Multiple sequence alignment - TraesCS3A01G519100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G519100 chr3A 100.000 2570 0 0 1 2570 737113170 737115739 0.000000e+00 4747
1 TraesCS3A01G519100 chr3A 84.786 723 74 17 1176 1866 737133273 737133991 0.000000e+00 693
2 TraesCS3A01G519100 chr3A 88.961 154 15 2 527 679 737132934 737133086 3.380000e-44 189
3 TraesCS3A01G519100 chr3A 84.211 171 18 3 343 504 737132713 737132883 9.520000e-35 158
4 TraesCS3A01G519100 chr3A 80.420 143 19 8 928 1070 737133139 737133272 1.630000e-17 100
5 TraesCS3A01G519100 chrUn 90.294 1020 81 12 857 1868 46130886 46131895 0.000000e+00 1319
6 TraesCS3A01G519100 chrUn 87.792 557 62 4 1176 1728 46175405 46175959 0.000000e+00 647
7 TraesCS3A01G519100 chrUn 87.500 160 15 5 521 679 46175082 46175237 2.030000e-41 180
8 TraesCS3A01G519100 chrUn 97.674 43 1 0 1784 1826 46176027 46176069 9.860000e-10 75
9 TraesCS3A01G519100 chr3B 88.857 1032 93 11 848 1866 813752745 813753767 0.000000e+00 1249
10 TraesCS3A01G519100 chr3B 86.378 925 102 10 853 1761 813742271 813743187 0.000000e+00 989
11 TraesCS3A01G519100 chr3B 82.361 720 69 30 1178 1866 813772542 813771850 7.980000e-160 573
12 TraesCS3A01G519100 chr3B 85.263 285 22 3 52 318 785680702 785680984 2.520000e-70 276
13 TraesCS3A01G519100 chr3B 78.367 490 60 30 1383 1836 813704278 813704757 2.520000e-70 276
14 TraesCS3A01G519100 chr3B 87.037 216 23 4 1188 1401 813703971 813704183 3.300000e-59 239
15 TraesCS3A01G519100 chr3B 80.571 175 18 8 892 1059 813772721 813772556 1.250000e-23 121
16 TraesCS3A01G519100 chr6D 91.690 722 44 8 1857 2570 319002958 319003671 0.000000e+00 987
17 TraesCS3A01G519100 chr6D 91.281 734 44 8 1847 2570 455131625 455132348 0.000000e+00 983
18 TraesCS3A01G519100 chr6D 90.884 724 47 6 1859 2570 433439064 433439780 0.000000e+00 953
19 TraesCS3A01G519100 chr2D 91.160 724 46 9 1858 2570 367589189 367589905 0.000000e+00 966
20 TraesCS3A01G519100 chr2D 86.435 317 28 11 2 305 10732484 10732170 1.470000e-87 333
21 TraesCS3A01G519100 chr7A 90.556 720 48 8 1859 2570 48229034 48229741 0.000000e+00 935
22 TraesCS3A01G519100 chr7A 90.041 723 48 12 1858 2570 385565732 385566440 0.000000e+00 915
23 TraesCS3A01G519100 chr5B 90.125 719 52 12 1859 2570 448101860 448102566 0.000000e+00 917
24 TraesCS3A01G519100 chr6A 90.153 721 46 15 1859 2570 603624700 603623996 0.000000e+00 915
25 TraesCS3A01G519100 chr1A 89.861 720 50 8 1858 2570 587829695 587830398 0.000000e+00 904
26 TraesCS3A01G519100 chr1A 84.000 325 18 8 30 325 359905030 359905349 5.410000e-72 281
27 TraesCS3A01G519100 chr3D 91.262 309 20 5 1 306 2674349 2674045 5.120000e-112 414
28 TraesCS3A01G519100 chr3D 84.551 356 19 10 1 323 497739142 497738790 1.150000e-83 320
29 TraesCS3A01G519100 chr3D 81.897 348 24 8 1 321 586917427 586917762 9.120000e-65 257
30 TraesCS3A01G519100 chr7B 89.137 313 22 7 1 306 677510193 677510500 1.870000e-101 379
31 TraesCS3A01G519100 chr4D 88.065 310 30 6 1 306 193351030 193350724 6.760000e-96 361
32 TraesCS3A01G519100 chr4A 87.898 314 24 9 1 306 730009356 730009049 8.740000e-95 357
33 TraesCS3A01G519100 chr7D 90.909 264 16 4 1 258 41263519 41263258 5.260000e-92 348
34 TraesCS3A01G519100 chr7D 87.097 310 32 6 1 305 20719755 20720061 6.810000e-91 344
35 TraesCS3A01G519100 chr7D 85.882 340 27 4 1 322 6569432 6569096 2.450000e-90 342
36 TraesCS3A01G519100 chr7D 84.548 343 28 5 1 321 69046189 69046528 1.480000e-82 316
37 TraesCS3A01G519100 chr7D 82.182 275 15 7 74 316 631345407 631345679 3.350000e-49 206
38 TraesCS3A01G519100 chr5D 89.744 273 22 4 1 268 553798777 553799048 6.810000e-91 344
39 TraesCS3A01G519100 chr5A 87.138 311 26 11 7 306 27975842 27976149 8.810000e-90 340
40 TraesCS3A01G519100 chr5A 84.570 337 19 6 17 322 495921850 495922184 1.160000e-78 303
41 TraesCS3A01G519100 chr1B 87.013 154 18 2 164 317 73394753 73394904 3.400000e-39 172


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G519100 chr3A 737113170 737115739 2569 False 4747.000000 4747 100.000000 1 2570 1 chr3A.!!$F1 2569
1 TraesCS3A01G519100 chr3A 737132713 737133991 1278 False 285.000000 693 84.594500 343 1866 4 chr3A.!!$F2 1523
2 TraesCS3A01G519100 chrUn 46130886 46131895 1009 False 1319.000000 1319 90.294000 857 1868 1 chrUn.!!$F1 1011
3 TraesCS3A01G519100 chrUn 46175082 46176069 987 False 300.666667 647 90.988667 521 1826 3 chrUn.!!$F2 1305
4 TraesCS3A01G519100 chr3B 813752745 813753767 1022 False 1249.000000 1249 88.857000 848 1866 1 chr3B.!!$F3 1018
5 TraesCS3A01G519100 chr3B 813742271 813743187 916 False 989.000000 989 86.378000 853 1761 1 chr3B.!!$F2 908
6 TraesCS3A01G519100 chr3B 813771850 813772721 871 True 347.000000 573 81.466000 892 1866 2 chr3B.!!$R1 974
7 TraesCS3A01G519100 chr3B 813703971 813704757 786 False 257.500000 276 82.702000 1188 1836 2 chr3B.!!$F4 648
8 TraesCS3A01G519100 chr6D 319002958 319003671 713 False 987.000000 987 91.690000 1857 2570 1 chr6D.!!$F1 713
9 TraesCS3A01G519100 chr6D 455131625 455132348 723 False 983.000000 983 91.281000 1847 2570 1 chr6D.!!$F3 723
10 TraesCS3A01G519100 chr6D 433439064 433439780 716 False 953.000000 953 90.884000 1859 2570 1 chr6D.!!$F2 711
11 TraesCS3A01G519100 chr2D 367589189 367589905 716 False 966.000000 966 91.160000 1858 2570 1 chr2D.!!$F1 712
12 TraesCS3A01G519100 chr7A 48229034 48229741 707 False 935.000000 935 90.556000 1859 2570 1 chr7A.!!$F1 711
13 TraesCS3A01G519100 chr7A 385565732 385566440 708 False 915.000000 915 90.041000 1858 2570 1 chr7A.!!$F2 712
14 TraesCS3A01G519100 chr5B 448101860 448102566 706 False 917.000000 917 90.125000 1859 2570 1 chr5B.!!$F1 711
15 TraesCS3A01G519100 chr6A 603623996 603624700 704 True 915.000000 915 90.153000 1859 2570 1 chr6A.!!$R1 711
16 TraesCS3A01G519100 chr1A 587829695 587830398 703 False 904.000000 904 89.861000 1858 2570 1 chr1A.!!$F2 712

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
595 645 0.034756 GGTCAAAAAGCCGCCCAATT 59.965 50.0 0.0 0.0 0.0 2.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1636 1840 1.271163 CCCCACGACTAACAACACCAT 60.271 52.381 0.0 0.0 0.0 3.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 2.996444 GGGTGACCGTTCGAAAAGT 58.004 52.632 0.00 0.00 43.64 2.66
19 20 1.302366 GGGTGACCGTTCGAAAAGTT 58.698 50.000 0.00 0.00 43.64 2.66
20 21 2.482864 GGGTGACCGTTCGAAAAGTTA 58.517 47.619 0.00 0.00 43.64 2.24
21 22 2.477754 GGGTGACCGTTCGAAAAGTTAG 59.522 50.000 0.00 0.00 43.64 2.34
22 23 3.383761 GGTGACCGTTCGAAAAGTTAGA 58.616 45.455 0.00 0.00 0.00 2.10
23 24 3.992427 GGTGACCGTTCGAAAAGTTAGAT 59.008 43.478 0.00 0.00 0.00 1.98
24 25 4.143179 GGTGACCGTTCGAAAAGTTAGATG 60.143 45.833 0.00 0.00 0.00 2.90
25 26 4.682860 GTGACCGTTCGAAAAGTTAGATGA 59.317 41.667 0.00 0.00 0.00 2.92
26 27 5.347907 GTGACCGTTCGAAAAGTTAGATGAT 59.652 40.000 0.00 0.00 0.00 2.45
27 28 5.929992 TGACCGTTCGAAAAGTTAGATGATT 59.070 36.000 0.00 0.00 0.00 2.57
28 29 6.425721 TGACCGTTCGAAAAGTTAGATGATTT 59.574 34.615 0.00 0.00 0.00 2.17
29 30 6.599437 ACCGTTCGAAAAGTTAGATGATTTG 58.401 36.000 0.00 0.00 0.00 2.32
30 31 6.021596 CCGTTCGAAAAGTTAGATGATTTGG 58.978 40.000 0.00 0.00 0.00 3.28
31 32 6.128391 CCGTTCGAAAAGTTAGATGATTTGGA 60.128 38.462 0.00 0.00 0.00 3.53
32 33 7.295201 CGTTCGAAAAGTTAGATGATTTGGAA 58.705 34.615 0.00 0.00 30.49 3.53
33 34 7.962918 CGTTCGAAAAGTTAGATGATTTGGAAT 59.037 33.333 0.00 0.00 33.93 3.01
34 35 9.065871 GTTCGAAAAGTTAGATGATTTGGAATG 57.934 33.333 0.00 0.00 33.93 2.67
35 36 8.560355 TCGAAAAGTTAGATGATTTGGAATGA 57.440 30.769 0.00 0.00 0.00 2.57
36 37 9.177608 TCGAAAAGTTAGATGATTTGGAATGAT 57.822 29.630 0.00 0.00 0.00 2.45
37 38 9.229784 CGAAAAGTTAGATGATTTGGAATGATG 57.770 33.333 0.00 0.00 0.00 3.07
40 41 8.461249 AAGTTAGATGATTTGGAATGATGAGG 57.539 34.615 0.00 0.00 0.00 3.86
41 42 7.002879 AGTTAGATGATTTGGAATGATGAGGG 58.997 38.462 0.00 0.00 0.00 4.30
42 43 4.737578 AGATGATTTGGAATGATGAGGGG 58.262 43.478 0.00 0.00 0.00 4.79
43 44 4.169461 AGATGATTTGGAATGATGAGGGGT 59.831 41.667 0.00 0.00 0.00 4.95
44 45 3.634504 TGATTTGGAATGATGAGGGGTG 58.365 45.455 0.00 0.00 0.00 4.61
45 46 3.269118 TGATTTGGAATGATGAGGGGTGA 59.731 43.478 0.00 0.00 0.00 4.02
46 47 4.079038 TGATTTGGAATGATGAGGGGTGAT 60.079 41.667 0.00 0.00 0.00 3.06
47 48 4.335735 TTTGGAATGATGAGGGGTGATT 57.664 40.909 0.00 0.00 0.00 2.57
48 49 5.464588 TTTGGAATGATGAGGGGTGATTA 57.535 39.130 0.00 0.00 0.00 1.75
49 50 4.712051 TGGAATGATGAGGGGTGATTAG 57.288 45.455 0.00 0.00 0.00 1.73
50 51 4.306391 TGGAATGATGAGGGGTGATTAGA 58.694 43.478 0.00 0.00 0.00 2.10
51 52 4.349048 TGGAATGATGAGGGGTGATTAGAG 59.651 45.833 0.00 0.00 0.00 2.43
52 53 4.594920 GGAATGATGAGGGGTGATTAGAGA 59.405 45.833 0.00 0.00 0.00 3.10
53 54 5.250313 GGAATGATGAGGGGTGATTAGAGAT 59.750 44.000 0.00 0.00 0.00 2.75
54 55 6.240118 GGAATGATGAGGGGTGATTAGAGATT 60.240 42.308 0.00 0.00 0.00 2.40
55 56 7.038017 GGAATGATGAGGGGTGATTAGAGATTA 60.038 40.741 0.00 0.00 0.00 1.75
56 57 7.878621 ATGATGAGGGGTGATTAGAGATTAA 57.121 36.000 0.00 0.00 0.00 1.40
57 58 7.690454 TGATGAGGGGTGATTAGAGATTAAA 57.310 36.000 0.00 0.00 0.00 1.52
58 59 7.739825 TGATGAGGGGTGATTAGAGATTAAAG 58.260 38.462 0.00 0.00 0.00 1.85
59 60 6.500589 TGAGGGGTGATTAGAGATTAAAGG 57.499 41.667 0.00 0.00 0.00 3.11
60 61 5.970640 TGAGGGGTGATTAGAGATTAAAGGT 59.029 40.000 0.00 0.00 0.00 3.50
61 62 6.447084 TGAGGGGTGATTAGAGATTAAAGGTT 59.553 38.462 0.00 0.00 0.00 3.50
62 63 7.626084 TGAGGGGTGATTAGAGATTAAAGGTTA 59.374 37.037 0.00 0.00 0.00 2.85
63 64 8.401955 AGGGGTGATTAGAGATTAAAGGTTAA 57.598 34.615 0.00 0.00 0.00 2.01
64 65 8.842764 AGGGGTGATTAGAGATTAAAGGTTAAA 58.157 33.333 0.00 0.00 0.00 1.52
65 66 9.642343 GGGGTGATTAGAGATTAAAGGTTAAAT 57.358 33.333 0.00 0.00 0.00 1.40
73 74 8.870075 AGAGATTAAAGGTTAAATTGAGCAGT 57.130 30.769 0.00 0.00 0.00 4.40
74 75 8.734386 AGAGATTAAAGGTTAAATTGAGCAGTG 58.266 33.333 0.00 0.00 0.00 3.66
75 76 8.635765 AGATTAAAGGTTAAATTGAGCAGTGA 57.364 30.769 0.00 0.00 0.00 3.41
76 77 9.247861 AGATTAAAGGTTAAATTGAGCAGTGAT 57.752 29.630 0.00 0.00 0.00 3.06
77 78 9.294030 GATTAAAGGTTAAATTGAGCAGTGATG 57.706 33.333 0.00 0.00 0.00 3.07
78 79 6.899393 AAAGGTTAAATTGAGCAGTGATGA 57.101 33.333 0.00 0.00 0.00 2.92
79 80 6.506500 AAGGTTAAATTGAGCAGTGATGAG 57.493 37.500 0.00 0.00 0.00 2.90
80 81 4.946157 AGGTTAAATTGAGCAGTGATGAGG 59.054 41.667 0.00 0.00 0.00 3.86
81 82 4.096984 GGTTAAATTGAGCAGTGATGAGGG 59.903 45.833 0.00 0.00 0.00 4.30
82 83 2.431954 AATTGAGCAGTGATGAGGGG 57.568 50.000 0.00 0.00 0.00 4.79
83 84 1.293062 ATTGAGCAGTGATGAGGGGT 58.707 50.000 0.00 0.00 0.00 4.95
84 85 0.325933 TTGAGCAGTGATGAGGGGTG 59.674 55.000 0.00 0.00 0.00 4.61
85 86 0.545071 TGAGCAGTGATGAGGGGTGA 60.545 55.000 0.00 0.00 0.00 4.02
86 87 0.835941 GAGCAGTGATGAGGGGTGAT 59.164 55.000 0.00 0.00 0.00 3.06
87 88 1.211457 GAGCAGTGATGAGGGGTGATT 59.789 52.381 0.00 0.00 0.00 2.57
88 89 2.435805 GAGCAGTGATGAGGGGTGATTA 59.564 50.000 0.00 0.00 0.00 1.75
89 90 2.437281 AGCAGTGATGAGGGGTGATTAG 59.563 50.000 0.00 0.00 0.00 1.73
90 91 2.435805 GCAGTGATGAGGGGTGATTAGA 59.564 50.000 0.00 0.00 0.00 2.10
91 92 3.494048 GCAGTGATGAGGGGTGATTAGAG 60.494 52.174 0.00 0.00 0.00 2.43
92 93 3.963374 CAGTGATGAGGGGTGATTAGAGA 59.037 47.826 0.00 0.00 0.00 3.10
93 94 4.592351 CAGTGATGAGGGGTGATTAGAGAT 59.408 45.833 0.00 0.00 0.00 2.75
94 95 5.071519 CAGTGATGAGGGGTGATTAGAGATT 59.928 44.000 0.00 0.00 0.00 2.40
95 96 6.268617 CAGTGATGAGGGGTGATTAGAGATTA 59.731 42.308 0.00 0.00 0.00 1.75
96 97 6.496565 AGTGATGAGGGGTGATTAGAGATTAG 59.503 42.308 0.00 0.00 0.00 1.73
97 98 6.495181 GTGATGAGGGGTGATTAGAGATTAGA 59.505 42.308 0.00 0.00 0.00 2.10
98 99 6.723515 TGATGAGGGGTGATTAGAGATTAGAG 59.276 42.308 0.00 0.00 0.00 2.43
99 100 5.398236 TGAGGGGTGATTAGAGATTAGAGG 58.602 45.833 0.00 0.00 0.00 3.69
100 101 5.103043 TGAGGGGTGATTAGAGATTAGAGGT 60.103 44.000 0.00 0.00 0.00 3.85
101 102 5.793967 AGGGGTGATTAGAGATTAGAGGTT 58.206 41.667 0.00 0.00 0.00 3.50
102 103 6.935036 AGGGGTGATTAGAGATTAGAGGTTA 58.065 40.000 0.00 0.00 0.00 2.85
103 104 7.371043 AGGGGTGATTAGAGATTAGAGGTTAA 58.629 38.462 0.00 0.00 0.00 2.01
104 105 7.849904 AGGGGTGATTAGAGATTAGAGGTTAAA 59.150 37.037 0.00 0.00 0.00 1.52
105 106 8.491958 GGGGTGATTAGAGATTAGAGGTTAAAA 58.508 37.037 0.00 0.00 0.00 1.52
168 169 9.689501 AATCATAAAATTTCCTTTAGTACCGGA 57.310 29.630 9.46 0.00 0.00 5.14
169 170 8.496707 TCATAAAATTTCCTTTAGTACCGGAC 57.503 34.615 9.46 1.42 0.00 4.79
170 171 8.323567 TCATAAAATTTCCTTTAGTACCGGACT 58.676 33.333 9.46 10.29 42.69 3.85
171 172 9.603921 CATAAAATTTCCTTTAGTACCGGACTA 57.396 33.333 9.46 9.16 39.81 2.59
179 180 2.610438 AGTACCGGACTAAAGGTGGA 57.390 50.000 9.46 0.00 41.51 4.02
180 181 2.174360 AGTACCGGACTAAAGGTGGAC 58.826 52.381 9.46 0.00 41.51 4.02
181 182 1.205655 GTACCGGACTAAAGGTGGACC 59.794 57.143 9.46 0.00 41.51 4.46
182 183 5.427591 AGTACCGGACTAAAGGTGGACCT 62.428 52.174 9.46 0.00 42.46 3.85
183 184 6.111387 AGTACCGGACTAAAGGTGGACCTA 62.111 50.000 9.46 0.00 40.63 3.08
184 185 8.767776 TAGTACCGGACTAAAGGTGGACCTAC 62.768 50.000 9.46 0.00 41.94 3.18
190 191 4.136978 AGGTGGACCTACAGGCAG 57.863 61.111 0.00 0.00 46.48 4.85
191 192 2.269241 GGTGGACCTACAGGCAGC 59.731 66.667 0.00 0.00 39.32 5.25
192 193 2.125512 GTGGACCTACAGGCAGCG 60.126 66.667 0.00 0.00 39.32 5.18
193 194 3.390521 TGGACCTACAGGCAGCGG 61.391 66.667 0.00 0.00 39.32 5.52
194 195 4.840005 GGACCTACAGGCAGCGGC 62.840 72.222 0.00 0.00 39.32 6.53
210 211 2.037847 GCCATGTGGAGGGCCTTT 59.962 61.111 7.89 0.00 43.69 3.11
211 212 1.306296 GCCATGTGGAGGGCCTTTA 59.694 57.895 7.89 0.00 43.69 1.85
212 213 0.753111 GCCATGTGGAGGGCCTTTAG 60.753 60.000 7.89 0.00 43.69 1.85
213 214 0.625849 CCATGTGGAGGGCCTTTAGT 59.374 55.000 7.89 0.00 37.39 2.24
214 215 1.408822 CCATGTGGAGGGCCTTTAGTC 60.409 57.143 7.89 0.00 37.39 2.59
215 216 0.919710 ATGTGGAGGGCCTTTAGTCC 59.080 55.000 7.89 4.32 34.31 3.85
216 217 0.178873 TGTGGAGGGCCTTTAGTCCT 60.179 55.000 7.89 0.00 34.31 3.85
217 218 0.253327 GTGGAGGGCCTTTAGTCCTG 59.747 60.000 7.89 0.00 34.31 3.86
218 219 0.118346 TGGAGGGCCTTTAGTCCTGA 59.882 55.000 7.89 0.00 34.31 3.86
219 220 1.274416 TGGAGGGCCTTTAGTCCTGAT 60.274 52.381 7.89 0.00 34.31 2.90
220 221 1.847088 GGAGGGCCTTTAGTCCTGATT 59.153 52.381 7.89 0.00 0.00 2.57
221 222 2.158740 GGAGGGCCTTTAGTCCTGATTC 60.159 54.545 7.89 0.00 0.00 2.52
222 223 1.486726 AGGGCCTTTAGTCCTGATTCG 59.513 52.381 0.00 0.00 0.00 3.34
223 224 1.209747 GGGCCTTTAGTCCTGATTCGT 59.790 52.381 0.84 0.00 0.00 3.85
224 225 2.433239 GGGCCTTTAGTCCTGATTCGTA 59.567 50.000 0.84 0.00 0.00 3.43
225 226 3.071167 GGGCCTTTAGTCCTGATTCGTAT 59.929 47.826 0.84 0.00 0.00 3.06
226 227 4.282703 GGGCCTTTAGTCCTGATTCGTATA 59.717 45.833 0.84 0.00 0.00 1.47
227 228 5.221581 GGGCCTTTAGTCCTGATTCGTATAA 60.222 44.000 0.84 0.00 0.00 0.98
228 229 5.927115 GGCCTTTAGTCCTGATTCGTATAAG 59.073 44.000 0.00 0.00 0.00 1.73
229 230 6.239232 GGCCTTTAGTCCTGATTCGTATAAGA 60.239 42.308 0.00 0.00 0.00 2.10
230 231 7.208080 GCCTTTAGTCCTGATTCGTATAAGAA 58.792 38.462 3.51 3.51 34.31 2.52
231 232 7.169476 GCCTTTAGTCCTGATTCGTATAAGAAC 59.831 40.741 3.08 0.00 32.39 3.01
232 233 7.652507 CCTTTAGTCCTGATTCGTATAAGAACC 59.347 40.741 3.08 0.00 32.39 3.62
233 234 5.184340 AGTCCTGATTCGTATAAGAACCG 57.816 43.478 3.08 0.00 32.39 4.44
234 235 4.037684 AGTCCTGATTCGTATAAGAACCGG 59.962 45.833 0.00 0.00 32.39 5.28
235 236 3.319972 TCCTGATTCGTATAAGAACCGGG 59.680 47.826 13.13 13.13 40.79 5.73
236 237 3.319972 CCTGATTCGTATAAGAACCGGGA 59.680 47.826 13.92 0.00 41.76 5.14
237 238 4.296690 CTGATTCGTATAAGAACCGGGAC 58.703 47.826 6.32 0.00 32.39 4.46
238 239 3.956199 TGATTCGTATAAGAACCGGGACT 59.044 43.478 6.32 0.73 32.39 3.85
239 240 5.132502 TGATTCGTATAAGAACCGGGACTA 58.867 41.667 6.32 0.00 32.39 2.59
240 241 5.593909 TGATTCGTATAAGAACCGGGACTAA 59.406 40.000 6.32 0.00 32.39 2.24
241 242 5.913137 TTCGTATAAGAACCGGGACTAAA 57.087 39.130 6.32 0.00 0.00 1.85
242 243 5.505173 TCGTATAAGAACCGGGACTAAAG 57.495 43.478 6.32 0.00 0.00 1.85
243 244 4.339247 TCGTATAAGAACCGGGACTAAAGG 59.661 45.833 6.32 0.44 0.00 3.11
244 245 4.500375 CGTATAAGAACCGGGACTAAAGGG 60.500 50.000 6.32 0.00 0.00 3.95
245 246 0.989602 AAGAACCGGGACTAAAGGGG 59.010 55.000 6.32 0.00 0.00 4.79
246 247 0.912968 AGAACCGGGACTAAAGGGGG 60.913 60.000 6.32 0.00 0.00 5.40
247 248 0.911045 GAACCGGGACTAAAGGGGGA 60.911 60.000 6.32 0.00 0.00 4.81
248 249 0.912968 AACCGGGACTAAAGGGGGAG 60.913 60.000 6.32 0.00 0.00 4.30
249 250 2.070650 CCGGGACTAAAGGGGGAGG 61.071 68.421 0.00 0.00 0.00 4.30
250 251 2.743179 CGGGACTAAAGGGGGAGGC 61.743 68.421 0.00 0.00 0.00 4.70
251 252 1.307953 GGGACTAAAGGGGGAGGCT 60.308 63.158 0.00 0.00 0.00 4.58
252 253 0.919780 GGGACTAAAGGGGGAGGCTT 60.920 60.000 0.00 0.00 0.00 4.35
253 254 1.000496 GGACTAAAGGGGGAGGCTTT 59.000 55.000 0.00 0.00 0.00 3.51
254 255 2.202707 GGACTAAAGGGGGAGGCTTTA 58.797 52.381 0.00 0.00 0.00 1.85
255 256 2.172930 GGACTAAAGGGGGAGGCTTTAG 59.827 54.545 1.97 1.97 42.84 1.85
256 257 2.930653 ACTAAAGGGGGAGGCTTTAGT 58.069 47.619 2.77 2.77 44.28 2.24
257 258 4.084466 ACTAAAGGGGGAGGCTTTAGTA 57.916 45.455 5.23 0.00 46.00 1.82
258 259 3.779183 ACTAAAGGGGGAGGCTTTAGTAC 59.221 47.826 5.23 0.00 46.00 2.73
259 260 1.592948 AAGGGGGAGGCTTTAGTACC 58.407 55.000 0.00 0.00 0.00 3.34
260 261 0.690077 AGGGGGAGGCTTTAGTACCG 60.690 60.000 0.00 0.00 0.00 4.02
261 262 0.688749 GGGGGAGGCTTTAGTACCGA 60.689 60.000 0.00 0.00 0.00 4.69
262 263 0.463204 GGGGAGGCTTTAGTACCGAC 59.537 60.000 0.00 0.00 0.00 4.79
263 264 0.463204 GGGAGGCTTTAGTACCGACC 59.537 60.000 0.00 0.00 0.00 4.79
264 265 0.463204 GGAGGCTTTAGTACCGACCC 59.537 60.000 0.00 0.00 0.00 4.46
265 266 1.482954 GAGGCTTTAGTACCGACCCT 58.517 55.000 0.00 0.00 0.00 4.34
266 267 1.829849 GAGGCTTTAGTACCGACCCTT 59.170 52.381 0.00 0.00 0.00 3.95
267 268 2.235650 GAGGCTTTAGTACCGACCCTTT 59.764 50.000 0.00 0.00 0.00 3.11
268 269 3.444029 AGGCTTTAGTACCGACCCTTTA 58.556 45.455 0.00 0.00 0.00 1.85
269 270 3.450096 AGGCTTTAGTACCGACCCTTTAG 59.550 47.826 0.00 0.00 0.00 1.85
270 271 3.196469 GGCTTTAGTACCGACCCTTTAGT 59.804 47.826 0.00 0.00 0.00 2.24
271 272 4.323028 GGCTTTAGTACCGACCCTTTAGTT 60.323 45.833 0.00 0.00 0.00 2.24
272 273 4.867047 GCTTTAGTACCGACCCTTTAGTTC 59.133 45.833 0.00 0.00 0.00 3.01
273 274 5.405935 TTTAGTACCGACCCTTTAGTTCC 57.594 43.478 0.00 0.00 0.00 3.62
274 275 1.821136 AGTACCGACCCTTTAGTTCCG 59.179 52.381 0.00 0.00 0.00 4.30
275 276 1.134995 GTACCGACCCTTTAGTTCCGG 60.135 57.143 0.00 0.00 42.30 5.14
276 277 1.449070 CCGACCCTTTAGTTCCGGC 60.449 63.158 0.00 0.00 0.00 6.13
277 278 1.449070 CGACCCTTTAGTTCCGGCC 60.449 63.158 0.00 0.00 0.00 6.13
278 279 1.077930 GACCCTTTAGTTCCGGCCC 60.078 63.158 0.00 0.00 0.00 5.80
279 280 1.540617 ACCCTTTAGTTCCGGCCCT 60.541 57.895 0.00 0.00 0.00 5.19
280 281 1.138228 ACCCTTTAGTTCCGGCCCTT 61.138 55.000 0.00 0.00 0.00 3.95
281 282 0.913924 CCCTTTAGTTCCGGCCCTTA 59.086 55.000 0.00 0.00 0.00 2.69
282 283 1.493446 CCCTTTAGTTCCGGCCCTTAT 59.507 52.381 0.00 0.00 0.00 1.73
283 284 2.572290 CCTTTAGTTCCGGCCCTTATG 58.428 52.381 0.00 0.00 0.00 1.90
284 285 2.171870 CCTTTAGTTCCGGCCCTTATGA 59.828 50.000 0.00 0.00 0.00 2.15
285 286 3.371166 CCTTTAGTTCCGGCCCTTATGAA 60.371 47.826 0.00 0.00 0.00 2.57
286 287 4.461198 CTTTAGTTCCGGCCCTTATGAAT 58.539 43.478 0.00 0.00 0.00 2.57
287 288 2.640316 AGTTCCGGCCCTTATGAATC 57.360 50.000 0.00 0.00 0.00 2.52
288 289 1.202651 AGTTCCGGCCCTTATGAATCG 60.203 52.381 0.00 0.00 0.00 3.34
289 290 0.107831 TTCCGGCCCTTATGAATCGG 59.892 55.000 0.00 0.00 38.92 4.18
290 291 1.302511 CCGGCCCTTATGAATCGGG 60.303 63.158 0.00 0.00 41.06 5.14
291 292 1.752198 CGGCCCTTATGAATCGGGA 59.248 57.895 0.00 0.00 40.55 5.14
292 293 0.602905 CGGCCCTTATGAATCGGGAC 60.603 60.000 0.00 0.00 42.93 4.46
293 294 0.765510 GGCCCTTATGAATCGGGACT 59.234 55.000 0.00 0.00 43.05 3.85
294 295 1.975680 GGCCCTTATGAATCGGGACTA 59.024 52.381 0.00 0.00 43.05 2.59
295 296 2.370849 GGCCCTTATGAATCGGGACTAA 59.629 50.000 0.00 0.00 43.05 2.24
296 297 3.181448 GGCCCTTATGAATCGGGACTAAA 60.181 47.826 0.00 0.00 43.05 1.85
297 298 4.065789 GCCCTTATGAATCGGGACTAAAG 58.934 47.826 0.00 0.00 40.55 1.85
298 299 4.642429 CCCTTATGAATCGGGACTAAAGG 58.358 47.826 0.00 0.00 40.55 3.11
299 300 4.065789 CCTTATGAATCGGGACTAAAGGC 58.934 47.826 0.00 0.00 0.00 4.35
300 301 2.640316 ATGAATCGGGACTAAAGGCC 57.360 50.000 0.00 0.00 0.00 5.19
301 302 0.544697 TGAATCGGGACTAAAGGCCC 59.455 55.000 11.29 11.29 41.11 5.80
302 303 0.837940 GAATCGGGACTAAAGGCCCT 59.162 55.000 18.97 0.00 42.40 5.19
303 304 1.212195 GAATCGGGACTAAAGGCCCTT 59.788 52.381 18.97 7.21 42.40 3.95
304 305 2.185663 ATCGGGACTAAAGGCCCTTA 57.814 50.000 18.97 7.28 42.40 2.69
305 306 2.185663 TCGGGACTAAAGGCCCTTAT 57.814 50.000 18.97 0.00 42.40 1.73
306 307 2.484602 TCGGGACTAAAGGCCCTTATT 58.515 47.619 18.97 0.00 42.40 1.40
307 308 2.436911 TCGGGACTAAAGGCCCTTATTC 59.563 50.000 18.97 0.25 42.40 1.75
308 309 2.438392 CGGGACTAAAGGCCCTTATTCT 59.562 50.000 18.97 0.00 42.40 2.40
309 310 3.494573 CGGGACTAAAGGCCCTTATTCTC 60.495 52.174 18.97 6.39 42.40 2.87
310 311 3.458487 GGGACTAAAGGCCCTTATTCTCA 59.542 47.826 14.19 0.00 41.31 3.27
311 312 4.104897 GGGACTAAAGGCCCTTATTCTCAT 59.895 45.833 14.19 0.00 41.31 2.90
312 313 5.309806 GGGACTAAAGGCCCTTATTCTCATA 59.690 44.000 14.19 0.00 41.31 2.15
313 314 6.468543 GGACTAAAGGCCCTTATTCTCATAG 58.531 44.000 10.37 0.00 0.00 2.23
314 315 6.043358 GGACTAAAGGCCCTTATTCTCATAGT 59.957 42.308 10.37 0.00 0.00 2.12
315 316 6.831976 ACTAAAGGCCCTTATTCTCATAGTG 58.168 40.000 0.00 0.00 0.00 2.74
316 317 5.717119 AAAGGCCCTTATTCTCATAGTGT 57.283 39.130 0.00 0.00 0.00 3.55
317 318 6.824958 AAAGGCCCTTATTCTCATAGTGTA 57.175 37.500 0.00 0.00 0.00 2.90
318 319 6.824958 AAGGCCCTTATTCTCATAGTGTAA 57.175 37.500 0.00 0.00 0.00 2.41
319 320 6.824958 AGGCCCTTATTCTCATAGTGTAAA 57.175 37.500 0.00 0.00 0.00 2.01
320 321 6.831976 AGGCCCTTATTCTCATAGTGTAAAG 58.168 40.000 0.00 0.00 0.00 1.85
321 322 6.615726 AGGCCCTTATTCTCATAGTGTAAAGA 59.384 38.462 0.00 0.00 0.00 2.52
322 323 6.931840 GGCCCTTATTCTCATAGTGTAAAGAG 59.068 42.308 0.00 0.00 0.00 2.85
323 324 7.202011 GGCCCTTATTCTCATAGTGTAAAGAGA 60.202 40.741 0.00 0.00 35.49 3.10
324 325 7.654116 GCCCTTATTCTCATAGTGTAAAGAGAC 59.346 40.741 0.00 0.00 36.90 3.36
325 326 8.696374 CCCTTATTCTCATAGTGTAAAGAGACA 58.304 37.037 0.00 0.00 36.90 3.41
337 338 6.519353 TGTAAAGAGACACAAATACACACG 57.481 37.500 0.00 0.00 0.00 4.49
338 339 6.274579 TGTAAAGAGACACAAATACACACGA 58.725 36.000 0.00 0.00 0.00 4.35
339 340 6.757478 TGTAAAGAGACACAAATACACACGAA 59.243 34.615 0.00 0.00 0.00 3.85
340 341 6.671614 AAAGAGACACAAATACACACGAAA 57.328 33.333 0.00 0.00 0.00 3.46
341 342 5.907197 AGAGACACAAATACACACGAAAG 57.093 39.130 0.00 0.00 0.00 2.62
347 348 5.815740 ACACAAATACACACGAAAGAAGACT 59.184 36.000 0.00 0.00 0.00 3.24
348 349 6.129393 CACAAATACACACGAAAGAAGACTG 58.871 40.000 0.00 0.00 0.00 3.51
360 361 5.435291 GAAAGAAGACTGGATCCATCACAT 58.565 41.667 16.63 2.67 0.00 3.21
362 363 5.447778 AGAAGACTGGATCCATCACATTT 57.552 39.130 16.63 4.44 0.00 2.32
372 373 8.765488 TGGATCCATCACATTTATGTATTTGT 57.235 30.769 11.44 0.00 39.39 2.83
386 387 6.618287 ATGTATTTGTTATGACCATCACGG 57.382 37.500 0.00 0.00 42.50 4.94
388 389 6.174049 TGTATTTGTTATGACCATCACGGAA 58.826 36.000 0.00 0.00 38.63 4.30
389 390 5.818136 ATTTGTTATGACCATCACGGAAG 57.182 39.130 0.00 0.00 38.63 3.46
390 391 2.627945 TGTTATGACCATCACGGAAGC 58.372 47.619 0.00 0.00 38.63 3.86
437 447 2.743938 CCGGGTCAGTTTATCATCTCG 58.256 52.381 0.00 0.00 0.00 4.04
439 449 2.100916 CGGGTCAGTTTATCATCTCGGT 59.899 50.000 0.00 0.00 0.00 4.69
440 450 3.317149 CGGGTCAGTTTATCATCTCGGTA 59.683 47.826 0.00 0.00 0.00 4.02
459 469 3.572255 GGTAGTCCTCTGATCACATCCTC 59.428 52.174 0.00 0.00 0.00 3.71
472 482 3.436704 TCACATCCTCGTGAATCAAAAGC 59.563 43.478 0.00 0.00 42.82 3.51
474 484 3.438087 ACATCCTCGTGAATCAAAAGCTG 59.562 43.478 0.00 0.00 0.00 4.24
480 490 3.882888 TCGTGAATCAAAAGCTGGAAGTT 59.117 39.130 0.00 0.00 35.30 2.66
496 506 4.095185 TGGAAGTTGTTGGACGTAAACAAG 59.905 41.667 22.55 0.00 45.49 3.16
498 508 3.275999 AGTTGTTGGACGTAAACAAGCT 58.724 40.909 22.55 19.18 45.49 3.74
504 514 4.062677 TGGACGTAAACAAGCTTGTACT 57.937 40.909 31.31 22.69 41.31 2.73
505 515 4.444536 TGGACGTAAACAAGCTTGTACTT 58.555 39.130 31.31 23.89 41.31 2.24
514 564 7.629027 AAACAAGCTTGTACTTAGTACGTAC 57.371 36.000 31.31 18.10 41.41 3.67
515 565 6.566197 ACAAGCTTGTACTTAGTACGTACT 57.434 37.500 30.25 29.62 41.41 2.73
516 566 7.672983 ACAAGCTTGTACTTAGTACGTACTA 57.327 36.000 30.25 27.51 41.41 1.82
517 567 8.273780 ACAAGCTTGTACTTAGTACGTACTAT 57.726 34.615 30.56 21.12 41.41 2.12
518 568 8.734386 ACAAGCTTGTACTTAGTACGTACTATT 58.266 33.333 30.56 23.14 41.41 1.73
519 569 9.219497 CAAGCTTGTACTTAGTACGTACTATTC 57.781 37.037 30.56 21.10 41.41 1.75
520 570 8.729805 AGCTTGTACTTAGTACGTACTATTCT 57.270 34.615 30.56 19.45 41.41 2.40
521 571 9.823647 AGCTTGTACTTAGTACGTACTATTCTA 57.176 33.333 30.56 17.67 41.41 2.10
522 572 9.856803 GCTTGTACTTAGTACGTACTATTCTAC 57.143 37.037 30.56 25.93 41.41 2.59
546 596 1.016653 GTTCTGCACGGCTTCTCTCC 61.017 60.000 0.00 0.00 0.00 3.71
550 600 1.302511 GCACGGCTTCTCTCCCAAA 60.303 57.895 0.00 0.00 0.00 3.28
575 625 3.123050 GTTTGAATATGGGCGCCAAATC 58.877 45.455 30.85 17.56 36.95 2.17
594 644 1.671166 GGTCAAAAAGCCGCCCAAT 59.329 52.632 0.00 0.00 0.00 3.16
595 645 0.034756 GGTCAAAAAGCCGCCCAATT 59.965 50.000 0.00 0.00 0.00 2.32
618 669 6.673154 TGATTAGATCAGTCACATGCTTTG 57.327 37.500 0.00 0.00 33.59 2.77
621 672 6.882610 TTAGATCAGTCACATGCTTTGTTT 57.117 33.333 0.00 0.00 36.00 2.83
628 679 1.925847 CACATGCTTTGTTTTGCACGT 59.074 42.857 0.00 0.00 42.26 4.49
633 684 1.852280 GCTTTGTTTTGCACGTCTTCC 59.148 47.619 0.00 0.00 0.00 3.46
673 724 2.032894 CGATGGGCGTGCTTTAGTAATG 60.033 50.000 0.00 0.00 34.64 1.90
675 726 1.003812 TGGGCGTGCTTTAGTAATGGT 59.996 47.619 0.00 0.00 0.00 3.55
676 727 2.236644 TGGGCGTGCTTTAGTAATGGTA 59.763 45.455 0.00 0.00 0.00 3.25
677 728 2.610833 GGGCGTGCTTTAGTAATGGTAC 59.389 50.000 0.00 0.00 0.00 3.34
678 729 3.528532 GGCGTGCTTTAGTAATGGTACT 58.471 45.455 0.00 0.00 43.27 2.73
679 730 3.308866 GGCGTGCTTTAGTAATGGTACTG 59.691 47.826 0.00 0.00 40.89 2.74
680 731 4.178540 GCGTGCTTTAGTAATGGTACTGA 58.821 43.478 0.00 0.00 40.89 3.41
681 732 4.628333 GCGTGCTTTAGTAATGGTACTGAA 59.372 41.667 0.00 0.00 40.89 3.02
682 733 5.293569 GCGTGCTTTAGTAATGGTACTGAAT 59.706 40.000 0.00 0.00 40.89 2.57
683 734 6.183360 GCGTGCTTTAGTAATGGTACTGAATT 60.183 38.462 0.00 0.00 40.89 2.17
684 735 7.010738 GCGTGCTTTAGTAATGGTACTGAATTA 59.989 37.037 0.00 0.00 40.89 1.40
685 736 8.325997 CGTGCTTTAGTAATGGTACTGAATTAC 58.674 37.037 13.91 13.91 40.89 1.89
686 737 9.379791 GTGCTTTAGTAATGGTACTGAATTACT 57.620 33.333 21.69 21.69 46.35 2.24
720 771 5.809001 AGCAAATAAGAGAATGACCAGTCA 58.191 37.500 2.42 2.42 44.59 3.41
723 774 7.395489 AGCAAATAAGAGAATGACCAGTCAATT 59.605 33.333 4.31 0.45 43.58 2.32
724 775 7.487189 GCAAATAAGAGAATGACCAGTCAATTG 59.513 37.037 4.31 0.00 43.58 2.32
725 776 7.636150 AATAAGAGAATGACCAGTCAATTGG 57.364 36.000 5.42 0.00 43.58 3.16
726 777 3.350833 AGAGAATGACCAGTCAATTGGC 58.649 45.455 0.50 0.50 43.58 4.52
727 778 2.424956 GAGAATGACCAGTCAATTGGCC 59.575 50.000 6.39 0.00 43.58 5.36
728 779 1.133025 GAATGACCAGTCAATTGGCCG 59.867 52.381 6.39 0.00 43.58 6.13
729 780 0.680921 ATGACCAGTCAATTGGCCGG 60.681 55.000 10.85 10.85 43.58 6.13
730 781 2.035626 ACCAGTCAATTGGCCGGG 59.964 61.111 16.53 15.65 42.18 5.73
731 782 2.035626 CCAGTCAATTGGCCGGGT 59.964 61.111 6.39 0.00 0.00 5.28
732 783 2.046285 CCAGTCAATTGGCCGGGTC 61.046 63.158 6.39 0.00 0.00 4.46
733 784 1.303236 CAGTCAATTGGCCGGGTCA 60.303 57.895 6.39 0.00 0.00 4.02
734 785 1.303317 AGTCAATTGGCCGGGTCAC 60.303 57.895 6.39 0.00 0.00 3.67
735 786 1.303317 GTCAATTGGCCGGGTCACT 60.303 57.895 0.00 0.00 0.00 3.41
736 787 0.893727 GTCAATTGGCCGGGTCACTT 60.894 55.000 0.00 0.00 0.00 3.16
737 788 0.178975 TCAATTGGCCGGGTCACTTT 60.179 50.000 0.00 0.00 0.00 2.66
738 789 1.074084 TCAATTGGCCGGGTCACTTTA 59.926 47.619 0.00 0.00 0.00 1.85
739 790 2.099405 CAATTGGCCGGGTCACTTTAT 58.901 47.619 0.00 0.00 0.00 1.40
740 791 2.052782 ATTGGCCGGGTCACTTTATC 57.947 50.000 0.00 0.00 0.00 1.75
741 792 0.034863 TTGGCCGGGTCACTTTATCC 60.035 55.000 0.00 0.00 0.00 2.59
742 793 0.912487 TGGCCGGGTCACTTTATCCT 60.912 55.000 2.18 0.00 0.00 3.24
743 794 0.255033 GGCCGGGTCACTTTATCCTT 59.745 55.000 2.18 0.00 0.00 3.36
744 795 1.379527 GCCGGGTCACTTTATCCTTG 58.620 55.000 2.18 0.00 0.00 3.61
745 796 1.339727 GCCGGGTCACTTTATCCTTGT 60.340 52.381 2.18 0.00 0.00 3.16
746 797 2.356135 CCGGGTCACTTTATCCTTGTG 58.644 52.381 0.00 0.00 0.00 3.33
747 798 2.027561 CCGGGTCACTTTATCCTTGTGA 60.028 50.000 0.00 0.00 38.24 3.58
748 799 3.558321 CCGGGTCACTTTATCCTTGTGAA 60.558 47.826 0.00 0.00 41.52 3.18
749 800 4.069304 CGGGTCACTTTATCCTTGTGAAA 58.931 43.478 0.00 0.00 41.52 2.69
750 801 4.083484 CGGGTCACTTTATCCTTGTGAAAC 60.083 45.833 0.00 0.00 41.52 2.78
767 818 6.735678 GTGAAACAAAAGTGGGAAATTGTT 57.264 33.333 0.00 0.00 45.17 2.83
768 819 6.541969 GTGAAACAAAAGTGGGAAATTGTTG 58.458 36.000 3.78 0.00 43.16 3.33
769 820 5.645497 TGAAACAAAAGTGGGAAATTGTTGG 59.355 36.000 3.78 0.00 43.16 3.77
770 821 5.428184 AACAAAAGTGGGAAATTGTTGGA 57.572 34.783 2.28 0.00 42.57 3.53
771 822 5.428184 ACAAAAGTGGGAAATTGTTGGAA 57.572 34.783 0.00 0.00 32.37 3.53
772 823 5.427378 ACAAAAGTGGGAAATTGTTGGAAG 58.573 37.500 0.00 0.00 32.37 3.46
773 824 5.045942 ACAAAAGTGGGAAATTGTTGGAAGT 60.046 36.000 0.00 0.00 32.37 3.01
774 825 4.670896 AAGTGGGAAATTGTTGGAAGTG 57.329 40.909 0.00 0.00 0.00 3.16
775 826 3.909732 AGTGGGAAATTGTTGGAAGTGA 58.090 40.909 0.00 0.00 0.00 3.41
776 827 4.285863 AGTGGGAAATTGTTGGAAGTGAA 58.714 39.130 0.00 0.00 0.00 3.18
777 828 4.099419 AGTGGGAAATTGTTGGAAGTGAAC 59.901 41.667 0.00 0.00 0.00 3.18
778 829 4.026744 TGGGAAATTGTTGGAAGTGAACA 58.973 39.130 0.00 0.00 0.00 3.18
779 830 4.467795 TGGGAAATTGTTGGAAGTGAACAA 59.532 37.500 0.00 0.00 45.01 2.83
780 831 4.808895 GGGAAATTGTTGGAAGTGAACAAC 59.191 41.667 0.00 0.00 44.03 3.32
781 832 5.395214 GGGAAATTGTTGGAAGTGAACAACT 60.395 40.000 8.71 0.00 44.03 3.16
793 844 5.485662 AGTGAACAACTTGAACTTAGCAC 57.514 39.130 0.00 0.00 34.57 4.40
794 845 4.941263 AGTGAACAACTTGAACTTAGCACA 59.059 37.500 0.00 0.00 34.57 4.57
795 846 5.590259 AGTGAACAACTTGAACTTAGCACAT 59.410 36.000 0.00 0.00 34.57 3.21
796 847 5.682862 GTGAACAACTTGAACTTAGCACATG 59.317 40.000 0.00 0.00 0.00 3.21
797 848 5.356751 TGAACAACTTGAACTTAGCACATGT 59.643 36.000 0.00 0.00 0.00 3.21
798 849 5.835113 ACAACTTGAACTTAGCACATGTT 57.165 34.783 0.00 0.00 34.11 2.71
799 850 5.581605 ACAACTTGAACTTAGCACATGTTG 58.418 37.500 22.39 22.39 45.83 3.33
810 861 2.665649 CACATGTTGCATTCTGGCAT 57.334 45.000 0.00 0.00 44.48 4.40
811 862 2.967362 CACATGTTGCATTCTGGCATT 58.033 42.857 0.00 0.00 44.48 3.56
812 863 2.927477 CACATGTTGCATTCTGGCATTC 59.073 45.455 0.00 0.00 44.48 2.67
813 864 2.829720 ACATGTTGCATTCTGGCATTCT 59.170 40.909 0.00 0.00 44.48 2.40
814 865 3.186909 CATGTTGCATTCTGGCATTCTG 58.813 45.455 0.00 0.00 44.48 3.02
815 866 1.546923 TGTTGCATTCTGGCATTCTGG 59.453 47.619 0.00 0.00 44.48 3.86
816 867 0.533491 TTGCATTCTGGCATTCTGGC 59.467 50.000 0.00 0.00 44.48 4.85
831 882 3.909587 TGGCAGCCAGAATGCTATT 57.090 47.368 11.22 0.00 43.35 1.73
832 883 1.395635 TGGCAGCCAGAATGCTATTG 58.604 50.000 11.22 0.00 43.35 1.90
833 884 1.064537 TGGCAGCCAGAATGCTATTGA 60.065 47.619 11.22 0.00 43.35 2.57
834 885 2.236766 GGCAGCCAGAATGCTATTGAT 58.763 47.619 6.55 0.00 43.35 2.57
835 886 2.228343 GGCAGCCAGAATGCTATTGATC 59.772 50.000 6.55 0.00 43.35 2.92
836 887 2.882761 GCAGCCAGAATGCTATTGATCA 59.117 45.455 0.00 0.00 40.32 2.92
837 888 3.058155 GCAGCCAGAATGCTATTGATCAG 60.058 47.826 0.00 0.00 40.32 2.90
838 889 4.386711 CAGCCAGAATGCTATTGATCAGA 58.613 43.478 0.00 0.00 40.32 3.27
839 890 4.820173 CAGCCAGAATGCTATTGATCAGAA 59.180 41.667 0.00 0.00 40.32 3.02
840 891 5.298527 CAGCCAGAATGCTATTGATCAGAAA 59.701 40.000 0.00 0.00 40.32 2.52
841 892 5.531659 AGCCAGAATGCTATTGATCAGAAAG 59.468 40.000 0.00 0.00 40.56 2.62
842 893 5.759963 CCAGAATGCTATTGATCAGAAAGC 58.240 41.667 15.38 15.38 31.97 3.51
843 894 5.531659 CCAGAATGCTATTGATCAGAAAGCT 59.468 40.000 20.15 7.26 34.28 3.74
844 895 6.709397 CCAGAATGCTATTGATCAGAAAGCTA 59.291 38.462 20.15 11.34 34.28 3.32
845 896 7.307870 CCAGAATGCTATTGATCAGAAAGCTAC 60.308 40.741 20.15 13.65 34.28 3.58
846 897 6.709846 AGAATGCTATTGATCAGAAAGCTACC 59.290 38.462 20.15 12.13 34.28 3.18
851 902 6.264067 GCTATTGATCAGAAAGCTACCCAATT 59.736 38.462 15.10 0.00 0.00 2.32
871 922 6.017852 CCAATTGATCAGATCAGTCACATGAG 60.018 42.308 12.97 0.00 40.94 2.90
880 931 4.263018 TCAGTCACATGAGTTCTTCTGG 57.737 45.455 0.00 0.00 0.00 3.86
925 977 0.734889 GCAATGCGATAGGTGTGCTT 59.265 50.000 0.00 0.00 0.00 3.91
927 979 1.739466 CAATGCGATAGGTGTGCTTGT 59.261 47.619 0.00 0.00 0.00 3.16
928 980 1.656652 ATGCGATAGGTGTGCTTGTC 58.343 50.000 0.00 0.00 0.00 3.18
929 981 0.608130 TGCGATAGGTGTGCTTGTCT 59.392 50.000 0.00 0.00 0.00 3.41
930 982 1.002366 GCGATAGGTGTGCTTGTCTG 58.998 55.000 0.00 0.00 0.00 3.51
932 984 2.688507 CGATAGGTGTGCTTGTCTGTT 58.311 47.619 0.00 0.00 0.00 3.16
950 1011 8.326765 TGTCTGTTACCCACCATATATACTTT 57.673 34.615 0.00 0.00 0.00 2.66
962 1024 7.009265 CACCATATATACTTTATCCGTTGCTCG 59.991 40.741 0.00 0.00 39.52 5.03
978 1040 1.002251 GCTCGGGAGAAGAGATGTACG 60.002 57.143 0.00 0.00 39.18 3.67
979 1041 2.290464 CTCGGGAGAAGAGATGTACGT 58.710 52.381 0.00 0.00 39.18 3.57
981 1043 3.201290 TCGGGAGAAGAGATGTACGTAC 58.799 50.000 18.90 18.90 34.75 3.67
982 1044 2.290093 CGGGAGAAGAGATGTACGTACC 59.710 54.545 22.43 8.47 0.00 3.34
983 1045 3.285484 GGGAGAAGAGATGTACGTACCA 58.715 50.000 22.43 11.24 0.00 3.25
984 1046 3.698040 GGGAGAAGAGATGTACGTACCAA 59.302 47.826 22.43 5.71 0.00 3.67
985 1047 4.439837 GGGAGAAGAGATGTACGTACCAAC 60.440 50.000 22.43 13.23 0.00 3.77
987 1049 3.446516 AGAAGAGATGTACGTACCAACCC 59.553 47.826 22.43 8.38 0.00 4.11
988 1050 1.747355 AGAGATGTACGTACCAACCCG 59.253 52.381 22.43 0.00 0.00 5.28
989 1051 1.474077 GAGATGTACGTACCAACCCGT 59.526 52.381 22.43 0.00 40.87 5.28
990 1052 1.895131 AGATGTACGTACCAACCCGTT 59.105 47.619 22.43 0.00 38.43 4.44
991 1053 2.299867 AGATGTACGTACCAACCCGTTT 59.700 45.455 22.43 0.00 38.43 3.60
1033 1101 1.562783 CCTCCTCTTCCTCGTCCTTT 58.437 55.000 0.00 0.00 0.00 3.11
1037 1105 1.205893 CCTCTTCCTCGTCCTTTCCTG 59.794 57.143 0.00 0.00 0.00 3.86
1038 1106 0.608640 TCTTCCTCGTCCTTTCCTGC 59.391 55.000 0.00 0.00 0.00 4.85
1039 1107 0.321671 CTTCCTCGTCCTTTCCTGCA 59.678 55.000 0.00 0.00 0.00 4.41
1047 1115 2.821366 CTTTCCTGCATCGCCGCT 60.821 61.111 0.00 0.00 0.00 5.52
1048 1116 3.104602 CTTTCCTGCATCGCCGCTG 62.105 63.158 0.00 0.00 0.00 5.18
1119 1187 2.456119 GGAGTTCTGCATGGCGTCG 61.456 63.158 0.00 0.00 0.00 5.12
1128 1196 0.737715 GCATGGCGTCGTCTTCTTCT 60.738 55.000 0.00 0.00 0.00 2.85
1143 1211 2.788191 CTTCTTCGTGCCCGGAAGCT 62.788 60.000 0.73 0.00 29.76 3.74
1174 1242 2.038007 AGCCGCTCAAGGAGGAGA 59.962 61.111 0.00 0.00 37.02 3.71
1271 1339 2.406401 CGCCAGCAACAGCATAGC 59.594 61.111 0.00 0.00 0.00 2.97
1363 1431 4.083862 GCCCAGAGACCACCGACC 62.084 72.222 0.00 0.00 0.00 4.79
1407 1586 2.584391 GGTGGTGAACCTCGAGGCT 61.584 63.158 31.56 20.68 46.55 4.58
1632 1836 1.080434 CCTTAGCGCGCCCTAGATC 60.080 63.158 30.33 0.00 0.00 2.75
1636 1840 0.323957 TAGCGCGCCCTAGATCTCTA 59.676 55.000 30.33 6.35 0.00 2.43
1651 1859 6.137794 AGATCTCTATGGTGTTGTTAGTCG 57.862 41.667 0.00 0.00 0.00 4.18
1730 1966 2.042104 TTCCTTCGACTTCGTTCGTC 57.958 50.000 0.00 0.00 40.07 4.20
1770 2034 3.335579 AGTCAGCGAGGTGGTTATTTTC 58.664 45.455 2.30 0.00 0.00 2.29
1778 2042 6.154021 AGCGAGGTGGTTATTTTCTTACTCTA 59.846 38.462 0.00 0.00 0.00 2.43
1841 2122 7.066284 GCATGTCTGATTGGTTTACTACTTCAT 59.934 37.037 0.00 0.00 0.00 2.57
1901 2182 4.597004 TGTAACGGGGCCACATTAATTTA 58.403 39.130 5.46 0.00 0.00 1.40
1960 2244 2.295070 ACATTGGCGACCTTTTTACCAC 59.705 45.455 0.00 0.00 0.00 4.16
1983 2277 4.384056 CAAATCCTCACACACACTCTCTT 58.616 43.478 0.00 0.00 0.00 2.85
2017 2311 0.553862 ACTCTCTCTCCCCCTCTCCA 60.554 60.000 0.00 0.00 0.00 3.86
2018 2312 0.859760 CTCTCTCTCCCCCTCTCCAT 59.140 60.000 0.00 0.00 0.00 3.41
2047 2341 4.892345 TCTCTCTCTCTCTCTCTCTCTCTG 59.108 50.000 0.00 0.00 0.00 3.35
2116 2418 4.377328 CCATCTATTTCACACACACACACG 60.377 45.833 0.00 0.00 0.00 4.49
2117 2419 2.542178 TCTATTTCACACACACACACGC 59.458 45.455 0.00 0.00 0.00 5.34
2118 2420 1.090728 ATTTCACACACACACACGCA 58.909 45.000 0.00 0.00 0.00 5.24
2119 2421 0.167033 TTTCACACACACACACGCAC 59.833 50.000 0.00 0.00 0.00 5.34
2482 2794 3.057548 TGACGCAGCCCAAGCATG 61.058 61.111 0.00 0.00 43.56 4.06
2513 2825 0.029700 TCAAGAACGCTCGACAACGA 59.970 50.000 4.90 0.00 46.56 3.85
2525 2837 1.402984 CGACAACGAAGAGGGAAGGAG 60.403 57.143 0.00 0.00 42.66 3.69
2527 2839 2.299297 GACAACGAAGAGGGAAGGAGAA 59.701 50.000 0.00 0.00 0.00 2.87
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.302366 AACTTTTCGAACGGTCACCC 58.698 50.000 0.00 0.00 0.00 4.61
1 2 3.383761 TCTAACTTTTCGAACGGTCACC 58.616 45.455 0.00 0.00 0.00 4.02
2 3 4.682860 TCATCTAACTTTTCGAACGGTCAC 59.317 41.667 0.00 0.00 0.00 3.67
4 5 6.404712 AATCATCTAACTTTTCGAACGGTC 57.595 37.500 0.00 0.00 0.00 4.79
5 6 6.348213 CCAAATCATCTAACTTTTCGAACGGT 60.348 38.462 0.00 0.00 0.00 4.83
6 7 6.021596 CCAAATCATCTAACTTTTCGAACGG 58.978 40.000 0.00 0.00 0.00 4.44
8 9 9.065871 CATTCCAAATCATCTAACTTTTCGAAC 57.934 33.333 0.00 0.00 0.00 3.95
9 10 9.008965 TCATTCCAAATCATCTAACTTTTCGAA 57.991 29.630 0.00 0.00 0.00 3.71
10 11 8.560355 TCATTCCAAATCATCTAACTTTTCGA 57.440 30.769 0.00 0.00 0.00 3.71
11 12 9.229784 CATCATTCCAAATCATCTAACTTTTCG 57.770 33.333 0.00 0.00 0.00 3.46
14 15 8.910944 CCTCATCATTCCAAATCATCTAACTTT 58.089 33.333 0.00 0.00 0.00 2.66
15 16 7.504911 CCCTCATCATTCCAAATCATCTAACTT 59.495 37.037 0.00 0.00 0.00 2.66
16 17 7.002879 CCCTCATCATTCCAAATCATCTAACT 58.997 38.462 0.00 0.00 0.00 2.24
17 18 6.208204 CCCCTCATCATTCCAAATCATCTAAC 59.792 42.308 0.00 0.00 0.00 2.34
18 19 6.126097 ACCCCTCATCATTCCAAATCATCTAA 60.126 38.462 0.00 0.00 0.00 2.10
19 20 5.373555 ACCCCTCATCATTCCAAATCATCTA 59.626 40.000 0.00 0.00 0.00 1.98
20 21 4.169461 ACCCCTCATCATTCCAAATCATCT 59.831 41.667 0.00 0.00 0.00 2.90
21 22 4.280174 CACCCCTCATCATTCCAAATCATC 59.720 45.833 0.00 0.00 0.00 2.92
22 23 4.079038 TCACCCCTCATCATTCCAAATCAT 60.079 41.667 0.00 0.00 0.00 2.45
23 24 3.269118 TCACCCCTCATCATTCCAAATCA 59.731 43.478 0.00 0.00 0.00 2.57
24 25 3.902218 TCACCCCTCATCATTCCAAATC 58.098 45.455 0.00 0.00 0.00 2.17
25 26 4.547886 ATCACCCCTCATCATTCCAAAT 57.452 40.909 0.00 0.00 0.00 2.32
26 27 4.335735 AATCACCCCTCATCATTCCAAA 57.664 40.909 0.00 0.00 0.00 3.28
27 28 4.726317 TCTAATCACCCCTCATCATTCCAA 59.274 41.667 0.00 0.00 0.00 3.53
28 29 4.306391 TCTAATCACCCCTCATCATTCCA 58.694 43.478 0.00 0.00 0.00 3.53
29 30 4.594920 TCTCTAATCACCCCTCATCATTCC 59.405 45.833 0.00 0.00 0.00 3.01
30 31 5.815233 TCTCTAATCACCCCTCATCATTC 57.185 43.478 0.00 0.00 0.00 2.67
31 32 6.776887 AATCTCTAATCACCCCTCATCATT 57.223 37.500 0.00 0.00 0.00 2.57
32 33 7.878621 TTAATCTCTAATCACCCCTCATCAT 57.121 36.000 0.00 0.00 0.00 2.45
33 34 7.202130 CCTTTAATCTCTAATCACCCCTCATCA 60.202 40.741 0.00 0.00 0.00 3.07
34 35 7.164803 CCTTTAATCTCTAATCACCCCTCATC 58.835 42.308 0.00 0.00 0.00 2.92
35 36 6.621514 ACCTTTAATCTCTAATCACCCCTCAT 59.378 38.462 0.00 0.00 0.00 2.90
36 37 5.970640 ACCTTTAATCTCTAATCACCCCTCA 59.029 40.000 0.00 0.00 0.00 3.86
37 38 6.502074 ACCTTTAATCTCTAATCACCCCTC 57.498 41.667 0.00 0.00 0.00 4.30
38 39 6.910259 AACCTTTAATCTCTAATCACCCCT 57.090 37.500 0.00 0.00 0.00 4.79
39 40 9.642343 ATTTAACCTTTAATCTCTAATCACCCC 57.358 33.333 0.00 0.00 0.00 4.95
47 48 9.959721 ACTGCTCAATTTAACCTTTAATCTCTA 57.040 29.630 0.00 0.00 0.00 2.43
48 49 8.734386 CACTGCTCAATTTAACCTTTAATCTCT 58.266 33.333 0.00 0.00 0.00 3.10
49 50 8.730680 TCACTGCTCAATTTAACCTTTAATCTC 58.269 33.333 0.00 0.00 0.00 2.75
50 51 8.635765 TCACTGCTCAATTTAACCTTTAATCT 57.364 30.769 0.00 0.00 0.00 2.40
51 52 9.294030 CATCACTGCTCAATTTAACCTTTAATC 57.706 33.333 0.00 0.00 0.00 1.75
52 53 9.023962 TCATCACTGCTCAATTTAACCTTTAAT 57.976 29.630 0.00 0.00 0.00 1.40
53 54 8.402798 TCATCACTGCTCAATTTAACCTTTAA 57.597 30.769 0.00 0.00 0.00 1.52
54 55 7.121168 CCTCATCACTGCTCAATTTAACCTTTA 59.879 37.037 0.00 0.00 0.00 1.85
55 56 6.071728 CCTCATCACTGCTCAATTTAACCTTT 60.072 38.462 0.00 0.00 0.00 3.11
56 57 5.416952 CCTCATCACTGCTCAATTTAACCTT 59.583 40.000 0.00 0.00 0.00 3.50
57 58 4.946157 CCTCATCACTGCTCAATTTAACCT 59.054 41.667 0.00 0.00 0.00 3.50
58 59 4.096984 CCCTCATCACTGCTCAATTTAACC 59.903 45.833 0.00 0.00 0.00 2.85
59 60 4.096984 CCCCTCATCACTGCTCAATTTAAC 59.903 45.833 0.00 0.00 0.00 2.01
60 61 4.263905 ACCCCTCATCACTGCTCAATTTAA 60.264 41.667 0.00 0.00 0.00 1.52
61 62 3.266772 ACCCCTCATCACTGCTCAATTTA 59.733 43.478 0.00 0.00 0.00 1.40
62 63 2.042162 ACCCCTCATCACTGCTCAATTT 59.958 45.455 0.00 0.00 0.00 1.82
63 64 1.637553 ACCCCTCATCACTGCTCAATT 59.362 47.619 0.00 0.00 0.00 2.32
64 65 1.064906 CACCCCTCATCACTGCTCAAT 60.065 52.381 0.00 0.00 0.00 2.57
65 66 0.325933 CACCCCTCATCACTGCTCAA 59.674 55.000 0.00 0.00 0.00 3.02
66 67 0.545071 TCACCCCTCATCACTGCTCA 60.545 55.000 0.00 0.00 0.00 4.26
67 68 0.835941 ATCACCCCTCATCACTGCTC 59.164 55.000 0.00 0.00 0.00 4.26
68 69 1.293062 AATCACCCCTCATCACTGCT 58.707 50.000 0.00 0.00 0.00 4.24
69 70 2.435805 TCTAATCACCCCTCATCACTGC 59.564 50.000 0.00 0.00 0.00 4.40
70 71 3.963374 TCTCTAATCACCCCTCATCACTG 59.037 47.826 0.00 0.00 0.00 3.66
71 72 4.271807 TCTCTAATCACCCCTCATCACT 57.728 45.455 0.00 0.00 0.00 3.41
72 73 5.559148 AATCTCTAATCACCCCTCATCAC 57.441 43.478 0.00 0.00 0.00 3.06
73 74 6.624297 TCTAATCTCTAATCACCCCTCATCA 58.376 40.000 0.00 0.00 0.00 3.07
74 75 6.154363 CCTCTAATCTCTAATCACCCCTCATC 59.846 46.154 0.00 0.00 0.00 2.92
75 76 6.022315 CCTCTAATCTCTAATCACCCCTCAT 58.978 44.000 0.00 0.00 0.00 2.90
76 77 5.103043 ACCTCTAATCTCTAATCACCCCTCA 60.103 44.000 0.00 0.00 0.00 3.86
77 78 5.399113 ACCTCTAATCTCTAATCACCCCTC 58.601 45.833 0.00 0.00 0.00 4.30
78 79 5.426325 ACCTCTAATCTCTAATCACCCCT 57.574 43.478 0.00 0.00 0.00 4.79
79 80 7.613551 TTAACCTCTAATCTCTAATCACCCC 57.386 40.000 0.00 0.00 0.00 4.95
142 143 9.689501 TCCGGTACTAAAGGAAATTTTATGATT 57.310 29.630 0.00 0.00 32.01 2.57
143 144 9.117183 GTCCGGTACTAAAGGAAATTTTATGAT 57.883 33.333 0.00 0.00 35.60 2.45
144 145 8.323567 AGTCCGGTACTAAAGGAAATTTTATGA 58.676 33.333 0.00 0.00 36.36 2.15
145 146 8.502105 AGTCCGGTACTAAAGGAAATTTTATG 57.498 34.615 0.00 0.00 36.36 1.90
158 159 3.763897 GTCCACCTTTAGTCCGGTACTAA 59.236 47.826 17.33 17.33 46.65 2.24
159 160 3.356290 GTCCACCTTTAGTCCGGTACTA 58.644 50.000 0.00 5.48 39.80 1.82
160 161 2.174360 GTCCACCTTTAGTCCGGTACT 58.826 52.381 0.00 6.57 42.62 2.73
161 162 1.205655 GGTCCACCTTTAGTCCGGTAC 59.794 57.143 0.00 0.00 30.91 3.34
162 163 1.077663 AGGTCCACCTTTAGTCCGGTA 59.922 52.381 0.00 0.00 46.09 4.02
163 164 0.178912 AGGTCCACCTTTAGTCCGGT 60.179 55.000 0.00 0.00 46.09 5.28
164 165 1.479730 GTAGGTCCACCTTTAGTCCGG 59.520 57.143 2.90 0.00 46.09 5.14
165 166 2.165845 CTGTAGGTCCACCTTTAGTCCG 59.834 54.545 2.90 0.00 46.09 4.79
166 167 2.500504 CCTGTAGGTCCACCTTTAGTCC 59.499 54.545 2.90 0.00 46.09 3.85
167 168 2.093606 GCCTGTAGGTCCACCTTTAGTC 60.094 54.545 2.90 0.00 46.09 2.59
168 169 1.907255 GCCTGTAGGTCCACCTTTAGT 59.093 52.381 2.90 0.00 46.09 2.24
169 170 1.906574 TGCCTGTAGGTCCACCTTTAG 59.093 52.381 2.90 3.07 46.09 1.85
170 171 1.906574 CTGCCTGTAGGTCCACCTTTA 59.093 52.381 2.90 0.00 46.09 1.85
171 172 0.693049 CTGCCTGTAGGTCCACCTTT 59.307 55.000 2.90 0.00 46.09 3.11
172 173 1.842381 GCTGCCTGTAGGTCCACCTT 61.842 60.000 2.90 0.00 46.09 3.50
174 175 2.269241 GCTGCCTGTAGGTCCACC 59.731 66.667 0.00 0.00 37.57 4.61
175 176 2.125512 CGCTGCCTGTAGGTCCAC 60.126 66.667 0.00 0.00 37.57 4.02
176 177 3.390521 CCGCTGCCTGTAGGTCCA 61.391 66.667 0.00 0.00 37.57 4.02
177 178 4.840005 GCCGCTGCCTGTAGGTCC 62.840 72.222 0.00 0.00 37.57 4.46
194 195 0.625849 ACTAAAGGCCCTCCACATGG 59.374 55.000 0.00 0.00 33.74 3.66
195 196 1.408822 GGACTAAAGGCCCTCCACATG 60.409 57.143 0.00 0.00 33.74 3.21
196 197 0.919710 GGACTAAAGGCCCTCCACAT 59.080 55.000 0.00 0.00 33.74 3.21
197 198 0.178873 AGGACTAAAGGCCCTCCACA 60.179 55.000 0.00 0.00 33.74 4.17
198 199 0.253327 CAGGACTAAAGGCCCTCCAC 59.747 60.000 0.00 0.00 33.74 4.02
199 200 0.118346 TCAGGACTAAAGGCCCTCCA 59.882 55.000 0.00 0.00 33.74 3.86
200 201 1.512735 ATCAGGACTAAAGGCCCTCC 58.487 55.000 0.00 0.00 0.00 4.30
201 202 2.483889 CGAATCAGGACTAAAGGCCCTC 60.484 54.545 0.00 0.00 0.00 4.30
202 203 1.486726 CGAATCAGGACTAAAGGCCCT 59.513 52.381 0.00 0.00 0.00 5.19
203 204 1.209747 ACGAATCAGGACTAAAGGCCC 59.790 52.381 0.00 0.00 0.00 5.80
204 205 2.693267 ACGAATCAGGACTAAAGGCC 57.307 50.000 0.00 0.00 0.00 5.19
205 206 6.746120 TCTTATACGAATCAGGACTAAAGGC 58.254 40.000 0.00 0.00 0.00 4.35
206 207 7.652507 GGTTCTTATACGAATCAGGACTAAAGG 59.347 40.741 0.00 0.00 0.00 3.11
207 208 7.378995 CGGTTCTTATACGAATCAGGACTAAAG 59.621 40.741 3.43 0.00 0.00 1.85
208 209 7.198390 CGGTTCTTATACGAATCAGGACTAAA 58.802 38.462 3.43 0.00 0.00 1.85
209 210 6.238842 CCGGTTCTTATACGAATCAGGACTAA 60.239 42.308 3.43 0.00 0.00 2.24
210 211 5.240183 CCGGTTCTTATACGAATCAGGACTA 59.760 44.000 3.43 0.00 0.00 2.59
211 212 4.037684 CCGGTTCTTATACGAATCAGGACT 59.962 45.833 3.43 0.00 0.00 3.85
212 213 4.296690 CCGGTTCTTATACGAATCAGGAC 58.703 47.826 3.43 0.00 0.00 3.85
213 214 3.319972 CCCGGTTCTTATACGAATCAGGA 59.680 47.826 0.00 0.00 0.00 3.86
214 215 3.319972 TCCCGGTTCTTATACGAATCAGG 59.680 47.826 0.00 1.27 0.00 3.86
215 216 4.037684 AGTCCCGGTTCTTATACGAATCAG 59.962 45.833 0.00 0.00 0.00 2.90
216 217 3.956199 AGTCCCGGTTCTTATACGAATCA 59.044 43.478 0.00 0.00 0.00 2.57
217 218 4.581077 AGTCCCGGTTCTTATACGAATC 57.419 45.455 0.00 0.00 0.00 2.52
218 219 6.462067 CCTTTAGTCCCGGTTCTTATACGAAT 60.462 42.308 0.00 0.00 0.00 3.34
219 220 5.163519 CCTTTAGTCCCGGTTCTTATACGAA 60.164 44.000 0.00 0.00 0.00 3.85
220 221 4.339247 CCTTTAGTCCCGGTTCTTATACGA 59.661 45.833 0.00 0.00 0.00 3.43
221 222 4.500375 CCCTTTAGTCCCGGTTCTTATACG 60.500 50.000 0.00 0.00 0.00 3.06
222 223 4.202295 CCCCTTTAGTCCCGGTTCTTATAC 60.202 50.000 0.00 0.00 0.00 1.47
223 224 3.969312 CCCCTTTAGTCCCGGTTCTTATA 59.031 47.826 0.00 0.00 0.00 0.98
224 225 2.775960 CCCCTTTAGTCCCGGTTCTTAT 59.224 50.000 0.00 0.00 0.00 1.73
225 226 2.190538 CCCCTTTAGTCCCGGTTCTTA 58.809 52.381 0.00 0.00 0.00 2.10
226 227 0.989602 CCCCTTTAGTCCCGGTTCTT 59.010 55.000 0.00 0.00 0.00 2.52
227 228 0.912968 CCCCCTTTAGTCCCGGTTCT 60.913 60.000 0.00 0.15 0.00 3.01
228 229 0.911045 TCCCCCTTTAGTCCCGGTTC 60.911 60.000 0.00 0.00 0.00 3.62
229 230 0.912968 CTCCCCCTTTAGTCCCGGTT 60.913 60.000 0.00 0.00 0.00 4.44
230 231 1.306739 CTCCCCCTTTAGTCCCGGT 60.307 63.158 0.00 0.00 0.00 5.28
231 232 2.070650 CCTCCCCCTTTAGTCCCGG 61.071 68.421 0.00 0.00 0.00 5.73
232 233 2.743179 GCCTCCCCCTTTAGTCCCG 61.743 68.421 0.00 0.00 0.00 5.14
233 234 0.919780 AAGCCTCCCCCTTTAGTCCC 60.920 60.000 0.00 0.00 0.00 4.46
234 235 1.000496 AAAGCCTCCCCCTTTAGTCC 59.000 55.000 0.00 0.00 31.17 3.85
235 236 3.562343 CTAAAGCCTCCCCCTTTAGTC 57.438 52.381 11.01 0.00 43.17 2.59
238 239 3.117745 GGTACTAAAGCCTCCCCCTTTA 58.882 50.000 0.00 0.00 34.58 1.85
239 240 1.921049 GGTACTAAAGCCTCCCCCTTT 59.079 52.381 0.00 0.00 36.55 3.11
240 241 1.592948 GGTACTAAAGCCTCCCCCTT 58.407 55.000 0.00 0.00 0.00 3.95
241 242 0.690077 CGGTACTAAAGCCTCCCCCT 60.690 60.000 0.00 0.00 0.00 4.79
242 243 0.688749 TCGGTACTAAAGCCTCCCCC 60.689 60.000 0.00 0.00 0.00 5.40
243 244 0.463204 GTCGGTACTAAAGCCTCCCC 59.537 60.000 0.00 0.00 0.00 4.81
244 245 0.463204 GGTCGGTACTAAAGCCTCCC 59.537 60.000 0.00 0.00 0.00 4.30
245 246 0.463204 GGGTCGGTACTAAAGCCTCC 59.537 60.000 0.00 0.00 0.00 4.30
246 247 1.482954 AGGGTCGGTACTAAAGCCTC 58.517 55.000 7.36 0.00 36.14 4.70
247 248 1.948391 AAGGGTCGGTACTAAAGCCT 58.052 50.000 7.36 7.36 42.52 4.58
248 249 2.775911 AAAGGGTCGGTACTAAAGCC 57.224 50.000 0.00 0.00 0.00 4.35
249 250 4.462508 ACTAAAGGGTCGGTACTAAAGC 57.537 45.455 0.00 0.00 0.00 3.51
250 251 5.414360 GGAACTAAAGGGTCGGTACTAAAG 58.586 45.833 0.00 0.00 31.06 1.85
251 252 4.082245 CGGAACTAAAGGGTCGGTACTAAA 60.082 45.833 0.00 0.00 31.06 1.85
252 253 3.443681 CGGAACTAAAGGGTCGGTACTAA 59.556 47.826 0.00 0.00 31.06 2.24
253 254 3.016736 CGGAACTAAAGGGTCGGTACTA 58.983 50.000 0.00 0.00 31.06 1.82
254 255 1.821136 CGGAACTAAAGGGTCGGTACT 59.179 52.381 0.00 0.00 31.06 2.73
255 256 1.134995 CCGGAACTAAAGGGTCGGTAC 60.135 57.143 0.00 0.00 31.12 3.34
256 257 1.185315 CCGGAACTAAAGGGTCGGTA 58.815 55.000 0.00 0.00 31.12 4.02
257 258 1.977685 CCGGAACTAAAGGGTCGGT 59.022 57.895 0.00 0.00 31.12 4.69
258 259 1.449070 GCCGGAACTAAAGGGTCGG 60.449 63.158 5.05 0.00 31.06 4.79
259 260 1.449070 GGCCGGAACTAAAGGGTCG 60.449 63.158 5.05 0.00 31.06 4.79
260 261 1.077930 GGGCCGGAACTAAAGGGTC 60.078 63.158 5.05 0.00 0.00 4.46
261 262 1.138228 AAGGGCCGGAACTAAAGGGT 61.138 55.000 5.05 0.00 0.00 4.34
262 263 0.913924 TAAGGGCCGGAACTAAAGGG 59.086 55.000 5.05 0.00 0.00 3.95
263 264 2.171870 TCATAAGGGCCGGAACTAAAGG 59.828 50.000 5.05 0.00 0.00 3.11
264 265 3.553828 TCATAAGGGCCGGAACTAAAG 57.446 47.619 5.05 0.00 0.00 1.85
265 266 4.457466 GATTCATAAGGGCCGGAACTAAA 58.543 43.478 5.05 0.00 0.00 1.85
266 267 3.493699 CGATTCATAAGGGCCGGAACTAA 60.494 47.826 5.05 0.00 0.00 2.24
267 268 2.036733 CGATTCATAAGGGCCGGAACTA 59.963 50.000 5.05 0.00 0.00 2.24
268 269 1.202651 CGATTCATAAGGGCCGGAACT 60.203 52.381 5.05 0.00 0.00 3.01
269 270 1.226746 CGATTCATAAGGGCCGGAAC 58.773 55.000 5.05 0.00 0.00 3.62
270 271 0.107831 CCGATTCATAAGGGCCGGAA 59.892 55.000 5.05 1.39 39.31 4.30
271 272 1.752198 CCGATTCATAAGGGCCGGA 59.248 57.895 5.05 0.00 39.31 5.14
272 273 1.302511 CCCGATTCATAAGGGCCGG 60.303 63.158 0.00 0.00 38.51 6.13
273 274 0.602905 GTCCCGATTCATAAGGGCCG 60.603 60.000 0.00 0.00 44.70 6.13
274 275 0.765510 AGTCCCGATTCATAAGGGCC 59.234 55.000 0.00 0.00 44.70 5.80
275 276 3.764237 TTAGTCCCGATTCATAAGGGC 57.236 47.619 0.00 0.00 44.70 5.19
276 277 4.642429 CCTTTAGTCCCGATTCATAAGGG 58.358 47.826 0.00 0.00 46.40 3.95
277 278 4.065789 GCCTTTAGTCCCGATTCATAAGG 58.934 47.826 0.00 0.00 35.22 2.69
278 279 4.065789 GGCCTTTAGTCCCGATTCATAAG 58.934 47.826 0.00 0.00 0.00 1.73
279 280 3.181448 GGGCCTTTAGTCCCGATTCATAA 60.181 47.826 0.84 0.00 32.00 1.90
280 281 2.370849 GGGCCTTTAGTCCCGATTCATA 59.629 50.000 0.84 0.00 32.00 2.15
281 282 1.143073 GGGCCTTTAGTCCCGATTCAT 59.857 52.381 0.84 0.00 32.00 2.57
282 283 0.544697 GGGCCTTTAGTCCCGATTCA 59.455 55.000 0.84 0.00 32.00 2.57
283 284 3.398694 GGGCCTTTAGTCCCGATTC 57.601 57.895 0.84 0.00 32.00 2.52
288 289 3.458487 TGAGAATAAGGGCCTTTAGTCCC 59.542 47.826 25.88 18.04 42.94 4.46
289 290 4.772886 TGAGAATAAGGGCCTTTAGTCC 57.227 45.455 25.88 18.92 30.17 3.85
290 291 6.931840 CACTATGAGAATAAGGGCCTTTAGTC 59.068 42.308 26.29 23.21 0.00 2.59
291 292 6.387220 ACACTATGAGAATAAGGGCCTTTAGT 59.613 38.462 26.29 19.77 0.00 2.24
292 293 6.831976 ACACTATGAGAATAAGGGCCTTTAG 58.168 40.000 26.29 19.12 0.00 1.85
293 294 6.824958 ACACTATGAGAATAAGGGCCTTTA 57.175 37.500 26.29 10.10 0.00 1.85
294 295 5.717119 ACACTATGAGAATAAGGGCCTTT 57.283 39.130 26.29 7.24 0.00 3.11
295 296 6.824958 TTACACTATGAGAATAAGGGCCTT 57.175 37.500 24.44 24.44 0.00 4.35
296 297 6.615726 TCTTTACACTATGAGAATAAGGGCCT 59.384 38.462 0.00 0.00 0.00 5.19
297 298 6.827727 TCTTTACACTATGAGAATAAGGGCC 58.172 40.000 0.00 0.00 0.00 5.80
298 299 7.654116 GTCTCTTTACACTATGAGAATAAGGGC 59.346 40.741 0.00 0.00 37.32 5.19
299 300 8.696374 TGTCTCTTTACACTATGAGAATAAGGG 58.304 37.037 0.00 0.00 37.32 3.95
300 301 9.522804 GTGTCTCTTTACACTATGAGAATAAGG 57.477 37.037 0.00 0.00 45.12 2.69
314 315 6.274579 TCGTGTGTATTTGTGTCTCTTTACA 58.725 36.000 0.00 0.00 0.00 2.41
315 316 6.758593 TCGTGTGTATTTGTGTCTCTTTAC 57.241 37.500 0.00 0.00 0.00 2.01
316 317 7.707464 TCTTTCGTGTGTATTTGTGTCTCTTTA 59.293 33.333 0.00 0.00 0.00 1.85
317 318 6.537301 TCTTTCGTGTGTATTTGTGTCTCTTT 59.463 34.615 0.00 0.00 0.00 2.52
318 319 6.046593 TCTTTCGTGTGTATTTGTGTCTCTT 58.953 36.000 0.00 0.00 0.00 2.85
319 320 5.597806 TCTTTCGTGTGTATTTGTGTCTCT 58.402 37.500 0.00 0.00 0.00 3.10
320 321 5.900339 TCTTTCGTGTGTATTTGTGTCTC 57.100 39.130 0.00 0.00 0.00 3.36
321 322 6.018994 GTCTTCTTTCGTGTGTATTTGTGTCT 60.019 38.462 0.00 0.00 0.00 3.41
322 323 6.018994 AGTCTTCTTTCGTGTGTATTTGTGTC 60.019 38.462 0.00 0.00 0.00 3.67
323 324 5.815740 AGTCTTCTTTCGTGTGTATTTGTGT 59.184 36.000 0.00 0.00 0.00 3.72
324 325 6.129393 CAGTCTTCTTTCGTGTGTATTTGTG 58.871 40.000 0.00 0.00 0.00 3.33
325 326 5.236478 CCAGTCTTCTTTCGTGTGTATTTGT 59.764 40.000 0.00 0.00 0.00 2.83
326 327 5.465390 TCCAGTCTTCTTTCGTGTGTATTTG 59.535 40.000 0.00 0.00 0.00 2.32
327 328 5.607477 TCCAGTCTTCTTTCGTGTGTATTT 58.393 37.500 0.00 0.00 0.00 1.40
328 329 5.209818 TCCAGTCTTCTTTCGTGTGTATT 57.790 39.130 0.00 0.00 0.00 1.89
329 330 4.866508 TCCAGTCTTCTTTCGTGTGTAT 57.133 40.909 0.00 0.00 0.00 2.29
330 331 4.321750 GGATCCAGTCTTCTTTCGTGTGTA 60.322 45.833 6.95 0.00 0.00 2.90
331 332 3.555168 GGATCCAGTCTTCTTTCGTGTGT 60.555 47.826 6.95 0.00 0.00 3.72
332 333 2.996621 GGATCCAGTCTTCTTTCGTGTG 59.003 50.000 6.95 0.00 0.00 3.82
333 334 2.632996 TGGATCCAGTCTTCTTTCGTGT 59.367 45.455 11.44 0.00 0.00 4.49
334 335 3.319137 TGGATCCAGTCTTCTTTCGTG 57.681 47.619 11.44 0.00 0.00 4.35
335 336 3.515502 TGATGGATCCAGTCTTCTTTCGT 59.484 43.478 21.33 0.00 0.00 3.85
336 337 3.868077 GTGATGGATCCAGTCTTCTTTCG 59.132 47.826 21.33 0.00 0.00 3.46
337 338 4.836825 TGTGATGGATCCAGTCTTCTTTC 58.163 43.478 21.33 10.51 0.00 2.62
338 339 4.916041 TGTGATGGATCCAGTCTTCTTT 57.084 40.909 21.33 0.00 0.00 2.52
339 340 5.447778 AATGTGATGGATCCAGTCTTCTT 57.552 39.130 21.33 0.15 0.00 2.52
340 341 5.447778 AAATGTGATGGATCCAGTCTTCT 57.552 39.130 21.33 1.01 0.00 2.85
341 342 6.769822 ACATAAATGTGATGGATCCAGTCTTC 59.230 38.462 21.33 13.13 40.03 2.87
347 348 8.765488 ACAAATACATAAATGTGATGGATCCA 57.235 30.769 18.88 18.88 41.89 3.41
360 361 8.616942 CCGTGATGGTCATAACAAATACATAAA 58.383 33.333 0.01 0.00 0.00 1.40
362 363 7.501844 TCCGTGATGGTCATAACAAATACATA 58.498 34.615 0.00 0.00 39.52 2.29
372 373 3.342377 TTGCTTCCGTGATGGTCATAA 57.658 42.857 0.00 0.00 39.52 1.90
382 383 2.005451 CCTCTCTCATTTGCTTCCGTG 58.995 52.381 0.00 0.00 0.00 4.94
383 384 1.902508 TCCTCTCTCATTTGCTTCCGT 59.097 47.619 0.00 0.00 0.00 4.69
384 385 2.675348 GTTCCTCTCTCATTTGCTTCCG 59.325 50.000 0.00 0.00 0.00 4.30
385 386 3.013219 GGTTCCTCTCTCATTTGCTTCC 58.987 50.000 0.00 0.00 0.00 3.46
386 387 3.679389 TGGTTCCTCTCTCATTTGCTTC 58.321 45.455 0.00 0.00 0.00 3.86
388 389 2.641815 ACTGGTTCCTCTCTCATTTGCT 59.358 45.455 0.00 0.00 0.00 3.91
389 390 3.006247 GACTGGTTCCTCTCTCATTTGC 58.994 50.000 0.00 0.00 0.00 3.68
390 391 4.277515 TGACTGGTTCCTCTCTCATTTG 57.722 45.455 0.00 0.00 0.00 2.32
421 427 5.299782 AGGACTACCGAGATGATAAACTGAC 59.700 44.000 0.00 0.00 41.83 3.51
422 428 5.446860 AGGACTACCGAGATGATAAACTGA 58.553 41.667 0.00 0.00 41.83 3.41
423 429 5.533154 AGAGGACTACCGAGATGATAAACTG 59.467 44.000 0.00 0.00 41.83 3.16
424 430 5.533154 CAGAGGACTACCGAGATGATAAACT 59.467 44.000 0.00 0.00 41.83 2.66
437 447 3.571590 AGGATGTGATCAGAGGACTACC 58.428 50.000 0.00 0.00 0.00 3.18
439 449 3.117851 ACGAGGATGTGATCAGAGGACTA 60.118 47.826 0.00 0.00 0.00 2.59
440 450 2.305928 CGAGGATGTGATCAGAGGACT 58.694 52.381 0.00 0.00 0.00 3.85
459 469 3.904136 ACTTCCAGCTTTTGATTCACG 57.096 42.857 0.00 0.00 0.00 4.35
465 475 3.130340 GTCCAACAACTTCCAGCTTTTGA 59.870 43.478 0.00 0.00 0.00 2.69
472 482 3.623960 TGTTTACGTCCAACAACTTCCAG 59.376 43.478 10.09 0.00 31.05 3.86
474 484 4.594136 CTTGTTTACGTCCAACAACTTCC 58.406 43.478 17.69 0.00 38.84 3.46
480 490 3.011119 ACAAGCTTGTTTACGTCCAACA 58.989 40.909 26.36 8.74 38.47 3.33
496 506 9.856803 GTAGAATAGTACGTACTAAGTACAAGC 57.143 37.037 32.80 17.77 44.92 4.01
546 596 3.181487 CGCCCATATTCAAACCTCTTTGG 60.181 47.826 0.00 0.00 37.87 3.28
550 600 1.680338 GCGCCCATATTCAAACCTCT 58.320 50.000 0.00 0.00 0.00 3.69
561 611 1.525077 GACCGATTTGGCGCCCATA 60.525 57.895 26.77 9.61 43.94 2.74
594 644 6.656270 ACAAAGCATGTGACTGATCTAATCAA 59.344 34.615 0.00 0.00 41.93 2.57
595 645 6.175471 ACAAAGCATGTGACTGATCTAATCA 58.825 36.000 0.00 0.00 41.93 2.57
618 669 0.028902 AAGCGGAAGACGTGCAAAAC 59.971 50.000 0.00 0.00 46.52 2.43
621 672 0.812014 TGAAAGCGGAAGACGTGCAA 60.812 50.000 0.00 0.00 46.52 4.08
628 679 0.944386 GCACAACTGAAAGCGGAAGA 59.056 50.000 0.00 0.00 37.60 2.87
633 684 0.780002 GCATTGCACAACTGAAAGCG 59.220 50.000 3.15 0.00 37.60 4.68
676 727 9.953565 TTTGCTTAGTAATGGTAGTAATTCAGT 57.046 29.630 0.00 0.00 0.00 3.41
687 738 9.905713 TCATTCTCTTATTTGCTTAGTAATGGT 57.094 29.630 0.00 0.00 0.00 3.55
690 741 9.905713 TGGTCATTCTCTTATTTGCTTAGTAAT 57.094 29.630 0.00 0.00 0.00 1.89
691 742 9.383519 CTGGTCATTCTCTTATTTGCTTAGTAA 57.616 33.333 0.00 0.00 0.00 2.24
700 751 7.363268 GCCAATTGACTGGTCATTCTCTTATTT 60.363 37.037 7.12 0.00 39.64 1.40
703 754 4.943705 GCCAATTGACTGGTCATTCTCTTA 59.056 41.667 7.12 0.00 39.64 2.10
704 755 3.760684 GCCAATTGACTGGTCATTCTCTT 59.239 43.478 7.12 0.00 39.64 2.85
709 760 1.176527 CGGCCAATTGACTGGTCATT 58.823 50.000 7.12 0.00 41.48 2.57
710 761 0.680921 CCGGCCAATTGACTGGTCAT 60.681 55.000 11.29 0.00 41.48 3.06
720 771 2.375146 GATAAAGTGACCCGGCCAATT 58.625 47.619 2.24 0.00 0.00 2.32
723 774 0.912487 AGGATAAAGTGACCCGGCCA 60.912 55.000 2.24 0.00 0.00 5.36
724 775 0.255033 AAGGATAAAGTGACCCGGCC 59.745 55.000 0.00 0.00 0.00 6.13
725 776 1.339727 ACAAGGATAAAGTGACCCGGC 60.340 52.381 0.00 0.00 0.00 6.13
726 777 2.027561 TCACAAGGATAAAGTGACCCGG 60.028 50.000 0.00 0.00 37.36 5.73
727 778 3.328382 TCACAAGGATAAAGTGACCCG 57.672 47.619 0.00 0.00 37.36 5.28
728 779 4.825085 TGTTTCACAAGGATAAAGTGACCC 59.175 41.667 0.00 0.00 41.53 4.46
729 780 6.385649 TTGTTTCACAAGGATAAAGTGACC 57.614 37.500 0.00 0.00 41.53 4.02
730 781 7.973944 ACTTTTGTTTCACAAGGATAAAGTGAC 59.026 33.333 0.00 0.00 41.53 3.67
731 782 7.973388 CACTTTTGTTTCACAAGGATAAAGTGA 59.027 33.333 18.14 0.00 45.44 3.41
732 783 7.222611 CCACTTTTGTTTCACAAGGATAAAGTG 59.777 37.037 16.97 16.97 43.95 3.16
733 784 7.264947 CCACTTTTGTTTCACAAGGATAAAGT 58.735 34.615 0.00 0.00 39.53 2.66
734 785 6.701400 CCCACTTTTGTTTCACAAGGATAAAG 59.299 38.462 0.00 0.00 39.53 1.85
735 786 6.381420 TCCCACTTTTGTTTCACAAGGATAAA 59.619 34.615 1.73 0.00 39.53 1.40
736 787 5.894393 TCCCACTTTTGTTTCACAAGGATAA 59.106 36.000 1.73 0.00 39.53 1.75
737 788 5.450453 TCCCACTTTTGTTTCACAAGGATA 58.550 37.500 1.73 0.00 39.53 2.59
738 789 4.285863 TCCCACTTTTGTTTCACAAGGAT 58.714 39.130 1.73 0.00 39.53 3.24
739 790 3.702792 TCCCACTTTTGTTTCACAAGGA 58.297 40.909 1.73 0.00 39.53 3.36
740 791 4.464069 TTCCCACTTTTGTTTCACAAGG 57.536 40.909 1.73 0.00 39.53 3.61
741 792 6.371271 ACAATTTCCCACTTTTGTTTCACAAG 59.629 34.615 0.00 0.00 39.53 3.16
742 793 6.234177 ACAATTTCCCACTTTTGTTTCACAA 58.766 32.000 0.00 0.00 36.11 3.33
743 794 5.799213 ACAATTTCCCACTTTTGTTTCACA 58.201 33.333 0.00 0.00 0.00 3.58
744 795 6.403092 CCAACAATTTCCCACTTTTGTTTCAC 60.403 38.462 0.00 0.00 39.55 3.18
745 796 5.645497 CCAACAATTTCCCACTTTTGTTTCA 59.355 36.000 0.00 0.00 39.55 2.69
746 797 5.877564 TCCAACAATTTCCCACTTTTGTTTC 59.122 36.000 0.00 0.00 39.55 2.78
747 798 5.810095 TCCAACAATTTCCCACTTTTGTTT 58.190 33.333 0.00 0.00 39.55 2.83
748 799 5.428184 TCCAACAATTTCCCACTTTTGTT 57.572 34.783 0.00 0.00 41.58 2.83
749 800 5.045942 ACTTCCAACAATTTCCCACTTTTGT 60.046 36.000 0.00 0.00 33.93 2.83
750 801 5.294060 CACTTCCAACAATTTCCCACTTTTG 59.706 40.000 0.00 0.00 0.00 2.44
751 802 5.188751 TCACTTCCAACAATTTCCCACTTTT 59.811 36.000 0.00 0.00 0.00 2.27
752 803 4.714308 TCACTTCCAACAATTTCCCACTTT 59.286 37.500 0.00 0.00 0.00 2.66
753 804 4.285863 TCACTTCCAACAATTTCCCACTT 58.714 39.130 0.00 0.00 0.00 3.16
754 805 3.909732 TCACTTCCAACAATTTCCCACT 58.090 40.909 0.00 0.00 0.00 4.00
755 806 4.142049 TGTTCACTTCCAACAATTTCCCAC 60.142 41.667 0.00 0.00 30.67 4.61
756 807 4.026744 TGTTCACTTCCAACAATTTCCCA 58.973 39.130 0.00 0.00 30.67 4.37
757 808 4.664150 TGTTCACTTCCAACAATTTCCC 57.336 40.909 0.00 0.00 30.67 3.97
758 809 5.660460 AGTTGTTCACTTCCAACAATTTCC 58.340 37.500 5.45 0.00 43.74 3.13
759 810 6.811170 TCAAGTTGTTCACTTCCAACAATTTC 59.189 34.615 2.11 0.00 44.60 2.17
760 811 6.696411 TCAAGTTGTTCACTTCCAACAATTT 58.304 32.000 2.11 1.54 44.60 1.82
761 812 6.279513 TCAAGTTGTTCACTTCCAACAATT 57.720 33.333 2.11 0.00 44.60 2.32
762 813 5.913137 TCAAGTTGTTCACTTCCAACAAT 57.087 34.783 2.11 0.00 44.60 2.71
763 814 5.242838 AGTTCAAGTTGTTCACTTCCAACAA 59.757 36.000 2.11 0.00 44.60 2.83
764 815 4.764823 AGTTCAAGTTGTTCACTTCCAACA 59.235 37.500 2.11 0.00 44.60 3.33
765 816 5.310720 AGTTCAAGTTGTTCACTTCCAAC 57.689 39.130 2.11 0.00 44.60 3.77
766 817 5.975693 AAGTTCAAGTTGTTCACTTCCAA 57.024 34.783 2.11 0.00 44.60 3.53
767 818 5.065988 GCTAAGTTCAAGTTGTTCACTTCCA 59.934 40.000 16.16 5.16 44.60 3.53
768 819 5.065988 TGCTAAGTTCAAGTTGTTCACTTCC 59.934 40.000 16.16 11.55 44.60 3.46
769 820 5.965918 GTGCTAAGTTCAAGTTGTTCACTTC 59.034 40.000 16.16 8.17 44.60 3.01
771 822 4.941263 TGTGCTAAGTTCAAGTTGTTCACT 59.059 37.500 2.11 1.39 37.30 3.41
772 823 5.229921 TGTGCTAAGTTCAAGTTGTTCAC 57.770 39.130 2.11 0.00 0.00 3.18
773 824 5.356751 ACATGTGCTAAGTTCAAGTTGTTCA 59.643 36.000 0.00 0.00 0.00 3.18
774 825 5.821204 ACATGTGCTAAGTTCAAGTTGTTC 58.179 37.500 0.00 0.00 0.00 3.18
775 826 5.835113 ACATGTGCTAAGTTCAAGTTGTT 57.165 34.783 0.00 0.00 0.00 2.83
776 827 5.581605 CAACATGTGCTAAGTTCAAGTTGT 58.418 37.500 0.00 0.00 36.61 3.32
791 842 2.665649 ATGCCAGAATGCAACATGTG 57.334 45.000 0.00 0.00 45.84 3.21
792 843 2.829720 AGAATGCCAGAATGCAACATGT 59.170 40.909 0.00 0.00 45.84 3.21
793 844 3.186909 CAGAATGCCAGAATGCAACATG 58.813 45.455 0.00 0.00 45.84 3.21
794 845 2.167693 CCAGAATGCCAGAATGCAACAT 59.832 45.455 0.00 0.00 45.84 2.71
795 846 1.546923 CCAGAATGCCAGAATGCAACA 59.453 47.619 0.00 0.00 45.84 3.33
796 847 1.738030 GCCAGAATGCCAGAATGCAAC 60.738 52.381 0.00 0.00 45.84 4.17
797 848 0.533491 GCCAGAATGCCAGAATGCAA 59.467 50.000 0.00 0.00 45.84 4.08
798 849 0.612453 TGCCAGAATGCCAGAATGCA 60.612 50.000 0.00 0.00 46.94 3.96
799 850 0.102481 CTGCCAGAATGCCAGAATGC 59.898 55.000 0.00 0.00 31.97 3.56
800 851 0.102481 GCTGCCAGAATGCCAGAATG 59.898 55.000 0.00 0.00 31.97 2.67
801 852 1.041447 GGCTGCCAGAATGCCAGAAT 61.041 55.000 15.17 0.00 45.46 2.40
802 853 1.679977 GGCTGCCAGAATGCCAGAA 60.680 57.895 15.17 0.00 45.46 3.02
803 854 2.044650 GGCTGCCAGAATGCCAGA 60.045 61.111 15.17 0.00 45.46 3.86
813 864 1.064537 TCAATAGCATTCTGGCTGCCA 60.065 47.619 21.96 21.96 45.44 4.92
814 865 1.683943 TCAATAGCATTCTGGCTGCC 58.316 50.000 12.87 12.87 45.44 4.85
815 866 2.882761 TGATCAATAGCATTCTGGCTGC 59.117 45.455 0.00 0.00 45.44 5.25
816 867 4.386711 TCTGATCAATAGCATTCTGGCTG 58.613 43.478 0.00 0.00 45.44 4.85
818 869 5.759963 CTTTCTGATCAATAGCATTCTGGC 58.240 41.667 0.00 0.00 0.00 4.85
819 870 5.531659 AGCTTTCTGATCAATAGCATTCTGG 59.468 40.000 19.53 0.00 34.37 3.86
820 871 6.621316 AGCTTTCTGATCAATAGCATTCTG 57.379 37.500 19.53 0.00 34.37 3.02
821 872 6.709846 GGTAGCTTTCTGATCAATAGCATTCT 59.290 38.462 19.53 6.95 34.37 2.40
822 873 6.072783 GGGTAGCTTTCTGATCAATAGCATTC 60.073 42.308 19.53 11.74 34.37 2.67
823 874 5.767168 GGGTAGCTTTCTGATCAATAGCATT 59.233 40.000 19.53 7.73 34.37 3.56
824 875 5.163163 TGGGTAGCTTTCTGATCAATAGCAT 60.163 40.000 19.53 10.82 34.37 3.79
825 876 4.164030 TGGGTAGCTTTCTGATCAATAGCA 59.836 41.667 19.53 8.03 34.37 3.49
826 877 4.708177 TGGGTAGCTTTCTGATCAATAGC 58.292 43.478 12.92 12.92 0.00 2.97
827 878 7.500227 TCAATTGGGTAGCTTTCTGATCAATAG 59.500 37.037 5.42 0.00 0.00 1.73
828 879 7.345691 TCAATTGGGTAGCTTTCTGATCAATA 58.654 34.615 5.42 0.00 0.00 1.90
829 880 6.189859 TCAATTGGGTAGCTTTCTGATCAAT 58.810 36.000 5.42 0.00 0.00 2.57
830 881 5.569355 TCAATTGGGTAGCTTTCTGATCAA 58.431 37.500 5.42 0.00 0.00 2.57
831 882 5.178096 TCAATTGGGTAGCTTTCTGATCA 57.822 39.130 5.42 0.00 0.00 2.92
832 883 5.824624 TGATCAATTGGGTAGCTTTCTGATC 59.175 40.000 5.42 14.87 38.80 2.92
833 884 5.759059 TGATCAATTGGGTAGCTTTCTGAT 58.241 37.500 5.42 0.00 0.00 2.90
834 885 5.045651 TCTGATCAATTGGGTAGCTTTCTGA 60.046 40.000 5.42 0.00 0.00 3.27
835 886 5.188434 TCTGATCAATTGGGTAGCTTTCTG 58.812 41.667 5.42 0.00 0.00 3.02
836 887 5.441718 TCTGATCAATTGGGTAGCTTTCT 57.558 39.130 5.42 0.00 0.00 2.52
837 888 5.824624 TGATCTGATCAATTGGGTAGCTTTC 59.175 40.000 17.56 0.00 36.11 2.62
838 889 5.759059 TGATCTGATCAATTGGGTAGCTTT 58.241 37.500 17.56 0.00 36.11 3.51
839 890 5.104193 ACTGATCTGATCAATTGGGTAGCTT 60.104 40.000 19.95 0.00 39.11 3.74
840 891 4.411540 ACTGATCTGATCAATTGGGTAGCT 59.588 41.667 19.95 0.00 39.11 3.32
841 892 4.712476 ACTGATCTGATCAATTGGGTAGC 58.288 43.478 19.95 0.00 39.11 3.58
842 893 5.757320 GTGACTGATCTGATCAATTGGGTAG 59.243 44.000 19.95 9.22 39.11 3.18
843 894 5.189539 TGTGACTGATCTGATCAATTGGGTA 59.810 40.000 19.95 3.00 39.11 3.69
844 895 4.019051 TGTGACTGATCTGATCAATTGGGT 60.019 41.667 19.95 14.00 39.11 4.51
845 896 4.520179 TGTGACTGATCTGATCAATTGGG 58.480 43.478 19.95 11.14 39.11 4.12
846 897 5.820947 TCATGTGACTGATCTGATCAATTGG 59.179 40.000 19.95 11.47 39.11 3.16
851 902 5.421374 AGAACTCATGTGACTGATCTGATCA 59.579 40.000 18.61 18.61 37.76 2.92
871 922 1.728971 CGTGATGAGTGCCAGAAGAAC 59.271 52.381 0.00 0.00 0.00 3.01
880 931 0.179205 GAAAGCAGCGTGATGAGTGC 60.179 55.000 0.00 0.00 36.10 4.40
902 954 1.063027 CACACCTATCGCATTGCACAG 59.937 52.381 9.69 2.07 0.00 3.66
925 977 7.924358 AAGTATATATGGTGGGTAACAGACA 57.076 36.000 0.00 0.00 39.74 3.41
928 980 9.886132 GGATAAAGTATATATGGTGGGTAACAG 57.114 37.037 0.00 0.00 39.74 3.16
929 981 8.533657 CGGATAAAGTATATATGGTGGGTAACA 58.466 37.037 0.00 0.00 39.74 2.41
930 982 8.534496 ACGGATAAAGTATATATGGTGGGTAAC 58.466 37.037 0.00 0.00 0.00 2.50
932 984 8.533657 CAACGGATAAAGTATATATGGTGGGTA 58.466 37.037 0.00 0.00 0.00 3.69
962 1024 3.285484 TGGTACGTACATCTCTTCTCCC 58.715 50.000 26.02 5.83 0.00 4.30
978 1040 1.135888 GCGAATCAAACGGGTTGGTAC 60.136 52.381 5.85 0.00 37.85 3.34
979 1041 1.158434 GCGAATCAAACGGGTTGGTA 58.842 50.000 5.85 0.00 37.85 3.25
981 1043 1.211709 GGCGAATCAAACGGGTTGG 59.788 57.895 5.85 0.00 37.85 3.77
982 1044 0.525761 ATGGCGAATCAAACGGGTTG 59.474 50.000 0.00 0.00 38.71 3.77
983 1045 0.525761 CATGGCGAATCAAACGGGTT 59.474 50.000 0.00 0.00 0.00 4.11
984 1046 1.312371 CCATGGCGAATCAAACGGGT 61.312 55.000 0.00 0.00 0.00 5.28
985 1047 1.433064 CCATGGCGAATCAAACGGG 59.567 57.895 0.00 0.00 0.00 5.28
987 1049 1.226660 GGCCATGGCGAATCAAACG 60.227 57.895 29.90 0.00 43.06 3.60
988 1050 4.812814 GGCCATGGCGAATCAAAC 57.187 55.556 29.90 10.13 43.06 2.93
1047 1115 1.713937 CGACAACACTGTTGCAGCCA 61.714 55.000 19.86 0.00 35.30 4.75
1048 1116 1.009675 CGACAACACTGTTGCAGCC 60.010 57.895 19.86 7.67 35.30 4.85
1105 1173 1.005037 AAGACGACGCCATGCAGAA 60.005 52.632 0.00 0.00 0.00 3.02
1119 1187 1.014564 CCGGGCACGAAGAAGAAGAC 61.015 60.000 11.66 0.00 44.60 3.01
1155 1223 2.283894 TCCTCCTTGAGCGGCTCA 60.284 61.111 27.76 27.76 38.87 4.26
1156 1224 2.055042 TCTCCTCCTTGAGCGGCTC 61.055 63.158 22.78 22.78 32.22 4.70
1159 1227 1.954362 CTGGTCTCCTCCTTGAGCGG 61.954 65.000 0.00 0.00 33.88 5.52
1174 1242 0.973632 TCCTTGTACATCACGCTGGT 59.026 50.000 0.00 0.00 0.00 4.00
1407 1586 3.329542 GATGGGCTTCCACCGCTGA 62.330 63.158 0.00 0.00 44.44 4.26
1632 1836 4.174009 CCACGACTAACAACACCATAGAG 58.826 47.826 0.00 0.00 0.00 2.43
1636 1840 1.271163 CCCCACGACTAACAACACCAT 60.271 52.381 0.00 0.00 0.00 3.55
1730 1966 6.129009 GCTGACTAAGAAATGCAAACACAATG 60.129 38.462 0.00 0.00 0.00 2.82
1770 2034 6.702329 AGACAGGGACAACAAATAGAGTAAG 58.298 40.000 0.00 0.00 0.00 2.34
1778 2042 4.285863 TGGAAAAGACAGGGACAACAAAT 58.714 39.130 0.00 0.00 0.00 2.32
1782 2046 3.486383 TCATGGAAAAGACAGGGACAAC 58.514 45.455 0.00 0.00 0.00 3.32
1938 2219 3.502979 GTGGTAAAAAGGTCGCCAATGTA 59.497 43.478 0.00 0.00 0.00 2.29
1960 2244 3.070018 GAGAGTGTGTGTGAGGATTTGG 58.930 50.000 0.00 0.00 0.00 3.28
1983 2277 2.584965 AGAGAGTGAGGAAGATGGAGGA 59.415 50.000 0.00 0.00 0.00 3.71
2017 2311 5.714863 AGAGAGAGAGAGAGAGAGAGAGAT 58.285 45.833 0.00 0.00 0.00 2.75
2018 2312 5.103728 AGAGAGAGAGAGAGAGAGAGAGAGA 60.104 48.000 0.00 0.00 0.00 3.10
2047 2341 5.874810 AGATGGATATGTGTGTGTGTGTTAC 59.125 40.000 0.00 0.00 0.00 2.50
2117 2419 3.490896 CCATACTGTTATGCACTAGCGTG 59.509 47.826 0.00 0.00 46.23 5.34
2118 2420 3.383505 TCCATACTGTTATGCACTAGCGT 59.616 43.478 0.00 0.00 46.23 5.07
2119 2421 3.977427 TCCATACTGTTATGCACTAGCG 58.023 45.455 0.00 0.00 46.23 4.26
2302 2608 3.234630 CTTGAAGGACCCGGCGTGA 62.235 63.158 6.01 0.00 0.00 4.35
2482 2794 2.531206 CGTTCTTGATTCTCGAGACCC 58.469 52.381 16.36 10.38 36.67 4.46
2485 2797 2.476352 CGAGCGTTCTTGATTCTCGAGA 60.476 50.000 12.08 12.08 46.59 4.04


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.