33.333 0.00 0.00 0.00 2.57
699 744 8.649973 ATGATGAAATACGTACTTCTTTCTCC 57.350 34.615 16.79 10.01 0.00 3.71
702 747 9.099454 GATGAAATACGTACTTCTTTCTCCAAT 57.901 33.333 16.79 4.55 0.00 3.16
703 748 8.842358 TGAAATACGTACTTCTTTCTCCAATT 57.158 30.769 16.79 0.00 0.00 2.32
704 749 8.717821 TGAAATACGTACTTCTTTCTCCAATTG 58.282 33.333 16.79 0.00 0.00 2.32
705 750 8.617290 AAATACGTACTTCTTTCTCCAATTGT 57.383 30.769 4.43 0.00 0.00 2.71
707 752 8.928270 ATACGTACTTCTTTCTCCAATTGTAG 57.072 34.615 4.43 0.00 0.00 2.74
708 753 6.756221 ACGTACTTCTTTCTCCAATTGTAGT 58.244 36.000 4.43 0.00 0.00 2.73
709 754 6.645415 ACGTACTTCTTTCTCCAATTGTAGTG 59.355 38.462 4.43 0.00 0.00 2.74
710 755 6.090898 CGTACTTCTTTCTCCAATTGTAGTGG 59.909 42.308 4.43 0.00 37.51 4.00
711 756 6.187727 ACTTCTTTCTCCAATTGTAGTGGA 57.812 37.500 4.43 0.00 43.03 4.02
712 757 6.784031 ACTTCTTTCTCCAATTGTAGTGGAT 58.216 36.000 4.43 0.00 44.19 3.41
713 758 6.881602 ACTTCTTTCTCCAATTGTAGTGGATC 59.118 38.462 4.43 0.00 44.19 3.36
714 759 6.373005 TCTTTCTCCAATTGTAGTGGATCA 57.627 37.500 4.43 0.00 44.19 2.92
716 761 6.213397 TCTTTCTCCAATTGTAGTGGATCAGA 59.787 38.462 4.43 0.00 44.19 3.27
718 763 6.166984 TCTCCAATTGTAGTGGATCAGATC 57.833 41.667 4.43 1.18 44.19 2.75
951 3510 3.507411 AGGTAGCCAGAACACAAGACTA 58.493 45.455 0.00 0.00 0.00 2.59
1034 3593 4.767255 CCCGAGTGTGCAGGCCTC 62.767 72.222 0.00 0.00 0.00 4.70
1035 3594 4.007644 CCGAGTGTGCAGGCCTCA 62.008 66.667 0.00 0.57 0.00 3.86
1036 3595 2.740055 CGAGTGTGCAGGCCTCAC 60.740 66.667 21.58 21.58 35.14 3.51
1037 3596 2.746359 GAGTGTGCAGGCCTCACT 59.254 61.111 22.11 22.11 43.72 3.41
1038 3597 1.877576 CGAGTGTGCAGGCCTCACTA 61.878 60.000 22.00 12.19 41.58 2.74
1039 3598 0.390472 GAGTGTGCAGGCCTCACTAC 60.390 60.000 22.00 19.96 41.58 2.73
1040 3599 1.376037 GTGTGCAGGCCTCACTACC 60.376 63.158 25.75 15.27 35.58 3.18
1041 3600 2.125512 GTGCAGGCCTCACTACCG 60.126 66.667 21.27 4.19 0.00 4.02
1042 3601 3.390521 TGCAGGCCTCACTACCGG 61.391 66.667 0.00 0.00 0.00 5.28
1043 3602 3.075005 GCAGGCCTCACTACCGGA 61.075 66.667 9.46 0.00 0.00 5.14
1044 3603 2.656069 GCAGGCCTCACTACCGGAA 61.656 63.158 9.46 0.00 0.00 4.30
1045 3604 1.972660 GCAGGCCTCACTACCGGAAT 61.973 60.000 9.46 0.00 0.00 3.01
1046 3605 0.105039 CAGGCCTCACTACCGGAATC 59.895 60.000 9.46 0.00 0.00 2.52
1047 3606 1.067582 GGCCTCACTACCGGAATCG 59.932 63.158 9.46 0.00 0.00 3.34
1048 3607 1.591863 GCCTCACTACCGGAATCGC 60.592 63.158 9.46 0.00 34.56 4.58
1049 3608 1.813859 CCTCACTACCGGAATCGCA 59.186 57.895 9.46 0.00 34.56 5.10
1050 3609 0.527817 CCTCACTACCGGAATCGCAC 60.528 60.000 9.46 0.00 34.56 5.34
1051 3610 0.527817 CTCACTACCGGAATCGCACC 60.528 60.000 9.46 0.00 34.56 5.01
1052 3611 1.520787 CACTACCGGAATCGCACCC 60.521 63.158 9.46 0.00 34.56 4.61
1053 3612 1.684734 ACTACCGGAATCGCACCCT 60.685 57.895 9.46 0.00 34.56 4.34
1054 3613 0.396139 ACTACCGGAATCGCACCCTA 60.396 55.000 9.46 0.00 34.56 3.53
1055 3614 0.966920 CTACCGGAATCGCACCCTAT 59.033 55.000 9.46 0.00 34.56 2.57
1056 3615 0.677288 TACCGGAATCGCACCCTATG 59.323 55.000 9.46 0.00 34.56 2.23
1099 3658 4.856801 CCCTGAATGGCCGTCGGG 62.857 72.222 22.16 22.16 40.71 5.14
1100 3659 3.781307 CCTGAATGGCCGTCGGGA 61.781 66.667 23.99 0.00 43.30 5.14
1101 3660 2.511600 CTGAATGGCCGTCGGGAC 60.512 66.667 14.38 0.00 44.16 4.46
1108 3667 2.753043 GCCGTCGGGACAGGTCTA 60.753 66.667 14.38 0.00 34.06 2.59
1109 3668 2.125961 GCCGTCGGGACAGGTCTAT 61.126 63.158 14.38 0.00 34.06 1.98
1110 3669 1.734137 CCGTCGGGACAGGTCTATG 59.266 63.158 2.34 0.00 34.06 2.23
1111 3670 1.065928 CGTCGGGACAGGTCTATGC 59.934 63.158 0.00 0.00 0.00 3.14
1112 3671 1.442148 GTCGGGACAGGTCTATGCC 59.558 63.158 0.00 0.00 0.00 4.40
1113 3672 2.125326 TCGGGACAGGTCTATGCCG 61.125 63.158 2.76 2.76 33.81 5.69
1114 3673 2.125326 CGGGACAGGTCTATGCCGA 61.125 63.158 3.05 0.00 34.20 5.54
1115 3674 1.442148 GGGACAGGTCTATGCCGAC 59.558 63.158 0.00 0.00 0.00 4.79
1116 3675 1.065928 GGACAGGTCTATGCCGACG 59.934 63.158 0.00 0.00 34.75 5.12
1117 3676 1.065928 GACAGGTCTATGCCGACGG 59.934 63.158 10.29 10.29 34.75 4.79
1133 3692 4.910585 GGCACCCGTCGGCATAGG 62.911 72.222 5.50 0.00 0.00 2.57
1152 3711 3.625232 CCGTCGGCAACATATCCG 58.375 61.111 0.00 0.00 46.52 4.18
1153 3712 1.227147 CCGTCGGCAACATATCCGT 60.227 57.895 0.00 0.00 45.44 4.69
1154 3713 1.213094 CCGTCGGCAACATATCCGTC 61.213 60.000 0.00 0.00 45.44 4.79
1155 3714 1.537289 CGTCGGCAACATATCCGTCG 61.537 60.000 6.02 6.02 46.47 5.12
1156 3715 1.066752 TCGGCAACATATCCGTCGG 59.933 57.895 4.39 4.39 45.44 4.79
1157 3716 2.594962 CGGCAACATATCCGTCGGC 61.595 63.158 6.34 0.00 40.72 5.54
1158 3717 2.594962 GGCAACATATCCGTCGGCG 61.595 63.158 6.34 0.29 37.95 6.46
1159 3718 1.881252 GCAACATATCCGTCGGCGT 60.881 57.895 9.28 0.00 36.15 5.68
1160 3719 0.595567 GCAACATATCCGTCGGCGTA 60.596 55.000 9.28 0.00 36.15 4.42
1161 3720 1.405461 CAACATATCCGTCGGCGTAG 58.595 55.000 9.28 1.66 36.15 3.51
1175 3734 2.959275 CGTAGCCAGGAATGTCGTC 58.041 57.895 0.00 0.00 0.00 4.20
1176 3735 0.866061 CGTAGCCAGGAATGTCGTCG 60.866 60.000 0.00 0.00 0.00 5.12
1177 3736 0.527817 GTAGCCAGGAATGTCGTCGG 60.528 60.000 0.00 0.00 0.00 4.79
1178 3737 2.292794 TAGCCAGGAATGTCGTCGGC 62.293 60.000 0.00 0.00 39.90 5.54
1179 3738 2.264480 CCAGGAATGTCGTCGGCA 59.736 61.111 0.14 0.14 0.00 5.69
1180 3739 1.153369 CCAGGAATGTCGTCGGCAT 60.153 57.895 6.49 6.49 0.00 4.40
1181 3740 0.104120 CCAGGAATGTCGTCGGCATA 59.896 55.000 13.59 0.00 0.00 3.14
1182 3741 1.491670 CAGGAATGTCGTCGGCATAG 58.508 55.000 13.59 0.09 0.00 2.23
1183 3742 1.067060 CAGGAATGTCGTCGGCATAGA 59.933 52.381 13.59 0.00 0.00 1.98
1184 3743 1.067212 AGGAATGTCGTCGGCATAGAC 59.933 52.381 13.59 6.49 37.76 2.59
1185 3744 1.488527 GAATGTCGTCGGCATAGACC 58.511 55.000 13.59 0.00 37.85 3.85
1186 3745 1.067212 GAATGTCGTCGGCATAGACCT 59.933 52.381 13.59 0.00 37.85 3.85
1187 3746 0.385751 ATGTCGTCGGCATAGACCTG 59.614 55.000 11.33 0.00 37.85 4.00
1188 3747 0.963856 TGTCGTCGGCATAGACCTGT 60.964 55.000 0.00 0.00 37.85 4.00
1189 3748 0.525668 GTCGTCGGCATAGACCTGTG 60.526 60.000 0.00 0.00 37.85 3.66
1190 3749 0.678684 TCGTCGGCATAGACCTGTGA 60.679 55.000 0.00 0.00 37.85 3.58
1191 3750 0.385751 CGTCGGCATAGACCTGTGAT 59.614 55.000 0.00 0.00 37.85 3.06
1192 3751 1.600663 CGTCGGCATAGACCTGTGATC 60.601 57.143 0.00 0.00 37.85 2.92
1193 3752 1.683917 GTCGGCATAGACCTGTGATCT 59.316 52.381 0.00 0.00 35.22 2.75
1194 3753 2.885266 GTCGGCATAGACCTGTGATCTA 59.115 50.000 0.00 0.00 35.22 1.98
1195 3754 2.885266 TCGGCATAGACCTGTGATCTAC 59.115 50.000 0.00 0.00 31.54 2.59
1196 3755 2.623416 CGGCATAGACCTGTGATCTACA 59.377 50.000 0.00 0.00 37.78 2.74
1197 3756 7.718645 GTCGGCATAGACCTGTGATCTACAC 62.719 52.000 0.00 0.00 40.97 2.90
1212 3771 3.185246 CTACACAGGAATGTAGCCAGG 57.815 52.381 0.30 0.00 44.11 4.45
1213 3772 1.656587 ACACAGGAATGTAGCCAGGA 58.343 50.000 0.00 0.00 0.00 3.86
1214 3773 1.985159 ACACAGGAATGTAGCCAGGAA 59.015 47.619 0.00 0.00 0.00 3.36
1215 3774 2.290323 ACACAGGAATGTAGCCAGGAAC 60.290 50.000 0.00 0.00 0.00 3.62
1216 3775 1.066143 ACAGGAATGTAGCCAGGAACG 60.066 52.381 0.00 0.00 0.00 3.95
1217 3776 0.541863 AGGAATGTAGCCAGGAACGG 59.458 55.000 0.00 0.00 0.00 4.44
1219 3778 0.463833 GAATGTAGCCAGGAACGGGG 60.464 60.000 0.00 0.00 46.15 5.73
1224 3783 4.484872 GCCAGGAACGGGGTAGCC 62.485 72.222 1.07 1.07 46.15 3.93
1225 3784 3.006728 CCAGGAACGGGGTAGCCA 61.007 66.667 14.06 0.00 40.98 4.75
1226 3785 2.584608 CAGGAACGGGGTAGCCAG 59.415 66.667 14.06 11.83 0.00 4.85
1227 3786 2.687566 AGGAACGGGGTAGCCAGG 60.688 66.667 15.68 7.81 0.00 4.45
1228 3787 2.686106 GGAACGGGGTAGCCAGGA 60.686 66.667 15.68 0.00 0.00 3.86
1229 3788 2.295602 GGAACGGGGTAGCCAGGAA 61.296 63.158 15.68 0.00 0.00 3.36
1230 3789 1.632965 GGAACGGGGTAGCCAGGAAT 61.633 60.000 15.68 1.26 0.00 3.01
1231 3790 0.463833 GAACGGGGTAGCCAGGAATG 60.464 60.000 15.68 0.00 0.00 2.67
1232 3791 1.205460 AACGGGGTAGCCAGGAATGT 61.205 55.000 15.68 0.00 0.00 2.71
1233 3792 1.146263 CGGGGTAGCCAGGAATGTC 59.854 63.158 14.06 0.00 0.00 3.06
1234 3793 1.146263 GGGGTAGCCAGGAATGTCG 59.854 63.158 14.06 0.00 0.00 4.35
1235 3794 1.623542 GGGGTAGCCAGGAATGTCGT 61.624 60.000 14.06 0.00 0.00 4.34
1236 3795 0.179081 GGGTAGCCAGGAATGTCGTC 60.179 60.000 5.96 0.00 0.00 4.20
1237 3796 0.527817 GGTAGCCAGGAATGTCGTCG 60.528 60.000 0.00 0.00 0.00 5.12
1238 3797 0.527817 GTAGCCAGGAATGTCGTCGG 60.528 60.000 0.00 0.00 0.00 4.79
1239 3798 2.292794 TAGCCAGGAATGTCGTCGGC 62.293 60.000 0.00 0.00 39.90 5.54
1240 3799 2.264480 CCAGGAATGTCGTCGGCA 59.736 61.111 0.14 0.14 0.00 5.69
1241 3800 1.153369 CCAGGAATGTCGTCGGCAT 60.153 57.895 6.49 6.49 0.00 4.40
1242 3801 0.104120 CCAGGAATGTCGTCGGCATA 59.896 55.000 13.59 0.00 0.00 3.14
1243 3802 1.491670 CAGGAATGTCGTCGGCATAG 58.508 55.000 13.59 0.09 0.00 2.23
1244 3803 1.067060 CAGGAATGTCGTCGGCATAGA 59.933 52.381 13.59 0.00 0.00 1.98
1245 3804 1.754803 AGGAATGTCGTCGGCATAGAA 59.245 47.619 13.59 0.00 0.00 2.10
1246 3805 2.167693 AGGAATGTCGTCGGCATAGAAA 59.832 45.455 13.59 0.00 0.00 2.52
1247 3806 2.540101 GGAATGTCGTCGGCATAGAAAG 59.460 50.000 13.59 0.00 0.00 2.62
1248 3807 2.225068 ATGTCGTCGGCATAGAAAGG 57.775 50.000 11.33 0.00 0.00 3.11
1249 3808 0.459585 TGTCGTCGGCATAGAAAGGC 60.460 55.000 0.00 0.00 0.00 4.35
1254 3813 3.719214 GGCATAGAAAGGCCGTCG 58.281 61.111 0.00 0.00 43.74 5.12
1255 3814 1.887707 GGCATAGAAAGGCCGTCGG 60.888 63.158 6.99 6.99 43.74 4.79
1272 3831 4.130255 GCATAGGCCCTATCCCGA 57.870 61.111 0.00 0.00 0.00 5.14
1273 3832 1.597461 GCATAGGCCCTATCCCGAC 59.403 63.158 0.00 0.00 0.00 4.79
1274 3833 1.890894 CATAGGCCCTATCCCGACG 59.109 63.158 0.00 0.00 0.00 5.12
1275 3834 1.305046 ATAGGCCCTATCCCGACGG 60.305 63.158 6.99 6.99 0.00 4.79
1276 3835 2.090377 ATAGGCCCTATCCCGACGGT 62.090 60.000 13.94 0.00 0.00 4.83
1277 3836 2.989173 TAGGCCCTATCCCGACGGTG 62.989 65.000 13.94 4.52 0.00 4.94
1278 3837 3.152400 GCCCTATCCCGACGGTGT 61.152 66.667 13.94 3.19 0.00 4.16
1279 3838 3.126528 CCCTATCCCGACGGTGTC 58.873 66.667 13.94 0.00 0.00 3.67
1280 3839 2.496291 CCCTATCCCGACGGTGTCC 61.496 68.421 13.94 0.00 0.00 4.02
1292 3851 1.767289 CGGTGTCCGTACATCTATGC 58.233 55.000 0.00 0.00 42.73 3.14
1293 3852 1.602165 CGGTGTCCGTACATCTATGCC 60.602 57.143 0.00 0.00 42.73 4.40
1294 3853 1.602165 GGTGTCCGTACATCTATGCCG 60.602 57.143 0.00 0.00 38.08 5.69
1295 3854 1.335810 GTGTCCGTACATCTATGCCGA 59.664 52.381 0.00 0.00 38.08 5.54
1296 3855 1.335810 TGTCCGTACATCTATGCCGAC 59.664 52.381 0.00 0.00 0.00 4.79
1297 3856 0.589708 TCCGTACATCTATGCCGACG 59.410 55.000 0.00 5.36 33.90 5.12
1298 3857 0.386858 CCGTACATCTATGCCGACGG 60.387 60.000 10.29 10.29 41.85 4.79
1331 3890 2.876550 GGCAACGTTATCCATTCTACCC 59.123 50.000 0.00 0.00 0.00 3.69
1332 3891 2.876550 GCAACGTTATCCATTCTACCCC 59.123 50.000 0.00 0.00 0.00 4.95
1333 3892 3.128349 CAACGTTATCCATTCTACCCCG 58.872 50.000 0.00 0.00 0.00 5.73
1334 3893 2.391678 ACGTTATCCATTCTACCCCGT 58.608 47.619 0.00 0.00 0.00 5.28
1335 3894 2.767960 ACGTTATCCATTCTACCCCGTT 59.232 45.455 0.00 0.00 0.00 4.44
1336 3895 3.181472 ACGTTATCCATTCTACCCCGTTC 60.181 47.826 0.00 0.00 0.00 3.95
1387 3946 1.680735 AGACAAAATTTCGGCAGCACA 59.319 42.857 0.00 0.00 0.00 4.57
1565 4124 0.729690 GACAATCCGAAAGAGCTGCC 59.270 55.000 0.00 0.00 0.00 4.85
1621 4180 2.590114 AACCCTTTCGGACGGGAGG 61.590 63.158 13.35 0.00 43.44 4.30
3155 6399 1.599071 CATGTGCGTTTCTATGCCGAT 59.401 47.619 0.00 0.00 35.33 4.18
3392 6637 3.581024 ATTAGACGTTCTGCGGTAACA 57.419 42.857 0.00 0.00 46.52 2.41
3818 9033 4.218478 GCCGCATCGTTACCGCAC 62.218 66.667 0.00 0.00 0.00 5.34
3821 9036 1.701545 CCGCATCGTTACCGCACAAT 61.702 55.000 0.00 0.00 0.00 2.71
3840 9055 4.461431 ACAATGTCTACTACCGTGTCATCA 59.539 41.667 0.00 0.00 0.00 3.07
3872 9091 4.329545 GGGCCACGCACTGGAGAA 62.330 66.667 4.39 0.00 43.95 2.87
3926 9145 2.510411 CGCATGTATGAGGGCCCA 59.490 61.111 27.56 3.72 0.00 5.36
4486 10384 4.218478 GCCGCATCGTTACCGCAC 62.218 66.667 0.00 0.00 0.00 5.34
4511 10409 0.736636 CTACTACCGTGTCATCGCCA 59.263 55.000 0.00 0.00 0.00 5.69
4514 10412 0.385751 CTACCGTGTCATCGCCATCT 59.614 55.000 0.00 0.00 0.00 2.90
4866 11442 3.308473 GCAAAGTCAAAGGGGTAGATCCT 60.308 47.826 0.00 0.00 35.88 3.24
4961 11537 1.153647 CCTCATACAAGCCGCGTGA 60.154 57.895 13.54 0.00 0.00 4.35
5919 12516 1.050204 CCCCCGTCGGTATATTTGGA 58.950 55.000 11.06 0.00 0.00 3.53
6044 12643 1.261938 CCATATATGCCGACGGGGGA 61.262 60.000 17.22 0.00 42.12 4.81
6093 12692 4.649088 AACAAGTTTTTCTGGTAGTGCC 57.351 40.909 0.00 0.00 37.90 5.01
6174 12785 4.148825 GAGGCGGTCACTGGCGAT 62.149 66.667 4.19 0.00 36.92 4.58
6229 12846 0.326264 CCAAAGGCTACTGCTGGAGT 59.674 55.000 7.10 7.10 39.59 3.85
6257 12874 2.917227 TGGCGAGGAGTCTGCACA 60.917 61.111 0.00 0.00 0.00 4.57
6272 12889 0.105778 GCACACCTCCATAGAGCCTC 59.894 60.000 0.00 0.00 38.96 4.70
6274 12891 0.339859 ACACCTCCATAGAGCCTCCA 59.660 55.000 0.00 0.00 38.96 3.86
6275 12892 1.061812 ACACCTCCATAGAGCCTCCAT 60.062 52.381 0.00 0.00 38.96 3.41
6276 12893 1.622811 CACCTCCATAGAGCCTCCATC 59.377 57.143 0.00 0.00 38.96 3.51
6277 12894 0.894141 CCTCCATAGAGCCTCCATCG 59.106 60.000 0.00 0.00 38.96 3.84
6278 12895 1.626686 CTCCATAGAGCCTCCATCGT 58.373 55.000 0.00 0.00 32.13 3.73
6279 12896 1.967066 CTCCATAGAGCCTCCATCGTT 59.033 52.381 0.00 0.00 32.13 3.85
6280 12897 2.366916 CTCCATAGAGCCTCCATCGTTT 59.633 50.000 0.00 0.00 32.13 3.60
6281 12898 2.771943 TCCATAGAGCCTCCATCGTTTT 59.228 45.455 0.00 0.00 0.00 2.43
6282 12899 3.134458 CCATAGAGCCTCCATCGTTTTC 58.866 50.000 0.00 0.00 0.00 2.29
6283 12900 2.981859 TAGAGCCTCCATCGTTTTCC 57.018 50.000 0.00 0.00 0.00 3.13
6284 12901 1.280457 AGAGCCTCCATCGTTTTCCT 58.720 50.000 0.00 0.00 0.00 3.36
6305 12922 0.772124 AGGACTGGGGCTTCTTCCAA 60.772 55.000 0.00 0.00 31.97 3.53
6319 12941 4.806342 TCTTCCAAGTTAGTTTGTTCGC 57.194 40.909 0.00 0.00 0.00 4.70
6322 12944 3.537580 TCCAAGTTAGTTTGTTCGCTGT 58.462 40.909 0.00 0.00 0.00 4.40
6386 13044 2.221981 GCAAAGACAGTTGACTTCCTCG 59.778 50.000 0.00 0.00 0.00 4.63
6458 13127 3.699067 CTCTCCTGTTTGTTTGCAGTTG 58.301 45.455 0.00 0.00 0.00 3.16
6476 13145 0.107081 TGGTTAACCACAGTGTCCCG 59.893 55.000 23.69 0.00 42.01 5.14
6486 13155 2.813908 GTGTCCCGGACGATGTGC 60.814 66.667 13.02 0.00 34.95 4.57
6515 13184 0.609957 TGAAGGCCAACATCCAGCAG 60.610 55.000 5.01 0.00 0.00 4.24
6669 13338 0.460987 GCCACCTGAGATGAGGAACG 60.461 60.000 0.00 0.00 36.51 3.95
6671 13340 0.534412 CACCTGAGATGAGGAACGCT 59.466 55.000 0.00 0.00 36.51 5.07
6764 13474 1.724082 GTCACGCTCTTCTTCAGCTTC 59.276 52.381 0.00 0.00 34.45 3.86
6765 13475 1.615883 TCACGCTCTTCTTCAGCTTCT 59.384 47.619 0.00 0.00 34.45 2.85
6767 13477 3.255888 TCACGCTCTTCTTCAGCTTCTTA 59.744 43.478 0.00 0.00 34.45 2.10
6768 13478 3.611986 CACGCTCTTCTTCAGCTTCTTAG 59.388 47.826 0.00 0.00 34.45 2.18
6769 13479 3.257127 ACGCTCTTCTTCAGCTTCTTAGT 59.743 43.478 0.00 0.00 34.45 2.24
6770 13480 4.241681 CGCTCTTCTTCAGCTTCTTAGTT 58.758 43.478 0.00 0.00 34.45 2.24
6819 13529 0.249197 CTCATTCAGATCGGCGCTGA 60.249 55.000 23.40 23.40 40.41 4.26
6846 13556 0.400213 TTCTGGTGCGGTGAAGGATT 59.600 50.000 0.00 0.00 0.00 3.01
6922 13632 1.672363 GATCGCTGACAAATGCATCCA 59.328 47.619 0.00 0.00 0.00 3.41
7085 13795 3.060615 GGCAGCTGGCTTCCTGTG 61.061 66.667 31.40 0.00 44.01 3.66
7112 13822 4.651008 TCGGGCGCTTTCGTCGTT 62.651 61.111 7.64 0.00 42.10 3.85
7187 13900 1.168714 GGTGCTTCTTTCTGCCGATT 58.831 50.000 0.00 0.00 0.00 3.34
7233 13982 1.993370 CGCCGTATGCTAGCTAAATCC 59.007 52.381 17.23 0.00 38.05 3.01
7252 14001 4.313277 TCCATGCATTTTCGTTGTTTGA 57.687 36.364 0.00 0.00 0.00 2.69
7349 14101 3.255379 GAACGGCTGTCGATCGCC 61.255 66.667 9.35 15.61 42.43 5.54
7358 14110 4.847516 TCGATCGCCGCGTTCCAG 62.848 66.667 11.09 2.77 38.37 3.86
7391 14143 3.206639 TCCACACCATGATAGGTCCTCTA 59.793 47.826 0.00 0.00 40.77 2.43
7432 14184 1.132643 AGACGATGCCTACAAGACGTC 59.867 52.381 7.70 7.70 43.89 4.34
7439 14191 0.886563 CCTACAAGACGTCGGACCTT 59.113 55.000 10.46 0.00 31.97 3.50
7570 14322 3.100658 TCATTGAAACGGACTCGACAA 57.899 42.857 0.00 0.00 40.11 3.18
7583 14335 0.888619 TCGACAATGCTCTCTTCGGT 59.111 50.000 0.00 0.00 0.00 4.69
7600 14352 5.470098 TCTTCGGTTCTTCTTTCCAATGAAG 59.530 40.000 8.11 8.11 39.94 3.02
7603 14355 4.550422 GGTTCTTCTTTCCAATGAAGTGC 58.450 43.478 12.33 8.05 39.70 4.40
7626 14378 2.295349 CACTGCTTGCAATGGAGTTCTT 59.705 45.455 16.35 0.00 39.60 2.52
7631 14383 4.141981 TGCTTGCAATGGAGTTCTTTTTCA 60.142 37.500 0.00 0.00 0.00 2.69
7649 14401 4.503741 TTCAGGAGGCAAAATTTCTTCG 57.496 40.909 0.00 0.00 0.00 3.79
7680 14432 8.197439 ACTAGCTTTGTTGATTTTAAAGTGCTT 58.803 29.630 0.00 0.00 34.69 3.91
7708 14460 0.249741 GTGTGCCTGTAACTCGGTGT 60.250 55.000 0.00 0.00 0.00 4.16
7711 14463 1.445582 GCCTGTAACTCGGTGTCGG 60.446 63.158 0.00 0.00 36.95 4.79
7752 14504 0.178861 CCCATATGGCCTAGGGAGGT 60.179 60.000 16.97 0.00 45.78 3.85
7754 14506 2.188817 CCATATGGCCTAGGGAGGTAC 58.811 57.143 9.29 0.00 45.78 3.34
7755 14507 2.188817 CATATGGCCTAGGGAGGTACC 58.811 57.143 11.72 2.73 45.78 3.34
7757 14509 0.648301 ATGGCCTAGGGAGGTACCTT 59.352 55.000 17.53 2.33 45.78 3.50
7758 14510 0.326238 TGGCCTAGGGAGGTACCTTG 60.326 60.000 17.53 4.52 45.78 3.61
7768 14525 1.678101 GAGGTACCTTGATTGGCATGC 59.322 52.381 17.53 9.90 0.00 4.06
7782 14539 2.434884 ATGCCGCTGTTCCTGACG 60.435 61.111 0.00 0.00 0.00 4.35
7809 14566 3.445008 TCTTCTCTGGTGGCTAGTGATT 58.555 45.455 0.00 0.00 0.00 2.57
7843 14600 9.623000 ATCCGTATGTTAATAAAGCTAGGTTTT 57.377 29.630 23.78 10.59 0.00 2.43
7912 14704 7.771927 TCTTGTATCAGATGATCAGATAGCA 57.228 36.000 7.67 6.83 36.05 3.49
7917 14709 5.056894 TCAGATGATCAGATAGCATGACG 57.943 43.478 0.09 0.00 33.33 4.35
7929 14721 1.862123 CATGACGCATGTATCGGGC 59.138 57.895 10.49 0.00 37.12 6.13
7941 14733 2.601194 TATCGGGCATCGGCTTGCAA 62.601 55.000 0.00 0.00 44.59 4.08
7945 14737 1.006337 GGCATCGGCTTGCAAACAA 60.006 52.632 0.00 0.00 44.59 2.83
7946 14738 0.390209 GGCATCGGCTTGCAAACAAT 60.390 50.000 0.00 0.00 44.59 2.71
7949 14741 2.883574 CATCGGCTTGCAAACAATCAT 58.116 42.857 0.00 0.00 34.61 2.45
7950 14742 2.350899 TCGGCTTGCAAACAATCATG 57.649 45.000 0.00 0.00 34.61 3.07
7952 14744 1.670674 CGGCTTGCAAACAATCATGCT 60.671 47.619 0.00 0.00 42.97 3.79
7953 14745 1.997606 GGCTTGCAAACAATCATGCTC 59.002 47.619 0.00 0.00 42.97 4.26
7954 14746 2.353406 GGCTTGCAAACAATCATGCTCT 60.353 45.455 0.00 0.00 42.97 4.09
7955 14747 2.666508 GCTTGCAAACAATCATGCTCTG 59.333 45.455 0.00 0.00 42.97 3.35
7959 14754 5.142061 TGCAAACAATCATGCTCTGAAAT 57.858 34.783 0.00 0.00 42.97 2.17
7963 14758 6.146510 GCAAACAATCATGCTCTGAAATTTGA 59.853 34.615 17.69 0.00 36.79 2.69
8027 14826 6.791887 CAAGAGATCTGAACTTGTAAGCAA 57.208 37.500 0.00 0.00 37.03 3.91
8028 14827 6.597614 CAAGAGATCTGAACTTGTAAGCAAC 58.402 40.000 0.00 0.00 37.03 4.17
8029 14828 4.926238 AGAGATCTGAACTTGTAAGCAACG 59.074 41.667 0.00 0.00 0.00 4.10
8030 14829 4.632153 AGATCTGAACTTGTAAGCAACGT 58.368 39.130 0.00 0.00 0.00 3.99
8031 14830 4.686554 AGATCTGAACTTGTAAGCAACGTC 59.313 41.667 0.00 0.00 0.00 4.34
8034 14833 4.211164 TCTGAACTTGTAAGCAACGTCATG 59.789 41.667 0.00 0.00 0.00 3.07
8035 14834 3.249799 TGAACTTGTAAGCAACGTCATGG 59.750 43.478 0.00 0.00 0.00 3.66
8036 14835 2.151202 ACTTGTAAGCAACGTCATGGG 58.849 47.619 0.00 0.00 0.00 4.00
8037 14836 0.878416 TTGTAAGCAACGTCATGGGC 59.122 50.000 0.00 0.00 0.00 5.36
8053 15011 4.007457 GCTCATGGCCTTGCTTGA 57.993 55.556 13.75 3.63 34.27 3.02
8071 15029 0.108207 GATGGTGGGATGCTCAGGAG 59.892 60.000 0.00 0.00 0.00 3.69
8072 15030 0.326904 ATGGTGGGATGCTCAGGAGA 60.327 55.000 0.00 0.00 0.00 3.71
8095 15053 5.451354 ACAAAAGAGCTGGGTAAAGGTAAA 58.549 37.500 0.00 0.00 0.00 2.01
8098 15056 5.514500 AAGAGCTGGGTAAAGGTAAATGA 57.486 39.130 0.00 0.00 0.00 2.57
8147 15105 2.636830 CCAGTCAGTGCTTAATCCCAG 58.363 52.381 0.00 0.00 0.00 4.45
8155 15113 5.183713 TCAGTGCTTAATCCCAGAAACATTG 59.816 40.000 0.00 0.00 0.00 2.82
8189 15147 8.049117 TGGCATTTTTAGATCTAGTCTCATGTT 58.951 33.333 2.02 0.00 38.42 2.71
8240 15198 4.092116 GCATAGGCACTTAGGAAGGAAT 57.908 45.455 0.00 0.00 41.75 3.01
8257 15271 5.290493 AGGAATGAGTGCCGTTATTGATA 57.710 39.130 0.00 0.00 0.00 2.15
8283 15299 3.131933 TGTTCTCTTATCTCCTCTGCTGC 59.868 47.826 0.00 0.00 0.00 5.25
8309 15325 2.412870 TGCTAACAATGTCGTCCTGTG 58.587 47.619 0.00 0.00 0.00 3.66
8326 15343 0.952984 GTGTTCAGCAGAGCCACCTC 60.953 60.000 0.00 0.00 38.42 3.85
8374 15416 3.698539 TGTGTCAAATGGTTGAGAAGCAA 59.301 39.130 0.00 0.00 44.44 3.91
8481 16210 7.381323 TCATATGCAGTGTCTACATATCTTGG 58.619 38.462 0.00 0.00 35.36 3.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 36 1.085091 CTTGCTTCAGCTGGCAGTAG 58.915 55.000 17.16 7.96 42.66 2.57
41 43 8.341173 CCTAATTAGAAATACTTGCTTCAGCTG 58.659 37.037 14.28 7.63 42.66 4.24
64 66 5.268387 TCAAAGGAAATTTAGCCATGCCTA 58.732 37.500 0.00 0.00 0.00 3.93
80 82 5.819991 ACAGCTCCAATATTCTTCAAAGGA 58.180 37.500 0.00 0.00 0.00 3.36
81 83 7.630242 TTACAGCTCCAATATTCTTCAAAGG 57.370 36.000 0.00 0.00 0.00 3.11
99 101 4.336433 TCCAATATTGCAAGAGCTTACAGC 59.664 41.667 10.11 0.00 42.84 4.40
100 102 5.355071 TGTCCAATATTGCAAGAGCTTACAG 59.645 40.000 10.11 0.00 42.74 2.74
101 103 5.252547 TGTCCAATATTGCAAGAGCTTACA 58.747 37.500 10.11 2.90 42.74 2.41
102 104 5.355350 ACTGTCCAATATTGCAAGAGCTTAC 59.645 40.000 10.11 0.13 42.74 2.34
103 105 5.500234 ACTGTCCAATATTGCAAGAGCTTA 58.500 37.500 10.11 0.00 42.74 3.09
109 111 5.633830 AGTCAACTGTCCAATATTGCAAG 57.366 39.130 10.11 8.89 0.00 4.01
181 183 8.244113 GTGGCTGTGCTTAATAAAATACTTCTT 58.756 33.333 0.00 0.00 0.00 2.52
217 219 9.256477 CTTGCTTCTATCGTTTACCACAATATA 57.744 33.333 0.00 0.00 0.00 0.86
219 221 6.036735 GCTTGCTTCTATCGTTTACCACAATA 59.963 38.462 0.00 0.00 0.00 1.90
230 232 1.734465 GTGCTTGCTTGCTTCTATCGT 59.266 47.619 3.47 0.00 0.00 3.73
235 237 1.789078 CGGTGTGCTTGCTTGCTTCT 61.789 55.000 3.47 0.00 0.00 2.85
263 265 4.404098 GTAGGGGTGGCGTGTGGG 62.404 72.222 0.00 0.00 0.00 4.61
264 266 4.404098 GGTAGGGGTGGCGTGTGG 62.404 72.222 0.00 0.00 0.00 4.17
265 267 2.684192 TTTGGTAGGGGTGGCGTGTG 62.684 60.000 0.00 0.00 0.00 3.82
267 269 0.610785 ATTTTGGTAGGGGTGGCGTG 60.611 55.000 0.00 0.00 0.00 5.34
268 270 0.610785 CATTTTGGTAGGGGTGGCGT 60.611 55.000 0.00 0.00 0.00 5.68
269 271 0.610785 ACATTTTGGTAGGGGTGGCG 60.611 55.000 0.00 0.00 0.00 5.69
272 274 4.401202 GGTATTGACATTTTGGTAGGGGTG 59.599 45.833 0.00 0.00 0.00 4.61
273 275 4.571148 GGGTATTGACATTTTGGTAGGGGT 60.571 45.833 0.00 0.00 0.00 4.95
278 280 2.678836 CGCGGGTATTGACATTTTGGTA 59.321 45.455 0.00 0.00 0.00 3.25
286 301 0.674269 GGAAACCGCGGGTATTGACA 60.674 55.000 31.76 0.00 33.12 3.58
370 389 2.309755 AGAACTGATCCATTCTTGGCCA 59.690 45.455 0.00 0.00 43.29 5.36
377 396 4.823989 CCCATACCAAGAACTGATCCATTC 59.176 45.833 0.00 0.00 0.00 2.67
419 438 8.587608 CCCATACCATGCAAGAACATAATAATT 58.412 33.333 0.00 0.00 0.00 1.40
429 448 2.357050 CCAGTCCCATACCATGCAAGAA 60.357 50.000 0.00 0.00 0.00 2.52
430 449 1.212688 CCAGTCCCATACCATGCAAGA 59.787 52.381 0.00 0.00 0.00 3.02
433 452 0.546122 GTCCAGTCCCATACCATGCA 59.454 55.000 0.00 0.00 0.00 3.96
434 453 0.532862 CGTCCAGTCCCATACCATGC 60.533 60.000 0.00 0.00 0.00 4.06
435 454 1.119684 TCGTCCAGTCCCATACCATG 58.880 55.000 0.00 0.00 0.00 3.66
437 456 2.176148 TCTATCGTCCAGTCCCATACCA 59.824 50.000 0.00 0.00 0.00 3.25
438 457 2.557490 GTCTATCGTCCAGTCCCATACC 59.443 54.545 0.00 0.00 0.00 2.73
439 458 3.220110 TGTCTATCGTCCAGTCCCATAC 58.780 50.000 0.00 0.00 0.00 2.39
443 462 2.287668 CGAATGTCTATCGTCCAGTCCC 60.288 54.545 0.00 0.00 35.64 4.46
472 516 9.407380 TGCTATATGAACACCATTAAGTCAAAT 57.593 29.630 0.00 0.00 36.71 2.32
481 525 8.623903 CAGTAAATGTGCTATATGAACACCATT 58.376 33.333 0.00 0.00 36.97 3.16
482 526 7.992608 TCAGTAAATGTGCTATATGAACACCAT 59.007 33.333 0.00 0.00 36.97 3.55
516 560 6.808704 AGTAAGCATATGCATATACAGACACG 59.191 38.462 28.62 5.58 45.16 4.49
517 561 8.539770 AAGTAAGCATATGCATATACAGACAC 57.460 34.615 28.62 9.88 45.16 3.67
518 562 9.559732 AAAAGTAAGCATATGCATATACAGACA 57.440 29.630 28.62 0.00 45.16 3.41
650 695 9.363763 CATATACACATACAACAGGATCTGATC 57.636 37.037 9.18 9.18 35.18 2.92
651 696 9.093458 TCATATACACATACAACAGGATCTGAT 57.907 33.333 1.59 0.00 35.18 2.90
652 697 8.477419 TCATATACACATACAACAGGATCTGA 57.523 34.615 1.59 0.00 35.18 3.27
653 698 9.148104 CATCATATACACATACAACAGGATCTG 57.852 37.037 0.00 0.00 37.52 2.90
654 699 9.093458 TCATCATATACACATACAACAGGATCT 57.907 33.333 0.00 0.00 0.00 2.75
655 700 9.710900 TTCATCATATACACATACAACAGGATC 57.289 33.333 0.00 0.00 0.00 3.36
673 718 9.745880 GGAGAAAGAAGTACGTATTTCATCATA 57.254 33.333 26.49 0.00 34.77 2.15
675 720 7.608153 TGGAGAAAGAAGTACGTATTTCATCA 58.392 34.615 26.49 19.05 34.77 3.07
677 722 9.449719 AATTGGAGAAAGAAGTACGTATTTCAT 57.550 29.630 26.49 16.01 34.77 2.57
678 723 8.717821 CAATTGGAGAAAGAAGTACGTATTTCA 58.282 33.333 26.49 9.45 34.77 2.69
679 724 8.718734 ACAATTGGAGAAAGAAGTACGTATTTC 58.281 33.333 19.84 19.84 32.95 2.17
681 726 9.367444 CTACAATTGGAGAAAGAAGTACGTATT 57.633 33.333 12.77 0.00 0.00 1.89
683 728 7.811236 CACTACAATTGGAGAAAGAAGTACGTA 59.189 37.037 24.82 0.00 0.00 3.57
684 729 6.645415 CACTACAATTGGAGAAAGAAGTACGT 59.355 38.462 24.82 0.00 0.00 3.57
685 730 6.090898 CCACTACAATTGGAGAAAGAAGTACG 59.909 42.308 24.82 0.00 36.02 3.67
686 731 7.159372 TCCACTACAATTGGAGAAAGAAGTAC 58.841 38.462 24.82 0.00 38.28 2.73
687 732 7.311092 TCCACTACAATTGGAGAAAGAAGTA 57.689 36.000 24.82 0.00 38.28 2.24
688 733 6.187727 TCCACTACAATTGGAGAAAGAAGT 57.812 37.500 24.82 0.00 38.28 3.01
689 734 6.881065 TGATCCACTACAATTGGAGAAAGAAG 59.119 38.462 24.82 5.95 46.46 2.85
690 735 6.778821 TGATCCACTACAATTGGAGAAAGAA 58.221 36.000 24.82 5.22 46.46 2.52
691 736 6.213397 TCTGATCCACTACAATTGGAGAAAGA 59.787 38.462 24.82 16.30 46.46 2.52
692 737 6.409704 TCTGATCCACTACAATTGGAGAAAG 58.590 40.000 24.82 12.67 46.46 2.62
693 738 6.373005 TCTGATCCACTACAATTGGAGAAA 57.627 37.500 24.82 9.05 46.46 2.52
694 739 6.408548 GGATCTGATCCACTACAATTGGAGAA 60.409 42.308 27.72 9.40 46.46 2.87
695 740 5.070981 GGATCTGATCCACTACAATTGGAGA 59.929 44.000 27.72 2.31 46.46 3.71
696 741 5.303971 GGATCTGATCCACTACAATTGGAG 58.696 45.833 27.72 16.53 46.46 3.86
791 3335 2.760092 TGCCAACTTGCAAGTTTTCTCT 59.240 40.909 36.19 16.82 46.52 3.10
814 3358 9.770097 TCCAGCTACAATCATAGAAATAGAAAG 57.230 33.333 0.00 0.00 0.00 2.62
951 3510 1.665137 ACTGGTTCCCCGGATACTTT 58.335 50.000 0.73 0.00 39.78 2.66
1034 3593 1.520787 GGGTGCGATTCCGGTAGTG 60.521 63.158 0.00 0.00 36.06 2.74
1035 3594 0.396139 TAGGGTGCGATTCCGGTAGT 60.396 55.000 0.00 0.00 36.06 2.73
1036 3595 0.966920 ATAGGGTGCGATTCCGGTAG 59.033 55.000 0.00 0.00 36.06 3.18
1037 3596 0.677288 CATAGGGTGCGATTCCGGTA 59.323 55.000 0.00 0.00 36.06 4.02
1038 3597 1.445942 CATAGGGTGCGATTCCGGT 59.554 57.895 0.00 0.00 36.06 5.28
1039 3598 1.961277 GCATAGGGTGCGATTCCGG 60.961 63.158 0.00 0.00 45.23 5.14
1040 3599 3.642755 GCATAGGGTGCGATTCCG 58.357 61.111 0.00 0.00 45.23 4.30
1082 3641 4.856801 CCCGACGGCCATTCAGGG 62.857 72.222 8.86 9.87 38.09 4.45
1083 3642 3.781307 TCCCGACGGCCATTCAGG 61.781 66.667 8.86 0.00 41.84 3.86
1084 3643 2.511600 GTCCCGACGGCCATTCAG 60.512 66.667 8.86 0.00 0.00 3.02
1085 3644 3.309436 CTGTCCCGACGGCCATTCA 62.309 63.158 8.86 1.76 0.00 2.57
1086 3645 2.511600 CTGTCCCGACGGCCATTC 60.512 66.667 8.86 0.00 0.00 2.67
1087 3646 4.096003 CCTGTCCCGACGGCCATT 62.096 66.667 8.86 0.00 36.39 3.16
1091 3650 2.125961 ATAGACCTGTCCCGACGGC 61.126 63.158 8.86 0.00 36.39 5.68
1092 3651 1.734137 CATAGACCTGTCCCGACGG 59.266 63.158 6.99 6.99 37.44 4.79
1093 3652 1.065928 GCATAGACCTGTCCCGACG 59.934 63.158 0.00 0.00 0.00 5.12
1094 3653 1.442148 GGCATAGACCTGTCCCGAC 59.558 63.158 0.00 0.00 0.00 4.79
1095 3654 2.125326 CGGCATAGACCTGTCCCGA 61.125 63.158 6.82 0.00 34.20 5.14
1096 3655 2.125326 TCGGCATAGACCTGTCCCG 61.125 63.158 6.42 6.42 33.81 5.14
1097 3656 1.442148 GTCGGCATAGACCTGTCCC 59.558 63.158 0.00 0.00 35.22 4.46
1098 3657 1.065928 CGTCGGCATAGACCTGTCC 59.934 63.158 0.00 0.00 37.85 4.02
1099 3658 1.065928 CCGTCGGCATAGACCTGTC 59.934 63.158 0.00 0.00 37.85 3.51
1100 3659 3.207354 CCGTCGGCATAGACCTGT 58.793 61.111 0.00 0.00 37.85 4.00
1116 3675 4.910585 CCTATGCCGACGGGTGCC 62.911 72.222 17.22 0.00 34.97 5.01
1117 3676 4.910585 CCCTATGCCGACGGGTGC 62.911 72.222 17.22 1.31 34.97 5.01
1118 3677 4.910585 GCCCTATGCCGACGGGTG 62.911 72.222 17.22 0.00 40.22 4.61
1140 3699 2.594962 CGCCGACGGATATGTTGCC 61.595 63.158 20.50 0.00 34.97 4.52
1141 3700 0.595567 TACGCCGACGGATATGTTGC 60.596 55.000 20.50 0.00 46.04 4.17
1142 3701 1.405461 CTACGCCGACGGATATGTTG 58.595 55.000 20.50 7.03 46.04 3.33
1143 3702 0.318445 GCTACGCCGACGGATATGTT 60.318 55.000 20.50 0.00 46.04 2.71
1144 3703 1.285023 GCTACGCCGACGGATATGT 59.715 57.895 20.50 12.09 46.04 2.29
1145 3704 1.443872 GGCTACGCCGACGGATATG 60.444 63.158 20.50 6.18 46.04 1.78
1146 3705 2.960170 GGCTACGCCGACGGATAT 59.040 61.111 20.50 3.95 46.04 1.63
1156 3715 1.146358 GACGACATTCCTGGCTACGC 61.146 60.000 0.00 0.00 0.00 4.42
1157 3716 0.866061 CGACGACATTCCTGGCTACG 60.866 60.000 0.00 0.00 0.00 3.51
1158 3717 0.527817 CCGACGACATTCCTGGCTAC 60.528 60.000 0.00 0.00 0.00 3.58
1159 3718 1.813859 CCGACGACATTCCTGGCTA 59.186 57.895 0.00 0.00 0.00 3.93
1160 3719 2.579201 CCGACGACATTCCTGGCT 59.421 61.111 0.00 0.00 0.00 4.75
1161 3720 3.195698 GCCGACGACATTCCTGGC 61.196 66.667 0.00 0.00 35.04 4.85
1162 3721 0.104120 TATGCCGACGACATTCCTGG 59.896 55.000 0.92 0.00 0.00 4.45
1163 3722 1.067060 TCTATGCCGACGACATTCCTG 59.933 52.381 0.92 0.00 0.00 3.86
1164 3723 1.067212 GTCTATGCCGACGACATTCCT 59.933 52.381 0.92 0.00 0.00 3.36
1165 3724 1.488527 GTCTATGCCGACGACATTCC 58.511 55.000 0.92 0.00 0.00 3.01
1166 3725 1.067212 AGGTCTATGCCGACGACATTC 59.933 52.381 0.92 0.00 34.75 2.67
1167 3726 1.112113 AGGTCTATGCCGACGACATT 58.888 50.000 0.92 0.00 34.75 2.71
1168 3727 0.385751 CAGGTCTATGCCGACGACAT 59.614 55.000 1.38 1.38 34.75 3.06
1169 3728 0.963856 ACAGGTCTATGCCGACGACA 60.964 55.000 0.00 0.00 34.75 4.35
1170 3729 0.525668 CACAGGTCTATGCCGACGAC 60.526 60.000 0.00 0.00 34.75 4.34
1171 3730 0.678684 TCACAGGTCTATGCCGACGA 60.679 55.000 0.00 0.00 34.75 4.20
1172 3731 0.385751 ATCACAGGTCTATGCCGACG 59.614 55.000 0.00 0.00 34.75 5.12
1173 3732 1.683917 AGATCACAGGTCTATGCCGAC 59.316 52.381 0.00 0.00 0.00 4.79
1174 3733 2.073252 AGATCACAGGTCTATGCCGA 57.927 50.000 0.00 0.00 0.00 5.54
1175 3734 2.623416 TGTAGATCACAGGTCTATGCCG 59.377 50.000 0.00 0.00 31.41 5.69
1176 3735 3.983741 GTGTAGATCACAGGTCTATGCC 58.016 50.000 0.00 0.00 45.51 4.40
1193 3752 2.827755 TCCTGGCTACATTCCTGTGTA 58.172 47.619 0.00 0.00 36.79 2.90
1194 3753 1.656587 TCCTGGCTACATTCCTGTGT 58.343 50.000 0.00 0.00 36.79 3.72
1195 3754 2.359900 GTTCCTGGCTACATTCCTGTG 58.640 52.381 0.00 0.00 36.79 3.66
1196 3755 1.066143 CGTTCCTGGCTACATTCCTGT 60.066 52.381 0.00 0.00 39.49 4.00
1197 3756 1.656652 CGTTCCTGGCTACATTCCTG 58.343 55.000 0.00 0.00 0.00 3.86
1198 3757 0.541863 CCGTTCCTGGCTACATTCCT 59.458 55.000 0.00 0.00 0.00 3.36
1199 3758 0.463833 CCCGTTCCTGGCTACATTCC 60.464 60.000 0.00 0.00 0.00 3.01
1200 3759 0.463833 CCCCGTTCCTGGCTACATTC 60.464 60.000 0.00 0.00 0.00 2.67
1201 3760 1.205460 ACCCCGTTCCTGGCTACATT 61.205 55.000 0.00 0.00 0.00 2.71
1202 3761 0.325860 TACCCCGTTCCTGGCTACAT 60.326 55.000 0.00 0.00 0.00 2.29
1203 3762 0.974010 CTACCCCGTTCCTGGCTACA 60.974 60.000 0.00 0.00 0.00 2.74
1204 3763 1.821258 CTACCCCGTTCCTGGCTAC 59.179 63.158 0.00 0.00 0.00 3.58
1205 3764 2.062177 GCTACCCCGTTCCTGGCTA 61.062 63.158 0.00 0.00 0.00 3.93
1206 3765 3.400054 GCTACCCCGTTCCTGGCT 61.400 66.667 0.00 0.00 0.00 4.75
1207 3766 4.484872 GGCTACCCCGTTCCTGGC 62.485 72.222 0.00 0.00 0.00 4.85
1208 3767 3.006728 TGGCTACCCCGTTCCTGG 61.007 66.667 0.00 0.00 35.87 4.45
1209 3768 2.584608 CTGGCTACCCCGTTCCTG 59.415 66.667 0.00 0.00 35.87 3.86
1210 3769 2.687566 CCTGGCTACCCCGTTCCT 60.688 66.667 0.00 0.00 35.87 3.36
1211 3770 1.632965 ATTCCTGGCTACCCCGTTCC 61.633 60.000 0.00 0.00 35.87 3.62
1212 3771 0.463833 CATTCCTGGCTACCCCGTTC 60.464 60.000 0.00 0.00 35.87 3.95
1213 3772 1.205460 ACATTCCTGGCTACCCCGTT 61.205 55.000 0.00 0.00 35.87 4.44
1214 3773 1.615424 ACATTCCTGGCTACCCCGT 60.615 57.895 0.00 0.00 35.87 5.28
1215 3774 1.146263 GACATTCCTGGCTACCCCG 59.854 63.158 0.00 0.00 35.87 5.73
1216 3775 1.146263 CGACATTCCTGGCTACCCC 59.854 63.158 0.00 0.00 0.00 4.95
1217 3776 0.179081 GACGACATTCCTGGCTACCC 60.179 60.000 0.00 0.00 0.00 3.69
1218 3777 0.527817 CGACGACATTCCTGGCTACC 60.528 60.000 0.00 0.00 0.00 3.18
1219 3778 0.527817 CCGACGACATTCCTGGCTAC 60.528 60.000 0.00 0.00 0.00 3.58
1220 3779 1.813859 CCGACGACATTCCTGGCTA 59.186 57.895 0.00 0.00 0.00 3.93
1221 3780 2.579201 CCGACGACATTCCTGGCT 59.421 61.111 0.00 0.00 0.00 4.75
1222 3781 3.195698 GCCGACGACATTCCTGGC 61.196 66.667 0.00 0.00 35.04 4.85
1223 3782 0.104120 TATGCCGACGACATTCCTGG 59.896 55.000 0.92 0.00 0.00 4.45
1224 3783 1.067060 TCTATGCCGACGACATTCCTG 59.933 52.381 0.92 0.00 0.00 3.86
1225 3784 1.399714 TCTATGCCGACGACATTCCT 58.600 50.000 0.92 0.00 0.00 3.36
1226 3785 2.218953 TTCTATGCCGACGACATTCC 57.781 50.000 0.92 0.00 0.00 3.01
1227 3786 2.540101 CCTTTCTATGCCGACGACATTC 59.460 50.000 0.92 0.00 0.00 2.67
1228 3787 2.550978 CCTTTCTATGCCGACGACATT 58.449 47.619 0.92 0.00 0.00 2.71
1229 3788 1.806623 GCCTTTCTATGCCGACGACAT 60.807 52.381 1.38 1.38 0.00 3.06
1230 3789 0.459585 GCCTTTCTATGCCGACGACA 60.460 55.000 0.00 0.00 0.00 4.35
1231 3790 1.152383 GGCCTTTCTATGCCGACGAC 61.152 60.000 0.00 0.00 38.00 4.34
1232 3791 1.143183 GGCCTTTCTATGCCGACGA 59.857 57.895 0.00 0.00 38.00 4.20
1233 3792 3.719214 GGCCTTTCTATGCCGACG 58.281 61.111 0.00 0.00 38.00 5.12
1237 3796 1.887707 CCGACGGCCTTTCTATGCC 60.888 63.158 0.00 0.00 44.41 4.40
1238 3797 2.534903 GCCGACGGCCTTTCTATGC 61.535 63.158 28.74 0.00 44.06 3.14
1239 3798 3.719214 GCCGACGGCCTTTCTATG 58.281 61.111 28.74 0.00 44.06 2.23
1255 3814 1.597461 GTCGGGATAGGGCCTATGC 59.403 63.158 30.77 30.77 34.69 3.14
1256 3815 1.605058 CCGTCGGGATAGGGCCTATG 61.605 65.000 30.27 16.05 34.06 2.23
1257 3816 1.305046 CCGTCGGGATAGGGCCTAT 60.305 63.158 25.93 25.93 34.06 2.57
1258 3817 2.116772 CCGTCGGGATAGGGCCTA 59.883 66.667 17.16 17.16 34.06 3.93
1259 3818 4.153330 ACCGTCGGGATAGGGCCT 62.153 66.667 17.28 12.58 36.97 5.19
1260 3819 3.925090 CACCGTCGGGATAGGGCC 61.925 72.222 17.28 0.00 36.97 5.80
1261 3820 3.148031 GACACCGTCGGGATAGGGC 62.148 68.421 17.28 0.00 36.97 5.19
1262 3821 2.496291 GGACACCGTCGGGATAGGG 61.496 68.421 17.28 0.19 36.97 3.53
1263 3822 2.842256 CGGACACCGTCGGGATAGG 61.842 68.421 17.28 2.02 42.73 2.57
1264 3823 2.719979 CGGACACCGTCGGGATAG 59.280 66.667 17.28 5.01 42.73 2.08
1274 3833 1.602165 CGGCATAGATGTACGGACACC 60.602 57.143 0.33 0.00 38.76 4.16
1275 3834 1.335810 TCGGCATAGATGTACGGACAC 59.664 52.381 0.33 0.00 38.76 3.67
1276 3835 1.335810 GTCGGCATAGATGTACGGACA 59.664 52.381 1.10 1.10 40.72 4.02
1277 3836 1.662309 CGTCGGCATAGATGTACGGAC 60.662 57.143 0.00 0.00 33.42 4.79
1278 3837 0.589708 CGTCGGCATAGATGTACGGA 59.410 55.000 8.24 0.00 33.42 4.69
1279 3838 0.386858 CCGTCGGCATAGATGTACGG 60.387 60.000 14.44 14.44 40.96 4.02
1280 3839 3.087638 CCGTCGGCATAGATGTACG 57.912 57.895 0.00 0.00 33.53 3.67
1307 3866 2.277084 AGAATGGATAACGTTGCCGAC 58.723 47.619 11.99 7.69 37.88 4.79
1308 3867 2.684001 AGAATGGATAACGTTGCCGA 57.316 45.000 11.99 0.00 37.88 5.54
1309 3868 2.542595 GGTAGAATGGATAACGTTGCCG 59.457 50.000 11.99 0.00 40.83 5.69
1310 3869 2.876550 GGGTAGAATGGATAACGTTGCC 59.123 50.000 11.99 12.80 0.00 4.52
1311 3870 2.876550 GGGGTAGAATGGATAACGTTGC 59.123 50.000 11.99 2.52 0.00 4.17
1312 3871 3.128349 CGGGGTAGAATGGATAACGTTG 58.872 50.000 11.99 0.00 0.00 4.10
1313 3872 2.767960 ACGGGGTAGAATGGATAACGTT 59.232 45.455 5.88 5.88 0.00 3.99
1314 3873 2.391678 ACGGGGTAGAATGGATAACGT 58.608 47.619 0.00 0.00 0.00 3.99
1315 3874 3.069158 AGAACGGGGTAGAATGGATAACG 59.931 47.826 0.00 0.00 0.00 3.18
1316 3875 4.100498 TCAGAACGGGGTAGAATGGATAAC 59.900 45.833 0.00 0.00 0.00 1.89
1317 3876 4.291792 TCAGAACGGGGTAGAATGGATAA 58.708 43.478 0.00 0.00 0.00 1.75
1318 3877 3.895656 CTCAGAACGGGGTAGAATGGATA 59.104 47.826 0.00 0.00 0.00 2.59
1319 3878 2.700897 CTCAGAACGGGGTAGAATGGAT 59.299 50.000 0.00 0.00 0.00 3.41
1320 3879 2.108168 CTCAGAACGGGGTAGAATGGA 58.892 52.381 0.00 0.00 0.00 3.41
1321 3880 1.831736 ACTCAGAACGGGGTAGAATGG 59.168 52.381 0.00 0.00 0.00 3.16
1322 3881 3.488721 CGTACTCAGAACGGGGTAGAATG 60.489 52.174 0.00 0.00 36.71 2.67
1323 3882 2.686915 CGTACTCAGAACGGGGTAGAAT 59.313 50.000 0.00 0.00 36.71 2.40
1324 3883 2.086869 CGTACTCAGAACGGGGTAGAA 58.913 52.381 0.00 0.00 36.71 2.10
1325 3884 1.003580 ACGTACTCAGAACGGGGTAGA 59.996 52.381 0.00 0.00 44.48 2.59
1326 3885 1.457346 ACGTACTCAGAACGGGGTAG 58.543 55.000 0.00 0.00 44.48 3.18
1327 3886 1.812571 GAACGTACTCAGAACGGGGTA 59.187 52.381 0.00 0.00 44.48 3.69
1328 3887 0.600057 GAACGTACTCAGAACGGGGT 59.400 55.000 0.00 0.00 44.48 4.95
1329 3888 0.886563 AGAACGTACTCAGAACGGGG 59.113 55.000 0.00 0.00 44.48 5.73
1330 3889 1.135460 GGAGAACGTACTCAGAACGGG 60.135 57.143 0.00 0.00 44.48 5.28
1331 3890 1.538512 TGGAGAACGTACTCAGAACGG 59.461 52.381 0.00 0.00 44.48 4.44
1332 3891 2.983402 TGGAGAACGTACTCAGAACG 57.017 50.000 0.00 0.00 45.64 3.95
1333 3892 5.061920 AGAATGGAGAACGTACTCAGAAC 57.938 43.478 0.00 0.00 38.51 3.01
1334 3893 5.125097 GGTAGAATGGAGAACGTACTCAGAA 59.875 44.000 0.00 0.00 38.51 3.02
1335 3894 4.639310 GGTAGAATGGAGAACGTACTCAGA 59.361 45.833 0.00 0.00 38.51 3.27
1336 3895 4.202030 GGGTAGAATGGAGAACGTACTCAG 60.202 50.000 0.00 0.00 38.51 3.35
1387 3946 3.313874 CTGGAGAACAGCGGGGAT 58.686 61.111 0.00 0.00 40.97 3.85
1759 4318 2.631160 TCATTGGAGTGACCGTTGTT 57.369 45.000 0.00 0.00 42.61 2.83
1927 4487 8.922058 TGATGATGAATATGTGATGACGATAG 57.078 34.615 0.00 0.00 46.19 2.08
1928 4488 9.525409 GATGATGATGAATATGTGATGACGATA 57.475 33.333 0.00 0.00 0.00 2.92
3392 6637 4.467084 ACGGACGGCGATGGCATT 62.467 61.111 16.62 0.00 42.47 3.56
3540 8751 4.999939 GTTGCAAACGCCCGGCAG 63.000 66.667 10.77 4.95 36.92 4.85
3818 9033 4.798907 GTGATGACACGGTAGTAGACATTG 59.201 45.833 0.00 0.00 37.28 2.82
3821 9036 2.751259 GGTGATGACACGGTAGTAGACA 59.249 50.000 0.00 0.00 46.77 3.41
4443 10341 7.806487 CGTCAATATTACTAAATACTCGGAGCA 59.194 37.037 4.58 0.00 30.42 4.26
4486 10384 2.975410 TGACACGGTAGTAGACGTTG 57.025 50.000 0.00 0.00 42.04 4.10
4606 10507 2.358619 GGGGTAGCAATGCCACCA 59.641 61.111 23.16 0.00 33.78 4.17
4725 11301 3.021695 TCCTATGGACTGACCTAACACG 58.978 50.000 0.00 0.00 39.86 4.49
4866 11442 0.250124 CCCTGTAGCGTTTGACCACA 60.250 55.000 0.00 0.00 0.00 4.17
4915 11491 4.329545 ACGCTCCGGTGGCATTGT 62.330 61.111 18.63 8.50 0.00 2.71
4939 11515 1.522569 GCGGCTTGTATGAGGTCCT 59.477 57.895 0.00 0.00 0.00 3.85
6044 12643 0.246635 GGCCATATCTATGCCGACGT 59.753 55.000 0.00 0.00 32.40 4.34
6114 12713 2.887568 CTCAGCGGCACATCGTCC 60.888 66.667 1.45 0.00 0.00 4.79
6229 12846 2.350895 CTCGCCACCATGGTCCAA 59.649 61.111 16.53 0.00 40.46 3.53
6257 12874 1.825242 CGATGGAGGCTCTATGGAGGT 60.825 57.143 18.78 0.00 39.80 3.85
6272 12889 2.350522 CAGTCCTGAGGAAAACGATGG 58.649 52.381 0.96 0.00 31.38 3.51
6274 12891 1.279271 CCCAGTCCTGAGGAAAACGAT 59.721 52.381 0.96 0.00 31.38 3.73
6275 12892 0.685097 CCCAGTCCTGAGGAAAACGA 59.315 55.000 0.96 0.00 31.38 3.85
6276 12893 0.321653 CCCCAGTCCTGAGGAAAACG 60.322 60.000 0.96 0.00 31.38 3.60
6277 12894 0.609406 GCCCCAGTCCTGAGGAAAAC 60.609 60.000 0.96 0.00 31.38 2.43
6278 12895 0.772124 AGCCCCAGTCCTGAGGAAAA 60.772 55.000 0.96 0.00 31.38 2.29
6279 12896 0.772124 AAGCCCCAGTCCTGAGGAAA 60.772 55.000 0.96 0.00 31.38 3.13
6280 12897 1.151810 AAGCCCCAGTCCTGAGGAA 60.152 57.895 0.96 0.00 31.38 3.36
6281 12898 1.613630 GAAGCCCCAGTCCTGAGGA 60.614 63.158 0.00 0.00 28.73 3.71
6282 12899 1.204113 AAGAAGCCCCAGTCCTGAGG 61.204 60.000 0.00 0.00 0.00 3.86
6283 12900 0.251634 GAAGAAGCCCCAGTCCTGAG 59.748 60.000 0.00 0.00 0.00 3.35
6284 12901 1.201429 GGAAGAAGCCCCAGTCCTGA 61.201 60.000 0.00 0.00 0.00 3.86
6305 12922 3.560068 CCAAGACAGCGAACAAACTAACT 59.440 43.478 0.00 0.00 0.00 2.24
6319 12941 2.886523 TGGAAAATGTGAGCCAAGACAG 59.113 45.455 0.00 0.00 0.00 3.51
6322 12944 3.306225 GCAATGGAAAATGTGAGCCAAGA 60.306 43.478 0.00 0.00 33.51 3.02
6417 13086 6.432783 GGAGAGCAATTCTAGCTAGTATCAGA 59.567 42.308 20.10 0.00 43.58 3.27
6458 13127 0.604511 CCGGGACACTGTGGTTAACC 60.605 60.000 18.27 18.27 0.00 2.85
6476 13145 1.520342 GCTCTCCAGCACATCGTCC 60.520 63.158 0.00 0.00 46.06 4.79
6486 13155 0.034767 TTGGCCTTCATGCTCTCCAG 60.035 55.000 3.32 0.00 0.00 3.86
6515 13184 3.435186 GCGGGCAGCTGGAAGAAC 61.435 66.667 17.12 0.00 44.04 3.01
6527 13196 1.807573 CTTCTTCGTCTCTGCGGGC 60.808 63.158 0.00 0.00 0.00 6.13
6614 13283 1.593787 CATGTCAGCCCAGTCGAGT 59.406 57.895 0.00 0.00 0.00 4.18
6669 13338 0.324943 TGGTCAGGCCAGAACTTAGC 59.675 55.000 14.99 0.00 43.61 3.09
6732 13433 2.954753 GCGTGACAGGCAACGAAGG 61.955 63.158 15.01 0.00 46.39 3.46
6764 13474 8.668510 AGCATCATTCCATTGTACTAACTAAG 57.331 34.615 0.00 0.00 0.00 2.18
6765 13475 9.461312 AAAGCATCATTCCATTGTACTAACTAA 57.539 29.630 0.00 0.00 0.00 2.24
6767 13477 7.944729 AAAGCATCATTCCATTGTACTAACT 57.055 32.000 0.00 0.00 0.00 2.24
6768 13478 8.863049 CAAAAAGCATCATTCCATTGTACTAAC 58.137 33.333 0.00 0.00 0.00 2.34
6769 13479 8.034215 CCAAAAAGCATCATTCCATTGTACTAA 58.966 33.333 0.00 0.00 0.00 2.24
6770 13480 7.178274 ACCAAAAAGCATCATTCCATTGTACTA 59.822 33.333 0.00 0.00 0.00 1.82
6819 13529 4.955811 TCACCGCACCAGAATATCTATT 57.044 40.909 0.00 0.00 0.00 1.73
6846 13556 4.382685 CGTAGCCAAAAGGGAGTCTGATAA 60.383 45.833 0.00 0.00 40.01 1.75
6922 13632 7.395489 AGTTTATTCTGACTTTCTGCATTCCAT 59.605 33.333 0.00 0.00 0.00 3.41
6959 13669 0.385223 CTTTCTCTGCTTGTGCGCAC 60.385 55.000 33.11 33.11 43.34 5.34
6965 13675 2.213499 CCAACGACTTTCTCTGCTTGT 58.787 47.619 0.00 0.00 0.00 3.16
7112 13822 6.097696 TCACCTCAAACATATCTCCGATGTTA 59.902 38.462 1.70 0.00 44.75 2.41
7177 13890 6.265422 TCTCTAACATCTGATAATCGGCAGAA 59.735 38.462 0.00 0.00 43.63 3.02
7187 13900 6.072452 CGCCATACAGTCTCTAACATCTGATA 60.072 42.308 0.00 0.00 0.00 2.15
7226 13945 6.949578 AACAACGAAAATGCATGGATTTAG 57.050 33.333 23.36 21.00 0.00 1.85
7233 13982 5.337512 GCAAATCAAACAACGAAAATGCATG 59.662 36.000 0.00 0.00 0.00 4.06
7252 14001 2.154462 CCTGTCCTCGTCAAAGCAAAT 58.846 47.619 0.00 0.00 0.00 2.32
7349 14101 2.027625 GTCTGGGAACTGGAACGCG 61.028 63.158 3.53 3.53 0.00 6.01
7358 14110 0.400213 TGGTGTGGATGTCTGGGAAC 59.600 55.000 0.00 0.00 0.00 3.62
7391 14143 2.187958 TCATGTCCGGTCATCTCCTTT 58.812 47.619 11.47 0.00 0.00 3.11
7432 14184 1.205655 TCATGAAGCTCTCAAGGTCCG 59.794 52.381 0.00 0.00 37.67 4.79
7439 14191 5.936187 AGAAGATCTTCATGAAGCTCTCA 57.064 39.130 31.62 16.71 41.45 3.27
7570 14322 3.971245 AAGAAGAACCGAAGAGAGCAT 57.029 42.857 0.00 0.00 0.00 3.79
7583 14335 4.644234 TGTGCACTTCATTGGAAAGAAGAA 59.356 37.500 19.41 0.00 42.95 2.52
7603 14355 0.956633 ACTCCATTGCAAGCAGTGTG 59.043 50.000 15.00 10.30 32.72 3.82
7617 14369 2.174639 TGCCTCCTGAAAAAGAACTCCA 59.825 45.455 0.00 0.00 0.00 3.86
7626 14378 5.163457 ACGAAGAAATTTTGCCTCCTGAAAA 60.163 36.000 0.00 0.00 0.00 2.29
7631 14383 4.937201 AAACGAAGAAATTTTGCCTCCT 57.063 36.364 0.00 0.00 0.00 3.69
7696 14448 0.108992 GCATCCGACACCGAGTTACA 60.109 55.000 0.00 0.00 38.22 2.41
7708 14460 3.161450 GGTAGCCAGGGCATCCGA 61.161 66.667 13.63 0.00 44.88 4.55
7711 14463 1.228367 CATGGGTAGCCAGGGCATC 60.228 63.158 20.08 4.72 44.88 3.91
7744 14496 2.124411 GCCAATCAAGGTACCTCCCTA 58.876 52.381 16.64 1.15 36.75 3.53
7745 14497 0.919710 GCCAATCAAGGTACCTCCCT 59.080 55.000 16.64 0.00 36.75 4.20
7752 14504 1.383456 GCGGCATGCCAATCAAGGTA 61.383 55.000 34.93 0.00 37.76 3.08
7754 14506 2.105528 GCGGCATGCCAATCAAGG 59.894 61.111 34.93 18.36 37.76 3.61
7768 14525 0.319211 TACAACGTCAGGAACAGCGG 60.319 55.000 0.00 0.00 0.00 5.52
7782 14539 3.618690 AGCCACCAGAGAAGATACAAC 57.381 47.619 0.00 0.00 0.00 3.32
7809 14566 7.307751 GCTTTATTAACATACGGATGCAGCTAA 60.308 37.037 7.78 1.18 36.43 3.09
7912 14704 0.035317 ATGCCCGATACATGCGTCAT 59.965 50.000 0.00 0.00 0.00 3.06
7917 14709 2.680913 GCCGATGCCCGATACATGC 61.681 63.158 0.00 0.00 41.76 4.06
7929 14721 2.350899 TGATTGTTTGCAAGCCGATG 57.649 45.000 11.02 0.00 40.02 3.84
7941 14733 7.439381 ACTTCAAATTTCAGAGCATGATTGTT 58.561 30.769 0.00 0.00 37.89 2.83
7945 14737 7.039223 AGGAAACTTCAAATTTCAGAGCATGAT 60.039 33.333 0.00 0.00 37.44 2.45
7946 14738 6.266103 AGGAAACTTCAAATTTCAGAGCATGA 59.734 34.615 0.00 0.00 37.44 3.07
7949 14741 5.360714 ACAGGAAACTTCAAATTTCAGAGCA 59.639 36.000 0.00 0.00 40.21 4.26
7950 14742 5.836347 ACAGGAAACTTCAAATTTCAGAGC 58.164 37.500 0.00 0.00 40.21 4.09
7959 14754 8.705594 AGCTAGCTATATACAGGAAACTTCAAA 58.294 33.333 17.69 0.00 40.21 2.69
8022 14821 0.322816 ATGAGCCCATGACGTTGCTT 60.323 50.000 0.00 0.00 33.41 3.91
8024 14823 3.909662 ATGAGCCCATGACGTTGC 58.090 55.556 0.00 0.00 0.00 4.17
8036 14835 0.102481 CATCAAGCAAGGCCATGAGC 59.898 55.000 13.26 6.38 42.60 4.26
8037 14836 0.744874 CCATCAAGCAAGGCCATGAG 59.255 55.000 13.26 0.40 30.61 2.90
8043 15001 0.685458 ATCCCACCATCAAGCAAGGC 60.685 55.000 0.00 0.00 0.00 4.35
8053 15011 0.326904 TCTCCTGAGCATCCCACCAT 60.327 55.000 0.00 0.00 0.00 3.55
8071 15029 3.487372 ACCTTTACCCAGCTCTTTTGTC 58.513 45.455 0.00 0.00 0.00 3.18
8072 15030 3.595190 ACCTTTACCCAGCTCTTTTGT 57.405 42.857 0.00 0.00 0.00 2.83
8130 15088 4.072131 TGTTTCTGGGATTAAGCACTGAC 58.928 43.478 1.65 0.00 0.00 3.51
8136 15094 4.220602 ACCACAATGTTTCTGGGATTAAGC 59.779 41.667 0.00 0.00 0.00 3.09
8147 15105 3.932545 TGCCATGTACCACAATGTTTC 57.067 42.857 0.00 0.00 0.00 2.78
8155 15113 6.699575 AGATCTAAAAATGCCATGTACCAC 57.300 37.500 0.00 0.00 0.00 4.16
8189 15147 6.101274 AGAGGGACCCTAAACTTACTATCA 57.899 41.667 14.87 0.00 31.76 2.15
8203 15161 2.736670 ATGCAACATAAGAGGGACCC 57.263 50.000 0.59 0.59 0.00 4.46
8228 15186 2.093447 ACGGCACTCATTCCTTCCTAAG 60.093 50.000 0.00 0.00 0.00 2.18
8240 15198 6.156748 ACACTATATCAATAACGGCACTCA 57.843 37.500 0.00 0.00 0.00 3.41
8257 15271 6.265196 CAGCAGAGGAGATAAGAGAACACTAT 59.735 42.308 0.00 0.00 0.00 2.12
8277 15293 0.890542 TGTTAGCAGGTTGGCAGCAG 60.891 55.000 3.14 0.00 35.83 4.24
8283 15299 2.151202 ACGACATTGTTAGCAGGTTGG 58.849 47.619 0.00 0.00 0.00 3.77
8309 15325 1.376553 GGAGGTGGCTCTGCTGAAC 60.377 63.158 0.00 0.00 0.00 3.18
8326 15343 3.702330 TGCGACAGTCTACAATTATCGG 58.298 45.455 0.00 0.00 0.00 4.18
8374 15416 4.914983 TGATTGATCCAAGACTGAAAGCT 58.085 39.130 0.00 0.00 37.60 3.74
8410 15452 1.848388 AGATGAATGGCCACCTCATCA 59.152 47.619 37.42 25.40 45.21 3.07
8413 15455 3.718434 AGAATAGATGAATGGCCACCTCA 59.282 43.478 19.07 19.07 0.00 3.86
8481 16210 1.856014 GCAAATAAGCATGGCGTCGTC 60.856 52.381 0.00 0.00 0.00 4.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.