Multiple sequence alignment - TraesCS3A01G521500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G521500 chr3A 100.000 5068 0 0 1 5068 738128573 738133640 0.000000e+00 9359.0
1 TraesCS3A01G521500 chr3A 82.682 537 67 10 1 515 738109583 738110115 2.150000e-123 453.0
2 TraesCS3A01G521500 chr3A 91.139 158 13 1 4912 5068 319962474 319962317 3.970000e-51 213.0
3 TraesCS3A01G521500 chr3A 97.590 83 2 0 4835 4917 535201403 535201321 5.290000e-30 143.0
4 TraesCS3A01G521500 chr3A 94.737 76 4 0 1001 1076 11612772 11612697 8.910000e-23 119.0
5 TraesCS3A01G521500 chr3A 82.828 99 6 10 2096 2188 629669411 629669318 1.510000e-10 78.7
6 TraesCS3A01G521500 chr3A 74.879 207 32 11 197 396 737944996 737944803 5.440000e-10 76.8
7 TraesCS3A01G521500 chr3D 89.860 1213 79 23 3537 4725 606082563 606081371 0.000000e+00 1519.0
8 TraesCS3A01G521500 chr3D 90.009 1081 53 26 742 1804 606085986 606084943 0.000000e+00 1347.0
9 TraesCS3A01G521500 chr3D 93.540 743 46 2 2180 2921 606084371 606083630 0.000000e+00 1105.0
10 TraesCS3A01G521500 chr3D 92.600 473 19 2 3007 3463 606083627 606083155 0.000000e+00 665.0
11 TraesCS3A01G521500 chr3D 82.987 529 72 8 1 515 606148147 606147623 3.570000e-126 462.0
12 TraesCS3A01G521500 chr3D 90.323 310 19 6 1 299 606086773 606086464 3.680000e-106 396.0
13 TraesCS3A01G521500 chr3D 90.099 303 26 3 1798 2099 606084669 606084370 1.710000e-104 390.0
14 TraesCS3A01G521500 chr3D 89.147 258 21 3 511 761 606086258 606086001 1.060000e-81 315.0
15 TraesCS3A01G521500 chr3D 74.818 548 104 16 1 517 606134316 606133772 3.070000e-52 217.0
16 TraesCS3A01G521500 chr3D 88.068 176 17 2 342 517 606086460 606086289 6.650000e-49 206.0
17 TraesCS3A01G521500 chr3D 86.747 166 20 2 4904 5068 15022601 15022765 3.120000e-42 183.0
18 TraesCS3A01G521500 chr3D 96.842 95 1 2 2914 3007 561754057 561753964 1.890000e-34 158.0
19 TraesCS3A01G521500 chr3D 97.531 81 2 0 4835 4915 14804251 14804171 6.840000e-29 139.0
20 TraesCS3A01G521500 chr3D 95.349 86 3 1 3454 3539 606082906 606082822 8.850000e-28 135.0
21 TraesCS3A01G521500 chr3D 87.500 96 11 1 4487 4582 58127753 58127659 5.360000e-20 110.0
22 TraesCS3A01G521500 chr3D 76.549 226 35 11 184 403 606305264 606305477 1.930000e-19 108.0
23 TraesCS3A01G521500 chr3D 94.872 39 1 1 2148 2186 438606854 438606817 5.480000e-05 60.2
24 TraesCS3A01G521500 chr3B 87.988 1282 77 43 511 1739 816004927 816006184 0.000000e+00 1443.0
25 TraesCS3A01G521500 chr3B 92.992 899 47 9 3537 4422 816008262 816009157 0.000000e+00 1297.0
26 TraesCS3A01G521500 chr3B 96.898 548 15 1 2371 2918 816006934 816007479 0.000000e+00 917.0
27 TraesCS3A01G521500 chr3B 93.359 527 24 7 3003 3526 816007481 816007999 0.000000e+00 769.0
28 TraesCS3A01G521500 chr3B 91.304 529 28 6 1 515 816004361 816004885 0.000000e+00 706.0
29 TraesCS3A01G521500 chr3B 90.664 482 38 5 1323 1800 406133577 406133099 7.160000e-178 634.0
30 TraesCS3A01G521500 chr3B 92.953 298 18 3 1797 2093 816006492 816006787 1.010000e-116 431.0
31 TraesCS3A01G521500 chr3B 77.341 534 94 17 5 515 815974857 815975386 1.780000e-74 291.0
32 TraesCS3A01G521500 chr3B 91.772 158 12 1 4912 5068 377115282 377115125 8.540000e-53 219.0
33 TraesCS3A01G521500 chr3B 93.333 150 6 1 2180 2329 816006790 816006935 8.540000e-53 219.0
34 TraesCS3A01G521500 chr3B 95.349 129 3 3 4712 4837 39464849 39464977 8.600000e-48 202.0
35 TraesCS3A01G521500 chr3B 86.239 109 15 0 4484 4592 172008621 172008729 8.910000e-23 119.0
36 TraesCS3A01G521500 chr3B 76.355 203 33 11 187 386 815869606 815869416 1.500000e-15 95.3
37 TraesCS3A01G521500 chr3B 82.418 91 8 7 2103 2189 793346567 793346481 7.040000e-09 73.1
38 TraesCS3A01G521500 chr6A 90.964 166 13 2 4904 5068 315391485 315391649 6.600000e-54 222.0
39 TraesCS3A01G521500 chr6A 96.491 114 4 0 4724 4837 465626639 465626526 6.700000e-44 189.0
40 TraesCS3A01G521500 chr6A 87.975 158 13 5 4904 5059 436534084 436534237 1.120000e-41 182.0
41 TraesCS3A01G521500 chr6A 95.833 96 2 2 2908 3003 201248384 201248477 2.440000e-33 154.0
42 TraesCS3A01G521500 chr6A 97.143 35 0 1 2154 2188 536996277 536996244 1.970000e-04 58.4
43 TraesCS3A01G521500 chr6A 89.362 47 2 3 2145 2189 21518372 21518417 7.090000e-04 56.5
44 TraesCS3A01G521500 chr5D 91.139 158 13 1 4912 5068 7559831 7559988 3.970000e-51 213.0
45 TraesCS3A01G521500 chr5D 94.444 126 4 2 4712 4836 484404572 484404695 1.860000e-44 191.0
46 TraesCS3A01G521500 chr5D 86.000 100 13 1 4484 4583 543459737 543459639 6.940000e-19 106.0
47 TraesCS3A01G521500 chr5D 81.081 111 7 5 4629 4725 5223772 5223882 5.440000e-10 76.8
48 TraesCS3A01G521500 chr5D 100.000 33 0 0 2096 2128 494472248 494472280 1.520000e-05 62.1
49 TraesCS3A01G521500 chr5D 78.723 94 11 8 2098 2186 437601501 437601590 3.000000e-03 54.7
50 TraesCS3A01G521500 chr7D 87.952 166 18 2 4904 5068 460516285 460516449 1.440000e-45 195.0
51 TraesCS3A01G521500 chr7D 93.496 123 6 2 4716 4836 491797805 491797683 1.120000e-41 182.0
52 TraesCS3A01G521500 chr7D 96.512 86 2 1 4835 4920 633383737 633383653 1.900000e-29 141.0
53 TraesCS3A01G521500 chr7D 86.735 98 13 0 4484 4581 176125161 176125258 5.360000e-20 110.0
54 TraesCS3A01G521500 chr7D 83.784 111 16 1 4479 4587 633462836 633462946 2.500000e-18 104.0
55 TraesCS3A01G521500 chr7D 82.222 90 4 9 2098 2181 154189432 154189349 3.270000e-07 67.6
56 TraesCS3A01G521500 chr7A 96.491 114 4 0 4724 4837 671487482 671487595 6.700000e-44 189.0
57 TraesCS3A01G521500 chr7A 94.231 104 3 3 2901 3003 473897475 473897576 6.790000e-34 156.0
58 TraesCS3A01G521500 chr7A 84.270 89 6 6 2103 2187 293098886 293098970 4.210000e-11 80.5
59 TraesCS3A01G521500 chr7A 82.828 99 6 10 2097 2189 129876938 129877031 1.510000e-10 78.7
60 TraesCS3A01G521500 chr7A 100.000 28 0 0 4425 4452 194790953 194790926 9.000000e-03 52.8
61 TraesCS3A01G521500 chr2D 93.651 126 7 1 4713 4837 484905223 484905348 2.410000e-43 187.0
62 TraesCS3A01G521500 chr2D 97.561 82 2 0 4835 4916 249986099 249986180 1.900000e-29 141.0
63 TraesCS3A01G521500 chr2D 93.478 92 4 2 4835 4924 538954928 538954837 8.850000e-28 135.0
64 TraesCS3A01G521500 chr2D 90.541 74 7 0 1003 1076 96100451 96100378 1.160000e-16 99.0
65 TraesCS3A01G521500 chr2D 82.301 113 20 0 4484 4596 635994389 635994277 1.160000e-16 99.0
66 TraesCS3A01G521500 chr2D 81.720 93 5 11 2103 2189 154890192 154890106 3.270000e-07 67.6
67 TraesCS3A01G521500 chr2D 81.395 86 12 3 2103 2186 540811414 540811497 3.270000e-07 67.6
68 TraesCS3A01G521500 chr2D 100.000 32 0 0 2097 2128 633886870 633886839 5.480000e-05 60.2
69 TraesCS3A01G521500 chr2D 89.583 48 2 3 2145 2190 203527117 203527163 1.970000e-04 58.4
70 TraesCS3A01G521500 chr6D 93.600 125 7 1 4714 4837 327022164 327022040 8.660000e-43 185.0
71 TraesCS3A01G521500 chr6D 92.857 126 9 0 4712 4837 26033943 26033818 3.120000e-42 183.0
72 TraesCS3A01G521500 chr6D 92.857 126 6 3 4715 4837 87389550 87389425 4.030000e-41 180.0
73 TraesCS3A01G521500 chr6D 85.321 109 16 0 4484 4592 379335361 379335469 4.150000e-21 113.0
74 TraesCS3A01G521500 chr6D 80.620 129 23 2 4484 4610 174529480 174529608 1.160000e-16 99.0
75 TraesCS3A01G521500 chr6D 83.133 83 9 2 4484 4566 366678806 366678883 2.530000e-08 71.3
76 TraesCS3A01G521500 chr6D 95.455 44 2 0 4523 4566 447178713 447178670 2.530000e-08 71.3
77 TraesCS3A01G521500 chr6D 87.931 58 7 0 4523 4580 45724853 45724796 9.100000e-08 69.4
78 TraesCS3A01G521500 chr6D 79.612 103 9 9 2097 2192 78083078 78083175 4.240000e-06 63.9
79 TraesCS3A01G521500 chr6D 94.872 39 1 1 2150 2188 390732556 390732519 5.480000e-05 60.2
80 TraesCS3A01G521500 chr6D 100.000 30 0 0 2159 2188 390721066 390721037 7.090000e-04 56.5
81 TraesCS3A01G521500 chr5A 86.747 166 19 3 4904 5068 530254429 530254592 1.120000e-41 182.0
82 TraesCS3A01G521500 chr5A 84.181 177 24 4 4893 5068 320171946 320172119 8.730000e-38 169.0
83 TraesCS3A01G521500 chr5A 97.802 91 2 0 2915 3005 45001925 45001835 1.890000e-34 158.0
84 TraesCS3A01G521500 chr4A 87.195 164 16 4 4907 5068 472392086 472391926 1.120000e-41 182.0
85 TraesCS3A01G521500 chr4A 85.119 168 19 6 4902 5068 608039516 608039354 3.140000e-37 167.0
86 TraesCS3A01G521500 chr4A 81.875 160 23 5 4907 5065 658355125 658354971 4.120000e-26 130.0
87 TraesCS3A01G521500 chr4A 78.992 119 11 5 4620 4725 38908564 38908447 9.100000e-08 69.4
88 TraesCS3A01G521500 chr4A 95.122 41 1 1 2148 2188 734390833 734390794 4.240000e-06 63.9
89 TraesCS3A01G521500 chr7B 97.826 92 2 0 2919 3010 104073371 104073280 5.250000e-35 159.0
90 TraesCS3A01G521500 chr7B 95.833 96 4 0 2917 3012 100745925 100745830 6.790000e-34 156.0
91 TraesCS3A01G521500 chr7B 94.175 103 5 1 2919 3021 546253893 546253792 6.790000e-34 156.0
92 TraesCS3A01G521500 chr7B 81.319 91 11 5 2103 2190 292839284 292839371 9.100000e-08 69.4
93 TraesCS3A01G521500 chr7B 81.111 90 9 7 2103 2188 144686332 144686247 1.180000e-06 65.8
94 TraesCS3A01G521500 chr2B 96.809 94 3 0 2918 3011 254692216 254692309 1.890000e-34 158.0
95 TraesCS3A01G521500 chr2B 86.239 109 15 0 4484 4592 175412408 175412516 8.910000e-23 119.0
96 TraesCS3A01G521500 chr2B 90.541 74 7 0 1002 1075 744402461 744402388 1.160000e-16 99.0
97 TraesCS3A01G521500 chr2B 84.884 86 9 4 2103 2186 555851327 555851410 3.250000e-12 84.2
98 TraesCS3A01G521500 chr4B 96.809 94 2 1 2911 3003 30369969 30370062 6.790000e-34 156.0
99 TraesCS3A01G521500 chr4B 97.590 83 2 0 4834 4916 517263270 517263352 5.290000e-30 143.0
100 TraesCS3A01G521500 chr4B 85.981 107 13 2 4473 4578 322692934 322693039 4.150000e-21 113.0
101 TraesCS3A01G521500 chr4B 86.735 98 13 0 4484 4581 649601931 649602028 5.360000e-20 110.0
102 TraesCS3A01G521500 chr4B 85.714 98 14 0 4495 4592 324420523 324420426 2.500000e-18 104.0
103 TraesCS3A01G521500 chr4D 97.531 81 2 0 4835 4915 487284362 487284282 6.840000e-29 139.0
104 TraesCS3A01G521500 chr4D 92.105 76 6 0 1001 1076 497503579 497503654 1.930000e-19 108.0
105 TraesCS3A01G521500 chr4D 88.889 72 8 0 4510 4581 25432117 25432046 6.990000e-14 89.8
106 TraesCS3A01G521500 chr4D 88.406 69 8 0 4512 4580 237553150 237553082 3.250000e-12 84.2
107 TraesCS3A01G521500 chr4D 100.000 28 0 0 2156 2183 19176361 19176334 9.000000e-03 52.8
108 TraesCS3A01G521500 chr1D 97.531 81 2 0 4836 4916 299573256 299573336 6.840000e-29 139.0
109 TraesCS3A01G521500 chr1D 94.737 76 4 0 1001 1076 164361072 164361147 8.910000e-23 119.0
110 TraesCS3A01G521500 chr1D 94.667 75 4 0 1001 1075 437569085 437569011 3.210000e-22 117.0
111 TraesCS3A01G521500 chr1D 85.321 109 16 0 4484 4592 469813404 469813512 4.150000e-21 113.0
112 TraesCS3A01G521500 chr1D 89.412 85 8 1 4484 4568 215066222 215066305 6.940000e-19 106.0
113 TraesCS3A01G521500 chr1D 85.714 98 14 0 4484 4581 462292401 462292304 2.500000e-18 104.0
114 TraesCS3A01G521500 chr1D 84.848 99 14 1 4484 4582 214849794 214849697 1.160000e-16 99.0
115 TraesCS3A01G521500 chr1D 89.189 74 8 0 1003 1076 16291896 16291969 5.400000e-15 93.5
116 TraesCS3A01G521500 chr1D 82.558 86 11 4 2103 2186 476841747 476841664 7.040000e-09 73.1
117 TraesCS3A01G521500 chr1D 78.571 98 18 3 2091 2186 436100491 436100587 1.520000e-05 62.1
118 TraesCS3A01G521500 chr2A 90.000 100 7 3 4835 4934 735566811 735566715 5.330000e-25 126.0
119 TraesCS3A01G521500 chr1B 86.486 111 15 0 4482 4592 65704453 65704563 6.890000e-24 122.0
120 TraesCS3A01G521500 chr1B 88.119 101 11 1 4484 4584 473555727 473555628 8.910000e-23 119.0
121 TraesCS3A01G521500 chr1B 81.538 130 20 4 4486 4613 481708556 481708429 2.500000e-18 104.0
122 TraesCS3A01G521500 chr1B 80.808 99 12 6 2094 2188 164770362 164770457 2.530000e-08 71.3
123 TraesCS3A01G521500 chr5B 85.321 109 15 1 4474 4581 220707528 220707636 1.490000e-20 111.0
124 TraesCS3A01G521500 chr5B 83.193 119 18 2 4484 4600 191034275 191034157 1.930000e-19 108.0
125 TraesCS3A01G521500 chr5B 91.250 80 6 1 998 1076 669731357 669731278 1.930000e-19 108.0
126 TraesCS3A01G521500 chr5B 93.333 45 1 2 2145 2188 591137533 591137490 1.180000e-06 65.8
127 TraesCS3A01G521500 chrUn 82.105 95 17 0 4484 4578 84028506 84028412 1.170000e-11 82.4
128 TraesCS3A01G521500 chrUn 83.133 83 14 0 4484 4566 265075902 265075984 5.440000e-10 76.8
129 TraesCS3A01G521500 chrUn 84.932 73 11 0 4520 4592 16890403 16890331 1.960000e-09 75.0
130 TraesCS3A01G521500 chrUn 93.182 44 3 0 4523 4566 4595987 4596030 1.180000e-06 65.8
131 TraesCS3A01G521500 chrUn 93.182 44 3 0 4523 4566 124205835 124205878 1.180000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G521500 chr3A 738128573 738133640 5067 False 9359.000000 9359 100.000000 1 5068 1 chr3A.!!$F2 5067
1 TraesCS3A01G521500 chr3A 738109583 738110115 532 False 453.000000 453 82.682000 1 515 1 chr3A.!!$F1 514
2 TraesCS3A01G521500 chr3D 606081371 606086773 5402 True 675.333333 1519 90.999444 1 4725 9 chr3D.!!$R7 4724
3 TraesCS3A01G521500 chr3D 606147623 606148147 524 True 462.000000 462 82.987000 1 515 1 chr3D.!!$R6 514
4 TraesCS3A01G521500 chr3D 606133772 606134316 544 True 217.000000 217 74.818000 1 517 1 chr3D.!!$R5 516
5 TraesCS3A01G521500 chr3B 816004361 816009157 4796 False 826.000000 1443 92.689571 1 4422 7 chr3B.!!$F4 4421
6 TraesCS3A01G521500 chr3B 815974857 815975386 529 False 291.000000 291 77.341000 5 515 1 chr3B.!!$F3 510

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
507 551 0.474184 ATTAAGGATCAGCCACGGGG 59.526 55.0 0.0 0.0 40.02 5.73 F
861 1002 0.605589 CTCCGCCCCTTCGTTTTTCT 60.606 55.0 0.0 0.0 0.00 2.52 F
2325 2836 0.603707 TGCCTGACACTGTAGCTTGC 60.604 55.0 0.0 0.0 0.00 4.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2165 2676 0.115745 AAACTACTCCCTCCGTCCCA 59.884 55.0 0.00 0.0 0.00 4.37 R
2828 3340 0.664224 TCTGACGCACACTAACGACA 59.336 50.0 0.00 0.0 33.31 4.35 R
4296 5363 0.533978 TGCGGCAGCTCAAACAGTTA 60.534 50.0 10.92 0.0 45.42 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 2.539274 CACCTTTGAACACGCCATTTTG 59.461 45.455 0.00 0.00 0.00 2.44
30 31 2.428890 ACCTTTGAACACGCCATTTTGA 59.571 40.909 0.00 0.00 0.00 2.69
38 40 2.560542 ACACGCCATTTTGATTAAGCCA 59.439 40.909 0.00 0.00 0.00 4.75
40 42 4.183101 CACGCCATTTTGATTAAGCCAAT 58.817 39.130 0.00 0.00 0.00 3.16
427 471 2.730672 CGGAAACCAGAAGCGCGAG 61.731 63.158 12.10 0.00 0.00 5.03
438 482 2.985512 AAGCGCGAGAGGATGATGCC 62.986 60.000 12.10 0.00 0.00 4.40
439 483 2.732468 CGCGAGAGGATGATGCCG 60.732 66.667 0.00 0.00 0.00 5.69
440 484 2.419198 GCGAGAGGATGATGCCGT 59.581 61.111 0.00 0.00 0.00 5.68
441 485 1.660355 GCGAGAGGATGATGCCGTA 59.340 57.895 0.00 0.00 0.00 4.02
507 551 0.474184 ATTAAGGATCAGCCACGGGG 59.526 55.000 0.00 0.00 40.02 5.73
739 839 8.776680 ATTGTAATAATCGTTTATTGTTCGGC 57.223 30.769 17.75 5.65 38.26 5.54
754 854 3.550656 GGCCGACGAGACAAACTG 58.449 61.111 0.00 0.00 0.00 3.16
817 954 1.383523 GGCTTCGATAGGCTTTGCTT 58.616 50.000 11.92 0.00 45.60 3.91
818 955 1.332065 GGCTTCGATAGGCTTTGCTTC 59.668 52.381 11.92 0.00 45.60 3.86
819 956 2.284190 GCTTCGATAGGCTTTGCTTCT 58.716 47.619 0.00 0.00 0.00 2.85
861 1002 0.605589 CTCCGCCCCTTCGTTTTTCT 60.606 55.000 0.00 0.00 0.00 2.52
862 1003 0.686224 TCCGCCCCTTCGTTTTTCTA 59.314 50.000 0.00 0.00 0.00 2.10
1296 1454 1.134491 CCCCCTCTCGTTTATGTGGTC 60.134 57.143 0.00 0.00 0.00 4.02
1359 1521 3.727726 CTGGGTGGGTGAAATTTTGTTC 58.272 45.455 0.00 0.00 0.00 3.18
1362 1524 3.494223 GGGTGGGTGAAATTTTGTTCCTG 60.494 47.826 0.00 0.00 0.00 3.86
1435 1601 2.553079 TTTGCGTTGGTCAGTTTGTC 57.447 45.000 0.00 0.00 0.00 3.18
1441 1607 0.745128 TTGGTCAGTTTGTCGCGGTT 60.745 50.000 6.13 0.00 0.00 4.44
1445 1611 1.136336 GTCAGTTTGTCGCGGTTCATC 60.136 52.381 6.13 1.13 0.00 2.92
1480 1650 2.351060 GCCGTGGTTAGTGGTTAAAAGC 60.351 50.000 0.00 0.00 0.00 3.51
1507 1680 2.562738 GGGTTTCCTTGTAGCTTGCAAT 59.437 45.455 0.00 0.00 0.00 3.56
1513 1686 5.125100 TCCTTGTAGCTTGCAATTGAAAG 57.875 39.130 20.35 20.35 33.72 2.62
1560 1733 2.559668 ACGTCTGGGTTTGAGATTACGA 59.440 45.455 0.00 0.00 33.59 3.43
1569 1742 3.526931 TTGAGATTACGAGGAGGCTTG 57.473 47.619 0.00 0.00 0.00 4.01
1674 1872 9.710900 TGATGCCTAATAGTAATTCATACTGTG 57.289 33.333 0.00 0.00 44.64 3.66
1734 1934 0.768266 CGTCGTTGTAGTGTCGTGTG 59.232 55.000 0.00 0.00 0.00 3.82
1781 1981 6.183361 TGGTTGTCTAGGTGTACATTGAAGAA 60.183 38.462 0.00 0.00 0.00 2.52
1782 1982 6.879458 GGTTGTCTAGGTGTACATTGAAGAAT 59.121 38.462 0.00 0.00 0.00 2.40
1783 1983 7.390718 GGTTGTCTAGGTGTACATTGAAGAATT 59.609 37.037 0.00 0.00 0.00 2.17
1854 2364 5.904362 ATTCAGTTGTCTTGAATTAGCCC 57.096 39.130 0.00 0.00 0.00 5.19
1859 2369 5.047802 CAGTTGTCTTGAATTAGCCCATTGT 60.048 40.000 0.00 0.00 0.00 2.71
1861 2371 5.643379 TGTCTTGAATTAGCCCATTGTTC 57.357 39.130 0.00 0.00 0.00 3.18
1887 2397 3.517901 ACAATGAAGGATACCCGAAGACA 59.482 43.478 0.00 0.00 37.58 3.41
1897 2407 5.359292 GGATACCCGAAGACAGTAAGTTAGT 59.641 44.000 0.00 0.00 0.00 2.24
1902 2412 5.279356 CCCGAAGACAGTAAGTTAGTTTCCT 60.279 44.000 1.07 0.00 0.00 3.36
1909 2419 5.008712 ACAGTAAGTTAGTTTCCTTGCAAGC 59.991 40.000 21.43 7.31 0.00 4.01
1948 2458 2.157668 CGCAAGACGCACTCATAAGTTT 59.842 45.455 0.00 0.00 42.60 2.66
2095 2606 7.760340 GGTACTCATACTTGACACCTCTAAAAG 59.240 40.741 0.00 0.00 32.56 2.27
2097 2608 6.014156 ACTCATACTTGACACCTCTAAAAGCT 60.014 38.462 0.00 0.00 0.00 3.74
2098 2609 7.178628 ACTCATACTTGACACCTCTAAAAGCTA 59.821 37.037 0.00 0.00 0.00 3.32
2099 2610 7.321153 TCATACTTGACACCTCTAAAAGCTAC 58.679 38.462 0.00 0.00 0.00 3.58
2100 2611 5.810080 ACTTGACACCTCTAAAAGCTACT 57.190 39.130 0.00 0.00 0.00 2.57
2101 2612 6.912951 ACTTGACACCTCTAAAAGCTACTA 57.087 37.500 0.00 0.00 0.00 1.82
2102 2613 6.689554 ACTTGACACCTCTAAAAGCTACTAC 58.310 40.000 0.00 0.00 0.00 2.73
2103 2614 6.494146 ACTTGACACCTCTAAAAGCTACTACT 59.506 38.462 0.00 0.00 0.00 2.57
2104 2615 6.512342 TGACACCTCTAAAAGCTACTACTC 57.488 41.667 0.00 0.00 0.00 2.59
2105 2616 5.418209 TGACACCTCTAAAAGCTACTACTCC 59.582 44.000 0.00 0.00 0.00 3.85
2106 2617 4.398673 ACACCTCTAAAAGCTACTACTCCG 59.601 45.833 0.00 0.00 0.00 4.63
2107 2618 4.398673 CACCTCTAAAAGCTACTACTCCGT 59.601 45.833 0.00 0.00 0.00 4.69
2108 2619 4.639755 ACCTCTAAAAGCTACTACTCCGTC 59.360 45.833 0.00 0.00 0.00 4.79
2109 2620 4.036616 CCTCTAAAAGCTACTACTCCGTCC 59.963 50.000 0.00 0.00 0.00 4.79
2110 2621 3.950395 TCTAAAAGCTACTACTCCGTCCC 59.050 47.826 0.00 0.00 0.00 4.46
2111 2622 2.226962 AAAGCTACTACTCCGTCCCA 57.773 50.000 0.00 0.00 0.00 4.37
2112 2623 2.456073 AAGCTACTACTCCGTCCCAT 57.544 50.000 0.00 0.00 0.00 4.00
2113 2624 3.589951 AAGCTACTACTCCGTCCCATA 57.410 47.619 0.00 0.00 0.00 2.74
2114 2625 3.589951 AGCTACTACTCCGTCCCATAA 57.410 47.619 0.00 0.00 0.00 1.90
2115 2626 4.115398 AGCTACTACTCCGTCCCATAAT 57.885 45.455 0.00 0.00 0.00 1.28
2116 2627 3.827302 AGCTACTACTCCGTCCCATAATG 59.173 47.826 0.00 0.00 0.00 1.90
2117 2628 3.573110 GCTACTACTCCGTCCCATAATGT 59.427 47.826 0.00 0.00 0.00 2.71
2118 2629 4.763793 GCTACTACTCCGTCCCATAATGTA 59.236 45.833 0.00 0.00 0.00 2.29
2119 2630 5.242393 GCTACTACTCCGTCCCATAATGTAA 59.758 44.000 0.00 0.00 0.00 2.41
2120 2631 5.786264 ACTACTCCGTCCCATAATGTAAG 57.214 43.478 0.00 0.00 0.00 2.34
2121 2632 5.452255 ACTACTCCGTCCCATAATGTAAGA 58.548 41.667 0.00 0.00 0.00 2.10
2122 2633 6.075984 ACTACTCCGTCCCATAATGTAAGAT 58.924 40.000 0.00 0.00 0.00 2.40
2123 2634 5.215252 ACTCCGTCCCATAATGTAAGATG 57.785 43.478 0.00 0.00 0.00 2.90
2124 2635 4.654262 ACTCCGTCCCATAATGTAAGATGT 59.346 41.667 0.00 0.00 0.00 3.06
2125 2636 5.130477 ACTCCGTCCCATAATGTAAGATGTT 59.870 40.000 0.00 0.00 0.00 2.71
2126 2637 5.996644 TCCGTCCCATAATGTAAGATGTTT 58.003 37.500 0.00 0.00 0.00 2.83
2127 2638 6.419791 TCCGTCCCATAATGTAAGATGTTTT 58.580 36.000 0.00 0.00 0.00 2.43
2128 2639 7.566569 TCCGTCCCATAATGTAAGATGTTTTA 58.433 34.615 0.00 0.00 0.00 1.52
2129 2640 7.496591 TCCGTCCCATAATGTAAGATGTTTTAC 59.503 37.037 0.00 0.00 34.78 2.01
2130 2641 7.281324 CCGTCCCATAATGTAAGATGTTTTACA 59.719 37.037 1.59 1.59 44.87 2.41
2131 2642 8.670135 CGTCCCATAATGTAAGATGTTTTACAA 58.330 33.333 3.09 0.00 44.21 2.41
2133 2644 9.747898 TCCCATAATGTAAGATGTTTTACAAGT 57.252 29.630 3.09 0.00 44.21 3.16
2174 2685 5.977489 TGTCTATACATTATGGGACGGAG 57.023 43.478 0.00 0.00 0.00 4.63
2175 2686 4.770531 TGTCTATACATTATGGGACGGAGG 59.229 45.833 0.00 0.00 0.00 4.30
2176 2687 4.159879 GTCTATACATTATGGGACGGAGGG 59.840 50.000 0.00 0.00 0.00 4.30
2177 2688 2.779429 TACATTATGGGACGGAGGGA 57.221 50.000 0.00 0.00 0.00 4.20
2178 2689 1.424638 ACATTATGGGACGGAGGGAG 58.575 55.000 0.00 0.00 0.00 4.30
2300 2811 5.749462 AGTCCATTAAGCTGCTGAATAGTT 58.251 37.500 11.86 0.00 0.00 2.24
2309 2820 4.096984 AGCTGCTGAATAGTTTGTATTGCC 59.903 41.667 0.00 0.00 0.00 4.52
2325 2836 0.603707 TGCCTGACACTGTAGCTTGC 60.604 55.000 0.00 0.00 0.00 4.01
2331 2842 3.399330 TGACACTGTAGCTTGCCTTAAC 58.601 45.455 0.00 0.00 0.00 2.01
2351 2862 8.432805 CCTTAACCTGTTCACCAGATTATCTAT 58.567 37.037 0.00 0.00 44.49 1.98
2394 2905 5.487433 TCAGGATGATTTCTTTCGTGCTAA 58.513 37.500 0.00 0.00 42.56 3.09
2405 2916 4.695455 TCTTTCGTGCTAATAGCTTGCTTT 59.305 37.500 13.88 0.00 42.97 3.51
2409 2920 5.601662 TCGTGCTAATAGCTTGCTTTAGAT 58.398 37.500 13.88 1.07 42.97 1.98
2537 3049 9.688091 TGGTATTTCAGCCTTTACAACAATATA 57.312 29.630 0.00 0.00 0.00 0.86
2612 3124 5.659849 AGATTGAGCCTAAATGGGAAGAT 57.340 39.130 0.00 0.00 36.00 2.40
2705 3217 6.377996 TGCATACTGTAAGGATCTTTTGCATT 59.622 34.615 7.92 3.58 32.70 3.56
2746 3258 5.228945 TCTTTTCTCTAACTTCCACCCTG 57.771 43.478 0.00 0.00 0.00 4.45
2828 3340 1.880027 GGTGACGAAATTTGTGGAGCT 59.120 47.619 0.00 0.00 0.00 4.09
2837 3349 2.902705 TTTGTGGAGCTGTCGTTAGT 57.097 45.000 0.00 0.00 0.00 2.24
2918 3430 9.003658 GCTGCTCAGGTATGTATTATAAAATGT 57.996 33.333 0.00 0.00 0.00 2.71
2931 3443 9.708092 GTATTATAAAATGTACTCCCTCTGTCC 57.292 37.037 0.00 0.00 0.00 4.02
2932 3444 5.632034 ATAAAATGTACTCCCTCTGTCCC 57.368 43.478 0.00 0.00 0.00 4.46
2933 3445 2.642171 AATGTACTCCCTCTGTCCCA 57.358 50.000 0.00 0.00 0.00 4.37
2934 3446 2.166907 ATGTACTCCCTCTGTCCCAG 57.833 55.000 0.00 0.00 0.00 4.45
2935 3447 1.081481 TGTACTCCCTCTGTCCCAGA 58.919 55.000 0.00 0.00 38.25 3.86
2936 3448 1.431633 TGTACTCCCTCTGTCCCAGAA 59.568 52.381 0.00 0.00 40.18 3.02
2937 3449 2.044492 TGTACTCCCTCTGTCCCAGAAT 59.956 50.000 0.00 0.00 40.18 2.40
2938 3450 3.271225 TGTACTCCCTCTGTCCCAGAATA 59.729 47.826 0.00 0.00 40.18 1.75
2939 3451 3.715648 ACTCCCTCTGTCCCAGAATAT 57.284 47.619 0.00 0.00 40.18 1.28
2940 3452 4.834406 ACTCCCTCTGTCCCAGAATATA 57.166 45.455 0.00 0.00 40.18 0.86
2941 3453 5.157770 ACTCCCTCTGTCCCAGAATATAA 57.842 43.478 0.00 0.00 40.18 0.98
2942 3454 5.151454 ACTCCCTCTGTCCCAGAATATAAG 58.849 45.833 0.00 0.00 40.18 1.73
2943 3455 5.103043 ACTCCCTCTGTCCCAGAATATAAGA 60.103 44.000 0.00 0.00 40.18 2.10
2944 3456 5.398236 TCCCTCTGTCCCAGAATATAAGAG 58.602 45.833 0.00 0.00 40.18 2.85
2945 3457 4.020662 CCCTCTGTCCCAGAATATAAGAGC 60.021 50.000 0.00 0.00 40.18 4.09
2946 3458 4.321601 CCTCTGTCCCAGAATATAAGAGCG 60.322 50.000 0.00 0.00 40.18 5.03
2947 3459 4.215908 TCTGTCCCAGAATATAAGAGCGT 58.784 43.478 0.00 0.00 37.57 5.07
2948 3460 4.649674 TCTGTCCCAGAATATAAGAGCGTT 59.350 41.667 0.00 0.00 37.57 4.84
2949 3461 5.128827 TCTGTCCCAGAATATAAGAGCGTTT 59.871 40.000 0.00 0.00 37.57 3.60
2950 3462 5.741011 TGTCCCAGAATATAAGAGCGTTTT 58.259 37.500 0.00 0.00 0.00 2.43
2951 3463 6.177610 TGTCCCAGAATATAAGAGCGTTTTT 58.822 36.000 0.00 0.00 0.00 1.94
2952 3464 6.093495 TGTCCCAGAATATAAGAGCGTTTTTG 59.907 38.462 0.00 0.00 0.00 2.44
2953 3465 6.315393 GTCCCAGAATATAAGAGCGTTTTTGA 59.685 38.462 0.00 0.00 0.00 2.69
2954 3466 6.315393 TCCCAGAATATAAGAGCGTTTTTGAC 59.685 38.462 0.00 0.00 0.00 3.18
2955 3467 6.093495 CCCAGAATATAAGAGCGTTTTTGACA 59.907 38.462 0.00 0.00 0.00 3.58
2956 3468 6.961554 CCAGAATATAAGAGCGTTTTTGACAC 59.038 38.462 0.00 0.00 0.00 3.67
2957 3469 7.148407 CCAGAATATAAGAGCGTTTTTGACACT 60.148 37.037 0.00 0.00 0.00 3.55
2958 3470 8.869897 CAGAATATAAGAGCGTTTTTGACACTA 58.130 33.333 0.00 0.00 0.00 2.74
2959 3471 9.601217 AGAATATAAGAGCGTTTTTGACACTAT 57.399 29.630 0.00 0.00 0.00 2.12
2960 3472 9.638300 GAATATAAGAGCGTTTTTGACACTATG 57.362 33.333 0.00 0.00 0.00 2.23
2961 3473 3.813529 AGAGCGTTTTTGACACTATGC 57.186 42.857 0.00 0.00 0.00 3.14
2962 3474 3.403038 AGAGCGTTTTTGACACTATGCT 58.597 40.909 0.00 0.00 0.00 3.79
2963 3475 4.566004 AGAGCGTTTTTGACACTATGCTA 58.434 39.130 0.00 0.00 0.00 3.49
2964 3476 4.627467 AGAGCGTTTTTGACACTATGCTAG 59.373 41.667 0.00 0.00 0.00 3.42
2965 3477 4.315803 AGCGTTTTTGACACTATGCTAGT 58.684 39.130 0.00 0.00 40.28 2.57
2979 3491 7.958053 ACTATGCTAGTGTTAAAAACGTTCT 57.042 32.000 0.00 0.00 37.69 3.01
2980 3492 8.374327 ACTATGCTAGTGTTAAAAACGTTCTT 57.626 30.769 0.00 0.00 37.69 2.52
2981 3493 9.480053 ACTATGCTAGTGTTAAAAACGTTCTTA 57.520 29.630 0.00 0.00 37.69 2.10
2993 3505 9.609950 TTAAAAACGTTCTTATATTTTGGGACG 57.390 29.630 0.00 0.00 0.00 4.79
2994 3506 5.806366 AACGTTCTTATATTTTGGGACGG 57.194 39.130 0.00 0.00 0.00 4.79
2995 3507 5.088680 ACGTTCTTATATTTTGGGACGGA 57.911 39.130 0.00 0.00 0.00 4.69
2996 3508 5.114081 ACGTTCTTATATTTTGGGACGGAG 58.886 41.667 0.00 0.00 0.00 4.63
2997 3509 4.510340 CGTTCTTATATTTTGGGACGGAGG 59.490 45.833 0.00 0.00 0.00 4.30
2998 3510 4.699925 TCTTATATTTTGGGACGGAGGG 57.300 45.455 0.00 0.00 0.00 4.30
2999 3511 4.300345 TCTTATATTTTGGGACGGAGGGA 58.700 43.478 0.00 0.00 0.00 4.20
3000 3512 4.347000 TCTTATATTTTGGGACGGAGGGAG 59.653 45.833 0.00 0.00 0.00 4.30
3001 3513 1.961133 TATTTTGGGACGGAGGGAGT 58.039 50.000 0.00 0.00 0.00 3.85
3002 3514 1.961133 ATTTTGGGACGGAGGGAGTA 58.039 50.000 0.00 0.00 0.00 2.59
3003 3515 1.961133 TTTTGGGACGGAGGGAGTAT 58.039 50.000 0.00 0.00 0.00 2.12
3004 3516 2.852714 TTTGGGACGGAGGGAGTATA 57.147 50.000 0.00 0.00 0.00 1.47
3005 3517 2.852714 TTGGGACGGAGGGAGTATAA 57.147 50.000 0.00 0.00 0.00 0.98
3051 3578 4.497473 GCAACAGCCATGTAGTTTACAA 57.503 40.909 0.00 0.00 42.76 2.41
3052 3579 4.226761 GCAACAGCCATGTAGTTTACAAC 58.773 43.478 0.00 0.00 42.76 3.32
3053 3580 4.261405 GCAACAGCCATGTAGTTTACAACA 60.261 41.667 0.00 0.00 42.76 3.33
3056 3583 4.391830 ACAGCCATGTAGTTTACAACATCG 59.608 41.667 0.00 0.00 42.76 3.84
3057 3584 4.391830 CAGCCATGTAGTTTACAACATCGT 59.608 41.667 0.00 0.00 42.76 3.73
3061 3588 6.237755 GCCATGTAGTTTACAACATCGTAGAC 60.238 42.308 0.00 0.00 40.67 2.59
3090 3617 7.823665 AGCATGCATAATAATATTGTGACCTG 58.176 34.615 21.98 8.60 0.00 4.00
3103 3630 8.766994 ATATTGTGACCTGCATATAAAAAGGT 57.233 30.769 3.86 3.86 45.75 3.50
3164 3692 7.282901 TGCTAAATGTCAGTATGTATGCAATGT 59.717 33.333 0.00 0.00 37.40 2.71
3233 3763 6.765989 GGATGTATGCAGTATACCTTGAACAA 59.234 38.462 6.23 0.00 40.80 2.83
3381 3911 6.417339 GTGCTACGTAACTCCTAAGCTATTTC 59.583 42.308 0.00 0.00 0.00 2.17
3415 3945 4.641954 CAACATACGCTCATTTGTCTGTC 58.358 43.478 0.00 0.00 0.00 3.51
3447 3977 6.708949 TCCGGCTATATTTTTATGTCAACTCC 59.291 38.462 0.00 0.00 0.00 3.85
3489 4276 5.586643 TGTGTTAGCATTTGTTGACAGTGTA 59.413 36.000 0.00 0.00 0.00 2.90
3522 4309 9.618890 AGCATCATAAAGTGTGATACATTTAGT 57.381 29.630 0.00 0.00 34.68 2.24
3568 4618 5.221402 TGGCAAGACATGTTTATTTGAAGCA 60.221 36.000 0.00 0.00 0.00 3.91
3588 4638 8.970020 TGAAGCACCATTGATAAATGTTCTTAT 58.030 29.630 2.00 0.00 0.00 1.73
3596 4646 7.896383 TTGATAAATGTTCTTATTCCCCCAG 57.104 36.000 0.00 0.00 0.00 4.45
3711 4761 7.707467 ACCTGGGTAAATTCTATCACCTATT 57.293 36.000 0.00 0.00 0.00 1.73
3767 4822 1.470805 GGTTTTGTTTTCTGTGCCGCT 60.471 47.619 0.00 0.00 0.00 5.52
3847 4902 5.874810 TCAGCGTTTATTAGTTTCTGAGCAT 59.125 36.000 0.00 0.00 0.00 3.79
3851 4906 8.893727 AGCGTTTATTAGTTTCTGAGCATATTT 58.106 29.630 0.00 0.00 0.00 1.40
3952 5007 0.870393 ATGTGAGTCGCTTGCACTTG 59.130 50.000 5.11 0.00 33.83 3.16
4081 5136 1.792006 GTTTGATCCCGTGACTCGTT 58.208 50.000 0.00 0.00 37.94 3.85
4142 5197 4.775163 ACGCAAGAAGGTTTCTCCTGGG 62.775 54.545 0.00 6.21 43.99 4.45
4171 5226 2.363711 CTTGTAGCGGGCGGATGCTA 62.364 60.000 0.00 0.00 42.48 3.49
4177 5232 1.949257 CGGGCGGATGCTATTTTCC 59.051 57.895 0.00 0.00 42.25 3.13
4230 5293 7.327975 TGGAAGACATAATCTAACATCGTTGT 58.672 34.615 0.00 0.00 36.27 3.32
4256 5319 3.752747 TGTCGTCGTTGTACTCCATAAGA 59.247 43.478 0.00 0.00 0.00 2.10
4295 5362 8.948631 ATGAAGAGTTATTTTATGAGAAGCGA 57.051 30.769 0.00 0.00 0.00 4.93
4296 5363 8.948631 TGAAGAGTTATTTTATGAGAAGCGAT 57.051 30.769 0.00 0.00 0.00 4.58
4310 5377 3.681897 AGAAGCGATAACTGTTTGAGCTG 59.318 43.478 13.97 0.00 33.43 4.24
4311 5378 1.734465 AGCGATAACTGTTTGAGCTGC 59.266 47.619 12.96 0.00 31.76 5.25
4312 5379 1.202076 GCGATAACTGTTTGAGCTGCC 60.202 52.381 0.00 0.00 0.00 4.85
4345 5412 3.438087 CACTACTGCTTTGTCCATCTTGG 59.562 47.826 0.00 0.00 39.43 3.61
4398 5465 5.807011 GCTCAATTATGTGTCATTCCAAACC 59.193 40.000 0.00 0.00 0.00 3.27
4400 5467 7.148086 GCTCAATTATGTGTCATTCCAAACCTA 60.148 37.037 0.00 0.00 0.00 3.08
4416 5483 5.590259 CCAAACCTAGATGTTATGGTTGGAG 59.410 44.000 4.25 0.00 41.36 3.86
4425 5492 5.818678 TGTTATGGTTGGAGTTACAGAGT 57.181 39.130 0.00 0.00 0.00 3.24
4430 5503 6.620877 ATGGTTGGAGTTACAGAGTTCATA 57.379 37.500 0.00 0.00 0.00 2.15
4432 5505 5.542635 TGGTTGGAGTTACAGAGTTCATACT 59.457 40.000 0.00 0.00 37.31 2.12
4443 5516 1.749634 AGTTCATACTCCCTCCGTTCG 59.250 52.381 0.00 0.00 0.00 3.95
4457 5530 2.827322 TCCGTTCGAAAATACTCCCTCA 59.173 45.455 0.00 0.00 0.00 3.86
4458 5531 3.258872 TCCGTTCGAAAATACTCCCTCAA 59.741 43.478 0.00 0.00 0.00 3.02
4472 5545 2.364324 TCCCTCAATCCGGAATTACTCG 59.636 50.000 9.01 0.00 0.00 4.18
4486 5559 5.066117 GGAATTACTCGTTGGAGAAATTCCC 59.934 44.000 11.75 0.00 46.19 3.97
4489 5562 2.027100 ACTCGTTGGAGAAATTCCCTCC 60.027 50.000 16.06 16.06 46.19 4.30
4518 5591 5.005490 GGAATTACTCGTCGGAGAAATGAAC 59.995 44.000 0.00 0.00 43.27 3.18
4527 5600 5.213675 GTCGGAGAAATGAACGTATCTAGG 58.786 45.833 0.00 0.00 39.69 3.02
4528 5601 3.982058 CGGAGAAATGAACGTATCTAGGC 59.018 47.826 0.00 0.00 0.00 3.93
4534 5607 9.209175 GAGAAATGAACGTATCTAGGCATATTT 57.791 33.333 0.00 0.00 0.00 1.40
4540 5613 9.472361 TGAACGTATCTAGGCATATTTTAGTTC 57.528 33.333 0.00 8.32 34.24 3.01
4584 5657 9.743057 ATTCATTTTTGTGACGAGTAATTTTGA 57.257 25.926 0.00 0.00 0.00 2.69
4585 5658 9.574458 TTCATTTTTGTGACGAGTAATTTTGAA 57.426 25.926 0.00 0.00 0.00 2.69
4586 5659 9.015577 TCATTTTTGTGACGAGTAATTTTGAAC 57.984 29.630 0.00 0.00 0.00 3.18
4587 5660 8.802856 CATTTTTGTGACGAGTAATTTTGAACA 58.197 29.630 0.00 0.00 0.00 3.18
4596 5669 9.362539 GACGAGTAATTTTGAACAGAGGTATAA 57.637 33.333 0.00 0.00 0.00 0.98
4605 5678 9.787435 TTTTGAACAGAGGTATAATGTGTAACT 57.213 29.630 0.00 0.00 38.04 2.24
4663 5736 8.995220 TCAACATCTACAGTACCAAATTTGTAC 58.005 33.333 16.73 16.65 0.00 2.90
4666 5739 8.107095 ACATCTACAGTACCAAATTTGTACCAT 58.893 33.333 16.73 11.42 0.00 3.55
4737 5810 8.691661 ATTTTATTCTATAGAACAATGCCCGT 57.308 30.769 17.35 1.35 36.80 5.28
4738 5811 7.490962 TTTATTCTATAGAACAATGCCCGTG 57.509 36.000 17.35 0.00 36.80 4.94
4739 5812 2.833794 TCTATAGAACAATGCCCGTGC 58.166 47.619 0.00 0.00 38.26 5.34
4740 5813 1.526887 CTATAGAACAATGCCCGTGCG 59.473 52.381 0.00 0.00 41.78 5.34
4741 5814 0.392461 ATAGAACAATGCCCGTGCGT 60.392 50.000 0.00 0.00 41.78 5.24
4742 5815 9.980084 TATTCTATAGAACAATGCCCGTGCGTT 62.980 40.741 17.35 0.00 40.41 4.84
4746 5819 2.596046 AATGCCCGTGCGTTGGAA 60.596 55.556 0.00 0.00 44.90 3.53
4747 5820 2.914908 AATGCCCGTGCGTTGGAAC 61.915 57.895 0.00 0.00 44.90 3.62
4766 5839 9.939802 GTTGGAACGGGATATAAATATTCTAGT 57.060 33.333 0.00 0.00 0.00 2.57
4769 5842 9.727627 GGAACGGGATATAAATATTCTAGTACG 57.272 37.037 0.00 0.00 0.00 3.67
4785 5858 8.906636 TTCTAGTACGTTAGCTTGTGATTTAG 57.093 34.615 0.00 0.00 0.00 1.85
4786 5859 6.971184 TCTAGTACGTTAGCTTGTGATTTAGC 59.029 38.462 0.00 0.00 37.66 3.09
4788 5861 4.928661 ACGTTAGCTTGTGATTTAGCTG 57.071 40.909 6.85 0.00 46.62 4.24
4789 5862 4.315803 ACGTTAGCTTGTGATTTAGCTGT 58.684 39.130 6.85 0.00 46.62 4.40
4790 5863 4.389077 ACGTTAGCTTGTGATTTAGCTGTC 59.611 41.667 6.85 0.00 46.62 3.51
4791 5864 4.388773 CGTTAGCTTGTGATTTAGCTGTCA 59.611 41.667 6.85 0.00 46.62 3.58
4792 5865 5.107104 CGTTAGCTTGTGATTTAGCTGTCAA 60.107 40.000 6.85 0.00 46.62 3.18
4793 5866 6.402550 CGTTAGCTTGTGATTTAGCTGTCAAT 60.403 38.462 6.85 0.00 46.62 2.57
4794 5867 7.201522 CGTTAGCTTGTGATTTAGCTGTCAATA 60.202 37.037 6.85 0.00 46.62 1.90
4795 5868 8.450964 GTTAGCTTGTGATTTAGCTGTCAATAA 58.549 33.333 6.85 0.00 46.62 1.40
4796 5869 7.636150 AGCTTGTGATTTAGCTGTCAATAAT 57.364 32.000 0.00 0.00 45.55 1.28
4797 5870 8.737168 AGCTTGTGATTTAGCTGTCAATAATA 57.263 30.769 0.00 0.00 45.55 0.98
4798 5871 9.177608 AGCTTGTGATTTAGCTGTCAATAATAA 57.822 29.630 0.00 0.00 45.55 1.40
4799 5872 9.956720 GCTTGTGATTTAGCTGTCAATAATAAT 57.043 29.630 0.00 0.00 34.57 1.28
4809 5882 8.284945 AGCTGTCAATAATAATGTGATTGTGT 57.715 30.769 0.00 0.00 33.27 3.72
4810 5883 9.394767 AGCTGTCAATAATAATGTGATTGTGTA 57.605 29.630 0.00 0.00 33.27 2.90
4836 5909 8.915871 AATAAATGTTCATCAAATTCTGACCG 57.084 30.769 0.00 0.00 36.69 4.79
4837 5910 4.970662 ATGTTCATCAAATTCTGACCGG 57.029 40.909 0.00 0.00 36.69 5.28
4838 5911 3.081061 TGTTCATCAAATTCTGACCGGG 58.919 45.455 6.32 0.00 36.69 5.73
4839 5912 1.750193 TCATCAAATTCTGACCGGGC 58.250 50.000 6.32 1.57 36.69 6.13
4840 5913 0.378257 CATCAAATTCTGACCGGGCG 59.622 55.000 6.32 0.00 36.69 6.13
4841 5914 0.748005 ATCAAATTCTGACCGGGCGG 60.748 55.000 11.02 11.02 36.69 6.13
4842 5915 1.376683 CAAATTCTGACCGGGCGGA 60.377 57.895 17.23 17.23 38.96 5.54
4843 5916 1.376812 AAATTCTGACCGGGCGGAC 60.377 57.895 21.65 0.00 38.96 4.79
4844 5917 3.659089 AATTCTGACCGGGCGGACG 62.659 63.158 21.65 0.00 38.96 4.79
4865 5938 3.837669 CGACCCAAACGGACAAAAG 57.162 52.632 0.00 0.00 34.64 2.27
4866 5939 0.309612 CGACCCAAACGGACAAAAGG 59.690 55.000 0.00 0.00 34.64 3.11
4867 5940 0.031585 GACCCAAACGGACAAAAGGC 59.968 55.000 0.00 0.00 34.64 4.35
4868 5941 1.007849 CCCAAACGGACAAAAGGCG 60.008 57.895 0.00 0.00 0.00 5.52
4869 5942 1.007849 CCAAACGGACAAAAGGCGG 60.008 57.895 0.00 0.00 0.00 6.13
4870 5943 1.448922 CCAAACGGACAAAAGGCGGA 61.449 55.000 0.00 0.00 0.00 5.54
4871 5944 0.317519 CAAACGGACAAAAGGCGGAC 60.318 55.000 0.00 0.00 0.00 4.79
4872 5945 1.778027 AAACGGACAAAAGGCGGACG 61.778 55.000 0.00 0.00 0.00 4.79
4873 5946 2.356553 CGGACAAAAGGCGGACGA 60.357 61.111 0.00 0.00 0.00 4.20
4874 5947 1.957186 CGGACAAAAGGCGGACGAA 60.957 57.895 0.00 0.00 0.00 3.85
4875 5948 1.500512 CGGACAAAAGGCGGACGAAA 61.501 55.000 0.00 0.00 0.00 3.46
4876 5949 0.879090 GGACAAAAGGCGGACGAAAT 59.121 50.000 0.00 0.00 0.00 2.17
4877 5950 1.135774 GGACAAAAGGCGGACGAAATC 60.136 52.381 0.00 0.00 0.00 2.17
4878 5951 0.515564 ACAAAAGGCGGACGAAATCG 59.484 50.000 0.48 0.48 46.33 3.34
4887 5960 2.048877 ACGAAATCGCCGTCCGTT 60.049 55.556 2.15 0.00 44.43 4.44
4888 5961 1.665599 ACGAAATCGCCGTCCGTTT 60.666 52.632 2.15 0.00 44.43 3.60
4889 5962 1.225637 CGAAATCGCCGTCCGTTTG 60.226 57.895 0.00 0.00 38.35 2.93
4890 5963 1.133869 GAAATCGCCGTCCGTTTGG 59.866 57.895 0.00 0.00 38.35 3.28
4891 5964 2.248274 GAAATCGCCGTCCGTTTGGG 62.248 60.000 0.00 0.00 38.35 4.12
4892 5965 3.540367 AATCGCCGTCCGTTTGGGT 62.540 57.895 0.00 0.00 38.35 4.51
4893 5966 3.945304 ATCGCCGTCCGTTTGGGTC 62.945 63.158 0.00 0.00 38.35 4.46
4907 5980 4.324991 GGTCGGCCCGTTGGAGTT 62.325 66.667 1.63 0.00 0.00 3.01
4908 5981 3.047877 GTCGGCCCGTTGGAGTTG 61.048 66.667 1.63 0.00 0.00 3.16
4911 5984 3.056328 GGCCCGTTGGAGTTGCTC 61.056 66.667 0.00 0.00 0.00 4.26
4912 5985 2.032681 GCCCGTTGGAGTTGCTCT 59.967 61.111 0.00 0.00 0.00 4.09
4913 5986 1.600916 GCCCGTTGGAGTTGCTCTT 60.601 57.895 0.00 0.00 0.00 2.85
4914 5987 0.321298 GCCCGTTGGAGTTGCTCTTA 60.321 55.000 0.00 0.00 0.00 2.10
4915 5988 1.679032 GCCCGTTGGAGTTGCTCTTAT 60.679 52.381 0.00 0.00 0.00 1.73
4916 5989 2.419574 GCCCGTTGGAGTTGCTCTTATA 60.420 50.000 0.00 0.00 0.00 0.98
4917 5990 3.195661 CCCGTTGGAGTTGCTCTTATAC 58.804 50.000 0.00 0.00 0.00 1.47
4918 5991 3.118738 CCCGTTGGAGTTGCTCTTATACT 60.119 47.826 0.00 0.00 0.00 2.12
4919 5992 4.504858 CCGTTGGAGTTGCTCTTATACTT 58.495 43.478 0.00 0.00 0.00 2.24
4920 5993 4.935808 CCGTTGGAGTTGCTCTTATACTTT 59.064 41.667 0.00 0.00 0.00 2.66
4921 5994 5.163854 CCGTTGGAGTTGCTCTTATACTTTG 60.164 44.000 0.00 0.00 0.00 2.77
4922 5995 5.637810 CGTTGGAGTTGCTCTTATACTTTGA 59.362 40.000 0.00 0.00 0.00 2.69
4923 5996 6.313905 CGTTGGAGTTGCTCTTATACTTTGAT 59.686 38.462 0.00 0.00 0.00 2.57
4924 5997 7.148407 CGTTGGAGTTGCTCTTATACTTTGATT 60.148 37.037 0.00 0.00 0.00 2.57
4925 5998 9.162764 GTTGGAGTTGCTCTTATACTTTGATTA 57.837 33.333 0.00 0.00 0.00 1.75
4926 5999 8.948631 TGGAGTTGCTCTTATACTTTGATTAG 57.051 34.615 0.00 0.00 0.00 1.73
4927 6000 8.758829 TGGAGTTGCTCTTATACTTTGATTAGA 58.241 33.333 0.00 0.00 0.00 2.10
4928 6001 9.601217 GGAGTTGCTCTTATACTTTGATTAGAA 57.399 33.333 0.00 0.00 0.00 2.10
4971 6044 9.588096 AAAGTGGAATTCATTTAGAAGGTAAGT 57.412 29.630 7.93 0.00 40.15 2.24
4987 6060 9.959721 AGAAGGTAAGTAAATTAAGCTGATTGA 57.040 29.630 0.00 0.00 0.00 2.57
5014 6087 5.814481 TCATGTACATGAAAGGTTGGATGA 58.186 37.500 31.48 9.22 44.14 2.92
5015 6088 6.244654 TCATGTACATGAAAGGTTGGATGAA 58.755 36.000 31.48 7.89 44.14 2.57
5016 6089 6.375174 TCATGTACATGAAAGGTTGGATGAAG 59.625 38.462 31.48 4.06 44.14 3.02
5017 6090 5.009631 TGTACATGAAAGGTTGGATGAAGG 58.990 41.667 0.00 0.00 28.09 3.46
5018 6091 4.387026 ACATGAAAGGTTGGATGAAGGA 57.613 40.909 0.00 0.00 0.00 3.36
5019 6092 4.338879 ACATGAAAGGTTGGATGAAGGAG 58.661 43.478 0.00 0.00 0.00 3.69
5020 6093 4.202609 ACATGAAAGGTTGGATGAAGGAGT 60.203 41.667 0.00 0.00 0.00 3.85
5021 6094 3.754965 TGAAAGGTTGGATGAAGGAGTG 58.245 45.455 0.00 0.00 0.00 3.51
5022 6095 2.887151 AAGGTTGGATGAAGGAGTGG 57.113 50.000 0.00 0.00 0.00 4.00
5023 6096 1.747444 AGGTTGGATGAAGGAGTGGT 58.253 50.000 0.00 0.00 0.00 4.16
5024 6097 1.352352 AGGTTGGATGAAGGAGTGGTG 59.648 52.381 0.00 0.00 0.00 4.17
5025 6098 1.351017 GGTTGGATGAAGGAGTGGTGA 59.649 52.381 0.00 0.00 0.00 4.02
5026 6099 2.616510 GGTTGGATGAAGGAGTGGTGAG 60.617 54.545 0.00 0.00 0.00 3.51
5027 6100 2.303022 GTTGGATGAAGGAGTGGTGAGA 59.697 50.000 0.00 0.00 0.00 3.27
5028 6101 2.619931 TGGATGAAGGAGTGGTGAGAA 58.380 47.619 0.00 0.00 0.00 2.87
5029 6102 2.568956 TGGATGAAGGAGTGGTGAGAAG 59.431 50.000 0.00 0.00 0.00 2.85
5030 6103 2.834549 GGATGAAGGAGTGGTGAGAAGA 59.165 50.000 0.00 0.00 0.00 2.87
5031 6104 3.261897 GGATGAAGGAGTGGTGAGAAGAA 59.738 47.826 0.00 0.00 0.00 2.52
5032 6105 4.263068 GGATGAAGGAGTGGTGAGAAGAAA 60.263 45.833 0.00 0.00 0.00 2.52
5033 6106 4.771114 TGAAGGAGTGGTGAGAAGAAAA 57.229 40.909 0.00 0.00 0.00 2.29
5034 6107 4.708177 TGAAGGAGTGGTGAGAAGAAAAG 58.292 43.478 0.00 0.00 0.00 2.27
5035 6108 4.164221 TGAAGGAGTGGTGAGAAGAAAAGT 59.836 41.667 0.00 0.00 0.00 2.66
5036 6109 4.078639 AGGAGTGGTGAGAAGAAAAGTG 57.921 45.455 0.00 0.00 0.00 3.16
5037 6110 3.711704 AGGAGTGGTGAGAAGAAAAGTGA 59.288 43.478 0.00 0.00 0.00 3.41
5038 6111 4.164221 AGGAGTGGTGAGAAGAAAAGTGAA 59.836 41.667 0.00 0.00 0.00 3.18
5039 6112 4.881850 GGAGTGGTGAGAAGAAAAGTGAAA 59.118 41.667 0.00 0.00 0.00 2.69
5040 6113 5.532779 GGAGTGGTGAGAAGAAAAGTGAAAT 59.467 40.000 0.00 0.00 0.00 2.17
5041 6114 6.382869 AGTGGTGAGAAGAAAAGTGAAATG 57.617 37.500 0.00 0.00 0.00 2.32
5042 6115 5.888161 AGTGGTGAGAAGAAAAGTGAAATGT 59.112 36.000 0.00 0.00 0.00 2.71
5043 6116 5.973565 GTGGTGAGAAGAAAAGTGAAATGTG 59.026 40.000 0.00 0.00 0.00 3.21
5044 6117 5.885352 TGGTGAGAAGAAAAGTGAAATGTGA 59.115 36.000 0.00 0.00 0.00 3.58
5045 6118 6.376864 TGGTGAGAAGAAAAGTGAAATGTGAA 59.623 34.615 0.00 0.00 0.00 3.18
5046 6119 6.693113 GGTGAGAAGAAAAGTGAAATGTGAAC 59.307 38.462 0.00 0.00 0.00 3.18
5047 6120 7.415653 GGTGAGAAGAAAAGTGAAATGTGAACT 60.416 37.037 0.00 0.00 0.00 3.01
5048 6121 7.970614 GTGAGAAGAAAAGTGAAATGTGAACTT 59.029 33.333 0.00 0.00 35.70 2.66
5049 6122 9.173021 TGAGAAGAAAAGTGAAATGTGAACTTA 57.827 29.630 0.00 0.00 33.09 2.24
5050 6123 9.439537 GAGAAGAAAAGTGAAATGTGAACTTAC 57.560 33.333 0.00 0.00 33.09 2.34
5051 6124 8.122952 AGAAGAAAAGTGAAATGTGAACTTACG 58.877 33.333 0.00 0.00 33.09 3.18
5052 6125 7.316544 AGAAAAGTGAAATGTGAACTTACGT 57.683 32.000 0.00 0.00 33.09 3.57
5053 6126 7.758495 AGAAAAGTGAAATGTGAACTTACGTT 58.242 30.769 0.00 0.00 33.09 3.99
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 6.315393 TCGTTAGGTTTGAGATTGGCTTAATC 59.685 38.462 6.24 6.24 44.52 1.75
30 31 6.177610 TCGTTAGGTTTGAGATTGGCTTAAT 58.822 36.000 0.00 0.00 0.00 1.40
195 210 1.448119 CTCGAGCGGCTGTATCCTCA 61.448 60.000 7.50 0.00 0.00 3.86
406 447 1.745489 GCGCTTCTGGTTTCCGGAT 60.745 57.895 4.15 0.00 38.86 4.18
427 471 0.318784 GGACGTACGGCATCATCCTC 60.319 60.000 24.89 5.80 0.00 3.71
517 561 4.681978 GACCGTGTCCGCCTTGCT 62.682 66.667 0.00 0.00 0.00 3.91
520 610 4.353437 GTCGACCGTGTCCGCCTT 62.353 66.667 3.51 0.00 0.00 4.35
550 640 1.003839 CAGCCTGGTCTACGCCAAA 60.004 57.895 0.00 0.00 38.18 3.28
614 707 4.899239 CATCGAGGGCTGGACCGC 62.899 72.222 0.00 0.32 40.62 5.68
621 714 4.853050 GCAGCAGCATCGAGGGCT 62.853 66.667 8.44 8.44 43.77 5.19
660 753 4.379243 AGGAGCCGACGCACAAGG 62.379 66.667 0.00 0.00 37.52 3.61
739 839 6.722301 TCTTATATACAGTTTGTCTCGTCGG 58.278 40.000 0.00 0.00 0.00 4.79
754 854 5.981915 GGTTTGTCACCGACCTCTTATATAC 59.018 44.000 0.00 0.00 35.12 1.47
861 1002 5.221884 GCCCAGATGGAGACTAGTAGTAGTA 60.222 48.000 10.28 0.00 37.17 1.82
862 1003 4.446600 GCCCAGATGGAGACTAGTAGTAGT 60.447 50.000 10.09 10.09 38.80 2.73
1342 1504 4.368315 GACAGGAACAAAATTTCACCCAC 58.632 43.478 0.00 0.00 0.00 4.61
1359 1521 2.386661 AAACCTAGCACATCGACAGG 57.613 50.000 0.00 0.00 0.00 4.00
1362 1524 3.119245 TCCACTAAACCTAGCACATCGAC 60.119 47.826 0.00 0.00 0.00 4.20
1413 1579 3.855858 ACAAACTGACCAACGCAAAAAT 58.144 36.364 0.00 0.00 0.00 1.82
1414 1580 3.246619 GACAAACTGACCAACGCAAAAA 58.753 40.909 0.00 0.00 0.00 1.94
1435 1601 0.319900 CCCCTCATAGATGAACCGCG 60.320 60.000 0.00 0.00 36.18 6.46
1441 1607 2.052779 CGCTGCCCCTCATAGATGA 58.947 57.895 0.00 0.00 35.16 2.92
1466 1632 2.156098 CTGGCCGCTTTTAACCACTAA 58.844 47.619 0.00 0.00 0.00 2.24
1469 1639 1.584495 CCTGGCCGCTTTTAACCAC 59.416 57.895 0.00 0.00 0.00 4.16
1480 1650 0.676782 CTACAAGGAAACCCTGGCCG 60.677 60.000 0.00 0.00 33.44 6.13
1507 1680 3.102276 CAAAACGCTACAACGCTTTCAA 58.898 40.909 0.00 0.00 36.19 2.69
1513 1686 0.720173 CGGACAAAACGCTACAACGC 60.720 55.000 0.00 0.00 36.19 4.84
1517 1690 1.500512 GCACCGGACAAAACGCTACA 61.501 55.000 9.46 0.00 0.00 2.74
1560 1733 2.092914 GGTGCTGTTATACAAGCCTCCT 60.093 50.000 3.91 0.00 0.00 3.69
1569 1742 6.513393 GCCTATGAAACATGGTGCTGTTATAC 60.513 42.308 0.00 0.00 38.38 1.47
1691 1890 6.498304 GTGTCCATCAAATAATCATGGTGAC 58.502 40.000 0.00 0.00 38.62 3.67
1693 1892 5.066375 ACGTGTCCATCAAATAATCATGGTG 59.934 40.000 0.00 0.00 38.62 4.17
1750 1950 4.406326 TGTACACCTAGACAACCAGAACAA 59.594 41.667 0.00 0.00 0.00 2.83
1751 1951 3.962063 TGTACACCTAGACAACCAGAACA 59.038 43.478 0.00 0.00 0.00 3.18
1859 2369 4.717778 TCGGGTATCCTTCATTGTTAGGAA 59.282 41.667 12.18 0.00 43.44 3.36
1861 2371 4.682778 TCGGGTATCCTTCATTGTTAGG 57.317 45.455 0.00 0.00 0.00 2.69
1878 2388 4.928020 GGAAACTAACTTACTGTCTTCGGG 59.072 45.833 0.00 0.00 0.00 5.14
1887 2397 4.519350 GGCTTGCAAGGAAACTAACTTACT 59.481 41.667 27.10 0.00 42.68 2.24
1897 2407 3.167485 AGATGAATGGCTTGCAAGGAAA 58.833 40.909 27.10 1.72 0.00 3.13
1902 2412 5.243507 TCAACTTAAGATGAATGGCTTGCAA 59.756 36.000 12.58 0.00 0.00 4.08
1909 2419 4.944962 TGCGTCAACTTAAGATGAATGG 57.055 40.909 16.13 10.17 0.00 3.16
2102 2613 5.215252 ACATCTTACATTATGGGACGGAG 57.785 43.478 0.00 0.00 0.00 4.63
2103 2614 5.623956 AACATCTTACATTATGGGACGGA 57.376 39.130 0.00 0.00 0.00 4.69
2104 2615 6.693315 AAAACATCTTACATTATGGGACGG 57.307 37.500 0.00 0.00 0.00 4.79
2105 2616 8.203937 TGTAAAACATCTTACATTATGGGACG 57.796 34.615 0.00 0.00 36.97 4.79
2107 2618 9.747898 ACTTGTAAAACATCTTACATTATGGGA 57.252 29.630 0.00 0.00 40.53 4.37
2152 2663 4.770531 CCTCCGTCCCATAATGTATAGACA 59.229 45.833 0.00 0.00 40.72 3.41
2153 2664 4.159879 CCCTCCGTCCCATAATGTATAGAC 59.840 50.000 0.00 0.00 0.00 2.59
2154 2665 4.044952 TCCCTCCGTCCCATAATGTATAGA 59.955 45.833 0.00 0.00 0.00 1.98
2155 2666 4.350245 TCCCTCCGTCCCATAATGTATAG 58.650 47.826 0.00 0.00 0.00 1.31
2156 2667 4.202749 ACTCCCTCCGTCCCATAATGTATA 60.203 45.833 0.00 0.00 0.00 1.47
2157 2668 3.173965 CTCCCTCCGTCCCATAATGTAT 58.826 50.000 0.00 0.00 0.00 2.29
2158 2669 2.090943 ACTCCCTCCGTCCCATAATGTA 60.091 50.000 0.00 0.00 0.00 2.29
2159 2670 1.344087 ACTCCCTCCGTCCCATAATGT 60.344 52.381 0.00 0.00 0.00 2.71
2160 2671 1.424638 ACTCCCTCCGTCCCATAATG 58.575 55.000 0.00 0.00 0.00 1.90
2161 2672 2.179424 ACTACTCCCTCCGTCCCATAAT 59.821 50.000 0.00 0.00 0.00 1.28
2162 2673 1.572415 ACTACTCCCTCCGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
2163 2674 1.229131 ACTACTCCCTCCGTCCCATA 58.771 55.000 0.00 0.00 0.00 2.74
2164 2675 0.338814 AACTACTCCCTCCGTCCCAT 59.661 55.000 0.00 0.00 0.00 4.00
2165 2676 0.115745 AAACTACTCCCTCCGTCCCA 59.884 55.000 0.00 0.00 0.00 4.37
2166 2677 2.149973 TAAACTACTCCCTCCGTCCC 57.850 55.000 0.00 0.00 0.00 4.46
2167 2678 7.232330 AGTTAATATAAACTACTCCCTCCGTCC 59.768 40.741 0.00 0.00 37.93 4.79
2168 2679 8.175925 AGTTAATATAAACTACTCCCTCCGTC 57.824 38.462 0.00 0.00 37.93 4.79
2169 2680 9.646522 TTAGTTAATATAAACTACTCCCTCCGT 57.353 33.333 0.00 0.00 40.70 4.69
2300 2811 3.007940 AGCTACAGTGTCAGGCAATACAA 59.992 43.478 0.00 0.00 0.00 2.41
2309 2820 2.175878 AAGGCAAGCTACAGTGTCAG 57.824 50.000 0.00 0.00 0.00 3.51
2369 2880 4.761739 AGCACGAAAGAAATCATCCTGAAA 59.238 37.500 0.00 0.00 0.00 2.69
2441 2952 6.930667 AAGCTCAAAACAAATGAAAATGCT 57.069 29.167 0.00 0.00 0.00 3.79
2537 3049 5.415701 CACATTCAACTTGCTAGGGTTATGT 59.584 40.000 0.00 1.96 0.00 2.29
2705 3217 9.598517 AGAAAAGATAATTCTGCAACAAAAACA 57.401 25.926 0.00 0.00 35.85 2.83
2732 3244 2.846827 AGGGAATCAGGGTGGAAGTTAG 59.153 50.000 0.00 0.00 0.00 2.34
2828 3340 0.664224 TCTGACGCACACTAACGACA 59.336 50.000 0.00 0.00 33.31 4.35
2837 3349 1.939934 CTTTCCTGTTTCTGACGCACA 59.060 47.619 0.00 0.00 0.00 4.57
2927 3439 5.353394 AAACGCTCTTATATTCTGGGACA 57.647 39.130 0.00 0.00 0.00 4.02
2928 3440 6.315393 TCAAAAACGCTCTTATATTCTGGGAC 59.685 38.462 0.00 0.00 0.00 4.46
2929 3441 6.315393 GTCAAAAACGCTCTTATATTCTGGGA 59.685 38.462 0.00 0.00 0.00 4.37
2930 3442 6.093495 TGTCAAAAACGCTCTTATATTCTGGG 59.907 38.462 0.00 0.00 0.00 4.45
2931 3443 6.961554 GTGTCAAAAACGCTCTTATATTCTGG 59.038 38.462 0.00 0.00 35.42 3.86
2932 3444 7.743104 AGTGTCAAAAACGCTCTTATATTCTG 58.257 34.615 0.00 0.00 45.69 3.02
2933 3445 7.907214 AGTGTCAAAAACGCTCTTATATTCT 57.093 32.000 0.00 0.00 45.69 2.40
2934 3446 9.638300 CATAGTGTCAAAAACGCTCTTATATTC 57.362 33.333 0.00 0.00 45.69 1.75
2935 3447 8.122952 GCATAGTGTCAAAAACGCTCTTATATT 58.877 33.333 0.00 0.00 45.69 1.28
2936 3448 7.495934 AGCATAGTGTCAAAAACGCTCTTATAT 59.504 33.333 0.00 0.00 45.69 0.86
2937 3449 6.816640 AGCATAGTGTCAAAAACGCTCTTATA 59.183 34.615 0.00 0.00 45.69 0.98
2938 3450 5.643777 AGCATAGTGTCAAAAACGCTCTTAT 59.356 36.000 0.00 0.00 45.69 1.73
2939 3451 4.994852 AGCATAGTGTCAAAAACGCTCTTA 59.005 37.500 0.00 0.00 45.69 2.10
2940 3452 3.815401 AGCATAGTGTCAAAAACGCTCTT 59.185 39.130 0.00 0.00 45.69 2.85
2941 3453 3.403038 AGCATAGTGTCAAAAACGCTCT 58.597 40.909 0.00 0.00 45.69 4.09
2942 3454 3.813529 AGCATAGTGTCAAAAACGCTC 57.186 42.857 0.00 0.00 45.69 5.03
2967 3479 9.609950 CGTCCCAAAATATAAGAACGTTTTTAA 57.390 29.630 14.41 5.85 0.00 1.52
2968 3480 8.235905 CCGTCCCAAAATATAAGAACGTTTTTA 58.764 33.333 13.02 13.02 0.00 1.52
2969 3481 7.040548 TCCGTCCCAAAATATAAGAACGTTTTT 60.041 33.333 9.22 9.22 0.00 1.94
2970 3482 6.430616 TCCGTCCCAAAATATAAGAACGTTTT 59.569 34.615 0.46 0.00 0.00 2.43
2971 3483 5.939296 TCCGTCCCAAAATATAAGAACGTTT 59.061 36.000 0.46 0.00 0.00 3.60
2972 3484 5.490159 TCCGTCCCAAAATATAAGAACGTT 58.510 37.500 0.00 0.00 0.00 3.99
2973 3485 5.088680 TCCGTCCCAAAATATAAGAACGT 57.911 39.130 0.00 0.00 0.00 3.99
2974 3486 4.510340 CCTCCGTCCCAAAATATAAGAACG 59.490 45.833 0.00 0.00 0.00 3.95
2975 3487 4.820173 CCCTCCGTCCCAAAATATAAGAAC 59.180 45.833 0.00 0.00 0.00 3.01
2976 3488 4.722781 TCCCTCCGTCCCAAAATATAAGAA 59.277 41.667 0.00 0.00 0.00 2.52
2977 3489 4.300345 TCCCTCCGTCCCAAAATATAAGA 58.700 43.478 0.00 0.00 0.00 2.10
2978 3490 4.102681 ACTCCCTCCGTCCCAAAATATAAG 59.897 45.833 0.00 0.00 0.00 1.73
2979 3491 4.042174 ACTCCCTCCGTCCCAAAATATAA 58.958 43.478 0.00 0.00 0.00 0.98
2980 3492 3.660959 ACTCCCTCCGTCCCAAAATATA 58.339 45.455 0.00 0.00 0.00 0.86
2981 3493 2.488836 ACTCCCTCCGTCCCAAAATAT 58.511 47.619 0.00 0.00 0.00 1.28
2982 3494 1.961133 ACTCCCTCCGTCCCAAAATA 58.039 50.000 0.00 0.00 0.00 1.40
2983 3495 1.961133 TACTCCCTCCGTCCCAAAAT 58.039 50.000 0.00 0.00 0.00 1.82
2984 3496 1.961133 ATACTCCCTCCGTCCCAAAA 58.039 50.000 0.00 0.00 0.00 2.44
2985 3497 2.852714 TATACTCCCTCCGTCCCAAA 57.147 50.000 0.00 0.00 0.00 3.28
2986 3498 2.852714 TTATACTCCCTCCGTCCCAA 57.147 50.000 0.00 0.00 0.00 4.12
2987 3499 4.687262 ATATTATACTCCCTCCGTCCCA 57.313 45.455 0.00 0.00 0.00 4.37
2988 3500 7.179872 AGTTTTATATTATACTCCCTCCGTCCC 59.820 40.741 0.00 0.00 0.00 4.46
2989 3501 8.033626 CAGTTTTATATTATACTCCCTCCGTCC 58.966 40.741 0.00 0.00 0.00 4.79
2990 3502 8.583296 ACAGTTTTATATTATACTCCCTCCGTC 58.417 37.037 0.00 0.00 0.00 4.79
2991 3503 8.488308 ACAGTTTTATATTATACTCCCTCCGT 57.512 34.615 0.00 0.00 0.00 4.69
2992 3504 9.420551 GAACAGTTTTATATTATACTCCCTCCG 57.579 37.037 0.00 0.00 0.00 4.63
3026 3538 7.954088 TGTAAACTACATGGCTGTTGCCTGT 62.954 44.000 8.57 11.54 45.95 4.00
3049 3576 4.270808 TGCATGCTTATGTCTACGATGTTG 59.729 41.667 20.33 0.00 0.00 3.33
3051 3578 4.058721 TGCATGCTTATGTCTACGATGT 57.941 40.909 20.33 0.00 0.00 3.06
3052 3579 6.710692 TTATGCATGCTTATGTCTACGATG 57.289 37.500 20.33 0.00 0.00 3.84
3053 3580 9.605275 ATTATTATGCATGCTTATGTCTACGAT 57.395 29.630 20.33 7.22 0.00 3.73
3090 3617 6.151144 ACAGTCAGGTCAACCTTTTTATATGC 59.849 38.462 0.00 0.00 46.09 3.14
3103 3630 0.685097 GGGCTACACAGTCAGGTCAA 59.315 55.000 0.00 0.00 0.00 3.18
3164 3692 9.902684 AATTCAATTATGCACATAAAATGGGAA 57.097 25.926 7.14 7.31 36.90 3.97
3222 3750 6.767524 AACAATGTTCTGTTGTTCAAGGTA 57.232 33.333 0.00 0.00 44.10 3.08
3233 3763 6.974622 GTCAAGTTTCATCAACAATGTTCTGT 59.025 34.615 0.00 0.00 37.93 3.41
3381 3911 3.187227 AGCGTATGTTGCAAGAAGAGTTG 59.813 43.478 0.00 0.00 33.85 3.16
3447 3977 8.638565 GCTAACACAATTAAATGCTTACACAAG 58.361 33.333 0.00 0.00 34.66 3.16
3489 4276 6.286240 TCACACTTTATGATGCTACAGAGT 57.714 37.500 0.00 0.00 0.00 3.24
3568 4618 7.290014 GGGGGAATAAGAACATTTATCAATGGT 59.710 37.037 4.70 0.00 43.53 3.55
3588 4638 6.780198 ATAAATAGAACTATGCTGGGGGAA 57.220 37.500 0.00 0.00 0.00 3.97
3619 4669 9.503427 CATAATGCTAATGAATGAGTGCATATG 57.497 33.333 0.00 0.00 39.76 1.78
3711 4761 5.308497 TCCCTCACCTATTTGTACTTCACAA 59.692 40.000 0.00 0.00 45.49 3.33
3767 4822 6.041979 ACAGTACATATGCTCATGTATCCACA 59.958 38.462 1.58 0.00 41.97 4.17
3952 5007 1.133790 GACACAATGCAATCCAGGCTC 59.866 52.381 0.00 0.00 0.00 4.70
4081 5136 1.829849 CTGTGGAAGCTCTCAGGATCA 59.170 52.381 0.00 0.00 0.00 2.92
4104 5159 1.153549 GTCCAAGAGTAGGCAGGCG 60.154 63.158 0.00 0.00 0.00 5.52
4142 5197 2.678324 CCCGCTACAAGCTAAGCTATC 58.322 52.381 12.27 0.00 38.25 2.08
4171 5226 7.701924 CACAGCAAACACATAATATCGGAAAAT 59.298 33.333 0.00 0.00 0.00 1.82
4177 5232 7.305590 GCAATTCACAGCAAACACATAATATCG 60.306 37.037 0.00 0.00 0.00 2.92
4180 5235 6.923012 AGCAATTCACAGCAAACACATAATA 58.077 32.000 0.00 0.00 0.00 0.98
4181 5236 5.786311 AGCAATTCACAGCAAACACATAAT 58.214 33.333 0.00 0.00 0.00 1.28
4182 5237 5.199024 AGCAATTCACAGCAAACACATAA 57.801 34.783 0.00 0.00 0.00 1.90
4183 5238 4.852134 AGCAATTCACAGCAAACACATA 57.148 36.364 0.00 0.00 0.00 2.29
4184 5239 3.738830 AGCAATTCACAGCAAACACAT 57.261 38.095 0.00 0.00 0.00 3.21
4230 5293 2.159268 TGGAGTACAACGACGACAAACA 60.159 45.455 0.00 0.00 0.00 2.83
4295 5362 0.804989 GCGGCAGCTCAAACAGTTAT 59.195 50.000 0.00 0.00 41.01 1.89
4296 5363 0.533978 TGCGGCAGCTCAAACAGTTA 60.534 50.000 10.92 0.00 45.42 2.24
4298 5365 2.203195 TGCGGCAGCTCAAACAGT 60.203 55.556 10.92 0.00 45.42 3.55
4299 5366 2.256591 ACTGCGGCAGCTCAAACAG 61.257 57.895 28.80 4.18 45.42 3.16
4300 5367 2.203195 ACTGCGGCAGCTCAAACA 60.203 55.556 28.80 0.00 45.42 2.83
4345 5412 4.997395 TCTGCACTGAAACCATCTTAAGTC 59.003 41.667 1.63 0.00 0.00 3.01
4348 5415 5.620206 TCTTCTGCACTGAAACCATCTTAA 58.380 37.500 0.00 0.00 0.00 1.85
4350 5417 4.090761 TCTTCTGCACTGAAACCATCTT 57.909 40.909 0.00 0.00 0.00 2.40
4398 5465 7.782049 TCTGTAACTCCAACCATAACATCTAG 58.218 38.462 0.00 0.00 0.00 2.43
4400 5467 6.213600 ACTCTGTAACTCCAACCATAACATCT 59.786 38.462 0.00 0.00 0.00 2.90
4425 5492 2.133281 TCGAACGGAGGGAGTATGAA 57.867 50.000 0.00 0.00 0.00 2.57
4430 5503 2.830321 AGTATTTTCGAACGGAGGGAGT 59.170 45.455 0.00 0.00 0.00 3.85
4432 5505 2.167075 GGAGTATTTTCGAACGGAGGGA 59.833 50.000 0.00 0.00 0.00 4.20
4443 5516 4.417426 TCCGGATTGAGGGAGTATTTTC 57.583 45.455 0.00 0.00 0.00 2.29
4457 5530 3.449737 TCTCCAACGAGTAATTCCGGATT 59.550 43.478 4.15 0.00 37.40 3.01
4458 5531 3.028850 TCTCCAACGAGTAATTCCGGAT 58.971 45.455 4.15 0.00 37.40 4.18
4486 5559 3.551046 CCGACGAGTAATTCCTGATGGAG 60.551 52.174 0.00 0.00 44.24 3.86
4489 5562 3.315470 TCTCCGACGAGTAATTCCTGATG 59.685 47.826 0.00 0.00 37.40 3.07
4490 5563 3.552875 TCTCCGACGAGTAATTCCTGAT 58.447 45.455 0.00 0.00 37.40 2.90
4493 5566 4.401519 TCATTTCTCCGACGAGTAATTCCT 59.598 41.667 0.00 0.00 34.81 3.36
4501 5574 1.978542 ACGTTCATTTCTCCGACGAG 58.021 50.000 0.00 0.00 37.20 4.18
4502 5575 3.376234 AGATACGTTCATTTCTCCGACGA 59.624 43.478 0.00 0.00 37.20 4.20
4503 5576 3.692576 AGATACGTTCATTTCTCCGACG 58.307 45.455 0.00 0.00 39.43 5.12
4504 5577 5.213675 CCTAGATACGTTCATTTCTCCGAC 58.786 45.833 0.00 0.00 0.00 4.79
4559 5632 9.574458 TTCAAAATTACTCGTCACAAAAATGAA 57.426 25.926 0.00 0.00 0.00 2.57
4560 5633 9.015577 GTTCAAAATTACTCGTCACAAAAATGA 57.984 29.630 0.00 0.00 0.00 2.57
4561 5634 8.802856 TGTTCAAAATTACTCGTCACAAAAATG 58.197 29.630 0.00 0.00 0.00 2.32
4562 5635 8.918961 TGTTCAAAATTACTCGTCACAAAAAT 57.081 26.923 0.00 0.00 0.00 1.82
4563 5636 8.237949 TCTGTTCAAAATTACTCGTCACAAAAA 58.762 29.630 0.00 0.00 0.00 1.94
4564 5637 7.753659 TCTGTTCAAAATTACTCGTCACAAAA 58.246 30.769 0.00 0.00 0.00 2.44
4565 5638 7.310072 TCTGTTCAAAATTACTCGTCACAAA 57.690 32.000 0.00 0.00 0.00 2.83
4567 5640 5.465390 CCTCTGTTCAAAATTACTCGTCACA 59.535 40.000 0.00 0.00 0.00 3.58
4568 5641 5.465724 ACCTCTGTTCAAAATTACTCGTCAC 59.534 40.000 0.00 0.00 0.00 3.67
4570 5643 7.829378 ATACCTCTGTTCAAAATTACTCGTC 57.171 36.000 0.00 0.00 0.00 4.20
4571 5644 9.886132 ATTATACCTCTGTTCAAAATTACTCGT 57.114 29.630 0.00 0.00 0.00 4.18
4579 5652 9.787435 AGTTACACATTATACCTCTGTTCAAAA 57.213 29.630 0.00 0.00 0.00 2.44
4580 5653 9.214957 CAGTTACACATTATACCTCTGTTCAAA 57.785 33.333 0.00 0.00 0.00 2.69
4581 5654 8.372459 ACAGTTACACATTATACCTCTGTTCAA 58.628 33.333 0.00 0.00 31.02 2.69
4582 5655 7.903145 ACAGTTACACATTATACCTCTGTTCA 58.097 34.615 0.00 0.00 31.02 3.18
4583 5656 8.773404 AACAGTTACACATTATACCTCTGTTC 57.227 34.615 0.00 0.00 38.61 3.18
4584 5657 9.569122 AAAACAGTTACACATTATACCTCTGTT 57.431 29.630 0.00 0.00 42.64 3.16
4585 5658 9.569122 AAAAACAGTTACACATTATACCTCTGT 57.431 29.630 0.00 0.00 35.58 3.41
4712 5785 8.567948 CACGGGCATTGTTCTATAGAATAAAAT 58.432 33.333 23.34 17.17 38.35 1.82
4725 5798 1.729131 CAACGCACGGGCATTGTTC 60.729 57.895 10.90 0.00 38.34 3.18
4726 5799 2.334653 CAACGCACGGGCATTGTT 59.665 55.556 10.90 2.50 38.34 2.83
4727 5800 3.669344 CCAACGCACGGGCATTGT 61.669 61.111 18.10 0.00 41.39 2.71
4728 5801 2.913765 TTCCAACGCACGGGCATTG 61.914 57.895 12.30 12.30 42.54 2.82
4729 5802 2.596046 TTCCAACGCACGGGCATT 60.596 55.556 11.77 0.00 41.24 3.56
4730 5803 3.361977 GTTCCAACGCACGGGCAT 61.362 61.111 11.77 0.00 41.24 4.40
4740 5813 9.939802 ACTAGAATATTTATATCCCGTTCCAAC 57.060 33.333 0.00 0.00 0.00 3.77
4743 5816 9.727627 CGTACTAGAATATTTATATCCCGTTCC 57.272 37.037 0.00 0.00 0.00 3.62
4759 5832 9.517609 CTAAATCACAAGCTAACGTACTAGAAT 57.482 33.333 0.00 0.00 0.00 2.40
4760 5833 7.487189 GCTAAATCACAAGCTAACGTACTAGAA 59.513 37.037 0.00 0.00 35.80 2.10
4761 5834 6.971184 GCTAAATCACAAGCTAACGTACTAGA 59.029 38.462 0.00 0.00 35.80 2.43
4762 5835 7.151103 GCTAAATCACAAGCTAACGTACTAG 57.849 40.000 0.00 0.00 35.80 2.57
4773 5846 9.956720 ATTATTATTGACAGCTAAATCACAAGC 57.043 29.630 0.00 0.00 39.08 4.01
4783 5856 9.394767 ACACAATCACATTATTATTGACAGCTA 57.605 29.630 0.00 0.00 35.18 3.32
4784 5857 8.284945 ACACAATCACATTATTATTGACAGCT 57.715 30.769 0.00 0.00 35.18 4.24
4810 5883 9.357652 CGGTCAGAATTTGATGAACATTTATTT 57.642 29.630 5.49 0.00 38.29 1.40
4811 5884 7.975616 CCGGTCAGAATTTGATGAACATTTATT 59.024 33.333 0.00 0.00 38.29 1.40
4812 5885 7.416664 CCCGGTCAGAATTTGATGAACATTTAT 60.417 37.037 0.00 0.00 38.29 1.40
4813 5886 6.127758 CCCGGTCAGAATTTGATGAACATTTA 60.128 38.462 0.00 0.00 38.29 1.40
4814 5887 5.336690 CCCGGTCAGAATTTGATGAACATTT 60.337 40.000 0.00 0.00 38.29 2.32
4815 5888 4.158394 CCCGGTCAGAATTTGATGAACATT 59.842 41.667 0.00 0.00 38.29 2.71
4816 5889 3.696051 CCCGGTCAGAATTTGATGAACAT 59.304 43.478 0.00 0.00 38.29 2.71
4817 5890 3.081061 CCCGGTCAGAATTTGATGAACA 58.919 45.455 0.00 0.00 38.29 3.18
4818 5891 2.159379 GCCCGGTCAGAATTTGATGAAC 60.159 50.000 0.00 0.00 38.29 3.18
4819 5892 2.091541 GCCCGGTCAGAATTTGATGAA 58.908 47.619 0.00 0.00 38.29 2.57
4820 5893 1.750193 GCCCGGTCAGAATTTGATGA 58.250 50.000 0.00 0.00 38.29 2.92
4821 5894 0.378257 CGCCCGGTCAGAATTTGATG 59.622 55.000 0.00 0.00 38.29 3.07
4822 5895 0.748005 CCGCCCGGTCAGAATTTGAT 60.748 55.000 0.00 0.00 38.29 2.57
4823 5896 1.376683 CCGCCCGGTCAGAATTTGA 60.377 57.895 0.00 0.00 0.00 2.69
4824 5897 1.376683 TCCGCCCGGTCAGAATTTG 60.377 57.895 6.61 0.00 36.47 2.32
4825 5898 1.376812 GTCCGCCCGGTCAGAATTT 60.377 57.895 6.61 0.00 36.47 1.82
4826 5899 2.267961 GTCCGCCCGGTCAGAATT 59.732 61.111 6.61 0.00 36.47 2.17
4827 5900 4.143333 CGTCCGCCCGGTCAGAAT 62.143 66.667 6.61 0.00 36.47 2.40
4844 5917 4.629523 TGTCCGTTTGGGTCGGCC 62.630 66.667 0.00 0.00 46.49 6.13
4845 5918 1.726533 TTTTGTCCGTTTGGGTCGGC 61.727 55.000 0.00 0.00 46.49 5.54
4847 5920 0.309612 CCTTTTGTCCGTTTGGGTCG 59.690 55.000 0.00 0.00 37.00 4.79
4848 5921 0.031585 GCCTTTTGTCCGTTTGGGTC 59.968 55.000 0.00 0.00 37.00 4.46
4849 5922 1.730451 CGCCTTTTGTCCGTTTGGGT 61.730 55.000 0.00 0.00 37.00 4.51
4850 5923 1.007849 CGCCTTTTGTCCGTTTGGG 60.008 57.895 0.00 0.00 35.24 4.12
4851 5924 1.007849 CCGCCTTTTGTCCGTTTGG 60.008 57.895 0.00 0.00 0.00 3.28
4852 5925 0.317519 GTCCGCCTTTTGTCCGTTTG 60.318 55.000 0.00 0.00 0.00 2.93
4853 5926 1.778027 CGTCCGCCTTTTGTCCGTTT 61.778 55.000 0.00 0.00 0.00 3.60
4854 5927 2.248835 CGTCCGCCTTTTGTCCGTT 61.249 57.895 0.00 0.00 0.00 4.44
4855 5928 2.647680 TTCGTCCGCCTTTTGTCCGT 62.648 55.000 0.00 0.00 0.00 4.69
4856 5929 1.500512 TTTCGTCCGCCTTTTGTCCG 61.501 55.000 0.00 0.00 0.00 4.79
4857 5930 0.879090 ATTTCGTCCGCCTTTTGTCC 59.121 50.000 0.00 0.00 0.00 4.02
4858 5931 1.463528 CGATTTCGTCCGCCTTTTGTC 60.464 52.381 0.00 0.00 34.11 3.18
4859 5932 0.515564 CGATTTCGTCCGCCTTTTGT 59.484 50.000 0.00 0.00 34.11 2.83
4860 5933 0.793104 GCGATTTCGTCCGCCTTTTG 60.793 55.000 1.55 0.00 45.06 2.44
4861 5934 1.500396 GCGATTTCGTCCGCCTTTT 59.500 52.632 1.55 0.00 45.06 2.27
4862 5935 3.174788 GCGATTTCGTCCGCCTTT 58.825 55.556 1.55 0.00 45.06 3.11
4870 5943 1.665599 AAACGGACGGCGATTTCGT 60.666 52.632 16.62 14.37 44.03 3.85
4871 5944 1.225637 CAAACGGACGGCGATTTCG 60.226 57.895 16.62 13.70 43.27 3.46
4872 5945 1.133869 CCAAACGGACGGCGATTTC 59.866 57.895 16.62 0.00 0.00 2.17
4873 5946 2.329614 CCCAAACGGACGGCGATTT 61.330 57.895 16.62 5.62 0.00 2.17
4874 5947 2.744709 CCCAAACGGACGGCGATT 60.745 61.111 16.62 0.00 0.00 3.34
4875 5948 3.945304 GACCCAAACGGACGGCGAT 62.945 63.158 16.62 0.00 34.64 4.58
4876 5949 4.668118 GACCCAAACGGACGGCGA 62.668 66.667 16.62 0.00 34.64 5.54
4890 5963 4.324991 AACTCCAACGGGCCGACC 62.325 66.667 35.78 0.00 0.00 4.79
4891 5964 3.047877 CAACTCCAACGGGCCGAC 61.048 66.667 35.78 0.00 0.00 4.79
4894 5967 3.056328 GAGCAACTCCAACGGGCC 61.056 66.667 0.00 0.00 0.00 5.80
4895 5968 0.321298 TAAGAGCAACTCCAACGGGC 60.321 55.000 0.00 0.00 0.00 6.13
4896 5969 2.403252 ATAAGAGCAACTCCAACGGG 57.597 50.000 0.00 0.00 0.00 5.28
4897 5970 4.124851 AGTATAAGAGCAACTCCAACGG 57.875 45.455 0.00 0.00 0.00 4.44
4898 5971 5.637810 TCAAAGTATAAGAGCAACTCCAACG 59.362 40.000 0.00 0.00 0.00 4.10
4899 5972 7.617041 ATCAAAGTATAAGAGCAACTCCAAC 57.383 36.000 0.00 0.00 0.00 3.77
4900 5973 9.383519 CTAATCAAAGTATAAGAGCAACTCCAA 57.616 33.333 0.00 0.00 0.00 3.53
4901 5974 8.758829 TCTAATCAAAGTATAAGAGCAACTCCA 58.241 33.333 0.00 0.00 0.00 3.86
4902 5975 9.601217 TTCTAATCAAAGTATAAGAGCAACTCC 57.399 33.333 0.00 0.00 0.00 3.85
4945 6018 9.588096 ACTTACCTTCTAAATGAATTCCACTTT 57.412 29.630 2.27 3.36 33.71 2.66
4961 6034 9.959721 TCAATCAGCTTAATTTACTTACCTTCT 57.040 29.630 0.00 0.00 0.00 2.85
4984 6057 8.685427 CCAACCTTTCATGTACATGATAATCAA 58.315 33.333 33.23 23.68 46.12 2.57
4985 6058 8.052141 TCCAACCTTTCATGTACATGATAATCA 58.948 33.333 33.23 18.87 46.12 2.57
4986 6059 8.450578 TCCAACCTTTCATGTACATGATAATC 57.549 34.615 33.23 0.00 46.12 1.75
4987 6060 8.853126 CATCCAACCTTTCATGTACATGATAAT 58.147 33.333 33.23 18.93 46.12 1.28
4988 6061 8.052141 TCATCCAACCTTTCATGTACATGATAA 58.948 33.333 33.23 26.34 46.12 1.75
4989 6062 7.572814 TCATCCAACCTTTCATGTACATGATA 58.427 34.615 33.23 27.54 46.12 2.15
4990 6063 6.425735 TCATCCAACCTTTCATGTACATGAT 58.574 36.000 33.23 19.21 46.12 2.45
4991 6064 5.814481 TCATCCAACCTTTCATGTACATGA 58.186 37.500 30.29 30.29 45.30 3.07
4992 6065 6.405065 CCTTCATCCAACCTTTCATGTACATG 60.405 42.308 26.83 26.83 40.09 3.21
4993 6066 5.653769 CCTTCATCCAACCTTTCATGTACAT 59.346 40.000 1.41 1.41 0.00 2.29
4994 6067 5.009631 CCTTCATCCAACCTTTCATGTACA 58.990 41.667 0.00 0.00 0.00 2.90
4995 6068 5.253330 TCCTTCATCCAACCTTTCATGTAC 58.747 41.667 0.00 0.00 0.00 2.90
4996 6069 5.014123 ACTCCTTCATCCAACCTTTCATGTA 59.986 40.000 0.00 0.00 0.00 2.29
4997 6070 4.202609 ACTCCTTCATCCAACCTTTCATGT 60.203 41.667 0.00 0.00 0.00 3.21
4998 6071 4.157289 CACTCCTTCATCCAACCTTTCATG 59.843 45.833 0.00 0.00 0.00 3.07
4999 6072 4.338879 CACTCCTTCATCCAACCTTTCAT 58.661 43.478 0.00 0.00 0.00 2.57
5000 6073 3.498481 CCACTCCTTCATCCAACCTTTCA 60.498 47.826 0.00 0.00 0.00 2.69
5001 6074 3.084786 CCACTCCTTCATCCAACCTTTC 58.915 50.000 0.00 0.00 0.00 2.62
5002 6075 2.447047 ACCACTCCTTCATCCAACCTTT 59.553 45.455 0.00 0.00 0.00 3.11
5003 6076 2.065799 ACCACTCCTTCATCCAACCTT 58.934 47.619 0.00 0.00 0.00 3.50
5004 6077 1.352352 CACCACTCCTTCATCCAACCT 59.648 52.381 0.00 0.00 0.00 3.50
5005 6078 1.351017 TCACCACTCCTTCATCCAACC 59.649 52.381 0.00 0.00 0.00 3.77
5006 6079 2.303022 TCTCACCACTCCTTCATCCAAC 59.697 50.000 0.00 0.00 0.00 3.77
5007 6080 2.619931 TCTCACCACTCCTTCATCCAA 58.380 47.619 0.00 0.00 0.00 3.53
5008 6081 2.325661 TCTCACCACTCCTTCATCCA 57.674 50.000 0.00 0.00 0.00 3.41
5009 6082 2.834549 TCTTCTCACCACTCCTTCATCC 59.165 50.000 0.00 0.00 0.00 3.51
5010 6083 4.543590 TTCTTCTCACCACTCCTTCATC 57.456 45.455 0.00 0.00 0.00 2.92
5011 6084 4.982241 TTTCTTCTCACCACTCCTTCAT 57.018 40.909 0.00 0.00 0.00 2.57
5012 6085 4.164221 ACTTTTCTTCTCACCACTCCTTCA 59.836 41.667 0.00 0.00 0.00 3.02
5013 6086 4.513318 CACTTTTCTTCTCACCACTCCTTC 59.487 45.833 0.00 0.00 0.00 3.46
5014 6087 4.164221 TCACTTTTCTTCTCACCACTCCTT 59.836 41.667 0.00 0.00 0.00 3.36
5015 6088 3.711704 TCACTTTTCTTCTCACCACTCCT 59.288 43.478 0.00 0.00 0.00 3.69
5016 6089 4.073293 TCACTTTTCTTCTCACCACTCC 57.927 45.455 0.00 0.00 0.00 3.85
5017 6090 6.038714 ACATTTCACTTTTCTTCTCACCACTC 59.961 38.462 0.00 0.00 0.00 3.51
5018 6091 5.888161 ACATTTCACTTTTCTTCTCACCACT 59.112 36.000 0.00 0.00 0.00 4.00
5019 6092 5.973565 CACATTTCACTTTTCTTCTCACCAC 59.026 40.000 0.00 0.00 0.00 4.16
5020 6093 5.885352 TCACATTTCACTTTTCTTCTCACCA 59.115 36.000 0.00 0.00 0.00 4.17
5021 6094 6.377327 TCACATTTCACTTTTCTTCTCACC 57.623 37.500 0.00 0.00 0.00 4.02
5022 6095 7.475840 AGTTCACATTTCACTTTTCTTCTCAC 58.524 34.615 0.00 0.00 0.00 3.51
5023 6096 7.630242 AGTTCACATTTCACTTTTCTTCTCA 57.370 32.000 0.00 0.00 0.00 3.27
5024 6097 9.439537 GTAAGTTCACATTTCACTTTTCTTCTC 57.560 33.333 0.00 0.00 32.88 2.87
5025 6098 8.122952 CGTAAGTTCACATTTCACTTTTCTTCT 58.877 33.333 0.00 0.00 32.88 2.85
5026 6099 8.258047 CGTAAGTTCACATTTCACTTTTCTTC 57.742 34.615 0.00 0.00 32.88 2.87


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.