Multiple sequence alignment - TraesCS3A01G519200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G519200 chr3A 100.000 2462 0 0 1 2462 737132206 737134667 0.000000e+00 4547.0
1 TraesCS3A01G519200 chr3A 84.743 721 78 14 1068 1786 737114345 737115035 0.000000e+00 693.0
2 TraesCS3A01G519200 chr3A 88.961 154 15 2 729 881 737113696 737113848 3.230000e-44 189.0
3 TraesCS3A01G519200 chr3A 84.211 171 18 3 508 678 737113512 737113673 9.110000e-35 158.0
4 TraesCS3A01G519200 chr3A 80.420 143 19 8 934 1067 737114097 737114239 1.560000e-17 100.0
5 TraesCS3A01G519200 chr3A 95.349 43 2 0 903 945 737171323 737171365 4.390000e-08 69.4
6 TraesCS3A01G519200 chrUn 92.162 1110 43 19 638 1744 46174998 46176066 0.000000e+00 1528.0
7 TraesCS3A01G519200 chrUn 85.408 747 78 14 1067 1812 46131203 46131919 0.000000e+00 747.0
8 TraesCS3A01G519200 chrUn 92.152 446 33 2 2006 2450 46176117 46176561 1.610000e-176 628.0
9 TraesCS3A01G519200 chrUn 86.667 120 12 4 942 1057 46130969 46131088 1.990000e-26 130.0
10 TraesCS3A01G519200 chrUn 94.872 39 2 0 907 945 46178427 46178465 7.350000e-06 62.1
11 TraesCS3A01G519200 chr3B 92.942 921 39 6 936 1854 813772676 813771780 0.000000e+00 1317.0
12 TraesCS3A01G519200 chr3B 85.294 748 75 16 1067 1813 813753080 813753793 0.000000e+00 739.0
13 TraesCS3A01G519200 chr3B 89.744 507 48 4 1958 2462 813770053 813769549 0.000000e+00 645.0
14 TraesCS3A01G519200 chr3B 85.866 566 67 10 1067 1622 813742592 813743154 7.580000e-165 590.0
15 TraesCS3A01G519200 chr3B 93.267 401 24 1 1 398 722455068 722454668 2.730000e-164 588.0
16 TraesCS3A01G519200 chr3B 79.606 559 62 24 1279 1812 813704281 813704812 1.080000e-93 353.0
17 TraesCS3A01G519200 chr3B 85.981 214 29 1 1080 1293 813703971 813704183 6.850000e-56 228.0
18 TraesCS3A01G519200 chr3B 91.176 102 7 2 1850 1949 813770200 813770099 1.190000e-28 137.0
19 TraesCS3A01G519200 chr3B 91.209 91 5 3 1869 1957 813770312 813770223 1.200000e-23 121.0
20 TraesCS3A01G519200 chr6B 96.020 402 13 1 1 399 542663026 542662625 0.000000e+00 651.0
21 TraesCS3A01G519200 chr6B 85.149 101 14 1 1958 2057 585798607 585798507 4.330000e-18 102.0
22 TraesCS3A01G519200 chr2B 95.577 407 13 3 1 402 89439083 89439489 0.000000e+00 647.0
23 TraesCS3A01G519200 chr4B 95.262 401 16 1 1 398 134927141 134927541 1.240000e-177 632.0
24 TraesCS3A01G519200 chr4B 94.763 401 17 2 1 398 369929112 369928713 2.690000e-174 621.0
25 TraesCS3A01G519200 chr4B 93.580 405 22 2 1 402 483052627 483052224 3.500000e-168 601.0
26 TraesCS3A01G519200 chr7B 94.030 402 21 1 1 399 41489334 41488933 7.530000e-170 606.0
27 TraesCS3A01G519200 chr2D 93.300 403 22 3 1 399 88389586 88389185 7.580000e-165 590.0
28 TraesCS3A01G519200 chr1D 93.284 402 23 2 1 398 399186926 399187327 7.580000e-165 590.0
29 TraesCS3A01G519200 chr6D 90.816 98 9 0 1958 2055 392273794 392273697 5.520000e-27 132.0
30 TraesCS3A01G519200 chr6A 89.796 98 10 0 1958 2055 538098399 538098302 2.570000e-25 126.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G519200 chr3A 737132206 737134667 2461 False 4547.000000 4547 100.00000 1 2462 1 chr3A.!!$F1 2461
1 TraesCS3A01G519200 chr3A 737113512 737115035 1523 False 285.000000 693 84.58375 508 1786 4 chr3A.!!$F3 1278
2 TraesCS3A01G519200 chrUn 46174998 46178465 3467 False 739.366667 1528 93.06200 638 2450 3 chrUn.!!$F2 1812
3 TraesCS3A01G519200 chrUn 46130969 46131919 950 False 438.500000 747 86.03750 942 1812 2 chrUn.!!$F1 870
4 TraesCS3A01G519200 chr3B 813753080 813753793 713 False 739.000000 739 85.29400 1067 1813 1 chr3B.!!$F2 746
5 TraesCS3A01G519200 chr3B 813742592 813743154 562 False 590.000000 590 85.86600 1067 1622 1 chr3B.!!$F1 555
6 TraesCS3A01G519200 chr3B 813769549 813772676 3127 True 555.000000 1317 91.26775 936 2462 4 chr3B.!!$R2 1526
7 TraesCS3A01G519200 chr3B 813703971 813704812 841 False 290.500000 353 82.79350 1080 1812 2 chr3B.!!$F3 732

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
31 32 0.031857 CATCGGCTGTGGTTTTTGCA 59.968 50.0 0.0 0.0 0.0 4.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1812 2298 0.036765 AAAGGTCATGCGCCTTCGTA 60.037 50.0 17.75 0.0 44.84 3.43 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.566824 TTTTTCTGGGAGCATCGGC 58.433 52.632 0.00 0.00 41.61 5.54
29 30 2.813100 GCATCGGCTGTGGTTTTTG 58.187 52.632 0.00 0.00 36.96 2.44
30 31 1.284297 GCATCGGCTGTGGTTTTTGC 61.284 55.000 0.00 0.00 36.96 3.68
31 32 0.031857 CATCGGCTGTGGTTTTTGCA 59.968 50.000 0.00 0.00 0.00 4.08
32 33 0.314935 ATCGGCTGTGGTTTTTGCAG 59.685 50.000 0.00 0.00 0.00 4.41
33 34 1.300080 CGGCTGTGGTTTTTGCAGG 60.300 57.895 0.00 0.00 0.00 4.85
34 35 1.733402 CGGCTGTGGTTTTTGCAGGA 61.733 55.000 0.00 0.00 0.00 3.86
35 36 0.463620 GGCTGTGGTTTTTGCAGGAA 59.536 50.000 0.00 0.00 0.00 3.36
36 37 1.070601 GGCTGTGGTTTTTGCAGGAAT 59.929 47.619 0.00 0.00 0.00 3.01
37 38 2.485302 GGCTGTGGTTTTTGCAGGAATT 60.485 45.455 0.00 0.00 0.00 2.17
38 39 3.205338 GCTGTGGTTTTTGCAGGAATTT 58.795 40.909 0.00 0.00 0.00 1.82
39 40 3.248363 GCTGTGGTTTTTGCAGGAATTTC 59.752 43.478 0.00 0.00 0.00 2.17
40 41 3.802866 TGTGGTTTTTGCAGGAATTTCC 58.197 40.909 7.39 7.39 36.58 3.13
41 42 2.799978 GTGGTTTTTGCAGGAATTTCCG 59.200 45.455 9.77 6.39 42.75 4.30
42 43 2.695666 TGGTTTTTGCAGGAATTTCCGA 59.304 40.909 9.77 0.00 42.75 4.55
43 44 3.323403 TGGTTTTTGCAGGAATTTCCGAT 59.677 39.130 9.77 0.00 42.75 4.18
44 45 3.926527 GGTTTTTGCAGGAATTTCCGATC 59.073 43.478 9.77 4.14 42.75 3.69
45 46 3.866883 TTTTGCAGGAATTTCCGATCC 57.133 42.857 9.77 1.14 42.75 3.36
46 47 1.378531 TTGCAGGAATTTCCGATCCG 58.621 50.000 9.77 0.00 42.75 4.18
56 57 4.856801 CCGATCCGGCCACCCTTG 62.857 72.222 2.24 0.00 41.17 3.61
57 58 3.781307 CGATCCGGCCACCCTTGA 61.781 66.667 2.24 0.00 0.00 3.02
58 59 2.190578 GATCCGGCCACCCTTGAG 59.809 66.667 2.24 0.00 0.00 3.02
59 60 2.610859 ATCCGGCCACCCTTGAGT 60.611 61.111 2.24 0.00 0.00 3.41
60 61 2.876368 GATCCGGCCACCCTTGAGTG 62.876 65.000 2.24 0.00 37.51 3.51
62 63 4.641645 CGGCCACCCTTGAGTGCA 62.642 66.667 2.24 0.00 36.38 4.57
63 64 2.036256 GGCCACCCTTGAGTGCAT 59.964 61.111 0.00 0.00 36.38 3.96
64 65 2.345760 GGCCACCCTTGAGTGCATG 61.346 63.158 0.00 0.00 36.38 4.06
65 66 2.345760 GCCACCCTTGAGTGCATGG 61.346 63.158 0.00 0.00 38.66 3.66
66 67 2.345760 CCACCCTTGAGTGCATGGC 61.346 63.158 0.00 0.00 37.86 4.40
67 68 2.360350 ACCCTTGAGTGCATGGCG 60.360 61.111 0.00 0.00 37.86 5.69
68 69 2.046023 CCCTTGAGTGCATGGCGA 60.046 61.111 0.00 0.00 37.86 5.54
69 70 1.452651 CCCTTGAGTGCATGGCGAT 60.453 57.895 0.00 0.00 37.86 4.58
70 71 1.442526 CCCTTGAGTGCATGGCGATC 61.443 60.000 0.00 0.00 37.86 3.69
71 72 0.745486 CCTTGAGTGCATGGCGATCA 60.745 55.000 0.00 0.00 33.22 2.92
72 73 0.656259 CTTGAGTGCATGGCGATCAG 59.344 55.000 0.00 0.00 29.87 2.90
73 74 0.745486 TTGAGTGCATGGCGATCAGG 60.745 55.000 0.00 0.00 29.87 3.86
74 75 1.890979 GAGTGCATGGCGATCAGGG 60.891 63.158 0.00 0.00 0.00 4.45
75 76 2.190313 GTGCATGGCGATCAGGGA 59.810 61.111 0.00 0.00 0.00 4.20
76 77 1.890979 GTGCATGGCGATCAGGGAG 60.891 63.158 0.00 0.00 0.00 4.30
77 78 2.281345 GCATGGCGATCAGGGAGG 60.281 66.667 0.00 0.00 0.00 4.30
78 79 2.281345 CATGGCGATCAGGGAGGC 60.281 66.667 0.00 0.00 0.00 4.70
79 80 2.769621 ATGGCGATCAGGGAGGCA 60.770 61.111 0.00 0.00 44.36 4.75
80 81 2.152058 ATGGCGATCAGGGAGGCAT 61.152 57.895 1.53 1.53 44.61 4.40
81 82 1.713005 ATGGCGATCAGGGAGGCATT 61.713 55.000 1.53 0.00 46.77 3.56
82 83 1.895707 GGCGATCAGGGAGGCATTG 60.896 63.158 0.00 0.00 0.00 2.82
83 84 1.895707 GCGATCAGGGAGGCATTGG 60.896 63.158 0.00 0.00 0.00 3.16
84 85 1.895707 CGATCAGGGAGGCATTGGC 60.896 63.158 1.17 1.17 40.13 4.52
94 95 3.625099 GCATTGGCCCTTGCAGAT 58.375 55.556 19.18 0.00 40.13 2.90
95 96 1.143183 GCATTGGCCCTTGCAGATG 59.857 57.895 19.18 5.44 40.13 2.90
96 97 1.324740 GCATTGGCCCTTGCAGATGA 61.325 55.000 19.18 0.00 40.13 2.92
97 98 0.458669 CATTGGCCCTTGCAGATGAC 59.541 55.000 0.00 0.00 40.13 3.06
98 99 0.685458 ATTGGCCCTTGCAGATGACC 60.685 55.000 0.00 0.00 40.13 4.02
99 100 1.792757 TTGGCCCTTGCAGATGACCT 61.793 55.000 0.00 0.00 40.13 3.85
100 101 1.452833 GGCCCTTGCAGATGACCTC 60.453 63.158 0.00 0.00 40.13 3.85
101 102 1.300963 GCCCTTGCAGATGACCTCA 59.699 57.895 0.00 0.00 37.47 3.86
102 103 0.322816 GCCCTTGCAGATGACCTCAA 60.323 55.000 0.00 0.00 37.47 3.02
103 104 1.684248 GCCCTTGCAGATGACCTCAAT 60.684 52.381 0.00 0.00 37.47 2.57
104 105 2.022195 CCCTTGCAGATGACCTCAATG 58.978 52.381 0.00 0.00 0.00 2.82
105 106 2.619849 CCCTTGCAGATGACCTCAATGT 60.620 50.000 0.00 0.00 0.00 2.71
106 107 3.087031 CCTTGCAGATGACCTCAATGTT 58.913 45.455 0.00 0.00 0.00 2.71
107 108 3.508793 CCTTGCAGATGACCTCAATGTTT 59.491 43.478 0.00 0.00 0.00 2.83
108 109 4.380233 CCTTGCAGATGACCTCAATGTTTC 60.380 45.833 0.00 0.00 0.00 2.78
109 110 3.753815 TGCAGATGACCTCAATGTTTCA 58.246 40.909 0.00 0.00 0.00 2.69
110 111 4.143543 TGCAGATGACCTCAATGTTTCAA 58.856 39.130 0.00 0.00 0.00 2.69
111 112 4.022935 TGCAGATGACCTCAATGTTTCAAC 60.023 41.667 0.00 0.00 0.00 3.18
112 113 4.217118 GCAGATGACCTCAATGTTTCAACT 59.783 41.667 0.00 0.00 0.00 3.16
113 114 5.412594 GCAGATGACCTCAATGTTTCAACTA 59.587 40.000 0.00 0.00 0.00 2.24
114 115 6.094603 GCAGATGACCTCAATGTTTCAACTAT 59.905 38.462 0.00 0.00 0.00 2.12
115 116 7.280876 GCAGATGACCTCAATGTTTCAACTATA 59.719 37.037 0.00 0.00 0.00 1.31
116 117 8.607459 CAGATGACCTCAATGTTTCAACTATAC 58.393 37.037 0.00 0.00 0.00 1.47
117 118 8.321353 AGATGACCTCAATGTTTCAACTATACA 58.679 33.333 0.00 0.00 0.00 2.29
118 119 8.862325 ATGACCTCAATGTTTCAACTATACAA 57.138 30.769 0.00 0.00 0.00 2.41
119 120 8.322906 TGACCTCAATGTTTCAACTATACAAG 57.677 34.615 0.00 0.00 0.00 3.16
120 121 7.936847 TGACCTCAATGTTTCAACTATACAAGT 59.063 33.333 0.00 0.00 41.49 3.16
121 122 8.099364 ACCTCAATGTTTCAACTATACAAGTG 57.901 34.615 0.00 0.00 38.88 3.16
122 123 7.174946 ACCTCAATGTTTCAACTATACAAGTGG 59.825 37.037 0.00 0.00 38.88 4.00
123 124 6.908825 TCAATGTTTCAACTATACAAGTGGC 58.091 36.000 0.00 0.00 38.88 5.01
124 125 5.545658 ATGTTTCAACTATACAAGTGGCG 57.454 39.130 0.00 0.00 38.88 5.69
125 126 4.382291 TGTTTCAACTATACAAGTGGCGT 58.618 39.130 0.00 0.00 38.88 5.68
126 127 4.449743 TGTTTCAACTATACAAGTGGCGTC 59.550 41.667 0.00 0.00 38.88 5.19
127 128 3.241067 TCAACTATACAAGTGGCGTCC 57.759 47.619 0.00 0.00 38.88 4.79
128 129 1.924524 CAACTATACAAGTGGCGTCCG 59.075 52.381 0.00 0.00 38.88 4.79
129 130 1.466856 ACTATACAAGTGGCGTCCGA 58.533 50.000 0.00 0.00 36.93 4.55
130 131 1.133790 ACTATACAAGTGGCGTCCGAC 59.866 52.381 0.00 0.00 36.93 4.79
131 132 1.404391 CTATACAAGTGGCGTCCGACT 59.596 52.381 0.00 0.00 0.00 4.18
132 133 0.172803 ATACAAGTGGCGTCCGACTC 59.827 55.000 0.00 0.00 0.00 3.36
133 134 2.191354 TACAAGTGGCGTCCGACTCG 62.191 60.000 0.00 0.00 0.00 4.18
134 135 2.981909 AAGTGGCGTCCGACTCGA 60.982 61.111 0.00 0.00 0.00 4.04
135 136 2.558286 AAGTGGCGTCCGACTCGAA 61.558 57.895 0.00 0.00 0.00 3.71
136 137 2.473664 AAGTGGCGTCCGACTCGAAG 62.474 60.000 0.00 0.00 0.00 3.79
137 138 3.744719 TGGCGTCCGACTCGAAGG 61.745 66.667 0.00 0.00 0.00 3.46
138 139 3.745803 GGCGTCCGACTCGAAGGT 61.746 66.667 0.00 0.00 0.00 3.50
139 140 2.504244 GCGTCCGACTCGAAGGTG 60.504 66.667 0.00 0.00 0.00 4.00
140 141 2.178521 CGTCCGACTCGAAGGTGG 59.821 66.667 0.00 0.00 0.00 4.61
141 142 2.623915 CGTCCGACTCGAAGGTGGT 61.624 63.158 0.00 0.00 0.00 4.16
142 143 1.080705 GTCCGACTCGAAGGTGGTG 60.081 63.158 0.00 0.00 0.00 4.17
143 144 2.261671 CCGACTCGAAGGTGGTGG 59.738 66.667 0.00 0.00 0.00 4.61
144 145 2.571216 CCGACTCGAAGGTGGTGGT 61.571 63.158 0.00 0.00 0.00 4.16
145 146 1.080705 CGACTCGAAGGTGGTGGTC 60.081 63.158 0.00 0.00 0.00 4.02
146 147 1.080705 GACTCGAAGGTGGTGGTCG 60.081 63.158 0.00 0.00 36.12 4.79
147 148 1.521450 GACTCGAAGGTGGTGGTCGA 61.521 60.000 0.00 0.00 41.22 4.20
148 149 3.362262 TCGAAGGTGGTGGTCGAG 58.638 61.111 0.00 0.00 38.78 4.04
149 150 2.261671 CGAAGGTGGTGGTCGAGG 59.738 66.667 0.00 0.00 36.92 4.63
150 151 2.273179 CGAAGGTGGTGGTCGAGGA 61.273 63.158 0.00 0.00 36.92 3.71
151 152 1.292541 GAAGGTGGTGGTCGAGGAC 59.707 63.158 0.00 0.00 0.00 3.85
152 153 1.458777 AAGGTGGTGGTCGAGGACA 60.459 57.895 0.00 0.00 33.68 4.02
153 154 0.836400 AAGGTGGTGGTCGAGGACAT 60.836 55.000 0.00 0.00 33.68 3.06
154 155 1.218316 GGTGGTGGTCGAGGACATC 59.782 63.158 0.00 0.00 33.68 3.06
155 156 1.218316 GTGGTGGTCGAGGACATCC 59.782 63.158 0.00 0.00 33.68 3.51
156 157 2.348104 TGGTGGTCGAGGACATCCG 61.348 63.158 0.00 0.00 42.08 4.18
157 158 2.050350 GGTGGTCGAGGACATCCGA 61.050 63.158 0.00 0.00 42.08 4.55
158 159 1.433879 GTGGTCGAGGACATCCGAG 59.566 63.158 0.00 0.00 42.08 4.63
159 160 2.413765 GGTCGAGGACATCCGAGC 59.586 66.667 0.00 0.00 44.14 5.03
160 161 2.413765 GTCGAGGACATCCGAGCC 59.586 66.667 0.00 0.00 42.08 4.70
161 162 2.044352 TCGAGGACATCCGAGCCA 60.044 61.111 0.00 0.00 42.08 4.75
162 163 1.680989 TCGAGGACATCCGAGCCAA 60.681 57.895 0.00 0.00 42.08 4.52
163 164 1.519455 CGAGGACATCCGAGCCAAC 60.519 63.158 0.00 0.00 42.08 3.77
164 165 1.596934 GAGGACATCCGAGCCAACA 59.403 57.895 0.00 0.00 42.08 3.33
165 166 0.036388 GAGGACATCCGAGCCAACAA 60.036 55.000 0.00 0.00 42.08 2.83
166 167 0.620556 AGGACATCCGAGCCAACAAT 59.379 50.000 0.00 0.00 42.08 2.71
167 168 1.017387 GGACATCCGAGCCAACAATC 58.983 55.000 0.00 0.00 0.00 2.67
168 169 1.017387 GACATCCGAGCCAACAATCC 58.983 55.000 0.00 0.00 0.00 3.01
169 170 0.620556 ACATCCGAGCCAACAATCCT 59.379 50.000 0.00 0.00 0.00 3.24
170 171 1.837439 ACATCCGAGCCAACAATCCTA 59.163 47.619 0.00 0.00 0.00 2.94
171 172 2.213499 CATCCGAGCCAACAATCCTAC 58.787 52.381 0.00 0.00 0.00 3.18
172 173 1.271856 TCCGAGCCAACAATCCTACA 58.728 50.000 0.00 0.00 0.00 2.74
173 174 1.626321 TCCGAGCCAACAATCCTACAA 59.374 47.619 0.00 0.00 0.00 2.41
174 175 1.737793 CCGAGCCAACAATCCTACAAC 59.262 52.381 0.00 0.00 0.00 3.32
175 176 2.615493 CCGAGCCAACAATCCTACAACT 60.615 50.000 0.00 0.00 0.00 3.16
176 177 3.074412 CGAGCCAACAATCCTACAACTT 58.926 45.455 0.00 0.00 0.00 2.66
177 178 4.250464 CGAGCCAACAATCCTACAACTTA 58.750 43.478 0.00 0.00 0.00 2.24
178 179 4.876107 CGAGCCAACAATCCTACAACTTAT 59.124 41.667 0.00 0.00 0.00 1.73
179 180 5.220662 CGAGCCAACAATCCTACAACTTATG 60.221 44.000 0.00 0.00 0.00 1.90
180 181 4.949856 AGCCAACAATCCTACAACTTATGG 59.050 41.667 0.00 0.00 0.00 2.74
181 182 4.097892 GCCAACAATCCTACAACTTATGGG 59.902 45.833 0.00 0.00 0.00 4.00
182 183 4.644685 CCAACAATCCTACAACTTATGGGG 59.355 45.833 0.00 0.00 0.00 4.96
183 184 3.898482 ACAATCCTACAACTTATGGGGC 58.102 45.455 0.00 0.00 0.00 5.80
184 185 2.878406 CAATCCTACAACTTATGGGGCG 59.122 50.000 0.00 0.00 0.00 6.13
185 186 1.868713 TCCTACAACTTATGGGGCGA 58.131 50.000 0.00 0.00 0.00 5.54
186 187 2.404559 TCCTACAACTTATGGGGCGAT 58.595 47.619 0.00 0.00 0.00 4.58
187 188 2.367567 TCCTACAACTTATGGGGCGATC 59.632 50.000 0.00 0.00 0.00 3.69
188 189 2.104111 CCTACAACTTATGGGGCGATCA 59.896 50.000 0.00 0.00 0.00 2.92
189 190 3.244561 CCTACAACTTATGGGGCGATCAT 60.245 47.826 0.00 0.00 0.00 2.45
190 191 4.020573 CCTACAACTTATGGGGCGATCATA 60.021 45.833 0.00 0.00 0.00 2.15
191 192 3.740115 ACAACTTATGGGGCGATCATAC 58.260 45.455 0.00 0.00 0.00 2.39
192 193 3.135712 ACAACTTATGGGGCGATCATACA 59.864 43.478 0.00 0.00 0.00 2.29
193 194 4.202461 ACAACTTATGGGGCGATCATACAT 60.202 41.667 0.00 0.00 0.00 2.29
194 195 3.942829 ACTTATGGGGCGATCATACATG 58.057 45.455 0.00 0.00 0.00 3.21
195 196 3.582647 ACTTATGGGGCGATCATACATGA 59.417 43.478 0.00 0.00 41.70 3.07
196 197 4.041567 ACTTATGGGGCGATCATACATGAA 59.958 41.667 0.00 0.00 40.69 2.57
197 198 3.507162 ATGGGGCGATCATACATGAAA 57.493 42.857 0.00 0.00 40.69 2.69
198 199 3.507162 TGGGGCGATCATACATGAAAT 57.493 42.857 0.00 0.00 40.69 2.17
199 200 4.632327 TGGGGCGATCATACATGAAATA 57.368 40.909 0.00 0.00 40.69 1.40
200 201 4.979335 TGGGGCGATCATACATGAAATAA 58.021 39.130 0.00 0.00 40.69 1.40
201 202 5.569355 TGGGGCGATCATACATGAAATAAT 58.431 37.500 0.00 0.00 40.69 1.28
202 203 6.716284 TGGGGCGATCATACATGAAATAATA 58.284 36.000 0.00 0.00 40.69 0.98
203 204 6.823182 TGGGGCGATCATACATGAAATAATAG 59.177 38.462 0.00 0.00 40.69 1.73
204 205 7.047891 GGGGCGATCATACATGAAATAATAGA 58.952 38.462 0.00 0.00 40.69 1.98
205 206 7.225538 GGGGCGATCATACATGAAATAATAGAG 59.774 40.741 0.00 0.00 40.69 2.43
206 207 7.254590 GGGCGATCATACATGAAATAATAGAGC 60.255 40.741 0.00 0.00 40.69 4.09
207 208 7.278646 GGCGATCATACATGAAATAATAGAGCA 59.721 37.037 0.00 0.00 40.69 4.26
208 209 8.824781 GCGATCATACATGAAATAATAGAGCAT 58.175 33.333 0.00 0.00 40.69 3.79
227 228 8.358582 AGAGCATAGATCAAATTTCCTTTTGT 57.641 30.769 0.00 0.00 37.73 2.83
228 229 8.248945 AGAGCATAGATCAAATTTCCTTTTGTG 58.751 33.333 0.00 0.00 37.73 3.33
229 230 7.899973 AGCATAGATCAAATTTCCTTTTGTGT 58.100 30.769 0.00 0.00 37.73 3.72
230 231 9.023962 AGCATAGATCAAATTTCCTTTTGTGTA 57.976 29.630 0.00 0.00 37.73 2.90
231 232 9.638239 GCATAGATCAAATTTCCTTTTGTGTAA 57.362 29.630 0.00 0.00 37.73 2.41
239 240 9.824534 CAAATTTCCTTTTGTGTAATTTATGCC 57.175 29.630 0.00 0.00 32.99 4.40
240 241 9.566432 AAATTTCCTTTTGTGTAATTTATGCCA 57.434 25.926 0.00 0.00 29.39 4.92
241 242 9.737844 AATTTCCTTTTGTGTAATTTATGCCAT 57.262 25.926 0.00 0.00 0.00 4.40
242 243 8.545229 TTTCCTTTTGTGTAATTTATGCCATG 57.455 30.769 0.00 0.00 0.00 3.66
243 244 7.473735 TCCTTTTGTGTAATTTATGCCATGA 57.526 32.000 0.00 0.00 0.00 3.07
244 245 7.901029 TCCTTTTGTGTAATTTATGCCATGAA 58.099 30.769 0.00 0.00 0.00 2.57
245 246 8.538701 TCCTTTTGTGTAATTTATGCCATGAAT 58.461 29.630 0.00 0.00 0.00 2.57
246 247 9.165035 CCTTTTGTGTAATTTATGCCATGAATT 57.835 29.630 11.56 11.56 33.68 2.17
250 251 9.814899 TTGTGTAATTTATGCCATGAATTTAGG 57.185 29.630 12.01 0.00 31.85 2.69
251 252 9.194972 TGTGTAATTTATGCCATGAATTTAGGA 57.805 29.630 12.01 0.00 31.85 2.94
252 253 9.683069 GTGTAATTTATGCCATGAATTTAGGAG 57.317 33.333 12.01 0.00 31.85 3.69
253 254 8.359642 TGTAATTTATGCCATGAATTTAGGAGC 58.640 33.333 12.01 0.01 31.85 4.70
254 255 7.607615 AATTTATGCCATGAATTTAGGAGCT 57.392 32.000 1.86 0.00 0.00 4.09
255 256 6.639632 TTTATGCCATGAATTTAGGAGCTC 57.360 37.500 4.71 4.71 0.00 4.09
256 257 2.564771 TGCCATGAATTTAGGAGCTCG 58.435 47.619 7.83 0.00 0.00 5.03
257 258 2.170397 TGCCATGAATTTAGGAGCTCGA 59.830 45.455 7.83 0.00 0.00 4.04
258 259 3.206150 GCCATGAATTTAGGAGCTCGAA 58.794 45.455 7.83 1.24 0.00 3.71
259 260 3.817647 GCCATGAATTTAGGAGCTCGAAT 59.182 43.478 7.83 5.28 0.00 3.34
260 261 4.997395 GCCATGAATTTAGGAGCTCGAATA 59.003 41.667 7.83 0.00 0.00 1.75
261 262 5.645497 GCCATGAATTTAGGAGCTCGAATAT 59.355 40.000 7.83 0.00 0.00 1.28
262 263 6.183360 GCCATGAATTTAGGAGCTCGAATATC 60.183 42.308 7.83 6.61 0.00 1.63
263 264 6.035435 CCATGAATTTAGGAGCTCGAATATCG 59.965 42.308 7.83 0.00 42.10 2.92
275 276 3.116300 TCGAATATCGAAGCTCACAAGC 58.884 45.455 0.00 0.00 46.90 4.01
283 284 2.774774 GCTCACAAGCTCGCGAAG 59.225 61.111 11.33 3.46 45.55 3.79
296 297 3.003478 CGAAGCACGCGTTATCCC 58.997 61.111 10.22 0.00 34.51 3.85
297 298 1.518572 CGAAGCACGCGTTATCCCT 60.519 57.895 10.22 0.00 34.51 4.20
298 299 1.082117 CGAAGCACGCGTTATCCCTT 61.082 55.000 10.22 7.30 34.51 3.95
299 300 0.651031 GAAGCACGCGTTATCCCTTC 59.349 55.000 10.22 12.67 0.00 3.46
300 301 0.743345 AAGCACGCGTTATCCCTTCC 60.743 55.000 10.22 0.00 0.00 3.46
301 302 2.522638 GCACGCGTTATCCCTTCCG 61.523 63.158 10.22 0.00 0.00 4.30
302 303 1.881252 CACGCGTTATCCCTTCCGG 60.881 63.158 10.22 0.00 0.00 5.14
303 304 2.965462 CGCGTTATCCCTTCCGGC 60.965 66.667 0.00 0.00 0.00 6.13
304 305 2.504519 GCGTTATCCCTTCCGGCT 59.495 61.111 0.00 0.00 0.00 5.52
305 306 1.887707 GCGTTATCCCTTCCGGCTG 60.888 63.158 0.00 0.00 0.00 4.85
306 307 1.227556 CGTTATCCCTTCCGGCTGG 60.228 63.158 4.71 4.71 0.00 4.85
307 308 1.526225 GTTATCCCTTCCGGCTGGC 60.526 63.158 6.73 0.00 34.14 4.85
308 309 2.752807 TTATCCCTTCCGGCTGGCC 61.753 63.158 6.73 0.00 34.14 5.36
318 319 2.568090 GGCTGGCCGACATGTTTG 59.432 61.111 0.00 0.00 0.00 2.93
319 320 2.568090 GCTGGCCGACATGTTTGG 59.432 61.111 12.46 12.46 0.00 3.28
320 321 2.268076 GCTGGCCGACATGTTTGGT 61.268 57.895 16.67 0.00 0.00 3.67
321 322 1.805428 GCTGGCCGACATGTTTGGTT 61.805 55.000 16.67 0.00 0.00 3.67
322 323 0.039256 CTGGCCGACATGTTTGGTTG 60.039 55.000 16.67 6.40 0.00 3.77
323 324 1.288752 GGCCGACATGTTTGGTTGG 59.711 57.895 16.67 6.81 41.87 3.77
324 325 1.288752 GCCGACATGTTTGGTTGGG 59.711 57.895 16.67 4.91 39.74 4.12
325 326 1.175983 GCCGACATGTTTGGTTGGGA 61.176 55.000 16.67 0.00 39.74 4.37
326 327 0.596082 CCGACATGTTTGGTTGGGAC 59.404 55.000 0.00 0.00 36.35 4.46
327 328 1.313772 CGACATGTTTGGTTGGGACA 58.686 50.000 0.00 0.00 0.00 4.02
328 329 1.266718 CGACATGTTTGGTTGGGACAG 59.733 52.381 0.00 0.00 42.39 3.51
329 330 1.000274 GACATGTTTGGTTGGGACAGC 60.000 52.381 0.00 0.00 42.39 4.40
340 341 4.131088 GGACAGCCGGACGGACTC 62.131 72.222 15.99 4.70 37.50 3.36
341 342 3.063084 GACAGCCGGACGGACTCT 61.063 66.667 15.99 0.00 37.50 3.24
342 343 3.053849 GACAGCCGGACGGACTCTC 62.054 68.421 15.99 5.00 37.50 3.20
343 344 2.752238 CAGCCGGACGGACTCTCT 60.752 66.667 15.99 0.00 37.50 3.10
344 345 2.035940 AGCCGGACGGACTCTCTT 59.964 61.111 15.99 0.00 37.50 2.85
345 346 1.606889 AGCCGGACGGACTCTCTTT 60.607 57.895 15.99 0.00 37.50 2.52
346 347 1.153804 GCCGGACGGACTCTCTTTC 60.154 63.158 15.99 0.00 37.50 2.62
347 348 1.136984 CCGGACGGACTCTCTTTCG 59.863 63.158 4.40 0.00 37.50 3.46
348 349 1.584380 CCGGACGGACTCTCTTTCGT 61.584 60.000 4.40 0.00 38.62 3.85
350 351 3.698678 GACGGACTCTCTTTCGTCC 57.301 57.895 0.00 0.00 44.02 4.79
356 357 4.451629 GGACTCTCTTTCGTCCATGTAA 57.548 45.455 3.72 0.00 46.98 2.41
357 358 4.817517 GGACTCTCTTTCGTCCATGTAAA 58.182 43.478 3.72 0.00 46.98 2.01
358 359 4.626172 GGACTCTCTTTCGTCCATGTAAAC 59.374 45.833 3.72 0.00 46.98 2.01
359 360 5.209818 ACTCTCTTTCGTCCATGTAAACA 57.790 39.130 0.00 0.00 0.00 2.83
360 361 5.794894 ACTCTCTTTCGTCCATGTAAACAT 58.205 37.500 0.00 0.00 36.96 2.71
361 362 6.231211 ACTCTCTTTCGTCCATGTAAACATT 58.769 36.000 0.00 0.00 33.61 2.71
362 363 6.147821 ACTCTCTTTCGTCCATGTAAACATTG 59.852 38.462 0.00 0.00 33.61 2.82
363 364 5.995282 TCTCTTTCGTCCATGTAAACATTGT 59.005 36.000 0.00 0.00 33.61 2.71
364 365 5.996219 TCTTTCGTCCATGTAAACATTGTG 58.004 37.500 0.00 0.00 33.61 3.33
365 366 5.760743 TCTTTCGTCCATGTAAACATTGTGA 59.239 36.000 0.00 0.00 33.61 3.58
366 367 5.351233 TTCGTCCATGTAAACATTGTGAC 57.649 39.130 0.00 0.97 33.61 3.67
367 368 3.430556 TCGTCCATGTAAACATTGTGACG 59.569 43.478 21.65 21.65 33.61 4.35
368 369 3.185594 CGTCCATGTAAACATTGTGACGT 59.814 43.478 20.47 0.00 33.61 4.34
369 370 4.386350 CGTCCATGTAAACATTGTGACGTA 59.614 41.667 20.47 0.00 33.61 3.57
370 371 5.107414 CGTCCATGTAAACATTGTGACGTAA 60.107 40.000 20.47 0.00 33.61 3.18
371 372 6.401688 CGTCCATGTAAACATTGTGACGTAAT 60.402 38.462 20.47 0.00 33.61 1.89
372 373 7.201453 CGTCCATGTAAACATTGTGACGTAATA 60.201 37.037 20.47 0.00 33.61 0.98
373 374 8.444715 GTCCATGTAAACATTGTGACGTAATAA 58.555 33.333 0.00 0.00 33.61 1.40
374 375 9.000486 TCCATGTAAACATTGTGACGTAATAAA 58.000 29.630 0.00 0.00 33.61 1.40
375 376 9.272901 CCATGTAAACATTGTGACGTAATAAAG 57.727 33.333 0.00 0.00 33.61 1.85
376 377 8.785101 CATGTAAACATTGTGACGTAATAAAGC 58.215 33.333 0.00 0.00 33.61 3.51
377 378 8.090250 TGTAAACATTGTGACGTAATAAAGCT 57.910 30.769 0.00 0.00 0.00 3.74
378 379 8.561212 TGTAAACATTGTGACGTAATAAAGCTT 58.439 29.630 0.00 0.00 0.00 3.74
379 380 9.047871 GTAAACATTGTGACGTAATAAAGCTTC 57.952 33.333 0.00 0.00 0.00 3.86
380 381 5.854157 ACATTGTGACGTAATAAAGCTTCG 58.146 37.500 0.00 0.38 0.00 3.79
381 382 4.914312 TTGTGACGTAATAAAGCTTCGG 57.086 40.909 0.00 0.00 0.00 4.30
382 383 4.177165 TGTGACGTAATAAAGCTTCGGA 57.823 40.909 0.00 0.00 0.00 4.55
383 384 4.171005 TGTGACGTAATAAAGCTTCGGAG 58.829 43.478 0.00 0.00 0.00 4.63
384 385 4.171754 GTGACGTAATAAAGCTTCGGAGT 58.828 43.478 0.00 0.00 0.00 3.85
385 386 4.624452 GTGACGTAATAAAGCTTCGGAGTT 59.376 41.667 0.00 0.00 0.00 3.01
386 387 5.119743 GTGACGTAATAAAGCTTCGGAGTTT 59.880 40.000 0.00 0.00 0.00 2.66
387 388 5.119588 TGACGTAATAAAGCTTCGGAGTTTG 59.880 40.000 0.00 0.00 0.00 2.93
388 389 4.142966 ACGTAATAAAGCTTCGGAGTTTGC 60.143 41.667 0.00 0.00 0.00 3.68
389 390 3.850122 AATAAAGCTTCGGAGTTTGCC 57.150 42.857 0.00 0.00 0.00 4.52
390 391 2.561478 TAAAGCTTCGGAGTTTGCCT 57.439 45.000 0.00 0.00 0.00 4.75
391 392 2.561478 AAAGCTTCGGAGTTTGCCTA 57.439 45.000 0.00 0.00 0.00 3.93
392 393 2.561478 AAGCTTCGGAGTTTGCCTAA 57.439 45.000 0.00 0.00 0.00 2.69
393 394 2.561478 AGCTTCGGAGTTTGCCTAAA 57.439 45.000 0.00 0.00 0.00 1.85
394 395 2.858745 AGCTTCGGAGTTTGCCTAAAA 58.141 42.857 0.00 0.00 0.00 1.52
395 396 3.219281 AGCTTCGGAGTTTGCCTAAAAA 58.781 40.909 0.00 0.00 0.00 1.94
414 415 2.134201 AAAAGCAAGTTAGCAACCGC 57.866 45.000 0.00 0.00 36.85 5.68
415 416 0.313987 AAAGCAAGTTAGCAACCGCC 59.686 50.000 0.00 0.00 39.83 6.13
416 417 1.852067 AAGCAAGTTAGCAACCGCCG 61.852 55.000 0.00 0.00 39.83 6.46
417 418 2.175811 CAAGTTAGCAACCGCCGC 59.824 61.111 0.00 0.00 39.83 6.53
418 419 3.053896 AAGTTAGCAACCGCCGCC 61.054 61.111 0.00 0.00 39.83 6.13
421 422 4.460683 TTAGCAACCGCCGCCGAT 62.461 61.111 0.00 0.00 39.83 4.18
422 423 3.961838 TTAGCAACCGCCGCCGATT 62.962 57.895 0.00 0.00 39.83 3.34
423 424 2.575125 TTAGCAACCGCCGCCGATTA 62.575 55.000 0.00 0.00 39.83 1.75
424 425 2.575125 TAGCAACCGCCGCCGATTAA 62.575 55.000 0.00 0.00 39.83 1.40
425 426 2.707039 CAACCGCCGCCGATTAAG 59.293 61.111 0.00 0.00 36.29 1.85
426 427 1.812093 CAACCGCCGCCGATTAAGA 60.812 57.895 0.00 0.00 36.29 2.10
427 428 1.520787 AACCGCCGCCGATTAAGAG 60.521 57.895 0.00 0.00 36.29 2.85
428 429 1.952102 AACCGCCGCCGATTAAGAGA 61.952 55.000 0.00 0.00 36.29 3.10
429 430 1.227147 CCGCCGCCGATTAAGAGAA 60.227 57.895 0.00 0.00 36.29 2.87
430 431 1.215655 CCGCCGCCGATTAAGAGAAG 61.216 60.000 0.00 0.00 36.29 2.85
431 432 1.822250 CGCCGCCGATTAAGAGAAGC 61.822 60.000 0.00 0.00 36.29 3.86
432 433 0.810031 GCCGCCGATTAAGAGAAGCA 60.810 55.000 0.00 0.00 0.00 3.91
433 434 1.871080 CCGCCGATTAAGAGAAGCAT 58.129 50.000 0.00 0.00 0.00 3.79
434 435 2.866460 GCCGCCGATTAAGAGAAGCATA 60.866 50.000 0.00 0.00 0.00 3.14
435 436 2.989840 CCGCCGATTAAGAGAAGCATAG 59.010 50.000 0.00 0.00 0.00 2.23
436 437 3.305403 CCGCCGATTAAGAGAAGCATAGA 60.305 47.826 0.00 0.00 0.00 1.98
437 438 4.299155 CGCCGATTAAGAGAAGCATAGAA 58.701 43.478 0.00 0.00 0.00 2.10
438 439 4.926238 CGCCGATTAAGAGAAGCATAGAAT 59.074 41.667 0.00 0.00 0.00 2.40
439 440 5.406780 CGCCGATTAAGAGAAGCATAGAATT 59.593 40.000 0.00 0.00 0.00 2.17
440 441 6.597614 GCCGATTAAGAGAAGCATAGAATTG 58.402 40.000 0.00 0.00 0.00 2.32
441 442 6.425114 GCCGATTAAGAGAAGCATAGAATTGA 59.575 38.462 0.00 0.00 0.00 2.57
442 443 7.041780 GCCGATTAAGAGAAGCATAGAATTGAA 60.042 37.037 0.00 0.00 0.00 2.69
443 444 8.494347 CCGATTAAGAGAAGCATAGAATTGAAG 58.506 37.037 0.00 0.00 0.00 3.02
444 445 8.494347 CGATTAAGAGAAGCATAGAATTGAAGG 58.506 37.037 0.00 0.00 0.00 3.46
445 446 9.553064 GATTAAGAGAAGCATAGAATTGAAGGA 57.447 33.333 0.00 0.00 0.00 3.36
447 448 9.553064 TTAAGAGAAGCATAGAATTGAAGGATC 57.447 33.333 0.00 0.00 0.00 3.36
448 449 7.377696 AGAGAAGCATAGAATTGAAGGATCT 57.622 36.000 0.00 0.00 0.00 2.75
449 450 8.489676 AGAGAAGCATAGAATTGAAGGATCTA 57.510 34.615 0.00 0.00 0.00 1.98
450 451 8.932610 AGAGAAGCATAGAATTGAAGGATCTAA 58.067 33.333 0.00 0.00 0.00 2.10
451 452 8.900983 AGAAGCATAGAATTGAAGGATCTAAC 57.099 34.615 0.00 0.00 0.00 2.34
452 453 7.936301 AGAAGCATAGAATTGAAGGATCTAACC 59.064 37.037 0.00 0.00 0.00 2.85
453 454 7.385894 AGCATAGAATTGAAGGATCTAACCT 57.614 36.000 0.00 0.00 42.69 3.50
454 455 7.222872 AGCATAGAATTGAAGGATCTAACCTG 58.777 38.462 0.00 0.00 40.49 4.00
455 456 7.071698 AGCATAGAATTGAAGGATCTAACCTGA 59.928 37.037 0.00 0.00 40.49 3.86
456 457 7.716998 GCATAGAATTGAAGGATCTAACCTGAA 59.283 37.037 0.00 0.00 40.49 3.02
457 458 9.270640 CATAGAATTGAAGGATCTAACCTGAAG 57.729 37.037 0.00 0.00 40.49 3.02
458 459 7.502060 AGAATTGAAGGATCTAACCTGAAGA 57.498 36.000 0.00 0.00 40.49 2.87
459 460 7.334858 AGAATTGAAGGATCTAACCTGAAGAC 58.665 38.462 0.00 0.00 40.49 3.01
460 461 6.627087 ATTGAAGGATCTAACCTGAAGACA 57.373 37.500 0.00 0.00 40.49 3.41
461 462 5.407407 TGAAGGATCTAACCTGAAGACAC 57.593 43.478 0.00 0.00 40.49 3.67
462 463 4.838423 TGAAGGATCTAACCTGAAGACACA 59.162 41.667 0.00 0.00 40.49 3.72
463 464 4.810191 AGGATCTAACCTGAAGACACAC 57.190 45.455 0.00 0.00 39.01 3.82
464 465 4.160329 AGGATCTAACCTGAAGACACACA 58.840 43.478 0.00 0.00 39.01 3.72
465 466 4.593206 AGGATCTAACCTGAAGACACACAA 59.407 41.667 0.00 0.00 39.01 3.33
466 467 5.071788 AGGATCTAACCTGAAGACACACAAA 59.928 40.000 0.00 0.00 39.01 2.83
467 468 5.940470 GGATCTAACCTGAAGACACACAAAT 59.060 40.000 0.00 0.00 0.00 2.32
468 469 6.431234 GGATCTAACCTGAAGACACACAAATT 59.569 38.462 0.00 0.00 0.00 1.82
469 470 6.861065 TCTAACCTGAAGACACACAAATTC 57.139 37.500 0.00 0.00 0.00 2.17
470 471 6.353323 TCTAACCTGAAGACACACAAATTCA 58.647 36.000 0.00 0.00 0.00 2.57
471 472 5.505173 AACCTGAAGACACACAAATTCAG 57.495 39.130 6.78 6.78 45.26 3.02
476 477 6.940831 TGAAGACACACAAATTCAGATGAA 57.059 33.333 0.00 0.00 38.56 2.57
477 478 6.728200 TGAAGACACACAAATTCAGATGAAC 58.272 36.000 0.00 0.00 36.80 3.18
478 479 5.348418 AGACACACAAATTCAGATGAACG 57.652 39.130 0.00 0.00 36.80 3.95
479 480 5.056480 AGACACACAAATTCAGATGAACGA 58.944 37.500 0.00 0.00 36.80 3.85
480 481 5.702670 AGACACACAAATTCAGATGAACGAT 59.297 36.000 0.00 0.00 36.80 3.73
481 482 5.692814 ACACACAAATTCAGATGAACGATG 58.307 37.500 0.00 0.76 36.80 3.84
482 483 5.469760 ACACACAAATTCAGATGAACGATGA 59.530 36.000 0.00 0.00 36.80 2.92
483 484 6.149973 ACACACAAATTCAGATGAACGATGAT 59.850 34.615 0.00 0.00 36.80 2.45
484 485 6.468000 CACACAAATTCAGATGAACGATGATG 59.532 38.462 0.00 2.75 36.80 3.07
485 486 5.969435 CACAAATTCAGATGAACGATGATGG 59.031 40.000 0.00 0.00 36.80 3.51
486 487 4.825546 AATTCAGATGAACGATGATGGC 57.174 40.909 0.00 0.00 36.80 4.40
487 488 2.245159 TCAGATGAACGATGATGGCC 57.755 50.000 0.00 0.00 0.00 5.36
488 489 1.764723 TCAGATGAACGATGATGGCCT 59.235 47.619 3.32 0.00 0.00 5.19
489 490 1.871676 CAGATGAACGATGATGGCCTG 59.128 52.381 3.32 0.00 0.00 4.85
490 491 1.202734 AGATGAACGATGATGGCCTGG 60.203 52.381 3.32 0.00 0.00 4.45
491 492 0.839277 ATGAACGATGATGGCCTGGA 59.161 50.000 3.32 0.00 0.00 3.86
492 493 0.617935 TGAACGATGATGGCCTGGAA 59.382 50.000 3.32 0.00 0.00 3.53
493 494 1.212688 TGAACGATGATGGCCTGGAAT 59.787 47.619 3.32 0.00 0.00 3.01
494 495 2.301346 GAACGATGATGGCCTGGAATT 58.699 47.619 3.32 0.00 0.00 2.17
495 496 3.118075 TGAACGATGATGGCCTGGAATTA 60.118 43.478 3.32 0.00 0.00 1.40
496 497 3.576078 ACGATGATGGCCTGGAATTAA 57.424 42.857 3.32 0.00 0.00 1.40
497 498 3.897239 ACGATGATGGCCTGGAATTAAA 58.103 40.909 3.32 0.00 0.00 1.52
498 499 4.277476 ACGATGATGGCCTGGAATTAAAA 58.723 39.130 3.32 0.00 0.00 1.52
499 500 4.097892 ACGATGATGGCCTGGAATTAAAAC 59.902 41.667 3.32 0.00 0.00 2.43
500 501 4.499696 CGATGATGGCCTGGAATTAAAACC 60.500 45.833 3.32 0.00 0.00 3.27
501 502 2.757868 TGATGGCCTGGAATTAAAACCG 59.242 45.455 3.32 0.00 0.00 4.44
502 503 2.588464 TGGCCTGGAATTAAAACCGA 57.412 45.000 3.32 0.00 0.00 4.69
503 504 2.442413 TGGCCTGGAATTAAAACCGAG 58.558 47.619 3.32 0.00 0.00 4.63
504 505 1.134367 GGCCTGGAATTAAAACCGAGC 59.866 52.381 0.00 0.00 0.00 5.03
505 506 1.134367 GCCTGGAATTAAAACCGAGCC 59.866 52.381 0.00 0.00 0.00 4.70
506 507 2.442413 CCTGGAATTAAAACCGAGCCA 58.558 47.619 0.00 0.00 0.00 4.75
512 513 4.482386 GAATTAAAACCGAGCCAAAGACC 58.518 43.478 0.00 0.00 0.00 3.85
513 514 2.642154 TAAAACCGAGCCAAAGACCA 57.358 45.000 0.00 0.00 0.00 4.02
525 526 3.276857 CCAAAGACCAGATCCATCACAG 58.723 50.000 0.00 0.00 0.00 3.66
527 528 4.080919 CCAAAGACCAGATCCATCACAGTA 60.081 45.833 0.00 0.00 0.00 2.74
537 538 7.358066 CAGATCCATCACAGTAATGTATTTGC 58.642 38.462 0.00 0.00 0.00 3.68
547 548 8.071967 CACAGTAATGTATTTGCTATGACCATG 58.928 37.037 0.00 0.00 26.84 3.66
548 549 7.080099 CAGTAATGTATTTGCTATGACCATGC 58.920 38.462 0.00 0.00 0.00 4.06
549 550 6.772233 AGTAATGTATTTGCTATGACCATGCA 59.228 34.615 0.00 0.00 34.69 3.96
550 551 6.659745 AATGTATTTGCTATGACCATGCAT 57.340 33.333 0.00 0.00 36.55 3.96
551 552 5.694231 TGTATTTGCTATGACCATGCATC 57.306 39.130 0.00 0.00 36.55 3.91
553 554 4.579454 ATTTGCTATGACCATGCATCAC 57.421 40.909 0.00 0.00 36.55 3.06
554 555 2.713863 TGCTATGACCATGCATCACA 57.286 45.000 0.00 0.00 0.00 3.58
555 556 2.567985 TGCTATGACCATGCATCACAG 58.432 47.619 0.00 0.00 0.00 3.66
556 557 2.171027 TGCTATGACCATGCATCACAGA 59.829 45.455 0.00 0.00 0.00 3.41
557 558 3.208594 GCTATGACCATGCATCACAGAA 58.791 45.455 0.00 0.00 0.00 3.02
558 559 3.250280 GCTATGACCATGCATCACAGAAG 59.750 47.826 0.00 1.43 0.00 2.85
559 560 1.456296 TGACCATGCATCACAGAAGC 58.544 50.000 0.00 0.00 0.00 3.86
560 561 1.271488 TGACCATGCATCACAGAAGCA 60.271 47.619 0.00 0.00 40.45 3.91
611 612 2.289133 GCCGGGTCTCTTTATCATCTCC 60.289 54.545 2.18 0.00 0.00 3.71
613 614 2.608261 CGGGTCTCTTTATCATCTCCGC 60.608 54.545 0.00 0.00 0.00 5.54
614 615 2.608261 GGGTCTCTTTATCATCTCCGCG 60.608 54.545 0.00 0.00 0.00 6.46
633 634 1.759445 CGGTCCTCTGATCACATCCTT 59.241 52.381 0.00 0.00 0.00 3.36
709 710 2.493278 CCCCAAGTTGTTGATCACATCC 59.507 50.000 0.00 0.00 35.46 3.51
813 827 4.032900 CCCAAAACGATTAGATCAGTCACG 59.967 45.833 0.00 0.00 0.00 4.35
821 835 2.086054 AGATCAGTCACGTGCTTTCC 57.914 50.000 11.67 3.02 0.00 3.13
828 842 0.179059 TCACGTGCTTTCCTCTGCAA 60.179 50.000 11.67 0.00 41.10 4.08
905 936 3.615351 GCTAAAGAGAGTGTGACCAGTCC 60.615 52.174 0.00 0.00 41.22 3.85
908 939 2.175202 AGAGAGTGTGACCAGTCCATC 58.825 52.381 0.00 0.00 41.22 3.51
917 1076 3.570125 GTGACCAGTCCATCGATCAGATA 59.430 47.826 0.00 0.00 37.52 1.98
928 1087 6.210185 TCCATCGATCAGATAAGTCACATGAT 59.790 38.462 0.00 0.00 37.52 2.45
947 1157 2.366153 TTTCTTCTGCCACCCACCCC 62.366 60.000 0.00 0.00 0.00 4.95
974 1185 3.257393 CTTCATCCGTTGTTCAGGAGAG 58.743 50.000 0.00 0.00 40.26 3.20
1039 1259 0.327591 CTTCCTCCTGCTTGCCTTCT 59.672 55.000 0.00 0.00 0.00 2.85
1230 1555 1.414181 CAGGCCATTACCGTGATCTCT 59.586 52.381 5.01 0.00 33.69 3.10
1433 1869 2.890766 GCCAGGAAGGTCCCAACGA 61.891 63.158 0.00 0.00 37.19 3.85
1611 2076 1.202405 GCACCGCCATTATTTCCCTTG 60.202 52.381 0.00 0.00 0.00 3.61
1612 2077 2.374184 CACCGCCATTATTTCCCTTGA 58.626 47.619 0.00 0.00 0.00 3.02
1623 2088 2.930826 TTCCCTTGAGCTTCGTTCTT 57.069 45.000 0.00 0.00 0.00 2.52
1691 2157 3.074412 AGTCAGCGAGGTGGTTATTTTG 58.926 45.455 2.30 0.00 0.00 2.44
1699 2165 5.163884 GCGAGGTGGTTATTTTGTTACTCTC 60.164 44.000 0.00 0.00 0.00 3.20
1703 2169 8.392372 AGGTGGTTATTTTGTTACTCTCTTTC 57.608 34.615 0.00 0.00 0.00 2.62
1711 2192 5.485209 TTGTTACTCTCTTTCTTCTCCCC 57.515 43.478 0.00 0.00 0.00 4.81
1749 2232 1.135199 CAACCATGCATGTCTCCTTGC 60.135 52.381 24.58 0.00 41.00 4.01
1800 2286 2.938956 ACAAGCAGAAGTAGTTGCCT 57.061 45.000 0.00 0.00 41.17 4.75
1812 2298 5.034852 AGTAGTTGCCTTTGCCAAATTTT 57.965 34.783 0.00 0.00 36.33 1.82
1867 3939 3.247648 CCTTCTTGGCGGATTACATTACG 59.752 47.826 0.00 0.00 0.00 3.18
1871 3943 2.195096 TGGCGGATTACATTACGTTCG 58.805 47.619 0.00 0.00 0.00 3.95
1889 3961 6.278363 ACGTTCGGAAATATAGCTACAACAT 58.722 36.000 0.00 0.00 0.00 2.71
1921 3993 4.880696 TCATGATTTCGACACAATGCCATA 59.119 37.500 0.00 0.00 0.00 2.74
1956 4030 3.635510 AGGAATGCCCTCGTCCTC 58.364 61.111 0.00 0.00 43.31 3.71
2014 4125 2.514803 ACAAGACCACAAGCCATAACC 58.485 47.619 0.00 0.00 0.00 2.85
2066 4177 1.386525 TTCTAGTATTCGCGCCCCGT 61.387 55.000 0.00 0.00 38.35 5.28
2090 4201 7.173218 CGTGACAATAGGATAAAATGCCTACAT 59.827 37.037 0.00 0.00 39.43 2.29
2116 4227 2.043852 ACCTCCTCATCGACGCCT 60.044 61.111 0.00 0.00 0.00 5.52
2131 4242 2.927580 GCCTCGGACAACGGTCTCA 61.928 63.158 0.00 0.00 43.77 3.27
2140 4251 3.530910 AACGGTCTCAACCCTGGCG 62.531 63.158 0.00 0.00 43.21 5.69
2181 4292 4.572571 GGCGTGGGTGTGGTTCCA 62.573 66.667 0.00 0.00 0.00 3.53
2222 4334 3.026311 GTGTCGCGGTCGTCGTTT 61.026 61.111 6.13 0.00 41.72 3.60
2271 4383 2.518112 TTTGCCAGAAGGTGCGCA 60.518 55.556 5.66 5.66 37.19 6.09
2273 4385 3.772853 TTGCCAGAAGGTGCGCACT 62.773 57.895 36.84 21.22 33.61 4.40
2311 4425 0.833287 CCGGGAATGTCACATCCTCT 59.167 55.000 0.00 0.00 35.95 3.69
2321 4435 2.166459 GTCACATCCTCTCGTCCAATGA 59.834 50.000 0.00 0.00 0.00 2.57
2345 4459 4.520492 AGCTTCACGATGACCATTTTCTTT 59.480 37.500 0.00 0.00 0.00 2.52
2390 4504 2.045242 CCGGTCTCCGTCTCCTCA 60.045 66.667 7.40 0.00 46.80 3.86
2440 4554 2.747686 CCTGCCGTACCTGGTTGT 59.252 61.111 3.84 0.00 0.00 3.32
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.566824 GCCGATGCTCCCAGAAAAA 58.433 52.632 0.00 0.00 33.53 1.94
1 2 4.319133 GCCGATGCTCCCAGAAAA 57.681 55.556 0.00 0.00 33.53 2.29
11 12 1.284297 GCAAAAACCACAGCCGATGC 61.284 55.000 0.00 0.00 37.95 3.91
12 13 0.031857 TGCAAAAACCACAGCCGATG 59.968 50.000 0.00 0.00 0.00 3.84
13 14 0.314935 CTGCAAAAACCACAGCCGAT 59.685 50.000 0.00 0.00 0.00 4.18
14 15 1.732917 CTGCAAAAACCACAGCCGA 59.267 52.632 0.00 0.00 0.00 5.54
15 16 1.300080 CCTGCAAAAACCACAGCCG 60.300 57.895 0.00 0.00 0.00 5.52
16 17 0.463620 TTCCTGCAAAAACCACAGCC 59.536 50.000 0.00 0.00 0.00 4.85
17 18 2.531522 ATTCCTGCAAAAACCACAGC 57.468 45.000 0.00 0.00 0.00 4.40
18 19 3.809279 GGAAATTCCTGCAAAAACCACAG 59.191 43.478 4.46 0.00 32.53 3.66
19 20 3.739519 CGGAAATTCCTGCAAAAACCACA 60.740 43.478 10.64 0.00 33.30 4.17
20 21 2.799978 CGGAAATTCCTGCAAAAACCAC 59.200 45.455 10.64 0.00 33.30 4.16
21 22 2.695666 TCGGAAATTCCTGCAAAAACCA 59.304 40.909 10.64 0.00 33.30 3.67
22 23 3.378911 TCGGAAATTCCTGCAAAAACC 57.621 42.857 10.64 0.00 33.30 3.27
23 24 3.926527 GGATCGGAAATTCCTGCAAAAAC 59.073 43.478 10.64 0.00 33.30 2.43
24 25 3.366883 CGGATCGGAAATTCCTGCAAAAA 60.367 43.478 10.64 0.00 33.30 1.94
25 26 2.163412 CGGATCGGAAATTCCTGCAAAA 59.837 45.455 10.64 0.00 33.30 2.44
26 27 1.742831 CGGATCGGAAATTCCTGCAAA 59.257 47.619 10.64 0.00 33.30 3.68
27 28 1.378531 CGGATCGGAAATTCCTGCAA 58.621 50.000 10.64 0.00 33.30 4.08
28 29 3.079131 CGGATCGGAAATTCCTGCA 57.921 52.632 10.64 0.00 33.30 4.41
40 41 3.740128 CTCAAGGGTGGCCGGATCG 62.740 68.421 5.05 0.00 0.00 3.69
41 42 2.190578 CTCAAGGGTGGCCGGATC 59.809 66.667 5.05 0.00 0.00 3.36
42 43 2.610859 ACTCAAGGGTGGCCGGAT 60.611 61.111 5.05 0.00 0.00 4.18
43 44 3.636231 CACTCAAGGGTGGCCGGA 61.636 66.667 5.05 0.00 33.95 5.14
45 46 3.925630 ATGCACTCAAGGGTGGCCG 62.926 63.158 0.00 0.00 37.65 6.13
46 47 2.036256 ATGCACTCAAGGGTGGCC 59.964 61.111 0.00 0.00 37.65 5.36
47 48 2.345760 CCATGCACTCAAGGGTGGC 61.346 63.158 1.79 0.00 37.65 5.01
48 49 2.345760 GCCATGCACTCAAGGGTGG 61.346 63.158 1.79 0.00 37.65 4.61
49 50 2.693762 CGCCATGCACTCAAGGGTG 61.694 63.158 0.00 0.00 39.91 4.61
50 51 2.202236 ATCGCCATGCACTCAAGGGT 62.202 55.000 0.00 0.00 31.94 4.34
51 52 1.442526 GATCGCCATGCACTCAAGGG 61.443 60.000 0.00 0.00 31.94 3.95
52 53 0.745486 TGATCGCCATGCACTCAAGG 60.745 55.000 0.00 0.00 34.32 3.61
53 54 0.656259 CTGATCGCCATGCACTCAAG 59.344 55.000 0.00 0.00 0.00 3.02
54 55 0.745486 CCTGATCGCCATGCACTCAA 60.745 55.000 0.00 0.00 0.00 3.02
55 56 1.153309 CCTGATCGCCATGCACTCA 60.153 57.895 0.00 0.00 0.00 3.41
56 57 1.890979 CCCTGATCGCCATGCACTC 60.891 63.158 0.00 0.00 0.00 3.51
57 58 2.191375 CCCTGATCGCCATGCACT 59.809 61.111 0.00 0.00 0.00 4.40
58 59 1.890979 CTCCCTGATCGCCATGCAC 60.891 63.158 0.00 0.00 0.00 4.57
59 60 2.507452 CTCCCTGATCGCCATGCA 59.493 61.111 0.00 0.00 0.00 3.96
60 61 2.281345 CCTCCCTGATCGCCATGC 60.281 66.667 0.00 0.00 0.00 4.06
61 62 2.281345 GCCTCCCTGATCGCCATG 60.281 66.667 0.00 0.00 0.00 3.66
62 63 1.713005 AATGCCTCCCTGATCGCCAT 61.713 55.000 0.00 0.00 0.00 4.40
63 64 2.377810 AATGCCTCCCTGATCGCCA 61.378 57.895 0.00 0.00 0.00 5.69
64 65 1.895707 CAATGCCTCCCTGATCGCC 60.896 63.158 0.00 0.00 0.00 5.54
65 66 1.895707 CCAATGCCTCCCTGATCGC 60.896 63.158 0.00 0.00 0.00 4.58
66 67 1.895707 GCCAATGCCTCCCTGATCG 60.896 63.158 0.00 0.00 0.00 3.69
67 68 4.170947 GCCAATGCCTCCCTGATC 57.829 61.111 0.00 0.00 0.00 2.92
77 78 1.143183 CATCTGCAAGGGCCAATGC 59.857 57.895 22.92 22.92 42.86 3.56
78 79 0.458669 GTCATCTGCAAGGGCCAATG 59.541 55.000 6.18 5.52 40.13 2.82
79 80 0.685458 GGTCATCTGCAAGGGCCAAT 60.685 55.000 6.18 0.00 40.13 3.16
80 81 1.304381 GGTCATCTGCAAGGGCCAA 60.304 57.895 6.18 0.00 40.13 4.52
81 82 2.202236 GAGGTCATCTGCAAGGGCCA 62.202 60.000 6.18 0.00 40.13 5.36
82 83 1.452833 GAGGTCATCTGCAAGGGCC 60.453 63.158 0.00 0.00 40.13 5.80
83 84 0.322816 TTGAGGTCATCTGCAAGGGC 60.323 55.000 0.00 0.00 41.68 5.19
84 85 2.022195 CATTGAGGTCATCTGCAAGGG 58.978 52.381 0.00 0.00 0.00 3.95
85 86 2.719739 ACATTGAGGTCATCTGCAAGG 58.280 47.619 0.00 0.00 0.00 3.61
86 87 4.216902 TGAAACATTGAGGTCATCTGCAAG 59.783 41.667 0.00 0.00 0.00 4.01
87 88 4.143543 TGAAACATTGAGGTCATCTGCAA 58.856 39.130 0.00 0.00 0.00 4.08
88 89 3.753815 TGAAACATTGAGGTCATCTGCA 58.246 40.909 0.00 0.00 0.00 4.41
89 90 4.217118 AGTTGAAACATTGAGGTCATCTGC 59.783 41.667 0.00 0.00 0.00 4.26
90 91 5.954296 AGTTGAAACATTGAGGTCATCTG 57.046 39.130 0.00 0.00 0.00 2.90
91 92 8.321353 TGTATAGTTGAAACATTGAGGTCATCT 58.679 33.333 0.00 0.00 0.00 2.90
92 93 8.492673 TGTATAGTTGAAACATTGAGGTCATC 57.507 34.615 0.00 0.00 0.00 2.92
93 94 8.862325 TTGTATAGTTGAAACATTGAGGTCAT 57.138 30.769 0.00 0.00 0.00 3.06
94 95 7.936847 ACTTGTATAGTTGAAACATTGAGGTCA 59.063 33.333 0.00 0.00 31.29 4.02
95 96 8.230486 CACTTGTATAGTTGAAACATTGAGGTC 58.770 37.037 0.00 0.00 33.85 3.85
96 97 7.174946 CCACTTGTATAGTTGAAACATTGAGGT 59.825 37.037 0.00 0.00 33.85 3.85
97 98 7.530010 CCACTTGTATAGTTGAAACATTGAGG 58.470 38.462 0.00 0.00 33.85 3.86
98 99 7.023575 GCCACTTGTATAGTTGAAACATTGAG 58.976 38.462 0.00 0.00 33.85 3.02
99 100 6.348132 CGCCACTTGTATAGTTGAAACATTGA 60.348 38.462 0.00 0.00 33.85 2.57
100 101 5.794945 CGCCACTTGTATAGTTGAAACATTG 59.205 40.000 0.00 0.00 33.85 2.82
101 102 5.472137 ACGCCACTTGTATAGTTGAAACATT 59.528 36.000 0.00 0.00 33.85 2.71
102 103 5.001232 ACGCCACTTGTATAGTTGAAACAT 58.999 37.500 0.00 0.00 33.85 2.71
103 104 4.382291 ACGCCACTTGTATAGTTGAAACA 58.618 39.130 0.00 0.00 33.85 2.83
104 105 4.142966 GGACGCCACTTGTATAGTTGAAAC 60.143 45.833 0.00 0.00 33.85 2.78
105 106 3.998341 GGACGCCACTTGTATAGTTGAAA 59.002 43.478 0.00 0.00 33.85 2.69
106 107 3.592059 GGACGCCACTTGTATAGTTGAA 58.408 45.455 0.00 0.00 33.85 2.69
107 108 2.416296 CGGACGCCACTTGTATAGTTGA 60.416 50.000 0.00 0.00 33.85 3.18
108 109 1.924524 CGGACGCCACTTGTATAGTTG 59.075 52.381 0.00 0.00 33.85 3.16
109 110 1.820519 TCGGACGCCACTTGTATAGTT 59.179 47.619 0.00 0.00 33.85 2.24
110 111 1.133790 GTCGGACGCCACTTGTATAGT 59.866 52.381 0.00 0.00 37.68 2.12
111 112 1.404391 AGTCGGACGCCACTTGTATAG 59.596 52.381 1.89 0.00 0.00 1.31
112 113 1.402968 GAGTCGGACGCCACTTGTATA 59.597 52.381 1.89 0.00 0.00 1.47
113 114 0.172803 GAGTCGGACGCCACTTGTAT 59.827 55.000 1.89 0.00 0.00 2.29
114 115 1.582968 GAGTCGGACGCCACTTGTA 59.417 57.895 1.89 0.00 0.00 2.41
115 116 2.338984 GAGTCGGACGCCACTTGT 59.661 61.111 1.89 0.00 0.00 3.16
116 117 2.742710 TTCGAGTCGGACGCCACTTG 62.743 60.000 13.54 0.00 0.00 3.16
117 118 2.473664 CTTCGAGTCGGACGCCACTT 62.474 60.000 13.54 0.00 0.00 3.16
118 119 2.979197 CTTCGAGTCGGACGCCACT 61.979 63.158 13.54 0.00 0.00 4.00
119 120 2.504244 CTTCGAGTCGGACGCCAC 60.504 66.667 13.54 0.00 0.00 5.01
120 121 3.744719 CCTTCGAGTCGGACGCCA 61.745 66.667 13.54 0.00 0.00 5.69
121 122 3.745803 ACCTTCGAGTCGGACGCC 61.746 66.667 13.54 0.34 0.00 5.68
122 123 2.504244 CACCTTCGAGTCGGACGC 60.504 66.667 13.54 1.65 0.00 5.19
123 124 2.178521 CCACCTTCGAGTCGGACG 59.821 66.667 13.54 0.00 0.00 4.79
124 125 1.080705 CACCACCTTCGAGTCGGAC 60.081 63.158 13.54 0.00 0.00 4.79
125 126 2.273179 CCACCACCTTCGAGTCGGA 61.273 63.158 13.54 2.08 0.00 4.55
126 127 2.261671 CCACCACCTTCGAGTCGG 59.738 66.667 13.54 0.00 0.00 4.79
127 128 1.080705 GACCACCACCTTCGAGTCG 60.081 63.158 6.09 6.09 0.00 4.18
128 129 1.080705 CGACCACCACCTTCGAGTC 60.081 63.158 0.00 0.00 34.62 3.36
129 130 1.529948 TCGACCACCACCTTCGAGT 60.530 57.895 0.00 0.00 36.87 4.18
130 131 3.362262 TCGACCACCACCTTCGAG 58.638 61.111 0.00 0.00 36.87 4.04
131 132 2.273179 CCTCGACCACCACCTTCGA 61.273 63.158 0.00 0.00 39.38 3.71
132 133 2.261671 CCTCGACCACCACCTTCG 59.738 66.667 0.00 0.00 0.00 3.79
133 134 1.292541 GTCCTCGACCACCACCTTC 59.707 63.158 0.00 0.00 0.00 3.46
134 135 0.836400 ATGTCCTCGACCACCACCTT 60.836 55.000 0.00 0.00 0.00 3.50
135 136 1.229209 ATGTCCTCGACCACCACCT 60.229 57.895 0.00 0.00 0.00 4.00
136 137 1.218316 GATGTCCTCGACCACCACC 59.782 63.158 0.00 0.00 0.00 4.61
137 138 1.218316 GGATGTCCTCGACCACCAC 59.782 63.158 0.00 0.00 31.13 4.16
138 139 2.348104 CGGATGTCCTCGACCACCA 61.348 63.158 0.00 0.00 31.13 4.17
139 140 2.005960 CTCGGATGTCCTCGACCACC 62.006 65.000 0.00 0.00 0.00 4.61
140 141 1.433879 CTCGGATGTCCTCGACCAC 59.566 63.158 0.00 0.00 0.00 4.16
141 142 2.415608 GCTCGGATGTCCTCGACCA 61.416 63.158 0.00 0.00 0.00 4.02
142 143 2.413765 GCTCGGATGTCCTCGACC 59.586 66.667 0.00 0.00 0.00 4.79
143 144 1.945354 TTGGCTCGGATGTCCTCGAC 61.945 60.000 0.00 0.00 0.00 4.20
144 145 1.680989 TTGGCTCGGATGTCCTCGA 60.681 57.895 0.00 0.00 0.00 4.04
145 146 1.519455 GTTGGCTCGGATGTCCTCG 60.519 63.158 0.00 0.00 0.00 4.63
146 147 0.036388 TTGTTGGCTCGGATGTCCTC 60.036 55.000 0.00 0.00 0.00 3.71
147 148 0.620556 ATTGTTGGCTCGGATGTCCT 59.379 50.000 0.00 0.00 0.00 3.85
148 149 1.017387 GATTGTTGGCTCGGATGTCC 58.983 55.000 0.00 0.00 0.00 4.02
149 150 1.017387 GGATTGTTGGCTCGGATGTC 58.983 55.000 0.00 0.00 0.00 3.06
150 151 0.620556 AGGATTGTTGGCTCGGATGT 59.379 50.000 0.00 0.00 0.00 3.06
151 152 2.213499 GTAGGATTGTTGGCTCGGATG 58.787 52.381 0.00 0.00 0.00 3.51
152 153 1.837439 TGTAGGATTGTTGGCTCGGAT 59.163 47.619 0.00 0.00 0.00 4.18
153 154 1.271856 TGTAGGATTGTTGGCTCGGA 58.728 50.000 0.00 0.00 0.00 4.55
154 155 1.737793 GTTGTAGGATTGTTGGCTCGG 59.262 52.381 0.00 0.00 0.00 4.63
155 156 2.699954 AGTTGTAGGATTGTTGGCTCG 58.300 47.619 0.00 0.00 0.00 5.03
156 157 5.066505 CCATAAGTTGTAGGATTGTTGGCTC 59.933 44.000 0.00 0.00 0.00 4.70
157 158 4.949856 CCATAAGTTGTAGGATTGTTGGCT 59.050 41.667 0.00 0.00 0.00 4.75
158 159 4.097892 CCCATAAGTTGTAGGATTGTTGGC 59.902 45.833 0.00 0.00 0.00 4.52
159 160 4.644685 CCCCATAAGTTGTAGGATTGTTGG 59.355 45.833 0.00 0.00 0.00 3.77
160 161 4.097892 GCCCCATAAGTTGTAGGATTGTTG 59.902 45.833 0.00 0.00 0.00 3.33
161 162 4.278310 GCCCCATAAGTTGTAGGATTGTT 58.722 43.478 0.00 0.00 0.00 2.83
162 163 3.684413 CGCCCCATAAGTTGTAGGATTGT 60.684 47.826 0.00 0.00 0.00 2.71
163 164 2.878406 CGCCCCATAAGTTGTAGGATTG 59.122 50.000 0.00 0.00 0.00 2.67
164 165 2.775384 TCGCCCCATAAGTTGTAGGATT 59.225 45.455 0.00 0.00 0.00 3.01
165 166 2.404559 TCGCCCCATAAGTTGTAGGAT 58.595 47.619 0.00 0.00 0.00 3.24
166 167 1.868713 TCGCCCCATAAGTTGTAGGA 58.131 50.000 0.00 0.00 0.00 2.94
167 168 2.104111 TGATCGCCCCATAAGTTGTAGG 59.896 50.000 0.00 0.00 0.00 3.18
168 169 3.469008 TGATCGCCCCATAAGTTGTAG 57.531 47.619 0.00 0.00 0.00 2.74
169 170 4.345547 TGTATGATCGCCCCATAAGTTGTA 59.654 41.667 0.00 0.00 0.00 2.41
170 171 3.135712 TGTATGATCGCCCCATAAGTTGT 59.864 43.478 0.00 0.00 0.00 3.32
171 172 3.738982 TGTATGATCGCCCCATAAGTTG 58.261 45.455 0.00 0.00 0.00 3.16
172 173 4.041567 TCATGTATGATCGCCCCATAAGTT 59.958 41.667 0.00 0.00 0.00 2.66
173 174 3.582647 TCATGTATGATCGCCCCATAAGT 59.417 43.478 0.00 0.00 0.00 2.24
174 175 4.206477 TCATGTATGATCGCCCCATAAG 57.794 45.455 0.00 0.00 0.00 1.73
175 176 4.632327 TTCATGTATGATCGCCCCATAA 57.368 40.909 0.00 0.00 36.56 1.90
176 177 4.632327 TTTCATGTATGATCGCCCCATA 57.368 40.909 0.00 0.00 36.56 2.74
177 178 3.507162 TTTCATGTATGATCGCCCCAT 57.493 42.857 0.00 0.00 36.56 4.00
178 179 3.507162 ATTTCATGTATGATCGCCCCA 57.493 42.857 0.00 0.00 36.56 4.96
179 180 7.047891 TCTATTATTTCATGTATGATCGCCCC 58.952 38.462 0.00 0.00 36.56 5.80
180 181 7.254590 GCTCTATTATTTCATGTATGATCGCCC 60.255 40.741 0.00 0.00 36.56 6.13
181 182 7.278646 TGCTCTATTATTTCATGTATGATCGCC 59.721 37.037 0.00 0.00 36.56 5.54
182 183 8.189709 TGCTCTATTATTTCATGTATGATCGC 57.810 34.615 0.00 0.00 36.56 4.58
201 202 9.466497 ACAAAAGGAAATTTGATCTATGCTCTA 57.534 29.630 0.00 0.00 41.73 2.43
202 203 8.248945 CACAAAAGGAAATTTGATCTATGCTCT 58.751 33.333 0.00 0.00 41.73 4.09
203 204 8.031277 ACACAAAAGGAAATTTGATCTATGCTC 58.969 33.333 0.00 0.00 41.73 4.26
204 205 7.899973 ACACAAAAGGAAATTTGATCTATGCT 58.100 30.769 0.00 0.00 41.73 3.79
205 206 9.638239 TTACACAAAAGGAAATTTGATCTATGC 57.362 29.630 0.00 0.00 41.73 3.14
213 214 9.824534 GGCATAAATTACACAAAAGGAAATTTG 57.175 29.630 0.00 0.00 44.11 2.32
214 215 9.566432 TGGCATAAATTACACAAAAGGAAATTT 57.434 25.926 0.00 0.00 34.89 1.82
215 216 9.737844 ATGGCATAAATTACACAAAAGGAAATT 57.262 25.926 0.00 0.00 0.00 1.82
216 217 9.165035 CATGGCATAAATTACACAAAAGGAAAT 57.835 29.630 0.00 0.00 0.00 2.17
217 218 8.370940 TCATGGCATAAATTACACAAAAGGAAA 58.629 29.630 0.00 0.00 0.00 3.13
218 219 7.901029 TCATGGCATAAATTACACAAAAGGAA 58.099 30.769 0.00 0.00 0.00 3.36
219 220 7.473735 TCATGGCATAAATTACACAAAAGGA 57.526 32.000 0.00 0.00 0.00 3.36
220 221 8.721019 ATTCATGGCATAAATTACACAAAAGG 57.279 30.769 0.00 0.00 0.00 3.11
224 225 9.814899 CCTAAATTCATGGCATAAATTACACAA 57.185 29.630 8.98 0.00 0.00 3.33
225 226 9.194972 TCCTAAATTCATGGCATAAATTACACA 57.805 29.630 8.98 0.00 0.00 3.72
226 227 9.683069 CTCCTAAATTCATGGCATAAATTACAC 57.317 33.333 8.98 0.00 0.00 2.90
227 228 8.359642 GCTCCTAAATTCATGGCATAAATTACA 58.640 33.333 8.98 0.49 0.00 2.41
228 229 8.579863 AGCTCCTAAATTCATGGCATAAATTAC 58.420 33.333 8.98 0.00 0.00 1.89
229 230 8.710749 AGCTCCTAAATTCATGGCATAAATTA 57.289 30.769 8.98 3.86 0.00 1.40
230 231 7.522725 CGAGCTCCTAAATTCATGGCATAAATT 60.523 37.037 8.47 2.63 0.00 1.82
231 232 6.072286 CGAGCTCCTAAATTCATGGCATAAAT 60.072 38.462 8.47 0.00 0.00 1.40
232 233 5.239306 CGAGCTCCTAAATTCATGGCATAAA 59.761 40.000 8.47 0.00 0.00 1.40
233 234 4.756642 CGAGCTCCTAAATTCATGGCATAA 59.243 41.667 8.47 0.00 0.00 1.90
234 235 4.040339 TCGAGCTCCTAAATTCATGGCATA 59.960 41.667 8.47 0.00 0.00 3.14
235 236 3.144506 CGAGCTCCTAAATTCATGGCAT 58.855 45.455 8.47 0.00 0.00 4.40
236 237 2.170397 TCGAGCTCCTAAATTCATGGCA 59.830 45.455 8.47 0.00 0.00 4.92
237 238 2.838736 TCGAGCTCCTAAATTCATGGC 58.161 47.619 8.47 0.00 0.00 4.40
238 239 6.035435 CGATATTCGAGCTCCTAAATTCATGG 59.965 42.308 8.47 0.00 43.74 3.66
239 240 6.808704 TCGATATTCGAGCTCCTAAATTCATG 59.191 38.462 8.47 0.00 44.82 3.07
240 241 6.925211 TCGATATTCGAGCTCCTAAATTCAT 58.075 36.000 8.47 0.00 44.82 2.57
241 242 6.327279 TCGATATTCGAGCTCCTAAATTCA 57.673 37.500 8.47 0.00 44.82 2.57
252 253 6.342055 GCTTGTGAGCTTCGATATTCGAGC 62.342 50.000 11.00 11.00 43.87 5.03
253 254 3.181377 GCTTGTGAGCTTCGATATTCGAG 59.819 47.826 0.00 0.00 43.87 4.04
254 255 3.116300 GCTTGTGAGCTTCGATATTCGA 58.884 45.455 0.00 0.00 45.26 3.71
255 256 3.495894 GCTTGTGAGCTTCGATATTCG 57.504 47.619 0.00 0.00 45.65 3.34
279 280 1.082117 AAGGGATAACGCGTGCTTCG 61.082 55.000 14.98 0.00 43.12 3.79
280 281 0.651031 GAAGGGATAACGCGTGCTTC 59.349 55.000 14.98 10.28 0.00 3.86
281 282 0.743345 GGAAGGGATAACGCGTGCTT 60.743 55.000 14.98 0.00 0.00 3.91
282 283 1.153429 GGAAGGGATAACGCGTGCT 60.153 57.895 14.98 2.08 0.00 4.40
283 284 2.522638 CGGAAGGGATAACGCGTGC 61.523 63.158 14.98 5.36 0.00 5.34
284 285 3.700961 CGGAAGGGATAACGCGTG 58.299 61.111 14.98 0.00 0.00 5.34
301 302 2.568090 CAAACATGTCGGCCAGCC 59.432 61.111 2.24 0.00 0.00 4.85
302 303 1.805428 AACCAAACATGTCGGCCAGC 61.805 55.000 12.96 0.00 0.00 4.85
303 304 0.039256 CAACCAAACATGTCGGCCAG 60.039 55.000 12.96 0.00 0.00 4.85
304 305 1.459455 CCAACCAAACATGTCGGCCA 61.459 55.000 12.96 0.00 0.00 5.36
305 306 1.288752 CCAACCAAACATGTCGGCC 59.711 57.895 12.96 0.00 0.00 6.13
306 307 1.175983 TCCCAACCAAACATGTCGGC 61.176 55.000 12.96 0.00 0.00 5.54
307 308 0.596082 GTCCCAACCAAACATGTCGG 59.404 55.000 11.74 11.74 0.00 4.79
308 309 1.266718 CTGTCCCAACCAAACATGTCG 59.733 52.381 0.00 0.00 0.00 4.35
309 310 1.000274 GCTGTCCCAACCAAACATGTC 60.000 52.381 0.00 0.00 0.00 3.06
310 311 1.039856 GCTGTCCCAACCAAACATGT 58.960 50.000 0.00 0.00 0.00 3.21
311 312 0.318120 GGCTGTCCCAACCAAACATG 59.682 55.000 0.00 0.00 0.00 3.21
312 313 1.178534 CGGCTGTCCCAACCAAACAT 61.179 55.000 0.00 0.00 0.00 2.71
313 314 1.826054 CGGCTGTCCCAACCAAACA 60.826 57.895 0.00 0.00 0.00 2.83
314 315 2.561037 CCGGCTGTCCCAACCAAAC 61.561 63.158 0.00 0.00 0.00 2.93
315 316 2.203422 CCGGCTGTCCCAACCAAA 60.203 61.111 0.00 0.00 0.00 3.28
316 317 3.172106 TCCGGCTGTCCCAACCAA 61.172 61.111 0.00 0.00 0.00 3.67
317 318 3.948719 GTCCGGCTGTCCCAACCA 61.949 66.667 0.00 0.00 0.00 3.67
323 324 4.131088 GAGTCCGTCCGGCTGTCC 62.131 72.222 0.00 0.00 34.68 4.02
324 325 3.053849 GAGAGTCCGTCCGGCTGTC 62.054 68.421 0.00 6.26 34.68 3.51
325 326 3.063084 GAGAGTCCGTCCGGCTGT 61.063 66.667 0.00 0.32 34.68 4.40
326 327 1.878656 AAAGAGAGTCCGTCCGGCTG 61.879 60.000 0.00 0.00 34.68 4.85
327 328 1.596895 GAAAGAGAGTCCGTCCGGCT 61.597 60.000 0.00 1.58 34.68 5.52
328 329 1.153804 GAAAGAGAGTCCGTCCGGC 60.154 63.158 0.00 0.00 34.68 6.13
329 330 1.136984 CGAAAGAGAGTCCGTCCGG 59.863 63.158 0.00 0.00 0.00 5.14
330 331 0.179194 GACGAAAGAGAGTCCGTCCG 60.179 60.000 7.42 0.00 43.71 4.79
331 332 3.698678 GACGAAAGAGAGTCCGTCC 57.301 57.895 7.42 0.00 43.71 4.79
332 333 3.698678 GGACGAAAGAGAGTCCGTC 57.301 57.895 9.54 9.54 46.08 4.79
336 337 5.227908 TGTTTACATGGACGAAAGAGAGTC 58.772 41.667 0.00 0.00 36.70 3.36
337 338 5.209818 TGTTTACATGGACGAAAGAGAGT 57.790 39.130 0.00 0.00 0.00 3.24
338 339 6.147821 ACAATGTTTACATGGACGAAAGAGAG 59.852 38.462 4.29 0.00 36.56 3.20
339 340 5.995282 ACAATGTTTACATGGACGAAAGAGA 59.005 36.000 4.29 0.00 36.56 3.10
340 341 6.073276 TCACAATGTTTACATGGACGAAAGAG 60.073 38.462 4.29 0.00 36.56 2.85
341 342 5.760743 TCACAATGTTTACATGGACGAAAGA 59.239 36.000 4.29 0.00 36.56 2.52
342 343 5.851177 GTCACAATGTTTACATGGACGAAAG 59.149 40.000 4.29 0.00 36.56 2.62
343 344 5.559225 CGTCACAATGTTTACATGGACGAAA 60.559 40.000 24.82 0.00 46.77 3.46
344 345 4.084276 CGTCACAATGTTTACATGGACGAA 60.084 41.667 24.82 2.36 46.77 3.85
345 346 3.430556 CGTCACAATGTTTACATGGACGA 59.569 43.478 24.82 11.75 46.77 4.20
346 347 3.731855 CGTCACAATGTTTACATGGACG 58.268 45.455 20.29 20.29 43.10 4.79
347 348 4.742438 ACGTCACAATGTTTACATGGAC 57.258 40.909 4.29 7.95 36.56 4.02
348 349 8.549338 TTATTACGTCACAATGTTTACATGGA 57.451 30.769 4.29 0.00 36.56 3.41
349 350 9.272901 CTTTATTACGTCACAATGTTTACATGG 57.727 33.333 0.00 0.00 36.56 3.66
350 351 8.785101 GCTTTATTACGTCACAATGTTTACATG 58.215 33.333 0.00 0.00 36.56 3.21
351 352 8.726988 AGCTTTATTACGTCACAATGTTTACAT 58.273 29.630 0.00 0.00 38.41 2.29
352 353 8.090250 AGCTTTATTACGTCACAATGTTTACA 57.910 30.769 0.00 0.00 0.00 2.41
353 354 8.944212 AAGCTTTATTACGTCACAATGTTTAC 57.056 30.769 0.00 0.00 0.00 2.01
354 355 7.953173 CGAAGCTTTATTACGTCACAATGTTTA 59.047 33.333 0.00 0.00 0.00 2.01
355 356 6.795114 CGAAGCTTTATTACGTCACAATGTTT 59.205 34.615 0.00 0.00 0.00 2.83
356 357 6.304126 CGAAGCTTTATTACGTCACAATGTT 58.696 36.000 0.00 0.00 0.00 2.71
357 358 5.163893 CCGAAGCTTTATTACGTCACAATGT 60.164 40.000 0.00 0.00 0.00 2.71
358 359 5.062934 TCCGAAGCTTTATTACGTCACAATG 59.937 40.000 0.00 0.00 0.00 2.82
359 360 5.172934 TCCGAAGCTTTATTACGTCACAAT 58.827 37.500 0.00 0.00 0.00 2.71
360 361 4.558178 TCCGAAGCTTTATTACGTCACAA 58.442 39.130 0.00 0.00 0.00 3.33
361 362 4.171005 CTCCGAAGCTTTATTACGTCACA 58.829 43.478 0.00 0.00 0.00 3.58
362 363 4.171754 ACTCCGAAGCTTTATTACGTCAC 58.828 43.478 0.00 0.00 0.00 3.67
363 364 4.445452 ACTCCGAAGCTTTATTACGTCA 57.555 40.909 0.00 0.00 0.00 4.35
364 365 5.548250 CAAACTCCGAAGCTTTATTACGTC 58.452 41.667 0.00 0.00 0.00 4.34
365 366 4.142966 GCAAACTCCGAAGCTTTATTACGT 60.143 41.667 0.00 0.00 0.00 3.57
366 367 4.331962 GCAAACTCCGAAGCTTTATTACG 58.668 43.478 0.00 0.00 0.00 3.18
367 368 4.395231 AGGCAAACTCCGAAGCTTTATTAC 59.605 41.667 0.00 0.00 0.00 1.89
368 369 4.585879 AGGCAAACTCCGAAGCTTTATTA 58.414 39.130 0.00 0.00 0.00 0.98
369 370 3.421844 AGGCAAACTCCGAAGCTTTATT 58.578 40.909 0.00 0.00 0.00 1.40
370 371 3.073274 AGGCAAACTCCGAAGCTTTAT 57.927 42.857 0.00 0.00 0.00 1.40
371 372 2.561478 AGGCAAACTCCGAAGCTTTA 57.439 45.000 0.00 0.00 0.00 1.85
372 373 2.561478 TAGGCAAACTCCGAAGCTTT 57.439 45.000 0.00 0.00 0.00 3.51
373 374 2.561478 TTAGGCAAACTCCGAAGCTT 57.439 45.000 0.00 0.00 0.00 3.74
374 375 2.561478 TTTAGGCAAACTCCGAAGCT 57.439 45.000 0.00 0.00 0.00 3.74
375 376 3.636282 TTTTTAGGCAAACTCCGAAGC 57.364 42.857 0.00 0.00 0.00 3.86
394 395 2.469826 GCGGTTGCTAACTTGCTTTTT 58.530 42.857 0.00 0.00 38.39 1.94
395 396 1.269569 GGCGGTTGCTAACTTGCTTTT 60.270 47.619 12.41 0.00 42.25 2.27
396 397 0.313987 GGCGGTTGCTAACTTGCTTT 59.686 50.000 12.41 0.00 42.25 3.51
397 398 1.852067 CGGCGGTTGCTAACTTGCTT 61.852 55.000 0.00 0.00 42.25 3.91
398 399 2.325082 CGGCGGTTGCTAACTTGCT 61.325 57.895 0.00 0.00 42.25 3.91
399 400 2.175811 CGGCGGTTGCTAACTTGC 59.824 61.111 0.00 0.00 42.25 4.01
400 401 2.175811 GCGGCGGTTGCTAACTTG 59.824 61.111 9.78 0.00 42.25 3.16
401 402 3.053896 GGCGGCGGTTGCTAACTT 61.054 61.111 9.78 0.00 42.25 2.66
404 405 2.575125 TAATCGGCGGCGGTTGCTAA 62.575 55.000 36.33 16.64 42.25 3.09
405 406 2.575125 TTAATCGGCGGCGGTTGCTA 62.575 55.000 36.33 20.06 42.25 3.49
406 407 3.961838 TTAATCGGCGGCGGTTGCT 62.962 57.895 36.33 16.32 42.25 3.91
407 408 3.449095 CTTAATCGGCGGCGGTTGC 62.449 63.158 36.33 0.00 41.71 4.17
408 409 1.762222 CTCTTAATCGGCGGCGGTTG 61.762 60.000 36.33 22.41 0.00 3.77
409 410 1.520787 CTCTTAATCGGCGGCGGTT 60.521 57.895 32.58 32.58 0.00 4.44
410 411 1.952102 TTCTCTTAATCGGCGGCGGT 61.952 55.000 31.73 23.77 0.00 5.68
411 412 1.215655 CTTCTCTTAATCGGCGGCGG 61.216 60.000 31.73 14.95 0.00 6.13
412 413 1.822250 GCTTCTCTTAATCGGCGGCG 61.822 60.000 27.15 27.15 0.00 6.46
413 414 0.810031 TGCTTCTCTTAATCGGCGGC 60.810 55.000 7.21 0.00 0.00 6.53
414 415 1.871080 ATGCTTCTCTTAATCGGCGG 58.129 50.000 7.21 0.00 0.00 6.13
415 416 3.902150 TCTATGCTTCTCTTAATCGGCG 58.098 45.455 0.00 0.00 0.00 6.46
416 417 6.425114 TCAATTCTATGCTTCTCTTAATCGGC 59.575 38.462 0.00 0.00 0.00 5.54
417 418 7.953158 TCAATTCTATGCTTCTCTTAATCGG 57.047 36.000 0.00 0.00 0.00 4.18
418 419 8.494347 CCTTCAATTCTATGCTTCTCTTAATCG 58.506 37.037 0.00 0.00 0.00 3.34
419 420 9.553064 TCCTTCAATTCTATGCTTCTCTTAATC 57.447 33.333 0.00 0.00 0.00 1.75
421 422 9.553064 GATCCTTCAATTCTATGCTTCTCTTAA 57.447 33.333 0.00 0.00 0.00 1.85
422 423 8.932610 AGATCCTTCAATTCTATGCTTCTCTTA 58.067 33.333 0.00 0.00 0.00 2.10
423 424 7.804147 AGATCCTTCAATTCTATGCTTCTCTT 58.196 34.615 0.00 0.00 0.00 2.85
424 425 7.377696 AGATCCTTCAATTCTATGCTTCTCT 57.622 36.000 0.00 0.00 0.00 3.10
425 426 8.987890 GTTAGATCCTTCAATTCTATGCTTCTC 58.012 37.037 0.00 0.00 0.00 2.87
426 427 7.936301 GGTTAGATCCTTCAATTCTATGCTTCT 59.064 37.037 0.00 0.00 0.00 2.85
427 428 7.936301 AGGTTAGATCCTTCAATTCTATGCTTC 59.064 37.037 0.00 0.00 33.52 3.86
428 429 7.718753 CAGGTTAGATCCTTCAATTCTATGCTT 59.281 37.037 0.00 0.00 35.37 3.91
429 430 7.071698 TCAGGTTAGATCCTTCAATTCTATGCT 59.928 37.037 0.00 0.00 35.37 3.79
430 431 7.220030 TCAGGTTAGATCCTTCAATTCTATGC 58.780 38.462 0.00 0.00 35.37 3.14
431 432 9.270640 CTTCAGGTTAGATCCTTCAATTCTATG 57.729 37.037 0.00 0.00 35.37 2.23
432 433 9.218525 TCTTCAGGTTAGATCCTTCAATTCTAT 57.781 33.333 0.00 0.00 35.37 1.98
433 434 8.478877 GTCTTCAGGTTAGATCCTTCAATTCTA 58.521 37.037 0.00 0.00 35.37 2.10
434 435 7.038017 TGTCTTCAGGTTAGATCCTTCAATTCT 60.038 37.037 0.00 0.00 35.37 2.40
435 436 7.065204 GTGTCTTCAGGTTAGATCCTTCAATTC 59.935 40.741 0.00 0.00 35.37 2.17
436 437 6.881602 GTGTCTTCAGGTTAGATCCTTCAATT 59.118 38.462 0.00 0.00 35.37 2.32
437 438 6.013379 TGTGTCTTCAGGTTAGATCCTTCAAT 60.013 38.462 0.00 0.00 35.37 2.57
438 439 5.306937 TGTGTCTTCAGGTTAGATCCTTCAA 59.693 40.000 0.00 0.00 35.37 2.69
439 440 4.838423 TGTGTCTTCAGGTTAGATCCTTCA 59.162 41.667 0.00 0.00 35.37 3.02
440 441 5.172205 GTGTGTCTTCAGGTTAGATCCTTC 58.828 45.833 0.00 0.00 35.37 3.46
441 442 4.593206 TGTGTGTCTTCAGGTTAGATCCTT 59.407 41.667 0.00 0.00 35.37 3.36
442 443 4.160329 TGTGTGTCTTCAGGTTAGATCCT 58.840 43.478 0.00 0.00 38.51 3.24
443 444 4.537135 TGTGTGTCTTCAGGTTAGATCC 57.463 45.455 0.00 0.00 0.00 3.36
444 445 7.173218 TGAATTTGTGTGTCTTCAGGTTAGATC 59.827 37.037 0.00 0.00 0.00 2.75
445 446 6.998074 TGAATTTGTGTGTCTTCAGGTTAGAT 59.002 34.615 0.00 0.00 0.00 1.98
446 447 6.353323 TGAATTTGTGTGTCTTCAGGTTAGA 58.647 36.000 0.00 0.00 0.00 2.10
447 448 6.483307 TCTGAATTTGTGTGTCTTCAGGTTAG 59.517 38.462 10.30 0.00 42.99 2.34
448 449 6.353323 TCTGAATTTGTGTGTCTTCAGGTTA 58.647 36.000 10.30 0.00 42.99 2.85
449 450 5.192927 TCTGAATTTGTGTGTCTTCAGGTT 58.807 37.500 10.30 0.00 42.99 3.50
450 451 4.780815 TCTGAATTTGTGTGTCTTCAGGT 58.219 39.130 10.30 0.00 42.99 4.00
451 452 5.471116 TCATCTGAATTTGTGTGTCTTCAGG 59.529 40.000 10.30 0.00 42.99 3.86
452 453 6.549912 TCATCTGAATTTGTGTGTCTTCAG 57.450 37.500 5.08 5.08 43.73 3.02
453 454 6.511605 CGTTCATCTGAATTTGTGTGTCTTCA 60.512 38.462 0.00 0.00 36.33 3.02
454 455 5.848036 CGTTCATCTGAATTTGTGTGTCTTC 59.152 40.000 0.00 0.00 36.33 2.87
455 456 5.527214 TCGTTCATCTGAATTTGTGTGTCTT 59.473 36.000 0.00 0.00 36.33 3.01
456 457 5.056480 TCGTTCATCTGAATTTGTGTGTCT 58.944 37.500 0.00 0.00 36.33 3.41
457 458 5.342806 TCGTTCATCTGAATTTGTGTGTC 57.657 39.130 0.00 0.00 36.33 3.67
458 459 5.469760 TCATCGTTCATCTGAATTTGTGTGT 59.530 36.000 0.00 0.00 36.33 3.72
459 460 5.930405 TCATCGTTCATCTGAATTTGTGTG 58.070 37.500 0.00 0.00 36.33 3.82
460 461 6.403964 CCATCATCGTTCATCTGAATTTGTGT 60.404 38.462 0.00 0.00 36.33 3.72
461 462 5.969435 CCATCATCGTTCATCTGAATTTGTG 59.031 40.000 0.00 0.00 36.33 3.33
462 463 5.449588 GCCATCATCGTTCATCTGAATTTGT 60.450 40.000 0.00 0.00 36.33 2.83
463 464 4.974275 GCCATCATCGTTCATCTGAATTTG 59.026 41.667 0.00 0.00 36.33 2.32
464 465 4.037208 GGCCATCATCGTTCATCTGAATTT 59.963 41.667 0.00 0.00 36.33 1.82
465 466 3.567164 GGCCATCATCGTTCATCTGAATT 59.433 43.478 0.00 0.00 36.33 2.17
466 467 3.144506 GGCCATCATCGTTCATCTGAAT 58.855 45.455 0.00 0.00 36.33 2.57
467 468 2.171237 AGGCCATCATCGTTCATCTGAA 59.829 45.455 5.01 0.00 0.00 3.02
468 469 1.764723 AGGCCATCATCGTTCATCTGA 59.235 47.619 5.01 0.00 0.00 3.27
469 470 1.871676 CAGGCCATCATCGTTCATCTG 59.128 52.381 5.01 0.00 0.00 2.90
470 471 1.202734 CCAGGCCATCATCGTTCATCT 60.203 52.381 5.01 0.00 0.00 2.90
471 472 1.202687 TCCAGGCCATCATCGTTCATC 60.203 52.381 5.01 0.00 0.00 2.92
472 473 0.839277 TCCAGGCCATCATCGTTCAT 59.161 50.000 5.01 0.00 0.00 2.57
473 474 0.617935 TTCCAGGCCATCATCGTTCA 59.382 50.000 5.01 0.00 0.00 3.18
474 475 1.972872 ATTCCAGGCCATCATCGTTC 58.027 50.000 5.01 0.00 0.00 3.95
475 476 2.442236 AATTCCAGGCCATCATCGTT 57.558 45.000 5.01 0.00 0.00 3.85
476 477 3.576078 TTAATTCCAGGCCATCATCGT 57.424 42.857 5.01 0.00 0.00 3.73
477 478 4.499696 GGTTTTAATTCCAGGCCATCATCG 60.500 45.833 5.01 0.00 0.00 3.84
478 479 4.499696 CGGTTTTAATTCCAGGCCATCATC 60.500 45.833 5.01 0.00 0.00 2.92
479 480 3.384467 CGGTTTTAATTCCAGGCCATCAT 59.616 43.478 5.01 0.00 0.00 2.45
480 481 2.757868 CGGTTTTAATTCCAGGCCATCA 59.242 45.455 5.01 0.00 0.00 3.07
481 482 3.020984 TCGGTTTTAATTCCAGGCCATC 58.979 45.455 5.01 0.00 0.00 3.51
482 483 3.023832 CTCGGTTTTAATTCCAGGCCAT 58.976 45.455 5.01 0.00 0.00 4.40
483 484 2.442413 CTCGGTTTTAATTCCAGGCCA 58.558 47.619 5.01 0.00 0.00 5.36
484 485 1.134367 GCTCGGTTTTAATTCCAGGCC 59.866 52.381 0.00 0.00 0.00 5.19
485 486 1.134367 GGCTCGGTTTTAATTCCAGGC 59.866 52.381 0.00 0.00 0.00 4.85
486 487 2.442413 TGGCTCGGTTTTAATTCCAGG 58.558 47.619 0.00 0.00 0.00 4.45
487 488 4.217550 TCTTTGGCTCGGTTTTAATTCCAG 59.782 41.667 0.00 0.00 0.00 3.86
488 489 4.022676 GTCTTTGGCTCGGTTTTAATTCCA 60.023 41.667 0.00 0.00 0.00 3.53
489 490 4.482386 GTCTTTGGCTCGGTTTTAATTCC 58.518 43.478 0.00 0.00 0.00 3.01
490 491 4.022676 TGGTCTTTGGCTCGGTTTTAATTC 60.023 41.667 0.00 0.00 0.00 2.17
491 492 3.892588 TGGTCTTTGGCTCGGTTTTAATT 59.107 39.130 0.00 0.00 0.00 1.40
492 493 3.492337 TGGTCTTTGGCTCGGTTTTAAT 58.508 40.909 0.00 0.00 0.00 1.40
493 494 2.882137 CTGGTCTTTGGCTCGGTTTTAA 59.118 45.455 0.00 0.00 0.00 1.52
494 495 2.105134 TCTGGTCTTTGGCTCGGTTTTA 59.895 45.455 0.00 0.00 0.00 1.52
495 496 1.133915 TCTGGTCTTTGGCTCGGTTTT 60.134 47.619 0.00 0.00 0.00 2.43
496 497 0.472471 TCTGGTCTTTGGCTCGGTTT 59.528 50.000 0.00 0.00 0.00 3.27
497 498 0.693049 ATCTGGTCTTTGGCTCGGTT 59.307 50.000 0.00 0.00 0.00 4.44
498 499 0.250513 GATCTGGTCTTTGGCTCGGT 59.749 55.000 0.00 0.00 0.00 4.69
499 500 0.462759 GGATCTGGTCTTTGGCTCGG 60.463 60.000 0.00 0.00 0.00 4.63
500 501 0.250234 TGGATCTGGTCTTTGGCTCG 59.750 55.000 0.00 0.00 0.00 5.03
501 502 2.092753 TGATGGATCTGGTCTTTGGCTC 60.093 50.000 0.00 0.00 0.00 4.70
502 503 1.918262 TGATGGATCTGGTCTTTGGCT 59.082 47.619 0.00 0.00 0.00 4.75
503 504 2.019984 GTGATGGATCTGGTCTTTGGC 58.980 52.381 0.00 0.00 0.00 4.52
504 505 3.276857 CTGTGATGGATCTGGTCTTTGG 58.723 50.000 0.00 0.00 0.00 3.28
505 506 3.947868 ACTGTGATGGATCTGGTCTTTG 58.052 45.455 0.00 0.00 0.00 2.77
506 507 5.762179 TTACTGTGATGGATCTGGTCTTT 57.238 39.130 0.00 0.00 0.00 2.52
512 513 7.228108 AGCAAATACATTACTGTGATGGATCTG 59.772 37.037 15.76 11.19 36.79 2.90
513 514 7.285566 AGCAAATACATTACTGTGATGGATCT 58.714 34.615 15.76 4.95 36.79 2.75
525 526 6.969366 TGCATGGTCATAGCAAATACATTAC 58.031 36.000 0.00 0.00 34.97 1.89
527 528 6.265876 TGATGCATGGTCATAGCAAATACATT 59.734 34.615 2.46 0.00 42.15 2.71
537 538 3.250280 GCTTCTGTGATGCATGGTCATAG 59.750 47.826 2.46 4.95 36.51 2.23
547 548 4.155462 TCTCTCATTTTGCTTCTGTGATGC 59.845 41.667 0.00 0.00 34.04 3.91
548 549 5.163744 CCTCTCTCATTTTGCTTCTGTGATG 60.164 44.000 0.00 0.00 0.00 3.07
549 550 4.942483 CCTCTCTCATTTTGCTTCTGTGAT 59.058 41.667 0.00 0.00 0.00 3.06
550 551 4.040829 TCCTCTCTCATTTTGCTTCTGTGA 59.959 41.667 0.00 0.00 0.00 3.58
551 552 4.321718 TCCTCTCTCATTTTGCTTCTGTG 58.678 43.478 0.00 0.00 0.00 3.66
553 554 4.155644 GGTTCCTCTCTCATTTTGCTTCTG 59.844 45.833 0.00 0.00 0.00 3.02
554 555 4.202503 TGGTTCCTCTCTCATTTTGCTTCT 60.203 41.667 0.00 0.00 0.00 2.85
555 556 4.074970 TGGTTCCTCTCTCATTTTGCTTC 58.925 43.478 0.00 0.00 0.00 3.86
556 557 4.077822 CTGGTTCCTCTCTCATTTTGCTT 58.922 43.478 0.00 0.00 0.00 3.91
557 558 3.073650 ACTGGTTCCTCTCTCATTTTGCT 59.926 43.478 0.00 0.00 0.00 3.91
558 559 3.416156 ACTGGTTCCTCTCTCATTTTGC 58.584 45.455 0.00 0.00 0.00 3.68
559 560 4.645535 TGACTGGTTCCTCTCTCATTTTG 58.354 43.478 0.00 0.00 0.00 2.44
560 561 4.982241 TGACTGGTTCCTCTCTCATTTT 57.018 40.909 0.00 0.00 0.00 1.82
591 592 2.029828 CGGAGATGATAAAGAGACCCGG 60.030 54.545 0.00 0.00 0.00 5.73
592 593 2.608261 GCGGAGATGATAAAGAGACCCG 60.608 54.545 0.00 0.00 37.67 5.28
593 594 2.608261 CGCGGAGATGATAAAGAGACCC 60.608 54.545 0.00 0.00 0.00 4.46
594 595 2.608261 CCGCGGAGATGATAAAGAGACC 60.608 54.545 24.07 0.00 0.00 3.85
596 597 2.293677 GACCGCGGAGATGATAAAGAGA 59.706 50.000 35.90 0.00 0.00 3.10
597 598 2.608261 GGACCGCGGAGATGATAAAGAG 60.608 54.545 35.90 0.00 0.00 2.85
598 599 1.340248 GGACCGCGGAGATGATAAAGA 59.660 52.381 35.90 0.00 0.00 2.52
599 600 1.341531 AGGACCGCGGAGATGATAAAG 59.658 52.381 35.90 0.00 0.00 1.85
611 612 0.596083 GATGTGATCAGAGGACCGCG 60.596 60.000 0.00 0.00 0.00 6.46
613 614 1.407936 AGGATGTGATCAGAGGACCG 58.592 55.000 0.00 0.00 0.00 4.79
614 615 2.503356 ACAAGGATGTGATCAGAGGACC 59.497 50.000 0.00 0.38 38.69 4.46
633 634 5.258051 ACCACTTCTACCTTTTGTTTCACA 58.742 37.500 0.00 0.00 0.00 3.58
639 640 4.204799 GTCCAACCACTTCTACCTTTTGT 58.795 43.478 0.00 0.00 0.00 2.83
646 647 4.370917 TGTTTACGTCCAACCACTTCTAC 58.629 43.478 0.00 0.00 0.00 2.59
654 655 4.295857 ACATGTTTGTTTACGTCCAACC 57.704 40.909 0.00 0.00 29.55 3.77
683 684 2.713531 ATCAACAACTTGGGGCGGCT 62.714 55.000 9.56 0.00 0.00 5.52
709 710 4.917887 ACGTACGTACTCTACTCACAAG 57.082 45.455 21.41 5.82 0.00 3.16
821 835 1.199558 GAAAGCTGAAGCCTTGCAGAG 59.800 52.381 0.00 0.00 43.38 3.35
828 842 1.952296 CACAACTGAAAGCTGAAGCCT 59.048 47.619 0.00 0.00 43.38 4.58
905 936 7.886405 AATCATGTGACTTATCTGATCGATG 57.114 36.000 0.54 0.00 33.48 3.84
908 939 7.943413 AGAAATCATGTGACTTATCTGATCG 57.057 36.000 0.00 0.00 0.00 3.69
917 1076 4.217118 GTGGCAGAAGAAATCATGTGACTT 59.783 41.667 0.00 0.00 0.00 3.01
928 1087 1.152830 GGGTGGGTGGCAGAAGAAA 59.847 57.895 0.00 0.00 0.00 2.52
947 1157 6.280643 TCCTGAACAACGGATGAAGTATATG 58.719 40.000 0.00 0.00 0.00 1.78
974 1185 3.821421 ATGGAAGATTGGTACGTCTCC 57.179 47.619 0.00 0.00 0.00 3.71
1088 1413 1.541588 GTCTGAAAATCACACTGGCCC 59.458 52.381 0.00 0.00 0.00 5.80
1433 1869 0.818296 CCCGAAGTCGATCTTGAGGT 59.182 55.000 1.43 0.00 43.02 3.85
1632 2097 2.515057 ACAAACGTTCCGCAGCCA 60.515 55.556 0.00 0.00 0.00 4.75
1691 2157 3.510753 ACGGGGAGAAGAAAGAGAGTAAC 59.489 47.826 0.00 0.00 0.00 2.50
1699 2165 3.075148 GGAAAAGACGGGGAGAAGAAAG 58.925 50.000 0.00 0.00 0.00 2.62
1703 2169 2.027192 TCATGGAAAAGACGGGGAGAAG 60.027 50.000 0.00 0.00 0.00 2.85
1711 2192 3.125316 GGTTGCTACTCATGGAAAAGACG 59.875 47.826 0.00 0.00 0.00 4.18
1744 2227 3.441572 CCCTGTGAATTAGTGAAGCAAGG 59.558 47.826 0.00 0.00 0.00 3.61
1745 2228 4.326826 TCCCTGTGAATTAGTGAAGCAAG 58.673 43.478 0.00 0.00 0.00 4.01
1775 2261 5.858581 GGCAACTACTTCTGCTTGTATTTTG 59.141 40.000 0.00 0.00 38.65 2.44
1800 2286 3.053455 CGCCTTCGTAAAATTTGGCAAA 58.947 40.909 16.01 16.01 40.27 3.68
1812 2298 0.036765 AAAGGTCATGCGCCTTCGTA 60.037 50.000 17.75 0.00 44.84 3.43
1854 2342 5.646467 ATTTCCGAACGTAATGTAATCCG 57.354 39.130 0.00 0.00 0.00 4.18
1855 2343 8.378421 GCTATATTTCCGAACGTAATGTAATCC 58.622 37.037 0.00 0.00 0.00 3.01
1867 3939 8.062448 GTGAATGTTGTAGCTATATTTCCGAAC 58.938 37.037 0.00 0.00 0.00 3.95
1871 3943 7.709269 TCGTGAATGTTGTAGCTATATTTCC 57.291 36.000 0.00 0.00 0.00 3.13
1889 3961 4.562789 GTGTCGAAATCATGAGATCGTGAA 59.437 41.667 23.95 13.18 44.15 3.18
1929 4003 1.222567 GGGCATTCCTCCTTTCCCTA 58.777 55.000 0.00 0.00 0.00 3.53
1943 4017 4.458829 TCGGGAGGACGAGGGCAT 62.459 66.667 0.00 0.00 38.06 4.40
1949 4023 2.092538 AGATTCTTACTCGGGAGGACGA 60.093 50.000 0.00 0.00 41.13 4.20
1950 4024 2.291190 GAGATTCTTACTCGGGAGGACG 59.709 54.545 0.00 0.00 0.00 4.79
1952 4026 3.955524 AGAGATTCTTACTCGGGAGGA 57.044 47.619 0.00 0.00 39.12 3.71
1954 4028 6.452494 TTGTTAGAGATTCTTACTCGGGAG 57.548 41.667 0.00 0.00 39.12 4.30
1955 4029 6.845758 TTTGTTAGAGATTCTTACTCGGGA 57.154 37.500 0.00 0.00 39.12 5.14
1956 4030 6.036191 GCTTTTGTTAGAGATTCTTACTCGGG 59.964 42.308 0.00 0.00 39.12 5.14
1965 4076 8.871686 TTTCCTTTTGCTTTTGTTAGAGATTC 57.128 30.769 0.00 0.00 0.00 2.52
2014 4125 4.039124 AGGCATTTTATCCTATTTTGGCCG 59.961 41.667 0.00 0.00 42.30 6.13
2066 4177 9.502091 GTATGTAGGCATTTTATCCTATTGTCA 57.498 33.333 0.00 0.00 37.30 3.58
2090 4201 2.100197 CGATGAGGAGGTGGACTTGTA 58.900 52.381 0.00 0.00 0.00 2.41
2116 4227 1.364901 GGTTGAGACCGTTGTCCGA 59.635 57.895 0.00 0.00 42.81 4.55
2222 4334 1.261480 GAGGCAGTCTGAAGGAGTGA 58.739 55.000 3.32 0.00 45.60 3.41
2296 4410 2.166459 TGGACGAGAGGATGTGACATTC 59.834 50.000 0.00 0.00 0.00 2.67
2311 4425 1.000394 TCGTGAAGCTTCATTGGACGA 60.000 47.619 30.65 28.00 39.73 4.20
2321 4435 4.074970 AGAAAATGGTCATCGTGAAGCTT 58.925 39.130 0.00 0.00 0.00 3.74
2345 4459 3.247056 TTGGCCATGGCGAACGAGA 62.247 57.895 28.11 8.04 43.06 4.04
2404 4518 3.504134 CAGGCTAGCACGACATACTAGAT 59.496 47.826 18.24 0.00 36.33 1.98


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.