Multiple sequence alignment - TraesCS3A01G518900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G518900 chr3A 100.000 2547 0 0 1 2547 736083514 736080968 0.000000e+00 4704
1 TraesCS3A01G518900 chr3A 83.951 162 23 3 410 569 424127442 424127602 4.390000e-33 152
2 TraesCS3A01G518900 chr6A 98.686 1978 23 2 573 2547 617222869 617220892 0.000000e+00 3506
3 TraesCS3A01G518900 chr6A 98.339 1987 27 5 565 2547 533982329 533980345 0.000000e+00 3482
4 TraesCS3A01G518900 chr4A 98.587 1981 24 2 571 2547 36562911 36564891 0.000000e+00 3500
5 TraesCS3A01G518900 chr4A 88.636 176 19 1 395 569 41401362 41401537 1.980000e-51 213
6 TraesCS3A01G518900 chr4A 88.344 163 18 1 234 395 664183157 664183319 7.190000e-46 195
7 TraesCS3A01G518900 chr4A 82.759 232 11 14 6 236 41401163 41401366 2.010000e-41 180
8 TraesCS3A01G518900 chr3B 98.434 1980 27 3 571 2547 812516876 812514898 0.000000e+00 3482
9 TraesCS3A01G518900 chr4B 98.434 1979 26 4 572 2547 578529983 578528007 0.000000e+00 3478
10 TraesCS3A01G518900 chr1B 98.336 1983 29 3 568 2547 42162343 42160362 0.000000e+00 3476
11 TraesCS3A01G518900 chr1B 98.186 1985 31 4 566 2547 7851070 7853052 0.000000e+00 3461
12 TraesCS3A01G518900 chr1B 86.747 166 21 1 234 398 521219539 521219374 1.560000e-42 183
13 TraesCS3A01G518900 chr7A 98.334 1981 27 3 572 2547 538301637 538303616 0.000000e+00 3470
14 TraesCS3A01G518900 chr7A 84.255 235 25 7 5 236 117361430 117361205 4.270000e-53 219
15 TraesCS3A01G518900 chr7A 83.761 117 16 3 394 508 40059698 40059813 9.640000e-20 108
16 TraesCS3A01G518900 chr2A 97.997 1997 33 6 557 2547 751250592 751248597 0.000000e+00 3459
17 TraesCS3A01G518900 chr5D 87.117 163 19 2 234 395 513583707 513583546 1.560000e-42 183
18 TraesCS3A01G518900 chr5A 86.471 170 19 3 233 399 558675660 558675492 1.560000e-42 183
19 TraesCS3A01G518900 chr1D 85.714 175 22 3 234 406 462301517 462301344 5.600000e-42 182
20 TraesCS3A01G518900 chr1D 87.742 155 17 2 245 398 387944932 387944779 2.010000e-41 180
21 TraesCS3A01G518900 chr1A 85.465 172 23 2 234 403 71070758 71070587 7.240000e-41 178
22 TraesCS3A01G518900 chr1A 84.615 117 15 3 394 508 75352847 75352962 2.070000e-21 113
23 TraesCS3A01G518900 chr2D 86.420 162 21 1 235 395 336511295 336511134 2.600000e-40 176
24 TraesCS3A01G518900 chr3D 84.483 174 24 3 224 395 495315041 495315213 4.360000e-38 169


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G518900 chr3A 736080968 736083514 2546 True 4704 4704 100.000 1 2547 1 chr3A.!!$R1 2546
1 TraesCS3A01G518900 chr6A 617220892 617222869 1977 True 3506 3506 98.686 573 2547 1 chr6A.!!$R2 1974
2 TraesCS3A01G518900 chr6A 533980345 533982329 1984 True 3482 3482 98.339 565 2547 1 chr6A.!!$R1 1982
3 TraesCS3A01G518900 chr4A 36562911 36564891 1980 False 3500 3500 98.587 571 2547 1 chr4A.!!$F1 1976
4 TraesCS3A01G518900 chr3B 812514898 812516876 1978 True 3482 3482 98.434 571 2547 1 chr3B.!!$R1 1976
5 TraesCS3A01G518900 chr4B 578528007 578529983 1976 True 3478 3478 98.434 572 2547 1 chr4B.!!$R1 1975
6 TraesCS3A01G518900 chr1B 42160362 42162343 1981 True 3476 3476 98.336 568 2547 1 chr1B.!!$R1 1979
7 TraesCS3A01G518900 chr1B 7851070 7853052 1982 False 3461 3461 98.186 566 2547 1 chr1B.!!$F1 1981
8 TraesCS3A01G518900 chr7A 538301637 538303616 1979 False 3470 3470 98.334 572 2547 1 chr7A.!!$F2 1975
9 TraesCS3A01G518900 chr2A 751248597 751250592 1995 True 3459 3459 97.997 557 2547 1 chr2A.!!$R1 1990

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
157 158 0.026803 CGCTTGATGTTCTAAGGCGC 59.973 55.0 0.00 0.0 0.0 6.53 F
171 172 0.037232 AGGCGCCACTCTGAAACTAC 60.037 55.0 31.54 0.0 0.0 2.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1134 1139 0.663269 CTCGCTGCACACGTAGAACA 60.663 55.000 0.0 0.0 0.0 3.18 R
1751 1760 1.344114 GAATTTGGCCCAAGAGCAACA 59.656 47.619 0.0 0.0 0.0 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.423732 CTTTTGCTAACCACATATGCACC 58.576 43.478 1.58 0.00 33.13 5.01
23 24 2.797177 TGCTAACCACATATGCACCA 57.203 45.000 1.58 0.00 0.00 4.17
24 25 2.364632 TGCTAACCACATATGCACCAC 58.635 47.619 1.58 0.00 0.00 4.16
25 26 2.290577 TGCTAACCACATATGCACCACA 60.291 45.455 1.58 0.00 0.00 4.17
26 27 2.951642 GCTAACCACATATGCACCACAT 59.048 45.455 1.58 0.00 43.18 3.21
27 28 3.381272 GCTAACCACATATGCACCACATT 59.619 43.478 1.58 0.00 40.38 2.71
28 29 3.872511 AACCACATATGCACCACATTG 57.127 42.857 1.58 0.00 40.38 2.82
29 30 3.084536 ACCACATATGCACCACATTGA 57.915 42.857 1.58 0.00 40.38 2.57
30 31 3.634504 ACCACATATGCACCACATTGAT 58.365 40.909 1.58 0.00 40.38 2.57
31 32 3.382227 ACCACATATGCACCACATTGATG 59.618 43.478 1.58 0.00 40.38 3.07
32 33 3.633065 CCACATATGCACCACATTGATGA 59.367 43.478 1.58 0.00 40.38 2.92
33 34 4.279922 CCACATATGCACCACATTGATGAT 59.720 41.667 1.58 0.00 40.38 2.45
34 35 5.219633 CACATATGCACCACATTGATGATG 58.780 41.667 1.58 0.00 40.38 3.07
35 36 5.009210 CACATATGCACCACATTGATGATGA 59.991 40.000 1.58 0.00 40.38 2.92
36 37 5.240844 ACATATGCACCACATTGATGATGAG 59.759 40.000 1.58 0.00 40.38 2.90
41 42 1.600957 CCACATTGATGATGAGGTCGC 59.399 52.381 0.00 0.00 40.45 5.19
42 43 1.259770 CACATTGATGATGAGGTCGCG 59.740 52.381 0.00 0.00 39.15 5.87
43 44 0.234106 CATTGATGATGAGGTCGCGC 59.766 55.000 0.00 0.00 38.03 6.86
44 45 1.217585 ATTGATGATGAGGTCGCGCG 61.218 55.000 26.76 26.76 0.00 6.86
45 46 2.278857 GATGATGAGGTCGCGCGT 60.279 61.111 30.98 11.13 0.00 6.01
46 47 2.580470 GATGATGAGGTCGCGCGTG 61.580 63.158 30.98 14.79 0.00 5.34
47 48 2.936829 GATGATGAGGTCGCGCGTGA 62.937 60.000 30.98 20.10 0.00 4.35
48 49 2.943680 ATGATGAGGTCGCGCGTGAG 62.944 60.000 30.98 7.37 0.00 3.51
49 50 3.396911 GATGAGGTCGCGCGTGAGA 62.397 63.158 30.98 7.39 0.00 3.27
50 51 2.669808 GATGAGGTCGCGCGTGAGAT 62.670 60.000 30.98 14.71 0.00 2.75
51 52 2.202623 GAGGTCGCGCGTGAGATT 60.203 61.111 30.98 11.47 0.00 2.40
52 53 2.202623 AGGTCGCGCGTGAGATTC 60.203 61.111 30.98 11.19 0.00 2.52
53 54 3.607987 GGTCGCGCGTGAGATTCG 61.608 66.667 30.98 8.29 0.00 3.34
54 55 2.874780 GTCGCGCGTGAGATTCGT 60.875 61.111 30.98 0.00 0.00 3.85
55 56 2.126618 TCGCGCGTGAGATTCGTT 60.127 55.556 30.98 0.00 0.00 3.85
56 57 2.018670 CGCGCGTGAGATTCGTTG 59.981 61.111 24.19 0.00 0.00 4.10
57 58 2.395690 GCGCGTGAGATTCGTTGG 59.604 61.111 8.43 0.00 0.00 3.77
58 59 2.380410 GCGCGTGAGATTCGTTGGT 61.380 57.895 8.43 0.00 0.00 3.67
59 60 1.416049 CGCGTGAGATTCGTTGGTG 59.584 57.895 0.00 0.00 0.00 4.17
60 61 1.006825 CGCGTGAGATTCGTTGGTGA 61.007 55.000 0.00 0.00 0.00 4.02
61 62 1.144969 GCGTGAGATTCGTTGGTGAA 58.855 50.000 0.00 0.00 0.00 3.18
62 63 1.136336 GCGTGAGATTCGTTGGTGAAC 60.136 52.381 0.00 0.00 0.00 3.18
63 64 2.131972 CGTGAGATTCGTTGGTGAACA 58.868 47.619 0.00 0.00 31.78 3.18
64 65 2.736721 CGTGAGATTCGTTGGTGAACAT 59.263 45.455 0.00 0.00 31.78 2.71
65 66 3.924073 CGTGAGATTCGTTGGTGAACATA 59.076 43.478 0.00 0.00 31.78 2.29
66 67 4.201589 CGTGAGATTCGTTGGTGAACATAC 60.202 45.833 0.00 0.00 31.78 2.39
67 68 4.929808 GTGAGATTCGTTGGTGAACATACT 59.070 41.667 0.00 0.00 31.78 2.12
68 69 5.062308 GTGAGATTCGTTGGTGAACATACTC 59.938 44.000 0.00 0.00 31.78 2.59
69 70 4.504858 AGATTCGTTGGTGAACATACTCC 58.495 43.478 0.00 0.00 31.78 3.85
70 71 3.755112 TTCGTTGGTGAACATACTCCA 57.245 42.857 0.00 0.00 31.78 3.86
71 72 3.313012 TCGTTGGTGAACATACTCCAG 57.687 47.619 0.00 0.00 35.38 3.86
72 73 2.028476 TCGTTGGTGAACATACTCCAGG 60.028 50.000 0.00 0.00 35.38 4.45
73 74 2.028476 CGTTGGTGAACATACTCCAGGA 60.028 50.000 0.00 0.00 35.38 3.86
74 75 3.335579 GTTGGTGAACATACTCCAGGAC 58.664 50.000 0.00 0.00 35.38 3.85
75 76 1.548719 TGGTGAACATACTCCAGGACG 59.451 52.381 0.00 0.00 0.00 4.79
76 77 1.822990 GGTGAACATACTCCAGGACGA 59.177 52.381 0.00 0.00 0.00 4.20
77 78 2.159226 GGTGAACATACTCCAGGACGAG 60.159 54.545 0.00 0.00 35.88 4.18
78 79 2.753452 GTGAACATACTCCAGGACGAGA 59.247 50.000 0.00 0.00 33.83 4.04
79 80 3.381908 GTGAACATACTCCAGGACGAGAT 59.618 47.826 0.00 0.00 33.83 2.75
80 81 4.579340 GTGAACATACTCCAGGACGAGATA 59.421 45.833 0.00 0.00 33.83 1.98
81 82 5.067413 GTGAACATACTCCAGGACGAGATAA 59.933 44.000 0.00 0.00 33.83 1.75
82 83 5.299531 TGAACATACTCCAGGACGAGATAAG 59.700 44.000 0.00 0.00 33.83 1.73
83 84 5.050126 ACATACTCCAGGACGAGATAAGA 57.950 43.478 0.00 0.00 33.83 2.10
84 85 5.446860 ACATACTCCAGGACGAGATAAGAA 58.553 41.667 0.00 0.00 33.83 2.52
85 86 6.071984 ACATACTCCAGGACGAGATAAGAAT 58.928 40.000 0.00 0.00 33.83 2.40
86 87 6.551601 ACATACTCCAGGACGAGATAAGAATT 59.448 38.462 0.00 0.00 33.83 2.17
87 88 5.941555 ACTCCAGGACGAGATAAGAATTT 57.058 39.130 0.00 0.00 33.83 1.82
88 89 6.301169 ACTCCAGGACGAGATAAGAATTTT 57.699 37.500 0.00 0.00 33.83 1.82
89 90 6.712276 ACTCCAGGACGAGATAAGAATTTTT 58.288 36.000 0.00 0.00 33.83 1.94
90 91 7.848128 ACTCCAGGACGAGATAAGAATTTTTA 58.152 34.615 0.00 0.00 33.83 1.52
91 92 8.319146 ACTCCAGGACGAGATAAGAATTTTTAA 58.681 33.333 0.00 0.00 33.83 1.52
92 93 9.162764 CTCCAGGACGAGATAAGAATTTTTAAA 57.837 33.333 0.00 0.00 30.97 1.52
93 94 9.509956 TCCAGGACGAGATAAGAATTTTTAAAA 57.490 29.630 0.00 0.00 0.00 1.52
94 95 9.774742 CCAGGACGAGATAAGAATTTTTAAAAG 57.225 33.333 0.14 0.00 0.00 2.27
95 96 9.774742 CAGGACGAGATAAGAATTTTTAAAAGG 57.225 33.333 0.14 0.00 0.00 3.11
96 97 8.459635 AGGACGAGATAAGAATTTTTAAAAGGC 58.540 33.333 0.14 0.00 0.00 4.35
97 98 7.701078 GGACGAGATAAGAATTTTTAAAAGGCC 59.299 37.037 0.00 0.00 0.00 5.19
98 99 8.117813 ACGAGATAAGAATTTTTAAAAGGCCA 57.882 30.769 5.01 0.00 0.00 5.36
99 100 8.749354 ACGAGATAAGAATTTTTAAAAGGCCAT 58.251 29.630 5.01 0.00 0.00 4.40
100 101 9.586435 CGAGATAAGAATTTTTAAAAGGCCATT 57.414 29.630 5.01 0.00 0.00 3.16
105 106 8.759481 AAGAATTTTTAAAAGGCCATTTGGAA 57.241 26.923 16.08 7.91 37.39 3.53
106 107 8.759481 AGAATTTTTAAAAGGCCATTTGGAAA 57.241 26.923 16.08 15.03 37.39 3.13
107 108 9.365906 AGAATTTTTAAAAGGCCATTTGGAAAT 57.634 25.926 16.08 16.36 37.39 2.17
108 109 9.979578 GAATTTTTAAAAGGCCATTTGGAAATT 57.020 25.926 25.23 25.23 37.39 1.82
109 110 9.979578 AATTTTTAAAAGGCCATTTGGAAATTC 57.020 25.926 22.38 0.00 37.39 2.17
110 111 6.793492 TTTAAAAGGCCATTTGGAAATTCG 57.207 33.333 16.08 0.00 37.39 3.34
111 112 4.615588 AAAAGGCCATTTGGAAATTCGA 57.384 36.364 5.01 0.00 37.39 3.71
112 113 4.615588 AAAGGCCATTTGGAAATTCGAA 57.384 36.364 5.01 0.00 37.39 3.71
113 114 3.874392 AGGCCATTTGGAAATTCGAAG 57.126 42.857 5.01 0.00 37.39 3.79
114 115 3.430453 AGGCCATTTGGAAATTCGAAGA 58.570 40.909 5.01 0.00 37.39 2.87
115 116 3.193479 AGGCCATTTGGAAATTCGAAGAC 59.807 43.478 5.01 0.00 33.76 3.01
116 117 3.511699 GCCATTTGGAAATTCGAAGACC 58.488 45.455 3.35 7.49 33.76 3.85
117 118 3.193479 GCCATTTGGAAATTCGAAGACCT 59.807 43.478 3.35 0.00 33.76 3.85
118 119 4.737054 CCATTTGGAAATTCGAAGACCTG 58.263 43.478 3.35 2.19 33.76 4.00
119 120 4.458989 CCATTTGGAAATTCGAAGACCTGA 59.541 41.667 3.35 1.17 33.76 3.86
120 121 5.393962 CATTTGGAAATTCGAAGACCTGAC 58.606 41.667 3.35 0.00 34.32 3.51
121 122 3.762407 TGGAAATTCGAAGACCTGACA 57.238 42.857 3.35 0.00 34.32 3.58
122 123 3.399330 TGGAAATTCGAAGACCTGACAC 58.601 45.455 3.35 0.00 34.32 3.67
123 124 3.071023 TGGAAATTCGAAGACCTGACACT 59.929 43.478 3.35 0.00 34.32 3.55
124 125 3.433615 GGAAATTCGAAGACCTGACACTG 59.566 47.826 3.35 0.00 34.32 3.66
125 126 4.307432 GAAATTCGAAGACCTGACACTGA 58.693 43.478 3.35 0.00 34.32 3.41
126 127 2.795175 TTCGAAGACCTGACACTGAC 57.205 50.000 0.00 0.00 34.32 3.51
127 128 1.687563 TCGAAGACCTGACACTGACA 58.312 50.000 0.00 0.00 0.00 3.58
128 129 2.028876 TCGAAGACCTGACACTGACAA 58.971 47.619 0.00 0.00 0.00 3.18
129 130 2.128035 CGAAGACCTGACACTGACAAC 58.872 52.381 0.00 0.00 0.00 3.32
130 131 2.128035 GAAGACCTGACACTGACAACG 58.872 52.381 0.00 0.00 0.00 4.10
131 132 1.112113 AGACCTGACACTGACAACGT 58.888 50.000 0.00 0.00 0.00 3.99
132 133 1.480954 AGACCTGACACTGACAACGTT 59.519 47.619 0.00 0.00 0.00 3.99
133 134 2.691526 AGACCTGACACTGACAACGTTA 59.308 45.455 0.00 0.00 0.00 3.18
134 135 3.321111 AGACCTGACACTGACAACGTTAT 59.679 43.478 0.00 0.00 0.00 1.89
135 136 4.056050 GACCTGACACTGACAACGTTATT 58.944 43.478 0.00 0.00 0.00 1.40
136 137 5.010314 AGACCTGACACTGACAACGTTATTA 59.990 40.000 0.00 0.00 0.00 0.98
137 138 4.986659 ACCTGACACTGACAACGTTATTAC 59.013 41.667 0.00 0.00 0.00 1.89
138 139 4.387862 CCTGACACTGACAACGTTATTACC 59.612 45.833 0.00 0.00 0.00 2.85
139 140 3.982701 TGACACTGACAACGTTATTACCG 59.017 43.478 0.00 0.00 0.00 4.02
140 141 2.733026 ACACTGACAACGTTATTACCGC 59.267 45.455 0.00 0.00 0.00 5.68
141 142 2.991190 CACTGACAACGTTATTACCGCT 59.009 45.455 0.00 0.00 0.00 5.52
142 143 3.430895 CACTGACAACGTTATTACCGCTT 59.569 43.478 0.00 0.00 0.00 4.68
143 144 3.430895 ACTGACAACGTTATTACCGCTTG 59.569 43.478 0.00 0.00 0.00 4.01
144 145 3.651206 TGACAACGTTATTACCGCTTGA 58.349 40.909 0.00 0.00 0.00 3.02
145 146 4.247258 TGACAACGTTATTACCGCTTGAT 58.753 39.130 0.00 0.00 0.00 2.57
146 147 4.092237 TGACAACGTTATTACCGCTTGATG 59.908 41.667 0.00 0.00 0.00 3.07
147 148 3.998341 ACAACGTTATTACCGCTTGATGT 59.002 39.130 0.00 0.00 0.00 3.06
148 149 4.453136 ACAACGTTATTACCGCTTGATGTT 59.547 37.500 0.00 0.00 0.00 2.71
149 150 4.852609 ACGTTATTACCGCTTGATGTTC 57.147 40.909 0.00 0.00 0.00 3.18
150 151 4.501071 ACGTTATTACCGCTTGATGTTCT 58.499 39.130 0.00 0.00 0.00 3.01
151 152 5.653507 ACGTTATTACCGCTTGATGTTCTA 58.346 37.500 0.00 0.00 0.00 2.10
152 153 6.101332 ACGTTATTACCGCTTGATGTTCTAA 58.899 36.000 0.00 0.00 0.00 2.10
153 154 6.255020 ACGTTATTACCGCTTGATGTTCTAAG 59.745 38.462 0.00 0.00 0.00 2.18
154 155 6.292168 CGTTATTACCGCTTGATGTTCTAAGG 60.292 42.308 0.00 0.00 0.00 2.69
155 156 1.739067 ACCGCTTGATGTTCTAAGGC 58.261 50.000 0.00 0.00 0.00 4.35
156 157 0.652592 CCGCTTGATGTTCTAAGGCG 59.347 55.000 0.00 0.00 0.00 5.52
157 158 0.026803 CGCTTGATGTTCTAAGGCGC 59.973 55.000 0.00 0.00 0.00 6.53
158 159 0.378610 GCTTGATGTTCTAAGGCGCC 59.621 55.000 21.89 21.89 0.00 6.53
159 160 1.737838 CTTGATGTTCTAAGGCGCCA 58.262 50.000 31.54 7.98 0.00 5.69
160 161 1.398390 CTTGATGTTCTAAGGCGCCAC 59.602 52.381 31.54 18.42 0.00 5.01
161 162 0.613260 TGATGTTCTAAGGCGCCACT 59.387 50.000 31.54 18.18 0.00 4.00
162 163 1.291132 GATGTTCTAAGGCGCCACTC 58.709 55.000 31.54 12.48 0.00 3.51
163 164 0.905357 ATGTTCTAAGGCGCCACTCT 59.095 50.000 31.54 12.51 0.00 3.24
164 165 0.037326 TGTTCTAAGGCGCCACTCTG 60.037 55.000 31.54 13.66 0.00 3.35
165 166 0.246635 GTTCTAAGGCGCCACTCTGA 59.753 55.000 31.54 15.86 0.00 3.27
166 167 0.973632 TTCTAAGGCGCCACTCTGAA 59.026 50.000 31.54 20.61 0.00 3.02
167 168 0.973632 TCTAAGGCGCCACTCTGAAA 59.026 50.000 31.54 1.91 0.00 2.69
168 169 1.079503 CTAAGGCGCCACTCTGAAAC 58.920 55.000 31.54 0.00 0.00 2.78
169 170 0.685097 TAAGGCGCCACTCTGAAACT 59.315 50.000 31.54 0.00 0.00 2.66
170 171 0.685097 AAGGCGCCACTCTGAAACTA 59.315 50.000 31.54 0.00 0.00 2.24
171 172 0.037232 AGGCGCCACTCTGAAACTAC 60.037 55.000 31.54 0.00 0.00 2.73
172 173 0.037232 GGCGCCACTCTGAAACTACT 60.037 55.000 24.80 0.00 0.00 2.57
173 174 1.608283 GGCGCCACTCTGAAACTACTT 60.608 52.381 24.80 0.00 0.00 2.24
174 175 2.143925 GCGCCACTCTGAAACTACTTT 58.856 47.619 0.00 0.00 0.00 2.66
175 176 2.096218 GCGCCACTCTGAAACTACTTTG 60.096 50.000 0.00 0.00 0.00 2.77
176 177 2.480419 CGCCACTCTGAAACTACTTTGG 59.520 50.000 0.00 0.00 0.00 3.28
177 178 2.226674 GCCACTCTGAAACTACTTTGGC 59.773 50.000 0.00 0.00 41.41 4.52
178 179 2.814336 CCACTCTGAAACTACTTTGGCC 59.186 50.000 0.00 0.00 0.00 5.36
179 180 3.476552 CACTCTGAAACTACTTTGGCCA 58.523 45.455 0.00 0.00 0.00 5.36
180 181 3.882888 CACTCTGAAACTACTTTGGCCAA 59.117 43.478 16.05 16.05 0.00 4.52
181 182 4.023707 CACTCTGAAACTACTTTGGCCAAG 60.024 45.833 19.48 15.02 38.64 3.61
182 183 3.486383 TCTGAAACTACTTTGGCCAAGG 58.514 45.455 24.95 24.95 36.72 3.61
183 184 1.960689 TGAAACTACTTTGGCCAAGGC 59.039 47.619 26.31 10.25 36.72 4.35
193 194 2.575461 GCCAAGGCCAAGCATGTC 59.425 61.111 5.01 0.00 34.56 3.06
194 195 2.277591 GCCAAGGCCAAGCATGTCA 61.278 57.895 5.01 0.00 34.56 3.58
195 196 1.588082 CCAAGGCCAAGCATGTCAC 59.412 57.895 5.01 0.00 0.00 3.67
196 197 0.896940 CCAAGGCCAAGCATGTCACT 60.897 55.000 5.01 0.00 0.00 3.41
197 198 0.242825 CAAGGCCAAGCATGTCACTG 59.757 55.000 5.01 0.00 0.00 3.66
198 199 1.530013 AAGGCCAAGCATGTCACTGC 61.530 55.000 5.01 0.00 42.62 4.40
199 200 2.270257 GGCCAAGCATGTCACTGCA 61.270 57.895 0.00 0.00 44.77 4.41
200 201 1.080974 GCCAAGCATGTCACTGCAC 60.081 57.895 9.09 0.00 44.77 4.57
201 202 1.582968 CCAAGCATGTCACTGCACC 59.417 57.895 9.09 0.00 44.77 5.01
202 203 0.892358 CCAAGCATGTCACTGCACCT 60.892 55.000 9.09 0.00 44.77 4.00
203 204 0.520404 CAAGCATGTCACTGCACCTC 59.480 55.000 9.09 0.00 44.77 3.85
204 205 0.952497 AAGCATGTCACTGCACCTCG 60.952 55.000 9.09 0.00 44.77 4.63
205 206 3.031964 GCATGTCACTGCACCTCGC 62.032 63.158 0.00 0.00 41.87 5.03
206 207 2.046892 ATGTCACTGCACCTCGCC 60.047 61.111 0.00 0.00 41.33 5.54
207 208 2.587247 ATGTCACTGCACCTCGCCT 61.587 57.895 0.00 0.00 41.33 5.52
208 209 1.257750 ATGTCACTGCACCTCGCCTA 61.258 55.000 0.00 0.00 41.33 3.93
209 210 1.153745 GTCACTGCACCTCGCCTAG 60.154 63.158 0.00 0.00 41.33 3.02
210 211 1.304134 TCACTGCACCTCGCCTAGA 60.304 57.895 0.00 0.00 41.33 2.43
211 212 1.153745 CACTGCACCTCGCCTAGAC 60.154 63.158 0.00 0.00 41.33 2.59
212 213 2.352032 ACTGCACCTCGCCTAGACC 61.352 63.158 0.00 0.00 41.33 3.85
213 214 2.037367 TGCACCTCGCCTAGACCT 59.963 61.111 0.00 0.00 41.33 3.85
214 215 0.752009 CTGCACCTCGCCTAGACCTA 60.752 60.000 0.00 0.00 41.33 3.08
215 216 0.752009 TGCACCTCGCCTAGACCTAG 60.752 60.000 0.00 0.00 41.33 3.02
216 217 2.034607 CACCTCGCCTAGACCTAGC 58.965 63.158 0.00 0.00 31.95 3.42
217 218 0.752009 CACCTCGCCTAGACCTAGCA 60.752 60.000 0.00 0.00 31.95 3.49
218 219 0.186386 ACCTCGCCTAGACCTAGCAT 59.814 55.000 0.00 0.00 31.95 3.79
219 220 0.600557 CCTCGCCTAGACCTAGCATG 59.399 60.000 0.00 0.00 31.95 4.06
220 221 1.610363 CTCGCCTAGACCTAGCATGA 58.390 55.000 0.00 0.00 31.95 3.07
221 222 1.268352 CTCGCCTAGACCTAGCATGAC 59.732 57.143 0.00 0.00 31.95 3.06
222 223 0.315568 CGCCTAGACCTAGCATGACC 59.684 60.000 0.00 0.00 31.95 4.02
223 224 1.414158 GCCTAGACCTAGCATGACCA 58.586 55.000 0.00 0.00 31.95 4.02
224 225 1.342819 GCCTAGACCTAGCATGACCAG 59.657 57.143 0.00 0.00 31.95 4.00
225 226 1.967066 CCTAGACCTAGCATGACCAGG 59.033 57.143 0.00 1.10 35.45 4.45
226 227 2.424957 CCTAGACCTAGCATGACCAGGA 60.425 54.545 12.98 0.00 33.44 3.86
227 228 2.254152 AGACCTAGCATGACCAGGAA 57.746 50.000 12.98 0.00 33.44 3.36
228 229 2.114616 AGACCTAGCATGACCAGGAAG 58.885 52.381 12.98 0.00 33.44 3.46
229 230 2.111384 GACCTAGCATGACCAGGAAGA 58.889 52.381 12.98 0.00 33.44 2.87
230 231 1.834263 ACCTAGCATGACCAGGAAGAC 59.166 52.381 12.98 0.00 33.44 3.01
231 232 1.833630 CCTAGCATGACCAGGAAGACA 59.166 52.381 0.00 0.00 0.00 3.41
232 233 2.237143 CCTAGCATGACCAGGAAGACAA 59.763 50.000 0.00 0.00 0.00 3.18
233 234 2.957402 AGCATGACCAGGAAGACAAA 57.043 45.000 0.00 0.00 0.00 2.83
234 235 3.446442 AGCATGACCAGGAAGACAAAT 57.554 42.857 0.00 0.00 0.00 2.32
235 236 4.574674 AGCATGACCAGGAAGACAAATA 57.425 40.909 0.00 0.00 0.00 1.40
236 237 4.265073 AGCATGACCAGGAAGACAAATAC 58.735 43.478 0.00 0.00 0.00 1.89
237 238 4.018960 AGCATGACCAGGAAGACAAATACT 60.019 41.667 0.00 0.00 0.00 2.12
238 239 4.333926 GCATGACCAGGAAGACAAATACTC 59.666 45.833 0.00 0.00 0.00 2.59
239 240 4.553330 TGACCAGGAAGACAAATACTCC 57.447 45.455 0.00 0.00 0.00 3.85
240 241 3.263425 TGACCAGGAAGACAAATACTCCC 59.737 47.826 0.00 0.00 0.00 4.30
241 242 3.519913 GACCAGGAAGACAAATACTCCCT 59.480 47.826 0.00 0.00 0.00 4.20
242 243 3.264450 ACCAGGAAGACAAATACTCCCTG 59.736 47.826 0.00 0.00 39.38 4.45
243 244 3.274288 CAGGAAGACAAATACTCCCTGC 58.726 50.000 0.00 0.00 34.15 4.85
244 245 2.093447 AGGAAGACAAATACTCCCTGCG 60.093 50.000 0.00 0.00 0.00 5.18
245 246 2.354805 GGAAGACAAATACTCCCTGCGT 60.355 50.000 0.00 0.00 0.00 5.24
246 247 3.335579 GAAGACAAATACTCCCTGCGTT 58.664 45.455 0.00 0.00 0.00 4.84
247 248 2.973945 AGACAAATACTCCCTGCGTTC 58.026 47.619 0.00 0.00 0.00 3.95
248 249 2.567615 AGACAAATACTCCCTGCGTTCT 59.432 45.455 0.00 0.00 0.00 3.01
249 250 3.008049 AGACAAATACTCCCTGCGTTCTT 59.992 43.478 0.00 0.00 0.00 2.52
250 251 4.222145 AGACAAATACTCCCTGCGTTCTTA 59.778 41.667 0.00 0.00 0.00 2.10
251 252 4.901868 ACAAATACTCCCTGCGTTCTTAA 58.098 39.130 0.00 0.00 0.00 1.85
252 253 5.310451 ACAAATACTCCCTGCGTTCTTAAA 58.690 37.500 0.00 0.00 0.00 1.52
253 254 5.944007 ACAAATACTCCCTGCGTTCTTAAAT 59.056 36.000 0.00 0.00 0.00 1.40
254 255 7.107542 ACAAATACTCCCTGCGTTCTTAAATA 58.892 34.615 0.00 0.00 0.00 1.40
255 256 7.773690 ACAAATACTCCCTGCGTTCTTAAATAT 59.226 33.333 0.00 0.00 0.00 1.28
256 257 9.268268 CAAATACTCCCTGCGTTCTTAAATATA 57.732 33.333 0.00 0.00 0.00 0.86
257 258 9.841295 AAATACTCCCTGCGTTCTTAAATATAA 57.159 29.630 0.00 0.00 0.00 0.98
258 259 9.490379 AATACTCCCTGCGTTCTTAAATATAAG 57.510 33.333 0.00 0.00 39.97 1.73
259 260 6.885922 ACTCCCTGCGTTCTTAAATATAAGT 58.114 36.000 0.00 0.00 39.65 2.24
260 261 6.985059 ACTCCCTGCGTTCTTAAATATAAGTC 59.015 38.462 0.00 0.00 39.65 3.01
261 262 7.120923 TCCCTGCGTTCTTAAATATAAGTCT 57.879 36.000 0.00 0.00 39.65 3.24
262 263 7.562135 TCCCTGCGTTCTTAAATATAAGTCTT 58.438 34.615 0.00 0.00 39.65 3.01
263 264 8.044908 TCCCTGCGTTCTTAAATATAAGTCTTT 58.955 33.333 0.00 0.00 39.65 2.52
264 265 8.336080 CCCTGCGTTCTTAAATATAAGTCTTTC 58.664 37.037 0.00 0.00 39.65 2.62
265 266 8.879759 CCTGCGTTCTTAAATATAAGTCTTTCA 58.120 33.333 0.00 0.00 39.65 2.69
283 284 9.660180 AGTCTTTCAAGATATTCCACTAAAGAC 57.340 33.333 13.85 13.85 45.96 3.01
284 285 9.660180 GTCTTTCAAGATATTCCACTAAAGACT 57.340 33.333 14.24 0.00 43.93 3.24
292 293 8.794553 AGATATTCCACTAAAGACTACATACGG 58.205 37.037 0.00 0.00 0.00 4.02
293 294 8.701908 ATATTCCACTAAAGACTACATACGGA 57.298 34.615 0.00 0.00 0.00 4.69
294 295 6.446781 TTCCACTAAAGACTACATACGGAG 57.553 41.667 0.00 0.00 0.00 4.63
295 296 4.337555 TCCACTAAAGACTACATACGGAGC 59.662 45.833 0.00 0.00 0.00 4.70
296 297 4.338682 CCACTAAAGACTACATACGGAGCT 59.661 45.833 0.00 0.00 0.00 4.09
297 298 5.530171 CCACTAAAGACTACATACGGAGCTA 59.470 44.000 0.00 0.00 0.00 3.32
298 299 6.039047 CCACTAAAGACTACATACGGAGCTAA 59.961 42.308 0.00 0.00 0.00 3.09
299 300 7.415989 CCACTAAAGACTACATACGGAGCTAAA 60.416 40.741 0.00 0.00 0.00 1.85
300 301 8.136165 CACTAAAGACTACATACGGAGCTAAAT 58.864 37.037 0.00 0.00 0.00 1.40
301 302 8.136165 ACTAAAGACTACATACGGAGCTAAATG 58.864 37.037 0.00 0.00 0.00 2.32
302 303 6.710597 AAGACTACATACGGAGCTAAATGA 57.289 37.500 0.00 0.00 0.00 2.57
303 304 6.320494 AGACTACATACGGAGCTAAATGAG 57.680 41.667 0.00 0.00 0.00 2.90
304 305 5.828859 AGACTACATACGGAGCTAAATGAGT 59.171 40.000 0.00 0.00 0.00 3.41
305 306 6.321690 AGACTACATACGGAGCTAAATGAGTT 59.678 38.462 0.00 0.00 0.00 3.01
306 307 7.501559 AGACTACATACGGAGCTAAATGAGTTA 59.498 37.037 0.00 0.00 0.00 2.24
307 308 8.004087 ACTACATACGGAGCTAAATGAGTTAA 57.996 34.615 0.00 0.00 0.00 2.01
308 309 8.639761 ACTACATACGGAGCTAAATGAGTTAAT 58.360 33.333 0.00 0.00 0.00 1.40
309 310 7.948278 ACATACGGAGCTAAATGAGTTAATC 57.052 36.000 0.00 0.00 0.00 1.75
310 311 7.727181 ACATACGGAGCTAAATGAGTTAATCT 58.273 34.615 0.00 0.00 0.00 2.40
311 312 8.857098 ACATACGGAGCTAAATGAGTTAATCTA 58.143 33.333 0.00 0.00 0.00 1.98
312 313 9.130312 CATACGGAGCTAAATGAGTTAATCTAC 57.870 37.037 0.00 0.00 0.00 2.59
313 314 7.108841 ACGGAGCTAAATGAGTTAATCTACA 57.891 36.000 0.00 0.00 0.00 2.74
314 315 6.979238 ACGGAGCTAAATGAGTTAATCTACAC 59.021 38.462 0.00 0.00 0.00 2.90
315 316 7.147880 ACGGAGCTAAATGAGTTAATCTACACT 60.148 37.037 0.00 0.00 0.00 3.55
316 317 7.380065 CGGAGCTAAATGAGTTAATCTACACTC 59.620 40.741 0.00 0.00 40.03 3.51
317 318 8.417884 GGAGCTAAATGAGTTAATCTACACTCT 58.582 37.037 0.00 0.00 40.24 3.24
326 327 9.784680 TGAGTTAATCTACACTCTAAAATCGTC 57.215 33.333 1.31 0.00 40.24 4.20
354 355 5.991328 ACATTTCTATGTAGTCCGCATTG 57.009 39.130 0.00 0.00 43.12 2.82
355 356 5.670485 ACATTTCTATGTAGTCCGCATTGA 58.330 37.500 0.00 0.00 43.12 2.57
356 357 6.112734 ACATTTCTATGTAGTCCGCATTGAA 58.887 36.000 0.00 0.00 43.12 2.69
357 358 6.597672 ACATTTCTATGTAGTCCGCATTGAAA 59.402 34.615 13.75 13.75 44.90 2.69
358 359 7.807977 ATTTCTATGTAGTCCGCATTGAAAT 57.192 32.000 16.03 16.03 44.78 2.17
359 360 6.844696 TTCTATGTAGTCCGCATTGAAATC 57.155 37.500 0.00 0.00 36.02 2.17
360 361 6.161855 TCTATGTAGTCCGCATTGAAATCT 57.838 37.500 0.00 0.00 0.00 2.40
361 362 5.985530 TCTATGTAGTCCGCATTGAAATCTG 59.014 40.000 0.00 0.00 0.00 2.90
362 363 3.937814 TGTAGTCCGCATTGAAATCTGT 58.062 40.909 0.00 0.00 0.00 3.41
363 364 5.079689 TGTAGTCCGCATTGAAATCTGTA 57.920 39.130 0.00 0.00 0.00 2.74
364 365 5.483811 TGTAGTCCGCATTGAAATCTGTAA 58.516 37.500 0.00 0.00 0.00 2.41
365 366 5.935206 TGTAGTCCGCATTGAAATCTGTAAA 59.065 36.000 0.00 0.00 0.00 2.01
366 367 5.957842 AGTCCGCATTGAAATCTGTAAAA 57.042 34.783 0.00 0.00 0.00 1.52
367 368 6.325919 AGTCCGCATTGAAATCTGTAAAAA 57.674 33.333 0.00 0.00 0.00 1.94
368 369 6.381801 AGTCCGCATTGAAATCTGTAAAAAG 58.618 36.000 0.00 0.00 0.00 2.27
369 370 6.206634 AGTCCGCATTGAAATCTGTAAAAAGA 59.793 34.615 0.00 0.00 0.00 2.52
370 371 6.305638 GTCCGCATTGAAATCTGTAAAAAGAC 59.694 38.462 0.00 0.00 0.00 3.01
371 372 6.206634 TCCGCATTGAAATCTGTAAAAAGACT 59.793 34.615 0.00 0.00 0.00 3.24
372 373 6.863126 CCGCATTGAAATCTGTAAAAAGACTT 59.137 34.615 0.00 0.00 0.00 3.01
373 374 8.020819 CCGCATTGAAATCTGTAAAAAGACTTA 58.979 33.333 0.00 0.00 0.00 2.24
374 375 9.559958 CGCATTGAAATCTGTAAAAAGACTTAT 57.440 29.630 0.00 0.00 0.00 1.73
392 393 9.819267 AAGACTTATATTTAGAAACGAAGGGAG 57.181 33.333 0.00 0.00 0.00 4.30
393 394 8.979534 AGACTTATATTTAGAAACGAAGGGAGT 58.020 33.333 0.00 0.00 0.00 3.85
408 409 9.978044 AACGAAGGGAGTATATAATAAACTGTC 57.022 33.333 0.00 0.00 0.00 3.51
409 410 9.139734 ACGAAGGGAGTATATAATAAACTGTCA 57.860 33.333 0.00 0.00 0.00 3.58
410 411 9.976511 CGAAGGGAGTATATAATAAACTGTCAA 57.023 33.333 0.00 0.00 0.00 3.18
414 415 8.985805 GGGAGTATATAATAAACTGTCAAACCG 58.014 37.037 0.00 0.00 0.00 4.44
415 416 8.985805 GGAGTATATAATAAACTGTCAAACCGG 58.014 37.037 0.00 0.00 0.00 5.28
416 417 9.754382 GAGTATATAATAAACTGTCAAACCGGA 57.246 33.333 9.46 0.00 0.00 5.14
417 418 9.538508 AGTATATAATAAACTGTCAAACCGGAC 57.461 33.333 9.46 0.00 38.29 4.79
418 419 7.797038 ATATAATAAACTGTCAAACCGGACC 57.203 36.000 9.46 0.00 36.97 4.46
419 420 3.495434 ATAAACTGTCAAACCGGACCA 57.505 42.857 9.46 0.00 36.97 4.02
420 421 2.131776 AAACTGTCAAACCGGACCAA 57.868 45.000 9.46 0.00 36.97 3.67
421 422 2.131776 AACTGTCAAACCGGACCAAA 57.868 45.000 9.46 0.00 36.97 3.28
422 423 2.358322 ACTGTCAAACCGGACCAAAT 57.642 45.000 9.46 0.00 36.97 2.32
423 424 3.495434 ACTGTCAAACCGGACCAAATA 57.505 42.857 9.46 0.00 36.97 1.40
424 425 3.143728 ACTGTCAAACCGGACCAAATAC 58.856 45.455 9.46 0.00 36.97 1.89
425 426 3.142951 CTGTCAAACCGGACCAAATACA 58.857 45.455 9.46 1.94 36.97 2.29
426 427 2.879646 TGTCAAACCGGACCAAATACAC 59.120 45.455 9.46 0.00 36.97 2.90
427 428 3.143728 GTCAAACCGGACCAAATACACT 58.856 45.455 9.46 0.00 0.00 3.55
428 429 3.058501 GTCAAACCGGACCAAATACACTG 60.059 47.826 9.46 0.00 0.00 3.66
429 430 2.882137 CAAACCGGACCAAATACACTGT 59.118 45.455 9.46 0.00 0.00 3.55
430 431 2.178912 ACCGGACCAAATACACTGTG 57.821 50.000 9.46 6.19 0.00 3.66
431 432 1.695242 ACCGGACCAAATACACTGTGA 59.305 47.619 15.86 0.00 0.00 3.58
432 433 2.105134 ACCGGACCAAATACACTGTGAA 59.895 45.455 15.86 0.00 0.00 3.18
433 434 3.244770 ACCGGACCAAATACACTGTGAAT 60.245 43.478 15.86 0.00 0.00 2.57
434 435 3.756434 CCGGACCAAATACACTGTGAATT 59.244 43.478 15.86 3.40 0.00 2.17
435 436 4.379394 CCGGACCAAATACACTGTGAATTG 60.379 45.833 15.86 14.53 0.00 2.32
436 437 4.454161 CGGACCAAATACACTGTGAATTGA 59.546 41.667 15.86 0.00 0.00 2.57
437 438 5.390885 CGGACCAAATACACTGTGAATTGAG 60.391 44.000 15.86 11.44 0.00 3.02
438 439 5.106157 GGACCAAATACACTGTGAATTGAGG 60.106 44.000 15.86 10.86 0.00 3.86
439 440 4.218417 ACCAAATACACTGTGAATTGAGGC 59.782 41.667 15.86 0.00 0.00 4.70
440 441 4.218200 CCAAATACACTGTGAATTGAGGCA 59.782 41.667 15.86 0.00 0.00 4.75
441 442 5.105635 CCAAATACACTGTGAATTGAGGCAT 60.106 40.000 15.86 0.00 0.00 4.40
442 443 6.095300 CCAAATACACTGTGAATTGAGGCATA 59.905 38.462 15.86 0.00 0.00 3.14
443 444 7.201848 CCAAATACACTGTGAATTGAGGCATAT 60.202 37.037 15.86 0.00 0.00 1.78
444 445 7.886629 AATACACTGTGAATTGAGGCATATT 57.113 32.000 15.86 1.38 0.00 1.28
445 446 8.978874 AATACACTGTGAATTGAGGCATATTA 57.021 30.769 15.86 0.00 0.00 0.98
446 447 6.932356 ACACTGTGAATTGAGGCATATTAG 57.068 37.500 15.86 0.00 0.00 1.73
447 448 5.297776 ACACTGTGAATTGAGGCATATTAGC 59.702 40.000 15.86 0.00 0.00 3.09
464 465 9.987272 GCATATTAGCCCTTTATTCATTTTTCT 57.013 29.630 0.00 0.00 0.00 2.52
481 482 9.270640 TCATTTTTCTTAATTTGTGGTCAATGG 57.729 29.630 0.00 0.00 33.32 3.16
482 483 9.054922 CATTTTTCTTAATTTGTGGTCAATGGT 57.945 29.630 0.00 0.00 33.32 3.55
487 488 9.703892 TTCTTAATTTGTGGTCAATGGTAAATG 57.296 29.630 0.00 0.00 33.32 2.32
488 489 7.816995 TCTTAATTTGTGGTCAATGGTAAATGC 59.183 33.333 0.00 0.00 33.32 3.56
489 490 3.951775 TTGTGGTCAATGGTAAATGCC 57.048 42.857 0.00 0.00 0.00 4.40
490 491 2.175202 TGTGGTCAATGGTAAATGCCC 58.825 47.619 0.00 0.00 0.00 5.36
491 492 1.134175 GTGGTCAATGGTAAATGCCCG 59.866 52.381 0.00 0.00 0.00 6.13
492 493 1.004862 TGGTCAATGGTAAATGCCCGA 59.995 47.619 0.00 0.00 0.00 5.14
493 494 2.096248 GGTCAATGGTAAATGCCCGAA 58.904 47.619 0.00 0.00 0.00 4.30
494 495 2.099098 GGTCAATGGTAAATGCCCGAAG 59.901 50.000 0.00 0.00 0.00 3.79
495 496 2.752903 GTCAATGGTAAATGCCCGAAGT 59.247 45.455 0.00 0.00 0.00 3.01
496 497 3.192633 GTCAATGGTAAATGCCCGAAGTT 59.807 43.478 0.00 0.00 0.00 2.66
497 498 3.829601 TCAATGGTAAATGCCCGAAGTTT 59.170 39.130 0.00 0.00 0.00 2.66
498 499 5.010933 TCAATGGTAAATGCCCGAAGTTTA 58.989 37.500 0.00 0.00 0.00 2.01
499 500 5.124776 TCAATGGTAAATGCCCGAAGTTTAG 59.875 40.000 0.00 0.00 0.00 1.85
500 501 4.289238 TGGTAAATGCCCGAAGTTTAGA 57.711 40.909 0.00 0.00 0.00 2.10
501 502 4.850680 TGGTAAATGCCCGAAGTTTAGAT 58.149 39.130 0.00 0.00 0.00 1.98
502 503 5.258051 TGGTAAATGCCCGAAGTTTAGATT 58.742 37.500 0.00 0.00 0.00 2.40
503 504 5.712917 TGGTAAATGCCCGAAGTTTAGATTT 59.287 36.000 0.00 0.00 0.00 2.17
504 505 6.885376 TGGTAAATGCCCGAAGTTTAGATTTA 59.115 34.615 0.00 0.00 0.00 1.40
505 506 7.393796 TGGTAAATGCCCGAAGTTTAGATTTAA 59.606 33.333 0.00 0.00 0.00 1.52
506 507 8.410912 GGTAAATGCCCGAAGTTTAGATTTAAT 58.589 33.333 0.00 0.00 0.00 1.40
509 510 9.797556 AAATGCCCGAAGTTTAGATTTAATAAC 57.202 29.630 0.00 0.00 0.00 1.89
510 511 7.925043 TGCCCGAAGTTTAGATTTAATAACA 57.075 32.000 0.00 0.00 0.00 2.41
511 512 8.514330 TGCCCGAAGTTTAGATTTAATAACAT 57.486 30.769 0.00 0.00 0.00 2.71
512 513 9.616156 TGCCCGAAGTTTAGATTTAATAACATA 57.384 29.630 0.00 0.00 0.00 2.29
532 533 8.718102 AACATAAAAGTAGAGCGAATATGTGT 57.282 30.769 0.00 0.00 33.96 3.72
533 534 8.131455 ACATAAAAGTAGAGCGAATATGTGTG 57.869 34.615 0.00 0.00 32.84 3.82
534 535 5.470845 AAAAGTAGAGCGAATATGTGTGC 57.529 39.130 0.00 0.00 0.00 4.57
535 536 2.732366 AGTAGAGCGAATATGTGTGCG 58.268 47.619 0.00 0.00 0.00 5.34
536 537 2.099263 AGTAGAGCGAATATGTGTGCGT 59.901 45.455 0.00 0.00 0.00 5.24
537 538 2.863401 AGAGCGAATATGTGTGCGTA 57.137 45.000 0.00 0.00 0.00 4.42
538 539 3.159353 AGAGCGAATATGTGTGCGTAA 57.841 42.857 0.00 0.00 0.00 3.18
539 540 3.517602 AGAGCGAATATGTGTGCGTAAA 58.482 40.909 0.00 0.00 0.00 2.01
540 541 3.930229 AGAGCGAATATGTGTGCGTAAAA 59.070 39.130 0.00 0.00 0.00 1.52
541 542 4.570772 AGAGCGAATATGTGTGCGTAAAAT 59.429 37.500 0.00 0.00 0.00 1.82
542 543 4.587306 AGCGAATATGTGTGCGTAAAATG 58.413 39.130 0.00 0.00 0.00 2.32
543 544 3.177643 GCGAATATGTGTGCGTAAAATGC 59.822 43.478 0.00 0.00 0.00 3.56
544 545 4.587306 CGAATATGTGTGCGTAAAATGCT 58.413 39.130 0.00 0.00 0.00 3.79
545 546 5.733299 CGAATATGTGTGCGTAAAATGCTA 58.267 37.500 0.00 0.00 0.00 3.49
546 547 6.188871 CGAATATGTGTGCGTAAAATGCTAA 58.811 36.000 0.00 0.00 0.00 3.09
547 548 6.850823 CGAATATGTGTGCGTAAAATGCTAAT 59.149 34.615 0.00 0.00 0.00 1.73
548 549 7.375808 CGAATATGTGTGCGTAAAATGCTAATT 59.624 33.333 0.00 0.00 0.00 1.40
549 550 9.658475 GAATATGTGTGCGTAAAATGCTAATTA 57.342 29.630 0.00 0.00 0.00 1.40
550 551 9.445786 AATATGTGTGCGTAAAATGCTAATTAC 57.554 29.630 0.00 0.00 0.00 1.89
551 552 6.242508 TGTGTGCGTAAAATGCTAATTACA 57.757 33.333 6.82 0.00 32.75 2.41
552 553 6.847400 TGTGTGCGTAAAATGCTAATTACAT 58.153 32.000 6.82 0.00 32.75 2.29
553 554 7.309177 TGTGTGCGTAAAATGCTAATTACATT 58.691 30.769 7.19 7.19 39.38 2.71
554 555 7.810282 TGTGTGCGTAAAATGCTAATTACATTT 59.190 29.630 14.81 14.81 46.85 2.32
555 556 8.311120 GTGTGCGTAAAATGCTAATTACATTTC 58.689 33.333 18.19 11.14 44.76 2.17
563 564 9.880157 AAAATGCTAATTACATTTCAGATTGCT 57.120 25.926 18.19 5.87 44.76 3.91
624 627 1.342174 CATGTGCTCAGTTTTGCCCTT 59.658 47.619 0.00 0.00 0.00 3.95
662 665 0.250597 GTTTTGCCCCTAGTCCGTGT 60.251 55.000 0.00 0.00 0.00 4.49
880 883 4.103103 CGGCGACAGAGAGCACGA 62.103 66.667 0.00 0.00 34.54 4.35
1077 1080 1.112916 TGCCTGTCTTCGTCTGTCCA 61.113 55.000 0.00 0.00 0.00 4.02
1086 1089 3.986006 GTCTGTCCACGGTGCCGA 61.986 66.667 18.16 0.00 42.83 5.54
1134 1139 0.818296 CCGAGGAACCAGAATCGTCT 59.182 55.000 0.00 0.00 33.43 4.18
1531 1536 6.017026 TCGCACTGGTTGTAATGTTGAAAATA 60.017 34.615 0.00 0.00 0.00 1.40
2347 2362 3.135994 GCGTGAGAGTGGTTTTCCTTTA 58.864 45.455 0.00 0.00 41.38 1.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.082300 TGGTGCATATGTGGTTAGCAAAAG 60.082 41.667 4.29 0.00 36.91 2.27
2 3 3.192422 GTGGTGCATATGTGGTTAGCAAA 59.808 43.478 4.29 0.00 36.91 3.68
3 4 2.752354 GTGGTGCATATGTGGTTAGCAA 59.248 45.455 4.29 0.00 36.91 3.91
4 5 2.290577 TGTGGTGCATATGTGGTTAGCA 60.291 45.455 4.29 0.00 0.00 3.49
5 6 2.364632 TGTGGTGCATATGTGGTTAGC 58.635 47.619 4.29 0.00 0.00 3.09
6 7 4.639755 TCAATGTGGTGCATATGTGGTTAG 59.360 41.667 4.29 0.00 36.67 2.34
7 8 4.593956 TCAATGTGGTGCATATGTGGTTA 58.406 39.130 4.29 0.00 36.67 2.85
8 9 3.429492 TCAATGTGGTGCATATGTGGTT 58.571 40.909 4.29 0.00 36.67 3.67
9 10 3.084536 TCAATGTGGTGCATATGTGGT 57.915 42.857 4.29 0.00 36.67 4.16
10 11 3.633065 TCATCAATGTGGTGCATATGTGG 59.367 43.478 4.29 0.00 36.67 4.17
11 12 4.904253 TCATCAATGTGGTGCATATGTG 57.096 40.909 4.29 0.00 36.67 3.21
12 13 5.134661 TCATCATCAATGTGGTGCATATGT 58.865 37.500 4.29 0.00 36.67 2.29
13 14 5.335661 CCTCATCATCAATGTGGTGCATATG 60.336 44.000 0.00 0.00 41.93 1.78
14 15 4.765339 CCTCATCATCAATGTGGTGCATAT 59.235 41.667 0.00 0.00 41.93 1.78
15 16 4.139038 CCTCATCATCAATGTGGTGCATA 58.861 43.478 0.00 0.00 41.93 3.14
16 17 2.956333 CCTCATCATCAATGTGGTGCAT 59.044 45.455 0.00 0.00 41.93 3.96
17 18 2.371306 CCTCATCATCAATGTGGTGCA 58.629 47.619 0.00 0.00 41.93 4.57
22 23 1.259770 CGCGACCTCATCATCAATGTG 59.740 52.381 0.00 0.00 36.68 3.21
23 24 1.575244 CGCGACCTCATCATCAATGT 58.425 50.000 0.00 0.00 36.68 2.71
24 25 0.234106 GCGCGACCTCATCATCAATG 59.766 55.000 12.10 0.00 36.65 2.82
25 26 1.217585 CGCGCGACCTCATCATCAAT 61.218 55.000 28.94 0.00 0.00 2.57
26 27 1.878069 CGCGCGACCTCATCATCAA 60.878 57.895 28.94 0.00 0.00 2.57
27 28 2.278792 CGCGCGACCTCATCATCA 60.279 61.111 28.94 0.00 0.00 3.07
28 29 2.278857 ACGCGCGACCTCATCATC 60.279 61.111 39.36 0.00 0.00 2.92
29 30 2.583319 CACGCGCGACCTCATCAT 60.583 61.111 39.36 7.53 0.00 2.45
30 31 3.683587 CTCACGCGCGACCTCATCA 62.684 63.158 39.36 9.06 0.00 3.07
31 32 2.669808 ATCTCACGCGCGACCTCATC 62.670 60.000 39.36 0.00 0.00 2.92
32 33 2.284798 AATCTCACGCGCGACCTCAT 62.285 55.000 39.36 17.75 0.00 2.90
33 34 2.867333 GAATCTCACGCGCGACCTCA 62.867 60.000 39.36 16.14 0.00 3.86
34 35 2.202623 AATCTCACGCGCGACCTC 60.203 61.111 39.36 0.00 0.00 3.85
35 36 2.202623 GAATCTCACGCGCGACCT 60.203 61.111 39.36 12.20 0.00 3.85
36 37 3.607987 CGAATCTCACGCGCGACC 61.608 66.667 39.36 14.73 0.00 4.79
37 38 2.434134 AACGAATCTCACGCGCGAC 61.434 57.895 39.36 15.85 0.00 5.19
38 39 2.126618 AACGAATCTCACGCGCGA 60.127 55.556 39.36 15.38 0.00 5.87
39 40 2.018670 CAACGAATCTCACGCGCG 59.981 61.111 30.96 30.96 0.00 6.86
40 41 2.380410 ACCAACGAATCTCACGCGC 61.380 57.895 5.73 0.00 0.00 6.86
41 42 1.006825 TCACCAACGAATCTCACGCG 61.007 55.000 3.53 3.53 0.00 6.01
42 43 1.136336 GTTCACCAACGAATCTCACGC 60.136 52.381 0.00 0.00 0.00 5.34
43 44 2.131972 TGTTCACCAACGAATCTCACG 58.868 47.619 0.00 0.00 34.95 4.35
44 45 4.929808 AGTATGTTCACCAACGAATCTCAC 59.070 41.667 0.00 0.00 34.95 3.51
45 46 5.147330 AGTATGTTCACCAACGAATCTCA 57.853 39.130 0.00 0.00 34.95 3.27
46 47 4.567159 GGAGTATGTTCACCAACGAATCTC 59.433 45.833 0.00 0.00 34.95 2.75
47 48 4.020573 TGGAGTATGTTCACCAACGAATCT 60.021 41.667 0.00 0.00 34.95 2.40
48 49 4.250464 TGGAGTATGTTCACCAACGAATC 58.750 43.478 0.00 0.00 34.95 2.52
49 50 4.253685 CTGGAGTATGTTCACCAACGAAT 58.746 43.478 0.00 0.00 34.95 3.34
50 51 3.556213 CCTGGAGTATGTTCACCAACGAA 60.556 47.826 0.00 0.00 34.95 3.85
51 52 2.028476 CCTGGAGTATGTTCACCAACGA 60.028 50.000 0.00 0.00 34.95 3.85
52 53 2.028476 TCCTGGAGTATGTTCACCAACG 60.028 50.000 0.00 0.00 34.95 4.10
53 54 3.335579 GTCCTGGAGTATGTTCACCAAC 58.664 50.000 0.00 0.00 31.85 3.77
54 55 2.028476 CGTCCTGGAGTATGTTCACCAA 60.028 50.000 0.00 0.00 31.85 3.67
55 56 1.548719 CGTCCTGGAGTATGTTCACCA 59.451 52.381 0.00 0.00 0.00 4.17
56 57 1.822990 TCGTCCTGGAGTATGTTCACC 59.177 52.381 0.00 0.00 0.00 4.02
57 58 2.753452 TCTCGTCCTGGAGTATGTTCAC 59.247 50.000 0.00 0.00 35.52 3.18
58 59 3.081710 TCTCGTCCTGGAGTATGTTCA 57.918 47.619 0.00 0.00 35.52 3.18
59 60 5.531659 TCTTATCTCGTCCTGGAGTATGTTC 59.468 44.000 0.00 0.00 35.52 3.18
60 61 5.446860 TCTTATCTCGTCCTGGAGTATGTT 58.553 41.667 0.00 0.00 35.52 2.71
61 62 5.050126 TCTTATCTCGTCCTGGAGTATGT 57.950 43.478 0.00 0.00 35.52 2.29
62 63 6.582677 ATTCTTATCTCGTCCTGGAGTATG 57.417 41.667 0.00 0.00 35.52 2.39
63 64 7.604657 AAATTCTTATCTCGTCCTGGAGTAT 57.395 36.000 0.00 0.00 35.52 2.12
64 65 7.419711 AAAATTCTTATCTCGTCCTGGAGTA 57.580 36.000 0.00 0.00 35.52 2.59
65 66 5.941555 AAATTCTTATCTCGTCCTGGAGT 57.058 39.130 0.00 0.00 35.52 3.85
66 67 8.718102 TTAAAAATTCTTATCTCGTCCTGGAG 57.282 34.615 0.00 0.00 35.32 3.86
67 68 9.509956 TTTTAAAAATTCTTATCTCGTCCTGGA 57.490 29.630 0.00 0.00 0.00 3.86
68 69 9.774742 CTTTTAAAAATTCTTATCTCGTCCTGG 57.225 33.333 1.66 0.00 0.00 4.45
69 70 9.774742 CCTTTTAAAAATTCTTATCTCGTCCTG 57.225 33.333 1.66 0.00 0.00 3.86
70 71 8.459635 GCCTTTTAAAAATTCTTATCTCGTCCT 58.540 33.333 1.66 0.00 0.00 3.85
71 72 7.701078 GGCCTTTTAAAAATTCTTATCTCGTCC 59.299 37.037 1.66 0.00 0.00 4.79
72 73 8.241367 TGGCCTTTTAAAAATTCTTATCTCGTC 58.759 33.333 3.32 0.00 0.00 4.20
73 74 8.117813 TGGCCTTTTAAAAATTCTTATCTCGT 57.882 30.769 3.32 0.00 0.00 4.18
74 75 9.586435 AATGGCCTTTTAAAAATTCTTATCTCG 57.414 29.630 3.32 0.00 0.00 4.04
79 80 9.853177 TTCCAAATGGCCTTTTAAAAATTCTTA 57.147 25.926 15.68 0.00 34.44 2.10
80 81 8.759481 TTCCAAATGGCCTTTTAAAAATTCTT 57.241 26.923 15.68 0.00 34.44 2.52
81 82 8.759481 TTTCCAAATGGCCTTTTAAAAATTCT 57.241 26.923 15.68 0.00 34.44 2.40
82 83 9.979578 AATTTCCAAATGGCCTTTTAAAAATTC 57.020 25.926 24.78 0.00 34.44 2.17
83 84 9.979578 GAATTTCCAAATGGCCTTTTAAAAATT 57.020 25.926 27.41 27.41 31.48 1.82
84 85 8.296000 CGAATTTCCAAATGGCCTTTTAAAAAT 58.704 29.630 15.68 18.17 34.44 1.82
85 86 7.499232 TCGAATTTCCAAATGGCCTTTTAAAAA 59.501 29.630 15.68 17.01 34.44 1.94
86 87 6.992715 TCGAATTTCCAAATGGCCTTTTAAAA 59.007 30.769 15.68 17.30 34.44 1.52
87 88 6.525629 TCGAATTTCCAAATGGCCTTTTAAA 58.474 32.000 15.68 13.63 34.44 1.52
88 89 6.102897 TCGAATTTCCAAATGGCCTTTTAA 57.897 33.333 15.68 8.05 34.44 1.52
89 90 5.730296 TCGAATTTCCAAATGGCCTTTTA 57.270 34.783 15.68 1.83 34.44 1.52
90 91 4.615588 TCGAATTTCCAAATGGCCTTTT 57.384 36.364 10.72 10.72 34.44 2.27
91 92 4.283212 TCTTCGAATTTCCAAATGGCCTTT 59.717 37.500 3.32 0.00 34.44 3.11
92 93 3.831911 TCTTCGAATTTCCAAATGGCCTT 59.168 39.130 3.32 0.00 34.44 4.35
93 94 3.193479 GTCTTCGAATTTCCAAATGGCCT 59.807 43.478 3.32 0.00 34.44 5.19
94 95 3.511699 GTCTTCGAATTTCCAAATGGCC 58.488 45.455 0.00 0.00 34.44 5.36
95 96 3.193479 AGGTCTTCGAATTTCCAAATGGC 59.807 43.478 0.00 0.00 34.44 4.40
96 97 4.458989 TCAGGTCTTCGAATTTCCAAATGG 59.541 41.667 0.00 0.00 0.00 3.16
97 98 5.048782 TGTCAGGTCTTCGAATTTCCAAATG 60.049 40.000 0.00 0.00 0.00 2.32
98 99 5.048713 GTGTCAGGTCTTCGAATTTCCAAAT 60.049 40.000 0.00 0.00 0.00 2.32
99 100 4.274950 GTGTCAGGTCTTCGAATTTCCAAA 59.725 41.667 0.00 0.00 0.00 3.28
100 101 3.813166 GTGTCAGGTCTTCGAATTTCCAA 59.187 43.478 0.00 0.00 0.00 3.53
101 102 3.071023 AGTGTCAGGTCTTCGAATTTCCA 59.929 43.478 0.00 0.00 0.00 3.53
102 103 3.433615 CAGTGTCAGGTCTTCGAATTTCC 59.566 47.826 0.00 1.75 0.00 3.13
103 104 4.150804 GTCAGTGTCAGGTCTTCGAATTTC 59.849 45.833 0.00 0.00 0.00 2.17
104 105 4.058817 GTCAGTGTCAGGTCTTCGAATTT 58.941 43.478 0.00 0.00 0.00 1.82
105 106 3.069586 TGTCAGTGTCAGGTCTTCGAATT 59.930 43.478 0.00 0.00 0.00 2.17
106 107 2.628178 TGTCAGTGTCAGGTCTTCGAAT 59.372 45.455 0.00 0.00 0.00 3.34
107 108 2.028876 TGTCAGTGTCAGGTCTTCGAA 58.971 47.619 0.00 0.00 0.00 3.71
108 109 1.687563 TGTCAGTGTCAGGTCTTCGA 58.312 50.000 0.00 0.00 0.00 3.71
109 110 2.128035 GTTGTCAGTGTCAGGTCTTCG 58.872 52.381 0.00 0.00 0.00 3.79
110 111 2.128035 CGTTGTCAGTGTCAGGTCTTC 58.872 52.381 0.00 0.00 0.00 2.87
111 112 1.480954 ACGTTGTCAGTGTCAGGTCTT 59.519 47.619 0.00 0.00 0.00 3.01
112 113 1.112113 ACGTTGTCAGTGTCAGGTCT 58.888 50.000 0.00 0.00 0.00 3.85
113 114 1.935933 AACGTTGTCAGTGTCAGGTC 58.064 50.000 0.00 0.00 0.00 3.85
114 115 3.746045 ATAACGTTGTCAGTGTCAGGT 57.254 42.857 11.99 0.00 0.00 4.00
115 116 4.387862 GGTAATAACGTTGTCAGTGTCAGG 59.612 45.833 11.99 0.00 0.00 3.86
116 117 4.089493 CGGTAATAACGTTGTCAGTGTCAG 59.911 45.833 11.99 0.00 0.00 3.51
117 118 3.982701 CGGTAATAACGTTGTCAGTGTCA 59.017 43.478 11.99 0.00 0.00 3.58
118 119 3.181537 GCGGTAATAACGTTGTCAGTGTC 60.182 47.826 11.99 0.00 0.00 3.67
119 120 2.733026 GCGGTAATAACGTTGTCAGTGT 59.267 45.455 11.99 0.00 0.00 3.55
120 121 2.991190 AGCGGTAATAACGTTGTCAGTG 59.009 45.455 11.99 0.00 0.00 3.66
121 122 3.308438 AGCGGTAATAACGTTGTCAGT 57.692 42.857 11.99 0.00 0.00 3.41
122 123 3.676172 TCAAGCGGTAATAACGTTGTCAG 59.324 43.478 11.99 0.00 0.00 3.51
123 124 3.651206 TCAAGCGGTAATAACGTTGTCA 58.349 40.909 11.99 0.00 0.00 3.58
124 125 4.092383 ACATCAAGCGGTAATAACGTTGTC 59.908 41.667 11.99 0.00 0.00 3.18
125 126 3.998341 ACATCAAGCGGTAATAACGTTGT 59.002 39.130 11.99 0.00 0.00 3.32
126 127 4.593597 ACATCAAGCGGTAATAACGTTG 57.406 40.909 11.99 3.44 0.00 4.10
127 128 4.933400 AGAACATCAAGCGGTAATAACGTT 59.067 37.500 5.88 5.88 0.00 3.99
128 129 4.501071 AGAACATCAAGCGGTAATAACGT 58.499 39.130 0.00 0.00 0.00 3.99
129 130 6.292168 CCTTAGAACATCAAGCGGTAATAACG 60.292 42.308 0.00 0.00 0.00 3.18
130 131 6.511282 GCCTTAGAACATCAAGCGGTAATAAC 60.511 42.308 0.00 0.00 0.00 1.89
131 132 5.526111 GCCTTAGAACATCAAGCGGTAATAA 59.474 40.000 0.00 0.00 0.00 1.40
132 133 5.054477 GCCTTAGAACATCAAGCGGTAATA 58.946 41.667 0.00 0.00 0.00 0.98
133 134 3.877508 GCCTTAGAACATCAAGCGGTAAT 59.122 43.478 0.00 0.00 0.00 1.89
134 135 3.267483 GCCTTAGAACATCAAGCGGTAA 58.733 45.455 0.00 0.00 0.00 2.85
135 136 2.737359 CGCCTTAGAACATCAAGCGGTA 60.737 50.000 0.00 0.00 0.00 4.02
136 137 1.739067 GCCTTAGAACATCAAGCGGT 58.261 50.000 0.00 0.00 0.00 5.68
137 138 0.652592 CGCCTTAGAACATCAAGCGG 59.347 55.000 0.00 0.00 0.00 5.52
138 139 0.026803 GCGCCTTAGAACATCAAGCG 59.973 55.000 0.00 0.00 0.00 4.68
139 140 0.378610 GGCGCCTTAGAACATCAAGC 59.621 55.000 22.15 0.00 0.00 4.01
140 141 1.398390 GTGGCGCCTTAGAACATCAAG 59.602 52.381 29.70 0.00 0.00 3.02
141 142 1.003118 AGTGGCGCCTTAGAACATCAA 59.997 47.619 29.70 0.00 0.00 2.57
142 143 0.613260 AGTGGCGCCTTAGAACATCA 59.387 50.000 29.70 0.00 0.00 3.07
143 144 1.134670 AGAGTGGCGCCTTAGAACATC 60.135 52.381 29.70 14.89 0.00 3.06
144 145 0.905357 AGAGTGGCGCCTTAGAACAT 59.095 50.000 29.70 6.88 0.00 2.71
145 146 0.037326 CAGAGTGGCGCCTTAGAACA 60.037 55.000 29.70 1.01 0.00 3.18
146 147 0.246635 TCAGAGTGGCGCCTTAGAAC 59.753 55.000 29.70 17.26 0.00 3.01
147 148 0.973632 TTCAGAGTGGCGCCTTAGAA 59.026 50.000 29.70 19.97 0.00 2.10
148 149 0.973632 TTTCAGAGTGGCGCCTTAGA 59.026 50.000 29.70 15.20 0.00 2.10
149 150 1.079503 GTTTCAGAGTGGCGCCTTAG 58.920 55.000 29.70 13.02 0.00 2.18
150 151 0.685097 AGTTTCAGAGTGGCGCCTTA 59.315 50.000 29.70 4.80 0.00 2.69
151 152 0.685097 TAGTTTCAGAGTGGCGCCTT 59.315 50.000 29.70 16.45 0.00 4.35
152 153 0.037232 GTAGTTTCAGAGTGGCGCCT 60.037 55.000 29.70 8.29 0.00 5.52
153 154 0.037232 AGTAGTTTCAGAGTGGCGCC 60.037 55.000 22.73 22.73 0.00 6.53
154 155 1.797025 AAGTAGTTTCAGAGTGGCGC 58.203 50.000 0.00 0.00 0.00 6.53
155 156 2.480419 CCAAAGTAGTTTCAGAGTGGCG 59.520 50.000 0.00 0.00 0.00 5.69
156 157 2.226674 GCCAAAGTAGTTTCAGAGTGGC 59.773 50.000 5.83 5.83 43.10 5.01
157 158 2.814336 GGCCAAAGTAGTTTCAGAGTGG 59.186 50.000 0.00 0.00 0.00 4.00
158 159 3.476552 TGGCCAAAGTAGTTTCAGAGTG 58.523 45.455 0.61 0.00 0.00 3.51
159 160 3.857157 TGGCCAAAGTAGTTTCAGAGT 57.143 42.857 0.61 0.00 0.00 3.24
160 161 3.503748 CCTTGGCCAAAGTAGTTTCAGAG 59.496 47.826 20.91 2.15 33.66 3.35
161 162 3.486383 CCTTGGCCAAAGTAGTTTCAGA 58.514 45.455 20.91 0.00 33.66 3.27
162 163 2.029918 GCCTTGGCCAAAGTAGTTTCAG 60.030 50.000 20.91 2.95 33.66 3.02
163 164 1.960689 GCCTTGGCCAAAGTAGTTTCA 59.039 47.619 20.91 0.00 33.66 2.69
164 165 1.272490 GGCCTTGGCCAAAGTAGTTTC 59.728 52.381 24.50 0.00 33.66 2.78
165 166 1.338107 GGCCTTGGCCAAAGTAGTTT 58.662 50.000 24.50 0.00 33.66 2.66
166 167 0.187361 TGGCCTTGGCCAAAGTAGTT 59.813 50.000 29.06 0.00 36.86 2.24
167 168 0.187361 TTGGCCTTGGCCAAAGTAGT 59.813 50.000 35.63 0.00 45.56 2.73
168 169 3.050089 TTGGCCTTGGCCAAAGTAG 57.950 52.632 35.63 7.48 45.56 2.57
173 174 2.203818 ATGCTTGGCCTTGGCCAA 60.204 55.556 35.17 35.17 46.25 4.52
174 175 2.998480 CATGCTTGGCCTTGGCCA 60.998 61.111 27.73 27.73 38.19 5.36
175 176 2.999063 ACATGCTTGGCCTTGGCC 60.999 61.111 22.91 22.91 0.00 5.36
176 177 2.277591 TGACATGCTTGGCCTTGGC 61.278 57.895 3.32 2.49 0.00 4.52
177 178 0.896940 AGTGACATGCTTGGCCTTGG 60.897 55.000 3.32 0.00 0.00 3.61
178 179 0.242825 CAGTGACATGCTTGGCCTTG 59.757 55.000 3.32 0.00 0.00 3.61
179 180 1.530013 GCAGTGACATGCTTGGCCTT 61.530 55.000 3.32 0.00 43.07 4.35
180 181 1.975407 GCAGTGACATGCTTGGCCT 60.975 57.895 3.32 0.00 43.07 5.19
181 182 2.270257 TGCAGTGACATGCTTGGCC 61.270 57.895 2.48 0.00 46.63 5.36
182 183 1.080974 GTGCAGTGACATGCTTGGC 60.081 57.895 4.44 0.85 46.63 4.52
183 184 0.892358 AGGTGCAGTGACATGCTTGG 60.892 55.000 4.44 0.00 46.63 3.61
184 185 0.520404 GAGGTGCAGTGACATGCTTG 59.480 55.000 0.00 0.00 46.63 4.01
185 186 0.952497 CGAGGTGCAGTGACATGCTT 60.952 55.000 0.00 0.00 46.63 3.91
186 187 1.375140 CGAGGTGCAGTGACATGCT 60.375 57.895 0.00 0.00 46.63 3.79
187 188 3.031964 GCGAGGTGCAGTGACATGC 62.032 63.158 0.00 1.00 46.68 4.06
188 189 3.171987 GCGAGGTGCAGTGACATG 58.828 61.111 0.00 0.00 45.45 3.21
197 198 2.034607 CTAGGTCTAGGCGAGGTGC 58.965 63.158 0.00 0.00 45.38 5.01
198 199 0.752009 TGCTAGGTCTAGGCGAGGTG 60.752 60.000 7.08 0.00 33.87 4.00
199 200 0.186386 ATGCTAGGTCTAGGCGAGGT 59.814 55.000 7.08 0.00 33.87 3.85
200 201 0.600557 CATGCTAGGTCTAGGCGAGG 59.399 60.000 7.08 0.00 33.87 4.63
201 202 1.268352 GTCATGCTAGGTCTAGGCGAG 59.732 57.143 7.08 0.00 33.87 5.03
202 203 1.319541 GTCATGCTAGGTCTAGGCGA 58.680 55.000 7.08 0.00 33.87 5.54
203 204 0.315568 GGTCATGCTAGGTCTAGGCG 59.684 60.000 7.08 0.00 33.87 5.52
204 205 1.342819 CTGGTCATGCTAGGTCTAGGC 59.657 57.143 7.08 0.00 33.87 3.93
205 206 1.967066 CCTGGTCATGCTAGGTCTAGG 59.033 57.143 10.16 0.00 40.58 3.02
206 207 2.950781 TCCTGGTCATGCTAGGTCTAG 58.049 52.381 15.55 0.85 45.14 2.43
207 208 3.052869 TCTTCCTGGTCATGCTAGGTCTA 60.053 47.826 15.55 5.90 45.14 2.59
208 209 2.114616 CTTCCTGGTCATGCTAGGTCT 58.885 52.381 15.55 0.00 45.14 3.85
209 210 2.111384 TCTTCCTGGTCATGCTAGGTC 58.889 52.381 15.55 0.00 45.14 3.85
210 211 1.834263 GTCTTCCTGGTCATGCTAGGT 59.166 52.381 15.55 0.00 45.14 3.08
211 212 1.833630 TGTCTTCCTGGTCATGCTAGG 59.166 52.381 11.59 11.59 46.15 3.02
212 213 3.616956 TTGTCTTCCTGGTCATGCTAG 57.383 47.619 0.00 0.00 0.00 3.42
213 214 4.574674 ATTTGTCTTCCTGGTCATGCTA 57.425 40.909 0.00 0.00 0.00 3.49
214 215 2.957402 TTTGTCTTCCTGGTCATGCT 57.043 45.000 0.00 0.00 0.00 3.79
215 216 4.265073 AGTATTTGTCTTCCTGGTCATGC 58.735 43.478 0.00 0.00 0.00 4.06
216 217 4.878397 GGAGTATTTGTCTTCCTGGTCATG 59.122 45.833 0.00 0.00 0.00 3.07
217 218 4.080299 GGGAGTATTTGTCTTCCTGGTCAT 60.080 45.833 0.00 0.00 0.00 3.06
218 219 3.263425 GGGAGTATTTGTCTTCCTGGTCA 59.737 47.826 0.00 0.00 0.00 4.02
219 220 3.519913 AGGGAGTATTTGTCTTCCTGGTC 59.480 47.826 0.00 0.00 39.27 4.02
220 221 3.532102 AGGGAGTATTTGTCTTCCTGGT 58.468 45.455 0.00 0.00 39.27 4.00
223 224 2.093447 CGCAGGGAGTATTTGTCTTCCT 60.093 50.000 0.00 0.00 41.24 3.36
224 225 2.280628 CGCAGGGAGTATTTGTCTTCC 58.719 52.381 0.00 0.00 0.00 3.46
225 226 2.973945 ACGCAGGGAGTATTTGTCTTC 58.026 47.619 0.00 0.00 0.00 2.87
226 227 3.008049 AGAACGCAGGGAGTATTTGTCTT 59.992 43.478 0.00 0.00 0.00 3.01
227 228 2.567615 AGAACGCAGGGAGTATTTGTCT 59.432 45.455 0.00 0.00 0.00 3.41
228 229 2.973945 AGAACGCAGGGAGTATTTGTC 58.026 47.619 0.00 0.00 0.00 3.18
229 230 3.418684 AAGAACGCAGGGAGTATTTGT 57.581 42.857 0.00 0.00 0.00 2.83
230 231 5.873179 TTTAAGAACGCAGGGAGTATTTG 57.127 39.130 0.00 0.00 0.00 2.32
231 232 9.841295 TTATATTTAAGAACGCAGGGAGTATTT 57.159 29.630 0.00 0.00 0.00 1.40
232 233 9.490379 CTTATATTTAAGAACGCAGGGAGTATT 57.510 33.333 0.00 0.00 37.59 1.89
233 234 8.648693 ACTTATATTTAAGAACGCAGGGAGTAT 58.351 33.333 9.58 0.00 38.56 2.12
234 235 8.015185 ACTTATATTTAAGAACGCAGGGAGTA 57.985 34.615 9.58 0.00 38.56 2.59
235 236 6.885922 ACTTATATTTAAGAACGCAGGGAGT 58.114 36.000 9.58 0.00 38.56 3.85
236 237 7.210873 AGACTTATATTTAAGAACGCAGGGAG 58.789 38.462 9.58 0.00 38.56 4.30
237 238 7.120923 AGACTTATATTTAAGAACGCAGGGA 57.879 36.000 9.58 0.00 38.56 4.20
238 239 7.787725 AAGACTTATATTTAAGAACGCAGGG 57.212 36.000 9.58 0.00 38.56 4.45
239 240 8.879759 TGAAAGACTTATATTTAAGAACGCAGG 58.120 33.333 9.58 0.00 38.56 4.85
257 258 9.660180 GTCTTTAGTGGAATATCTTGAAAGACT 57.340 33.333 14.00 0.00 43.97 3.24
258 259 9.660180 AGTCTTTAGTGGAATATCTTGAAAGAC 57.340 33.333 13.60 13.60 46.04 3.01
266 267 8.794553 CCGTATGTAGTCTTTAGTGGAATATCT 58.205 37.037 0.00 0.00 0.00 1.98
267 268 8.790718 TCCGTATGTAGTCTTTAGTGGAATATC 58.209 37.037 0.00 0.00 0.00 1.63
268 269 8.701908 TCCGTATGTAGTCTTTAGTGGAATAT 57.298 34.615 0.00 0.00 0.00 1.28
269 270 7.255381 GCTCCGTATGTAGTCTTTAGTGGAATA 60.255 40.741 0.00 0.00 0.00 1.75
270 271 6.461231 GCTCCGTATGTAGTCTTTAGTGGAAT 60.461 42.308 0.00 0.00 0.00 3.01
271 272 5.163581 GCTCCGTATGTAGTCTTTAGTGGAA 60.164 44.000 0.00 0.00 0.00 3.53
272 273 4.337555 GCTCCGTATGTAGTCTTTAGTGGA 59.662 45.833 0.00 0.00 0.00 4.02
273 274 4.338682 AGCTCCGTATGTAGTCTTTAGTGG 59.661 45.833 0.00 0.00 0.00 4.00
274 275 5.502153 AGCTCCGTATGTAGTCTTTAGTG 57.498 43.478 0.00 0.00 0.00 2.74
275 276 7.636150 TTTAGCTCCGTATGTAGTCTTTAGT 57.364 36.000 0.00 0.00 0.00 2.24
276 277 8.350722 TCATTTAGCTCCGTATGTAGTCTTTAG 58.649 37.037 0.00 0.00 0.00 1.85
277 278 8.229253 TCATTTAGCTCCGTATGTAGTCTTTA 57.771 34.615 0.00 0.00 0.00 1.85
278 279 7.108841 TCATTTAGCTCCGTATGTAGTCTTT 57.891 36.000 0.00 0.00 0.00 2.52
279 280 6.321690 ACTCATTTAGCTCCGTATGTAGTCTT 59.678 38.462 0.00 0.00 0.00 3.01
280 281 5.828859 ACTCATTTAGCTCCGTATGTAGTCT 59.171 40.000 0.00 0.00 0.00 3.24
281 282 6.074544 ACTCATTTAGCTCCGTATGTAGTC 57.925 41.667 0.00 0.00 0.00 2.59
282 283 6.466885 AACTCATTTAGCTCCGTATGTAGT 57.533 37.500 0.00 0.00 0.00 2.73
283 284 9.130312 GATTAACTCATTTAGCTCCGTATGTAG 57.870 37.037 0.00 0.00 0.00 2.74
284 285 8.857098 AGATTAACTCATTTAGCTCCGTATGTA 58.143 33.333 0.00 0.00 0.00 2.29
285 286 7.727181 AGATTAACTCATTTAGCTCCGTATGT 58.273 34.615 0.00 0.00 0.00 2.29
286 287 9.130312 GTAGATTAACTCATTTAGCTCCGTATG 57.870 37.037 0.00 0.00 0.00 2.39
287 288 8.857098 TGTAGATTAACTCATTTAGCTCCGTAT 58.143 33.333 0.00 0.00 0.00 3.06
288 289 8.133627 GTGTAGATTAACTCATTTAGCTCCGTA 58.866 37.037 0.00 0.00 0.00 4.02
289 290 6.979238 GTGTAGATTAACTCATTTAGCTCCGT 59.021 38.462 0.00 0.00 0.00 4.69
290 291 7.203910 AGTGTAGATTAACTCATTTAGCTCCG 58.796 38.462 0.00 0.00 0.00 4.63
291 292 8.417884 AGAGTGTAGATTAACTCATTTAGCTCC 58.582 37.037 0.00 0.00 44.34 4.70
300 301 9.784680 GACGATTTTAGAGTGTAGATTAACTCA 57.215 33.333 5.68 0.00 44.34 3.41
323 324 9.917872 CGGACTACATAGAAATGTATATAGACG 57.082 37.037 0.00 0.00 45.33 4.18
324 325 9.719279 GCGGACTACATAGAAATGTATATAGAC 57.281 37.037 0.00 0.00 45.33 2.59
325 326 9.457436 TGCGGACTACATAGAAATGTATATAGA 57.543 33.333 0.00 0.00 45.33 1.98
328 329 9.371136 CAATGCGGACTACATAGAAATGTATAT 57.629 33.333 0.00 0.00 45.33 0.86
329 330 8.581578 TCAATGCGGACTACATAGAAATGTATA 58.418 33.333 0.00 0.00 45.33 1.47
330 331 7.441836 TCAATGCGGACTACATAGAAATGTAT 58.558 34.615 0.00 0.00 45.33 2.29
331 332 6.811954 TCAATGCGGACTACATAGAAATGTA 58.188 36.000 0.00 0.00 44.66 2.29
333 334 6.603237 TTCAATGCGGACTACATAGAAATG 57.397 37.500 0.00 0.00 39.17 2.32
334 335 7.716998 AGATTTCAATGCGGACTACATAGAAAT 59.283 33.333 0.00 0.00 36.29 2.17
335 336 7.011389 CAGATTTCAATGCGGACTACATAGAAA 59.989 37.037 0.00 0.00 0.00 2.52
336 337 6.479990 CAGATTTCAATGCGGACTACATAGAA 59.520 38.462 0.00 0.00 0.00 2.10
337 338 5.985530 CAGATTTCAATGCGGACTACATAGA 59.014 40.000 0.00 0.00 0.00 1.98
338 339 5.755375 ACAGATTTCAATGCGGACTACATAG 59.245 40.000 0.00 0.00 0.00 2.23
339 340 5.670485 ACAGATTTCAATGCGGACTACATA 58.330 37.500 0.00 0.00 0.00 2.29
340 341 4.517285 ACAGATTTCAATGCGGACTACAT 58.483 39.130 0.00 0.00 0.00 2.29
341 342 3.937814 ACAGATTTCAATGCGGACTACA 58.062 40.909 0.00 0.00 0.00 2.74
342 343 6.417191 TTTACAGATTTCAATGCGGACTAC 57.583 37.500 0.00 0.00 0.00 2.73
343 344 7.389330 TCTTTTTACAGATTTCAATGCGGACTA 59.611 33.333 0.00 0.00 0.00 2.59
344 345 5.957842 TTTTACAGATTTCAATGCGGACT 57.042 34.783 0.00 0.00 0.00 3.85
345 346 6.305638 GTCTTTTTACAGATTTCAATGCGGAC 59.694 38.462 0.00 0.00 0.00 4.79
346 347 6.206634 AGTCTTTTTACAGATTTCAATGCGGA 59.793 34.615 0.00 0.00 0.00 5.54
347 348 6.381801 AGTCTTTTTACAGATTTCAATGCGG 58.618 36.000 0.00 0.00 0.00 5.69
348 349 7.858052 AAGTCTTTTTACAGATTTCAATGCG 57.142 32.000 0.00 0.00 0.00 4.73
366 367 9.819267 CTCCCTTCGTTTCTAAATATAAGTCTT 57.181 33.333 0.00 0.00 0.00 3.01
367 368 8.979534 ACTCCCTTCGTTTCTAAATATAAGTCT 58.020 33.333 0.00 0.00 0.00 3.24
382 383 9.978044 GACAGTTTATTATATACTCCCTTCGTT 57.022 33.333 0.00 0.00 0.00 3.85
383 384 9.139734 TGACAGTTTATTATATACTCCCTTCGT 57.860 33.333 0.00 0.00 0.00 3.85
384 385 9.976511 TTGACAGTTTATTATATACTCCCTTCG 57.023 33.333 0.00 0.00 0.00 3.79
388 389 8.985805 CGGTTTGACAGTTTATTATATACTCCC 58.014 37.037 0.00 0.00 0.00 4.30
389 390 8.985805 CCGGTTTGACAGTTTATTATATACTCC 58.014 37.037 0.00 0.00 0.00 3.85
390 391 9.754382 TCCGGTTTGACAGTTTATTATATACTC 57.246 33.333 0.00 0.00 0.00 2.59
391 392 9.538508 GTCCGGTTTGACAGTTTATTATATACT 57.461 33.333 0.00 0.00 35.29 2.12
392 393 8.768019 GGTCCGGTTTGACAGTTTATTATATAC 58.232 37.037 0.00 0.00 36.97 1.47
393 394 8.484575 TGGTCCGGTTTGACAGTTTATTATATA 58.515 33.333 0.00 0.00 36.97 0.86
394 395 7.340256 TGGTCCGGTTTGACAGTTTATTATAT 58.660 34.615 0.00 0.00 36.97 0.86
395 396 6.709281 TGGTCCGGTTTGACAGTTTATTATA 58.291 36.000 0.00 0.00 36.97 0.98
396 397 5.562635 TGGTCCGGTTTGACAGTTTATTAT 58.437 37.500 0.00 0.00 36.97 1.28
397 398 4.970711 TGGTCCGGTTTGACAGTTTATTA 58.029 39.130 0.00 0.00 36.97 0.98
398 399 3.822940 TGGTCCGGTTTGACAGTTTATT 58.177 40.909 0.00 0.00 36.97 1.40
399 400 3.495434 TGGTCCGGTTTGACAGTTTAT 57.505 42.857 0.00 0.00 36.97 1.40
400 401 3.278668 TTGGTCCGGTTTGACAGTTTA 57.721 42.857 0.00 0.00 36.97 2.01
401 402 2.131776 TTGGTCCGGTTTGACAGTTT 57.868 45.000 0.00 0.00 36.97 2.66
402 403 2.131776 TTTGGTCCGGTTTGACAGTT 57.868 45.000 0.00 0.00 36.97 3.16
403 404 2.358322 ATTTGGTCCGGTTTGACAGT 57.642 45.000 0.00 0.00 36.97 3.55
404 405 3.058501 GTGTATTTGGTCCGGTTTGACAG 60.059 47.826 0.00 0.00 36.97 3.51
405 406 2.879646 GTGTATTTGGTCCGGTTTGACA 59.120 45.455 0.00 0.00 36.97 3.58
406 407 3.058501 CAGTGTATTTGGTCCGGTTTGAC 60.059 47.826 0.00 0.00 34.42 3.18
407 408 3.142951 CAGTGTATTTGGTCCGGTTTGA 58.857 45.455 0.00 0.00 0.00 2.69
408 409 2.882137 ACAGTGTATTTGGTCCGGTTTG 59.118 45.455 0.00 0.00 0.00 2.93
409 410 2.882137 CACAGTGTATTTGGTCCGGTTT 59.118 45.455 0.00 0.00 0.00 3.27
410 411 2.105134 TCACAGTGTATTTGGTCCGGTT 59.895 45.455 0.00 0.00 0.00 4.44
411 412 1.695242 TCACAGTGTATTTGGTCCGGT 59.305 47.619 0.00 0.00 0.00 5.28
412 413 2.465860 TCACAGTGTATTTGGTCCGG 57.534 50.000 0.00 0.00 0.00 5.14
413 414 4.454161 TCAATTCACAGTGTATTTGGTCCG 59.546 41.667 2.76 0.00 0.00 4.79
414 415 5.106157 CCTCAATTCACAGTGTATTTGGTCC 60.106 44.000 2.76 0.00 0.00 4.46
415 416 5.619981 GCCTCAATTCACAGTGTATTTGGTC 60.620 44.000 16.41 9.63 0.00 4.02
416 417 4.218417 GCCTCAATTCACAGTGTATTTGGT 59.782 41.667 16.41 0.00 0.00 3.67
417 418 4.218200 TGCCTCAATTCACAGTGTATTTGG 59.782 41.667 13.24 13.24 0.00 3.28
418 419 5.375417 TGCCTCAATTCACAGTGTATTTG 57.625 39.130 2.76 0.60 0.00 2.32
419 420 7.886629 ATATGCCTCAATTCACAGTGTATTT 57.113 32.000 2.76 0.00 0.00 1.40
420 421 7.886629 AATATGCCTCAATTCACAGTGTATT 57.113 32.000 0.00 0.00 0.00 1.89
421 422 7.173907 GCTAATATGCCTCAATTCACAGTGTAT 59.826 37.037 0.00 0.00 0.00 2.29
422 423 6.483307 GCTAATATGCCTCAATTCACAGTGTA 59.517 38.462 0.00 0.00 0.00 2.90
423 424 5.297776 GCTAATATGCCTCAATTCACAGTGT 59.702 40.000 0.00 0.00 0.00 3.55
424 425 5.755813 GCTAATATGCCTCAATTCACAGTG 58.244 41.667 0.00 0.00 0.00 3.66
438 439 9.987272 AGAAAAATGAATAAAGGGCTAATATGC 57.013 29.630 0.00 0.00 0.00 3.14
455 456 9.270640 CCATTGACCACAAATTAAGAAAAATGA 57.729 29.630 0.00 0.00 39.54 2.57
456 457 9.054922 ACCATTGACCACAAATTAAGAAAAATG 57.945 29.630 0.00 0.00 39.54 2.32
461 462 9.703892 CATTTACCATTGACCACAAATTAAGAA 57.296 29.630 0.00 0.00 39.54 2.52
462 463 7.816995 GCATTTACCATTGACCACAAATTAAGA 59.183 33.333 0.00 0.00 39.54 2.10
463 464 7.064490 GGCATTTACCATTGACCACAAATTAAG 59.936 37.037 0.00 0.00 39.54 1.85
464 465 6.876257 GGCATTTACCATTGACCACAAATTAA 59.124 34.615 0.00 0.00 39.54 1.40
465 466 6.402222 GGCATTTACCATTGACCACAAATTA 58.598 36.000 0.00 0.00 39.54 1.40
466 467 5.244755 GGCATTTACCATTGACCACAAATT 58.755 37.500 0.00 0.00 39.54 1.82
467 468 4.323409 GGGCATTTACCATTGACCACAAAT 60.323 41.667 0.00 0.00 41.02 2.32
468 469 3.007398 GGGCATTTACCATTGACCACAAA 59.993 43.478 0.00 0.00 41.02 2.83
469 470 2.564947 GGGCATTTACCATTGACCACAA 59.435 45.455 0.00 0.00 41.02 3.33
470 471 2.175202 GGGCATTTACCATTGACCACA 58.825 47.619 0.00 0.00 41.02 4.17
471 472 1.134175 CGGGCATTTACCATTGACCAC 59.866 52.381 0.00 0.00 41.46 4.16
472 473 1.004862 TCGGGCATTTACCATTGACCA 59.995 47.619 0.00 0.00 41.46 4.02
473 474 1.757682 TCGGGCATTTACCATTGACC 58.242 50.000 0.00 0.00 37.70 4.02
474 475 2.752903 ACTTCGGGCATTTACCATTGAC 59.247 45.455 0.00 0.00 0.00 3.18
475 476 3.080300 ACTTCGGGCATTTACCATTGA 57.920 42.857 0.00 0.00 0.00 2.57
476 477 3.866883 AACTTCGGGCATTTACCATTG 57.133 42.857 0.00 0.00 0.00 2.82
477 478 5.258051 TCTAAACTTCGGGCATTTACCATT 58.742 37.500 0.00 0.00 0.00 3.16
478 479 4.850680 TCTAAACTTCGGGCATTTACCAT 58.149 39.130 0.00 0.00 0.00 3.55
479 480 4.289238 TCTAAACTTCGGGCATTTACCA 57.711 40.909 0.00 0.00 0.00 3.25
480 481 5.830000 AATCTAAACTTCGGGCATTTACC 57.170 39.130 0.00 0.00 0.00 2.85
483 484 9.797556 GTTATTAAATCTAAACTTCGGGCATTT 57.202 29.630 0.00 0.00 0.00 2.32
484 485 8.962679 TGTTATTAAATCTAAACTTCGGGCATT 58.037 29.630 0.00 0.00 0.00 3.56
485 486 8.514330 TGTTATTAAATCTAAACTTCGGGCAT 57.486 30.769 0.00 0.00 0.00 4.40
486 487 7.925043 TGTTATTAAATCTAAACTTCGGGCA 57.075 32.000 0.00 0.00 0.00 5.36
506 507 9.811995 ACACATATTCGCTCTACTTTTATGTTA 57.188 29.630 0.00 0.00 29.01 2.41
507 508 8.604035 CACACATATTCGCTCTACTTTTATGTT 58.396 33.333 0.00 0.00 29.01 2.71
508 509 7.254455 GCACACATATTCGCTCTACTTTTATGT 60.254 37.037 0.00 0.00 30.99 2.29
509 510 7.065894 GCACACATATTCGCTCTACTTTTATG 58.934 38.462 0.00 0.00 0.00 1.90
510 511 6.074302 CGCACACATATTCGCTCTACTTTTAT 60.074 38.462 0.00 0.00 0.00 1.40
511 512 5.231357 CGCACACATATTCGCTCTACTTTTA 59.769 40.000 0.00 0.00 0.00 1.52
512 513 4.032900 CGCACACATATTCGCTCTACTTTT 59.967 41.667 0.00 0.00 0.00 2.27
513 514 3.551890 CGCACACATATTCGCTCTACTTT 59.448 43.478 0.00 0.00 0.00 2.66
514 515 3.116300 CGCACACATATTCGCTCTACTT 58.884 45.455 0.00 0.00 0.00 2.24
515 516 2.099263 ACGCACACATATTCGCTCTACT 59.901 45.455 0.00 0.00 0.00 2.57
516 517 2.460918 ACGCACACATATTCGCTCTAC 58.539 47.619 0.00 0.00 0.00 2.59
517 518 2.863401 ACGCACACATATTCGCTCTA 57.137 45.000 0.00 0.00 0.00 2.43
518 519 2.863401 TACGCACACATATTCGCTCT 57.137 45.000 0.00 0.00 0.00 4.09
519 520 3.918258 TTTACGCACACATATTCGCTC 57.082 42.857 0.00 0.00 0.00 5.03
520 521 4.587306 CATTTTACGCACACATATTCGCT 58.413 39.130 0.00 0.00 0.00 4.93
521 522 3.177643 GCATTTTACGCACACATATTCGC 59.822 43.478 0.00 0.00 0.00 4.70
522 523 4.587306 AGCATTTTACGCACACATATTCG 58.413 39.130 0.00 0.00 0.00 3.34
523 524 8.560576 AATTAGCATTTTACGCACACATATTC 57.439 30.769 0.00 0.00 0.00 1.75
524 525 9.445786 GTAATTAGCATTTTACGCACACATATT 57.554 29.630 0.00 0.00 0.00 1.28
525 526 8.616942 TGTAATTAGCATTTTACGCACACATAT 58.383 29.630 0.00 0.00 32.23 1.78
526 527 7.975750 TGTAATTAGCATTTTACGCACACATA 58.024 30.769 0.00 0.00 32.23 2.29
527 528 6.847400 TGTAATTAGCATTTTACGCACACAT 58.153 32.000 0.00 0.00 32.23 3.21
528 529 6.242508 TGTAATTAGCATTTTACGCACACA 57.757 33.333 0.00 0.00 32.23 3.72
529 530 7.734538 AATGTAATTAGCATTTTACGCACAC 57.265 32.000 7.19 0.00 32.46 3.82
530 531 8.023706 TGAAATGTAATTAGCATTTTACGCACA 58.976 29.630 18.60 12.24 43.87 4.57
531 532 8.388319 TGAAATGTAATTAGCATTTTACGCAC 57.612 30.769 18.60 10.74 43.87 5.34
532 533 8.454894 TCTGAAATGTAATTAGCATTTTACGCA 58.545 29.630 18.60 13.75 43.87 5.24
533 534 8.835467 TCTGAAATGTAATTAGCATTTTACGC 57.165 30.769 18.60 11.39 43.87 4.42
537 538 9.880157 AGCAATCTGAAATGTAATTAGCATTTT 57.120 25.926 18.60 7.75 43.87 1.82
548 549 9.342308 CCCTTCTTTATAGCAATCTGAAATGTA 57.658 33.333 0.00 0.00 0.00 2.29
549 550 7.836183 ACCCTTCTTTATAGCAATCTGAAATGT 59.164 33.333 0.00 0.00 0.00 2.71
550 551 8.230472 ACCCTTCTTTATAGCAATCTGAAATG 57.770 34.615 0.00 0.00 0.00 2.32
551 552 8.829373 AACCCTTCTTTATAGCAATCTGAAAT 57.171 30.769 0.00 0.00 0.00 2.17
552 553 9.747898 TTAACCCTTCTTTATAGCAATCTGAAA 57.252 29.630 0.00 0.00 0.00 2.69
553 554 9.920946 ATTAACCCTTCTTTATAGCAATCTGAA 57.079 29.630 0.00 0.00 0.00 3.02
554 555 9.920946 AATTAACCCTTCTTTATAGCAATCTGA 57.079 29.630 0.00 0.00 0.00 3.27
624 627 3.251479 ACTGAGCACAATTCGCATCTA 57.749 42.857 0.00 0.00 0.00 1.98
1086 1089 2.509336 CTTCGATCAACGCCCGCT 60.509 61.111 0.00 0.00 42.26 5.52
1134 1139 0.663269 CTCGCTGCACACGTAGAACA 60.663 55.000 0.00 0.00 0.00 3.18
1531 1536 7.951806 TCCTTCATAATTCATGCCTTTCCATAT 59.048 33.333 0.00 0.00 34.35 1.78
1751 1760 1.344114 GAATTTGGCCCAAGAGCAACA 59.656 47.619 0.00 0.00 0.00 3.33
1909 1918 6.831353 TCCGGAATAATTCAATTAGCTTCCAA 59.169 34.615 17.30 6.81 35.25 3.53
2347 2362 6.600388 ACCCTCCAAAATTTAAGTGCAAAAT 58.400 32.000 0.00 0.00 0.00 1.82


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.