Multiple sequence alignment - TraesCS3A01G517600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G517600 chr3A 100.000 2546 0 0 1 2546 734738116 734740661 0.000000e+00 4702.0
1 TraesCS3A01G517600 chr3D 96.263 1124 33 6 875 1995 604635689 604636806 0.000000e+00 1834.0
2 TraesCS3A01G517600 chr3D 88.470 477 43 7 1 471 604633506 604633976 1.320000e-157 566.0
3 TraesCS3A01G517600 chr3D 87.308 260 10 7 2146 2404 604636798 604637035 2.500000e-70 276.0
4 TraesCS3A01G517600 chr3D 87.121 132 3 3 472 603 604634040 604634157 1.230000e-28 137.0
5 TraesCS3A01G517600 chr3B 90.358 809 47 16 984 1784 811787775 811788560 0.000000e+00 1033.0
6 TraesCS3A01G517600 chr3B 97.761 268 6 0 612 879 663556691 663556424 1.780000e-126 462.0
7 TraesCS3A01G517600 chr3B 98.026 152 3 0 1995 2146 593917086 593916935 5.400000e-67 265.0
8 TraesCS3A01G517600 chr3B 95.000 60 1 1 557 614 811778710 811778769 2.700000e-15 93.5
9 TraesCS3A01G517600 chrUn 97.417 271 7 0 609 879 47459760 47460030 1.780000e-126 462.0
10 TraesCS3A01G517600 chrUn 98.684 152 2 0 1994 2145 61781904 61782055 1.160000e-68 270.0
11 TraesCS3A01G517600 chr5A 97.417 271 7 0 609 879 34705286 34705556 1.780000e-126 462.0
12 TraesCS3A01G517600 chr5A 96.739 276 8 1 612 887 696475242 696474968 2.310000e-125 459.0
13 TraesCS3A01G517600 chr1B 97.417 271 7 0 609 879 615614600 615614870 1.780000e-126 462.0
14 TraesCS3A01G517600 chr1A 97.761 268 6 0 612 879 342386234 342385967 1.780000e-126 462.0
15 TraesCS3A01G517600 chr6B 97.059 272 8 0 609 880 179470167 179470438 2.310000e-125 459.0
16 TraesCS3A01G517600 chr6B 78.769 471 86 13 4 468 716540973 716541435 1.140000e-78 303.0
17 TraesCS3A01G517600 chr7B 95.760 283 10 2 612 893 630140432 630140151 2.990000e-124 455.0
18 TraesCS3A01G517600 chr7B 79.274 468 84 13 11 471 104298915 104298454 5.290000e-82 315.0
19 TraesCS3A01G517600 chr4A 95.088 285 12 2 612 894 606756682 606756398 5.000000e-122 448.0
20 TraesCS3A01G517600 chr4A 97.590 83 2 0 2069 2151 621240292 621240210 2.640000e-30 143.0
21 TraesCS3A01G517600 chr7D 80.706 425 74 8 3 422 628135087 628134666 8.790000e-85 324.0
22 TraesCS3A01G517600 chr6D 79.114 474 91 8 3 471 29379502 29379032 1.140000e-83 320.0
23 TraesCS3A01G517600 chr4D 79.736 454 77 13 3 451 114426274 114426717 5.290000e-82 315.0
24 TraesCS3A01G517600 chr2D 78.903 474 91 8 3 471 639674923 639675392 1.900000e-81 313.0
25 TraesCS3A01G517600 chr5D 79.688 448 78 11 10 452 61484871 61485310 6.840000e-81 311.0
26 TraesCS3A01G517600 chr6A 78.814 472 89 11 11 476 617752269 617751803 8.850000e-80 307.0
27 TraesCS3A01G517600 chr7A 96.951 164 4 1 1987 2149 709711079 709711242 8.970000e-70 274.0
28 TraesCS3A01G517600 chr5B 84.932 146 22 0 1996 2141 433774580 433774435 5.680000e-32 148.0
29 TraesCS3A01G517600 chr2B 87.931 58 4 3 2411 2468 576803686 576803632 5.880000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G517600 chr3A 734738116 734740661 2545 False 4702.00 4702 100.0000 1 2546 1 chr3A.!!$F1 2545
1 TraesCS3A01G517600 chr3D 604633506 604637035 3529 False 703.25 1834 89.7905 1 2404 4 chr3D.!!$F1 2403
2 TraesCS3A01G517600 chr3B 811787775 811788560 785 False 1033.00 1033 90.3580 984 1784 1 chr3B.!!$F2 800

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
141 143 0.3199 GTGCTGCTCAGGAAGACGAA 60.32 55.0 0.0 0.0 0.0 3.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2099 3645 0.249155 GGCGGACGATTTATGGACGA 60.249 55.0 0.0 0.0 0.0 4.2 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
83 84 3.249189 TTGCCGGCAGGAGGACTT 61.249 61.111 30.75 0.00 41.02 3.01
87 88 2.657237 CGGCAGGAGGACTTCGTT 59.343 61.111 0.00 0.00 0.00 3.85
89 90 0.602905 CGGCAGGAGGACTTCGTTTT 60.603 55.000 0.00 0.00 0.00 2.43
94 95 4.254492 GCAGGAGGACTTCGTTTTTAGAT 58.746 43.478 0.00 0.00 0.00 1.98
141 143 0.319900 GTGCTGCTCAGGAAGACGAA 60.320 55.000 0.00 0.00 0.00 3.85
142 144 0.392706 TGCTGCTCAGGAAGACGAAA 59.607 50.000 0.00 0.00 0.00 3.46
143 145 1.002430 TGCTGCTCAGGAAGACGAAAT 59.998 47.619 0.00 0.00 0.00 2.17
146 148 1.347707 TGCTCAGGAAGACGAAATGGT 59.652 47.619 0.00 0.00 0.00 3.55
155 157 1.006832 GACGAAATGGTGGTGGATCG 58.993 55.000 0.00 0.00 36.45 3.69
211 213 1.226888 GCCCGGATGTCACGTCTAC 60.227 63.158 0.73 0.00 0.00 2.59
219 221 3.319405 GGATGTCACGTCTACCATCATCT 59.681 47.826 12.55 0.00 36.31 2.90
224 226 2.427095 CACGTCTACCATCATCTGTGGA 59.573 50.000 0.00 0.00 39.12 4.02
286 288 2.058798 TGCTTGATCTGTTCGTCGTTC 58.941 47.619 0.00 0.00 0.00 3.95
289 291 3.241804 GCTTGATCTGTTCGTCGTTCATC 60.242 47.826 0.00 0.00 0.00 2.92
290 292 3.850122 TGATCTGTTCGTCGTTCATCT 57.150 42.857 0.00 0.00 0.00 2.90
293 295 5.273944 TGATCTGTTCGTCGTTCATCTATG 58.726 41.667 0.00 0.00 0.00 2.23
295 297 5.055642 TCTGTTCGTCGTTCATCTATGTT 57.944 39.130 0.00 0.00 0.00 2.71
297 299 5.055642 TGTTCGTCGTTCATCTATGTTCT 57.944 39.130 0.00 0.00 0.00 3.01
299 301 5.344933 TGTTCGTCGTTCATCTATGTTCTTG 59.655 40.000 0.00 0.00 0.00 3.02
300 302 5.055642 TCGTCGTTCATCTATGTTCTTGT 57.944 39.130 0.00 0.00 0.00 3.16
303 308 5.220043 CGTCGTTCATCTATGTTCTTGTGTC 60.220 44.000 0.00 0.00 0.00 3.67
307 312 6.366061 CGTTCATCTATGTTCTTGTGTCTTCA 59.634 38.462 0.00 0.00 0.00 3.02
313 318 4.214986 TGTTCTTGTGTCTTCAGGTTGA 57.785 40.909 0.00 0.00 0.00 3.18
392 397 2.705658 CCTATGGGACCTTAGCATGACA 59.294 50.000 0.00 0.00 33.58 3.58
396 401 2.027192 TGGGACCTTAGCATGACAACTC 60.027 50.000 0.00 0.00 0.00 3.01
398 403 2.237392 GGACCTTAGCATGACAACTCCT 59.763 50.000 0.00 0.00 0.00 3.69
479 548 1.196808 GCGACTTCGGCTTGATTGAAA 59.803 47.619 0.02 0.00 40.23 2.69
483 552 4.613622 CGACTTCGGCTTGATTGAAAATGT 60.614 41.667 0.00 0.00 35.37 2.71
534 603 6.910536 AGTAAGTTCATTCTCATTAAGGCG 57.089 37.500 0.00 0.00 0.00 5.52
535 604 6.640518 AGTAAGTTCATTCTCATTAAGGCGA 58.359 36.000 0.00 0.00 0.00 5.54
536 605 5.803020 AAGTTCATTCTCATTAAGGCGAC 57.197 39.130 0.00 0.00 0.00 5.19
537 606 3.865745 AGTTCATTCTCATTAAGGCGACG 59.134 43.478 0.00 0.00 0.00 5.12
538 607 3.520290 TCATTCTCATTAAGGCGACGT 57.480 42.857 0.00 0.00 0.00 4.34
539 608 3.444916 TCATTCTCATTAAGGCGACGTC 58.555 45.455 5.18 5.18 0.00 4.34
540 609 3.119280 TCATTCTCATTAAGGCGACGTCA 60.119 43.478 17.16 0.00 0.00 4.35
541 610 3.520290 TTCTCATTAAGGCGACGTCAT 57.480 42.857 17.16 0.00 0.00 3.06
542 611 3.079960 TCTCATTAAGGCGACGTCATC 57.920 47.619 17.16 6.70 0.00 2.92
543 612 2.425668 TCTCATTAAGGCGACGTCATCA 59.574 45.455 17.16 0.00 0.00 3.07
544 613 3.119280 TCTCATTAAGGCGACGTCATCAA 60.119 43.478 17.16 2.09 0.00 2.57
545 614 3.591023 TCATTAAGGCGACGTCATCAAA 58.409 40.909 17.16 3.19 0.00 2.69
546 615 4.188462 TCATTAAGGCGACGTCATCAAAT 58.812 39.130 17.16 5.45 0.00 2.32
547 616 4.270084 TCATTAAGGCGACGTCATCAAATC 59.730 41.667 17.16 0.00 0.00 2.17
614 2152 8.888579 ACGGAAGGAATTGATTACAGTAATAG 57.111 34.615 5.75 0.00 0.00 1.73
615 2153 8.483758 ACGGAAGGAATTGATTACAGTAATAGT 58.516 33.333 5.75 0.00 0.00 2.12
617 2155 9.057089 GGAAGGAATTGATTACAGTAATAGTGG 57.943 37.037 5.75 0.00 0.00 4.00
618 2156 8.980481 AAGGAATTGATTACAGTAATAGTGGG 57.020 34.615 5.75 0.00 0.00 4.61
619 2157 8.331931 AGGAATTGATTACAGTAATAGTGGGA 57.668 34.615 5.75 0.00 0.00 4.37
621 2159 8.211629 GGAATTGATTACAGTAATAGTGGGAGT 58.788 37.037 5.75 0.00 0.00 3.85
629 2167 7.598759 ACAGTAATAGTGGGAGTAACATAGG 57.401 40.000 0.00 0.00 0.00 2.57
631 2169 8.284435 ACAGTAATAGTGGGAGTAACATAGGTA 58.716 37.037 0.00 0.00 0.00 3.08
632 2170 8.794553 CAGTAATAGTGGGAGTAACATAGGTAG 58.205 40.741 0.00 0.00 0.00 3.18
634 2172 9.799106 GTAATAGTGGGAGTAACATAGGTAGTA 57.201 37.037 0.00 0.00 0.00 1.82
637 2175 6.496743 AGTGGGAGTAACATAGGTAGTAACA 58.503 40.000 0.00 0.00 0.00 2.41
638 2176 7.130775 AGTGGGAGTAACATAGGTAGTAACAT 58.869 38.462 0.00 0.00 0.00 2.71
639 2177 8.284435 AGTGGGAGTAACATAGGTAGTAACATA 58.716 37.037 0.00 0.00 0.00 2.29
640 2178 8.574737 GTGGGAGTAACATAGGTAGTAACATAG 58.425 40.741 0.00 0.00 0.00 2.23
641 2179 8.505246 TGGGAGTAACATAGGTAGTAACATAGA 58.495 37.037 0.00 0.00 0.00 1.98
642 2180 9.531158 GGGAGTAACATAGGTAGTAACATAGAT 57.469 37.037 0.00 0.00 0.00 1.98
644 2182 9.843334 GAGTAACATAGGTAGTAACATAGATGC 57.157 37.037 0.00 0.00 0.00 3.91
645 2183 8.804204 AGTAACATAGGTAGTAACATAGATGCC 58.196 37.037 0.00 0.00 0.00 4.40
646 2184 7.612065 AACATAGGTAGTAACATAGATGCCA 57.388 36.000 0.00 0.00 0.00 4.92
647 2185 6.994221 ACATAGGTAGTAACATAGATGCCAC 58.006 40.000 0.00 0.00 0.00 5.01
648 2186 6.553476 ACATAGGTAGTAACATAGATGCCACA 59.447 38.462 0.00 0.00 0.00 4.17
649 2187 7.235606 ACATAGGTAGTAACATAGATGCCACAT 59.764 37.037 0.00 0.00 0.00 3.21
650 2188 8.749354 CATAGGTAGTAACATAGATGCCACATA 58.251 37.037 0.00 0.00 0.00 2.29
651 2189 7.612065 AGGTAGTAACATAGATGCCACATAA 57.388 36.000 0.00 0.00 0.00 1.90
652 2190 7.671302 AGGTAGTAACATAGATGCCACATAAG 58.329 38.462 0.00 0.00 0.00 1.73
653 2191 6.369065 GGTAGTAACATAGATGCCACATAAGC 59.631 42.308 0.00 0.00 0.00 3.09
654 2192 5.928976 AGTAACATAGATGCCACATAAGCA 58.071 37.500 0.00 0.00 45.94 3.91
659 2197 7.116075 ACATAGATGCCACATAAGCAAAATT 57.884 32.000 0.00 0.00 44.83 1.82
660 2198 6.982141 ACATAGATGCCACATAAGCAAAATTG 59.018 34.615 0.00 0.00 44.83 2.32
661 2199 4.761975 AGATGCCACATAAGCAAAATTGG 58.238 39.130 0.00 0.00 44.83 3.16
662 2200 4.223477 AGATGCCACATAAGCAAAATTGGT 59.777 37.500 0.00 0.00 44.83 3.67
663 2201 3.661944 TGCCACATAAGCAAAATTGGTG 58.338 40.909 0.00 0.00 39.13 4.17
664 2202 3.323115 TGCCACATAAGCAAAATTGGTGA 59.677 39.130 0.00 0.00 39.13 4.02
665 2203 4.020396 TGCCACATAAGCAAAATTGGTGAT 60.020 37.500 0.00 0.00 39.13 3.06
670 2208 2.460757 AGCAAAATTGGTGATGTGGC 57.539 45.000 0.00 0.00 37.53 5.01
671 2209 1.693062 AGCAAAATTGGTGATGTGGCA 59.307 42.857 0.00 0.00 37.53 4.92
672 2210 2.104451 AGCAAAATTGGTGATGTGGCAA 59.896 40.909 0.00 0.00 37.53 4.52
673 2211 2.481185 GCAAAATTGGTGATGTGGCAAG 59.519 45.455 0.00 0.00 0.00 4.01
674 2212 3.731089 CAAAATTGGTGATGTGGCAAGT 58.269 40.909 0.00 0.00 0.00 3.16
675 2213 4.798924 GCAAAATTGGTGATGTGGCAAGTA 60.799 41.667 0.00 0.00 0.00 2.24
676 2214 4.789012 AAATTGGTGATGTGGCAAGTAG 57.211 40.909 0.00 0.00 0.00 2.57
677 2215 2.949177 TTGGTGATGTGGCAAGTAGT 57.051 45.000 0.00 0.00 0.00 2.73
678 2216 2.949177 TGGTGATGTGGCAAGTAGTT 57.051 45.000 0.00 0.00 0.00 2.24
679 2217 4.359434 TTGGTGATGTGGCAAGTAGTTA 57.641 40.909 0.00 0.00 0.00 2.24
680 2218 4.359434 TGGTGATGTGGCAAGTAGTTAA 57.641 40.909 0.00 0.00 0.00 2.01
681 2219 4.917385 TGGTGATGTGGCAAGTAGTTAAT 58.083 39.130 0.00 0.00 0.00 1.40
682 2220 4.699735 TGGTGATGTGGCAAGTAGTTAATG 59.300 41.667 0.00 0.00 0.00 1.90
683 2221 4.941263 GGTGATGTGGCAAGTAGTTAATGA 59.059 41.667 0.00 0.00 0.00 2.57
684 2222 5.065218 GGTGATGTGGCAAGTAGTTAATGAG 59.935 44.000 0.00 0.00 0.00 2.90
685 2223 5.065218 GTGATGTGGCAAGTAGTTAATGAGG 59.935 44.000 0.00 0.00 0.00 3.86
686 2224 4.901197 TGTGGCAAGTAGTTAATGAGGA 57.099 40.909 0.00 0.00 0.00 3.71
687 2225 4.832248 TGTGGCAAGTAGTTAATGAGGAG 58.168 43.478 0.00 0.00 0.00 3.69
688 2226 4.530553 TGTGGCAAGTAGTTAATGAGGAGA 59.469 41.667 0.00 0.00 0.00 3.71
689 2227 5.112686 GTGGCAAGTAGTTAATGAGGAGAG 58.887 45.833 0.00 0.00 0.00 3.20
690 2228 5.023452 TGGCAAGTAGTTAATGAGGAGAGA 58.977 41.667 0.00 0.00 0.00 3.10
691 2229 5.127845 TGGCAAGTAGTTAATGAGGAGAGAG 59.872 44.000 0.00 0.00 0.00 3.20
692 2230 5.452636 GGCAAGTAGTTAATGAGGAGAGAGG 60.453 48.000 0.00 0.00 0.00 3.69
693 2231 5.596845 CAAGTAGTTAATGAGGAGAGAGGC 58.403 45.833 0.00 0.00 0.00 4.70
694 2232 4.873010 AGTAGTTAATGAGGAGAGAGGCA 58.127 43.478 0.00 0.00 0.00 4.75
695 2233 5.273208 AGTAGTTAATGAGGAGAGAGGCAA 58.727 41.667 0.00 0.00 0.00 4.52
696 2234 5.721960 AGTAGTTAATGAGGAGAGAGGCAAA 59.278 40.000 0.00 0.00 0.00 3.68
697 2235 5.707066 AGTTAATGAGGAGAGAGGCAAAT 57.293 39.130 0.00 0.00 0.00 2.32
698 2236 6.814954 AGTTAATGAGGAGAGAGGCAAATA 57.185 37.500 0.00 0.00 0.00 1.40
699 2237 6.825610 AGTTAATGAGGAGAGAGGCAAATAG 58.174 40.000 0.00 0.00 0.00 1.73
700 2238 6.613271 AGTTAATGAGGAGAGAGGCAAATAGA 59.387 38.462 0.00 0.00 0.00 1.98
701 2239 5.549742 AATGAGGAGAGAGGCAAATAGAG 57.450 43.478 0.00 0.00 0.00 2.43
702 2240 3.987745 TGAGGAGAGAGGCAAATAGAGT 58.012 45.455 0.00 0.00 0.00 3.24
703 2241 5.130705 TGAGGAGAGAGGCAAATAGAGTA 57.869 43.478 0.00 0.00 0.00 2.59
704 2242 5.519808 TGAGGAGAGAGGCAAATAGAGTAA 58.480 41.667 0.00 0.00 0.00 2.24
705 2243 5.361285 TGAGGAGAGAGGCAAATAGAGTAAC 59.639 44.000 0.00 0.00 0.00 2.50
706 2244 5.273208 AGGAGAGAGGCAAATAGAGTAACA 58.727 41.667 0.00 0.00 0.00 2.41
707 2245 5.902431 AGGAGAGAGGCAAATAGAGTAACAT 59.098 40.000 0.00 0.00 0.00 2.71
708 2246 7.069986 AGGAGAGAGGCAAATAGAGTAACATA 58.930 38.462 0.00 0.00 0.00 2.29
709 2247 7.565398 AGGAGAGAGGCAAATAGAGTAACATAA 59.435 37.037 0.00 0.00 0.00 1.90
710 2248 8.371699 GGAGAGAGGCAAATAGAGTAACATAAT 58.628 37.037 0.00 0.00 0.00 1.28
729 2267 8.479313 ACATAATATGTTACCATCACATAGCG 57.521 34.615 0.00 0.00 41.63 4.26
730 2268 7.549134 ACATAATATGTTACCATCACATAGCGG 59.451 37.037 0.00 0.00 41.63 5.52
731 2269 3.838244 ATGTTACCATCACATAGCGGT 57.162 42.857 0.00 0.00 32.88 5.68
732 2270 3.620427 TGTTACCATCACATAGCGGTT 57.380 42.857 0.00 0.00 32.81 4.44
733 2271 3.945346 TGTTACCATCACATAGCGGTTT 58.055 40.909 0.00 0.00 32.81 3.27
734 2272 3.936453 TGTTACCATCACATAGCGGTTTC 59.064 43.478 0.00 0.00 32.81 2.78
735 2273 2.038387 ACCATCACATAGCGGTTTCC 57.962 50.000 0.00 0.00 0.00 3.13
736 2274 1.280710 ACCATCACATAGCGGTTTCCA 59.719 47.619 0.00 0.00 0.00 3.53
737 2275 2.290641 ACCATCACATAGCGGTTTCCAA 60.291 45.455 0.00 0.00 0.00 3.53
738 2276 2.951642 CCATCACATAGCGGTTTCCAAT 59.048 45.455 0.00 0.00 0.00 3.16
739 2277 3.243168 CCATCACATAGCGGTTTCCAATG 60.243 47.826 0.00 0.00 0.00 2.82
740 2278 3.066291 TCACATAGCGGTTTCCAATGT 57.934 42.857 0.00 0.00 0.00 2.71
741 2279 4.209307 TCACATAGCGGTTTCCAATGTA 57.791 40.909 0.00 0.00 0.00 2.29
742 2280 4.776349 TCACATAGCGGTTTCCAATGTAT 58.224 39.130 0.00 0.00 0.00 2.29
743 2281 5.919755 TCACATAGCGGTTTCCAATGTATA 58.080 37.500 0.00 0.00 0.00 1.47
744 2282 6.350103 TCACATAGCGGTTTCCAATGTATAA 58.650 36.000 0.00 0.00 0.00 0.98
745 2283 6.995686 TCACATAGCGGTTTCCAATGTATAAT 59.004 34.615 0.00 0.00 0.00 1.28
746 2284 8.151596 TCACATAGCGGTTTCCAATGTATAATA 58.848 33.333 0.00 0.00 0.00 0.98
747 2285 8.779303 CACATAGCGGTTTCCAATGTATAATAA 58.221 33.333 0.00 0.00 0.00 1.40
748 2286 9.344772 ACATAGCGGTTTCCAATGTATAATAAA 57.655 29.630 0.00 0.00 0.00 1.40
751 2289 8.691661 AGCGGTTTCCAATGTATAATAAATCT 57.308 30.769 0.00 0.00 0.00 2.40
752 2290 9.787435 AGCGGTTTCCAATGTATAATAAATCTA 57.213 29.630 0.00 0.00 0.00 1.98
753 2291 9.821662 GCGGTTTCCAATGTATAATAAATCTAC 57.178 33.333 0.00 0.00 0.00 2.59
785 2323 9.855021 AATAAATGAAAGCAACTATGTTACCAC 57.145 29.630 0.00 0.00 0.00 4.16
786 2324 6.892658 AATGAAAGCAACTATGTTACCACA 57.107 33.333 0.00 0.00 37.31 4.17
787 2325 5.682943 TGAAAGCAACTATGTTACCACAC 57.317 39.130 0.00 0.00 35.03 3.82
788 2326 4.517453 TGAAAGCAACTATGTTACCACACC 59.483 41.667 0.00 0.00 35.03 4.16
789 2327 4.367039 AAGCAACTATGTTACCACACCT 57.633 40.909 0.00 0.00 35.03 4.00
790 2328 5.492855 AAGCAACTATGTTACCACACCTA 57.507 39.130 0.00 0.00 35.03 3.08
791 2329 5.693769 AGCAACTATGTTACCACACCTAT 57.306 39.130 0.00 0.00 35.03 2.57
792 2330 5.428253 AGCAACTATGTTACCACACCTATG 58.572 41.667 0.00 0.00 35.03 2.23
793 2331 5.188948 AGCAACTATGTTACCACACCTATGA 59.811 40.000 0.00 0.00 35.03 2.15
794 2332 5.293569 GCAACTATGTTACCACACCTATGAC 59.706 44.000 0.00 0.00 35.03 3.06
795 2333 6.403049 CAACTATGTTACCACACCTATGACA 58.597 40.000 0.00 0.00 35.03 3.58
796 2334 5.974108 ACTATGTTACCACACCTATGACAC 58.026 41.667 0.00 0.00 35.03 3.67
797 2335 5.720041 ACTATGTTACCACACCTATGACACT 59.280 40.000 0.00 0.00 35.03 3.55
798 2336 6.893554 ACTATGTTACCACACCTATGACACTA 59.106 38.462 0.00 0.00 35.03 2.74
799 2337 5.395682 TGTTACCACACCTATGACACTAC 57.604 43.478 0.00 0.00 0.00 2.73
800 2338 4.221262 TGTTACCACACCTATGACACTACC 59.779 45.833 0.00 0.00 0.00 3.18
801 2339 2.185387 ACCACACCTATGACACTACCC 58.815 52.381 0.00 0.00 0.00 3.69
802 2340 2.184533 CCACACCTATGACACTACCCA 58.815 52.381 0.00 0.00 0.00 4.51
803 2341 2.093658 CCACACCTATGACACTACCCAC 60.094 54.545 0.00 0.00 0.00 4.61
804 2342 2.832129 CACACCTATGACACTACCCACT 59.168 50.000 0.00 0.00 0.00 4.00
805 2343 4.021229 CACACCTATGACACTACCCACTA 58.979 47.826 0.00 0.00 0.00 2.74
806 2344 4.649674 CACACCTATGACACTACCCACTAT 59.350 45.833 0.00 0.00 0.00 2.12
807 2345 4.649674 ACACCTATGACACTACCCACTATG 59.350 45.833 0.00 0.00 0.00 2.23
808 2346 4.893524 CACCTATGACACTACCCACTATGA 59.106 45.833 0.00 0.00 0.00 2.15
809 2347 5.362717 CACCTATGACACTACCCACTATGAA 59.637 44.000 0.00 0.00 0.00 2.57
810 2348 5.598830 ACCTATGACACTACCCACTATGAAG 59.401 44.000 0.00 0.00 0.00 3.02
811 2349 5.011125 CCTATGACACTACCCACTATGAAGG 59.989 48.000 0.00 0.00 0.00 3.46
812 2350 3.786553 TGACACTACCCACTATGAAGGT 58.213 45.455 0.00 0.00 37.69 3.50
813 2351 4.938028 TGACACTACCCACTATGAAGGTA 58.062 43.478 0.00 0.00 35.02 3.08
820 2358 7.598759 CTACCCACTATGAAGGTAGTAACAT 57.401 40.000 7.19 0.00 45.39 2.71
821 2359 8.701908 CTACCCACTATGAAGGTAGTAACATA 57.298 38.462 7.19 0.00 45.39 2.29
822 2360 7.598759 ACCCACTATGAAGGTAGTAACATAG 57.401 40.000 0.00 0.00 44.14 2.23
823 2361 7.359849 ACCCACTATGAAGGTAGTAACATAGA 58.640 38.462 16.37 0.00 42.41 1.98
824 2362 7.287235 ACCCACTATGAAGGTAGTAACATAGAC 59.713 40.741 16.37 0.00 42.41 2.59
825 2363 7.506261 CCCACTATGAAGGTAGTAACATAGACT 59.494 40.741 16.37 0.00 42.41 3.24
826 2364 9.570468 CCACTATGAAGGTAGTAACATAGACTA 57.430 37.037 16.37 0.00 42.41 2.59
864 2402 8.558973 TGTTACTAGTCTAAGTTACTCTCCAC 57.441 38.462 0.00 0.00 31.82 4.02
865 2403 8.381636 TGTTACTAGTCTAAGTTACTCTCCACT 58.618 37.037 0.00 0.00 31.82 4.00
866 2404 9.883142 GTTACTAGTCTAAGTTACTCTCCACTA 57.117 37.037 0.00 0.00 0.00 2.74
868 2406 8.967664 ACTAGTCTAAGTTACTCTCCACTATG 57.032 38.462 0.00 0.00 0.00 2.23
869 2407 8.770322 ACTAGTCTAAGTTACTCTCCACTATGA 58.230 37.037 0.00 0.00 0.00 2.15
870 2408 7.868906 AGTCTAAGTTACTCTCCACTATGAC 57.131 40.000 0.00 0.00 0.00 3.06
871 2409 6.829811 AGTCTAAGTTACTCTCCACTATGACC 59.170 42.308 0.00 0.00 31.22 4.02
872 2410 6.602406 GTCTAAGTTACTCTCCACTATGACCA 59.398 42.308 0.00 0.00 0.00 4.02
873 2411 5.923733 AAGTTACTCTCCACTATGACCAG 57.076 43.478 0.00 0.00 0.00 4.00
912 2450 7.563888 TGTGACTAACGAGTAGCTGTATAAT 57.436 36.000 0.00 0.00 35.45 1.28
914 2452 9.112725 TGTGACTAACGAGTAGCTGTATAATTA 57.887 33.333 0.00 0.00 35.45 1.40
915 2453 9.596677 GTGACTAACGAGTAGCTGTATAATTAG 57.403 37.037 0.00 0.38 35.45 1.73
916 2454 8.781196 TGACTAACGAGTAGCTGTATAATTAGG 58.219 37.037 0.00 0.00 35.45 2.69
917 2455 8.108551 ACTAACGAGTAGCTGTATAATTAGGG 57.891 38.462 0.00 0.00 32.65 3.53
929 2467 7.581464 GCTGTATAATTAGGGCATGTCATCCTA 60.581 40.741 0.00 1.12 32.46 2.94
1039 2577 2.029844 GGCAGTGTCCTCTTCGTGC 61.030 63.158 0.00 0.00 0.00 5.34
1058 2596 2.837291 CTCCGCCCTCCTCCTCTG 60.837 72.222 0.00 0.00 0.00 3.35
1260 2798 1.684386 CCACCAGCACCAAAGCCAAA 61.684 55.000 0.00 0.00 34.23 3.28
1552 3090 5.675827 GCCTTACTCCAAGTCTAGAACGTAC 60.676 48.000 0.00 0.00 31.77 3.67
1553 3091 5.647225 CCTTACTCCAAGTCTAGAACGTACT 59.353 44.000 0.00 0.00 31.77 2.73
1654 3200 7.658261 ACTAATTTTGGCAGAAAGTAAGGTTC 58.342 34.615 0.00 0.00 0.00 3.62
1655 3201 4.561735 TTTTGGCAGAAAGTAAGGTTCG 57.438 40.909 0.00 0.00 0.00 3.95
1728 3274 1.337821 GCACTAGTCGGAGTTGAACG 58.662 55.000 0.00 0.00 0.00 3.95
1780 3326 4.178956 AGGCTTGAGTTTAGGGTTCAAA 57.821 40.909 0.00 0.00 31.11 2.69
1788 3334 6.843752 TGAGTTTAGGGTTCAAACATAAGGA 58.156 36.000 0.00 0.00 38.16 3.36
1821 3367 7.274904 CCGTTTGTTCTATTCTCGTTCTGAATA 59.725 37.037 0.00 0.00 35.90 1.75
1835 3381 5.163953 CGTTCTGAATAAGCACGAGACATTT 60.164 40.000 0.00 0.00 46.84 2.32
1854 3400 9.690913 AGACATTTTATTCTCATCCTCAAATGA 57.309 29.630 8.34 0.00 35.22 2.57
1856 3402 9.246670 ACATTTTATTCTCATCCTCAAATGACA 57.753 29.630 8.34 0.00 35.22 3.58
1873 3419 7.495606 TCAAATGACACGCAGATACTAATTCAT 59.504 33.333 0.00 0.00 0.00 2.57
1934 3480 5.359009 TCTCATCTTCCAGCCAATCAAATTC 59.641 40.000 0.00 0.00 0.00 2.17
1941 3487 1.205417 AGCCAATCAAATTCAAGGGCG 59.795 47.619 0.00 0.00 44.40 6.13
1948 3494 4.231718 TCAAATTCAAGGGCGTTACAAC 57.768 40.909 0.00 0.00 0.00 3.32
2007 3553 4.981806 AAAAAGTTTGAGCACTGCTACA 57.018 36.364 2.71 1.42 39.88 2.74
2008 3554 3.971032 AAAGTTTGAGCACTGCTACAC 57.029 42.857 2.71 1.22 39.88 2.90
2009 3555 2.620251 AGTTTGAGCACTGCTACACA 57.380 45.000 2.71 0.00 39.88 3.72
2025 3571 5.417266 TGCTACACAGATGATATCCTAGAGC 59.583 44.000 0.00 0.00 0.00 4.09
2026 3572 5.163561 GCTACACAGATGATATCCTAGAGCC 60.164 48.000 0.00 0.00 0.00 4.70
2027 3573 3.761218 ACACAGATGATATCCTAGAGCCG 59.239 47.826 0.00 0.00 0.00 5.52
2028 3574 4.013050 CACAGATGATATCCTAGAGCCGA 58.987 47.826 0.00 0.00 0.00 5.54
2029 3575 4.644234 CACAGATGATATCCTAGAGCCGAT 59.356 45.833 0.00 0.00 0.00 4.18
2030 3576 5.126869 CACAGATGATATCCTAGAGCCGATT 59.873 44.000 0.00 0.00 0.00 3.34
2031 3577 5.719085 ACAGATGATATCCTAGAGCCGATTT 59.281 40.000 0.00 0.00 0.00 2.17
2032 3578 6.892456 ACAGATGATATCCTAGAGCCGATTTA 59.108 38.462 0.00 0.00 0.00 1.40
2033 3579 7.563188 ACAGATGATATCCTAGAGCCGATTTAT 59.437 37.037 0.00 0.00 0.00 1.40
2034 3580 7.866898 CAGATGATATCCTAGAGCCGATTTATG 59.133 40.741 0.00 0.00 0.00 1.90
2035 3581 5.907207 TGATATCCTAGAGCCGATTTATGC 58.093 41.667 0.00 0.00 0.00 3.14
2036 3582 5.422012 TGATATCCTAGAGCCGATTTATGCA 59.578 40.000 0.00 0.00 0.00 3.96
2037 3583 3.386768 TCCTAGAGCCGATTTATGCAC 57.613 47.619 0.00 0.00 0.00 4.57
2038 3584 2.061773 CCTAGAGCCGATTTATGCACG 58.938 52.381 0.00 0.00 0.00 5.34
2039 3585 2.288213 CCTAGAGCCGATTTATGCACGA 60.288 50.000 0.00 0.00 0.00 4.35
2040 3586 1.571919 AGAGCCGATTTATGCACGAC 58.428 50.000 0.00 0.00 0.00 4.34
2041 3587 1.134818 AGAGCCGATTTATGCACGACA 60.135 47.619 0.00 0.00 0.00 4.35
2042 3588 1.004927 GAGCCGATTTATGCACGACAC 60.005 52.381 0.00 0.00 0.00 3.67
2043 3589 0.315059 GCCGATTTATGCACGACACG 60.315 55.000 0.00 0.00 0.00 4.49
2044 3590 0.996462 CCGATTTATGCACGACACGT 59.004 50.000 0.00 0.00 42.36 4.49
2053 3599 4.072913 ACGACACGTGATCGATGC 57.927 55.556 32.17 11.41 42.25 3.91
2054 3600 1.516386 ACGACACGTGATCGATGCC 60.516 57.895 32.17 10.14 42.25 4.40
2055 3601 1.516169 CGACACGTGATCGATGCCA 60.516 57.895 25.01 0.00 42.25 4.92
2056 3602 0.871592 CGACACGTGATCGATGCCAT 60.872 55.000 25.01 0.00 42.25 4.40
2057 3603 0.855349 GACACGTGATCGATGCCATC 59.145 55.000 25.01 0.58 40.62 3.51
2058 3604 0.530650 ACACGTGATCGATGCCATCC 60.531 55.000 25.01 0.00 40.62 3.51
2059 3605 0.530431 CACGTGATCGATGCCATCCA 60.530 55.000 10.90 0.00 40.62 3.41
2060 3606 0.394192 ACGTGATCGATGCCATCCAT 59.606 50.000 0.54 0.00 40.62 3.41
2061 3607 1.073964 CGTGATCGATGCCATCCATC 58.926 55.000 0.54 5.45 45.58 3.51
2072 3618 1.396653 CCATCCATCACTTTGGCTCC 58.603 55.000 0.00 0.00 36.66 4.70
2073 3619 1.341285 CCATCCATCACTTTGGCTCCA 60.341 52.381 0.00 0.00 36.66 3.86
2074 3620 2.662866 CATCCATCACTTTGGCTCCAT 58.337 47.619 0.00 0.00 36.66 3.41
2075 3621 2.133281 TCCATCACTTTGGCTCCATG 57.867 50.000 0.00 0.00 36.66 3.66
2076 3622 1.634973 TCCATCACTTTGGCTCCATGA 59.365 47.619 0.00 0.00 36.66 3.07
2077 3623 2.022195 CCATCACTTTGGCTCCATGAG 58.978 52.381 0.00 0.00 0.00 2.90
2078 3624 2.619849 CCATCACTTTGGCTCCATGAGT 60.620 50.000 0.00 0.00 31.39 3.41
2079 3625 2.957402 TCACTTTGGCTCCATGAGTT 57.043 45.000 0.00 0.00 31.39 3.01
2080 3626 4.264253 CATCACTTTGGCTCCATGAGTTA 58.736 43.478 0.00 0.00 31.39 2.24
2081 3627 3.942829 TCACTTTGGCTCCATGAGTTAG 58.057 45.455 0.00 0.00 31.39 2.34
2082 3628 3.582647 TCACTTTGGCTCCATGAGTTAGA 59.417 43.478 0.00 0.00 31.39 2.10
2083 3629 3.937706 CACTTTGGCTCCATGAGTTAGAG 59.062 47.826 0.00 0.00 31.39 2.43
2087 3633 2.926778 GCTCCATGAGTTAGAGCCAT 57.073 50.000 9.11 0.00 45.83 4.40
2088 3634 2.765122 GCTCCATGAGTTAGAGCCATC 58.235 52.381 9.11 0.00 45.83 3.51
2089 3635 2.865670 GCTCCATGAGTTAGAGCCATCG 60.866 54.545 9.11 0.00 45.83 3.84
2090 3636 2.625314 CTCCATGAGTTAGAGCCATCGA 59.375 50.000 0.00 0.00 0.00 3.59
2091 3637 3.234353 TCCATGAGTTAGAGCCATCGAT 58.766 45.455 0.00 0.00 0.00 3.59
2092 3638 3.256879 TCCATGAGTTAGAGCCATCGATC 59.743 47.826 0.00 0.00 0.00 3.69
2093 3639 3.006217 CCATGAGTTAGAGCCATCGATCA 59.994 47.826 0.00 0.00 0.00 2.92
2094 3640 3.717400 TGAGTTAGAGCCATCGATCAC 57.283 47.619 0.00 0.00 0.00 3.06
2095 3641 3.023832 TGAGTTAGAGCCATCGATCACA 58.976 45.455 0.00 0.00 0.00 3.58
2096 3642 3.067320 TGAGTTAGAGCCATCGATCACAG 59.933 47.826 0.00 0.00 0.00 3.66
2097 3643 2.131183 GTTAGAGCCATCGATCACAGC 58.869 52.381 0.00 0.00 0.00 4.40
2098 3644 1.402787 TAGAGCCATCGATCACAGCA 58.597 50.000 0.00 0.00 0.00 4.41
2099 3645 0.757512 AGAGCCATCGATCACAGCAT 59.242 50.000 0.00 0.00 0.00 3.79
2100 3646 1.146637 GAGCCATCGATCACAGCATC 58.853 55.000 0.00 0.00 0.00 3.91
2101 3647 0.599466 AGCCATCGATCACAGCATCG 60.599 55.000 0.00 0.00 45.91 3.84
2102 3648 0.877649 GCCATCGATCACAGCATCGT 60.878 55.000 0.00 0.00 44.99 3.73
2103 3649 1.135046 CCATCGATCACAGCATCGTC 58.865 55.000 0.00 0.00 44.99 4.20
2104 3650 1.135046 CATCGATCACAGCATCGTCC 58.865 55.000 0.00 0.00 44.99 4.79
2105 3651 0.746659 ATCGATCACAGCATCGTCCA 59.253 50.000 0.00 0.00 44.99 4.02
2106 3652 0.746659 TCGATCACAGCATCGTCCAT 59.253 50.000 4.34 0.00 44.99 3.41
2107 3653 1.953686 TCGATCACAGCATCGTCCATA 59.046 47.619 4.34 0.00 44.99 2.74
2108 3654 2.360801 TCGATCACAGCATCGTCCATAA 59.639 45.455 4.34 0.00 44.99 1.90
2109 3655 3.123050 CGATCACAGCATCGTCCATAAA 58.877 45.455 0.00 0.00 40.72 1.40
2110 3656 3.742882 CGATCACAGCATCGTCCATAAAT 59.257 43.478 0.00 0.00 40.72 1.40
2111 3657 4.143242 CGATCACAGCATCGTCCATAAATC 60.143 45.833 0.00 0.00 40.72 2.17
2112 3658 3.123050 TCACAGCATCGTCCATAAATCG 58.877 45.455 0.00 0.00 0.00 3.34
2113 3659 2.866156 CACAGCATCGTCCATAAATCGT 59.134 45.455 0.00 0.00 0.00 3.73
2114 3660 3.060272 CACAGCATCGTCCATAAATCGTC 60.060 47.826 0.00 0.00 0.00 4.20
2115 3661 2.476619 CAGCATCGTCCATAAATCGTCC 59.523 50.000 0.00 0.00 0.00 4.79
2116 3662 1.455786 GCATCGTCCATAAATCGTCCG 59.544 52.381 0.00 0.00 0.00 4.79
2117 3663 1.455786 CATCGTCCATAAATCGTCCGC 59.544 52.381 0.00 0.00 0.00 5.54
2118 3664 0.249155 TCGTCCATAAATCGTCCGCC 60.249 55.000 0.00 0.00 0.00 6.13
2119 3665 0.528901 CGTCCATAAATCGTCCGCCA 60.529 55.000 0.00 0.00 0.00 5.69
2120 3666 1.658994 GTCCATAAATCGTCCGCCAA 58.341 50.000 0.00 0.00 0.00 4.52
2121 3667 1.597663 GTCCATAAATCGTCCGCCAAG 59.402 52.381 0.00 0.00 0.00 3.61
2122 3668 0.944386 CCATAAATCGTCCGCCAAGG 59.056 55.000 0.00 0.00 42.97 3.61
2123 3669 1.663695 CATAAATCGTCCGCCAAGGT 58.336 50.000 0.00 0.00 41.99 3.50
2124 3670 1.330521 CATAAATCGTCCGCCAAGGTG 59.669 52.381 0.00 0.00 41.99 4.00
2125 3671 0.322322 TAAATCGTCCGCCAAGGTGT 59.678 50.000 0.00 0.00 41.99 4.16
2126 3672 0.953960 AAATCGTCCGCCAAGGTGTC 60.954 55.000 0.00 0.00 41.99 3.67
2127 3673 3.642778 ATCGTCCGCCAAGGTGTCG 62.643 63.158 0.00 3.93 41.99 4.35
2128 3674 4.657824 CGTCCGCCAAGGTGTCGT 62.658 66.667 0.00 0.00 41.99 4.34
2129 3675 3.041940 GTCCGCCAAGGTGTCGTG 61.042 66.667 0.00 0.00 41.99 4.35
2130 3676 3.542676 TCCGCCAAGGTGTCGTGT 61.543 61.111 0.00 0.00 41.99 4.49
2131 3677 3.345808 CCGCCAAGGTGTCGTGTG 61.346 66.667 0.00 0.00 34.51 3.82
2132 3678 4.012895 CGCCAAGGTGTCGTGTGC 62.013 66.667 0.00 0.00 0.00 4.57
2133 3679 2.899838 GCCAAGGTGTCGTGTGCA 60.900 61.111 0.00 0.00 0.00 4.57
2134 3680 3.022287 CCAAGGTGTCGTGTGCAC 58.978 61.111 10.75 10.75 36.22 4.57
2135 3681 1.817520 CCAAGGTGTCGTGTGCACA 60.818 57.895 17.42 17.42 38.51 4.57
2136 3682 1.643292 CAAGGTGTCGTGTGCACAG 59.357 57.895 22.40 14.50 38.51 3.66
2137 3683 1.089481 CAAGGTGTCGTGTGCACAGT 61.089 55.000 22.40 0.00 38.51 3.55
2138 3684 0.462375 AAGGTGTCGTGTGCACAGTA 59.538 50.000 22.40 8.54 38.51 2.74
2139 3685 0.462375 AGGTGTCGTGTGCACAGTAA 59.538 50.000 22.40 5.64 38.51 2.24
2140 3686 1.070134 AGGTGTCGTGTGCACAGTAAT 59.930 47.619 22.40 0.00 38.51 1.89
2141 3687 2.297880 AGGTGTCGTGTGCACAGTAATA 59.702 45.455 22.40 4.01 38.51 0.98
2142 3688 3.056107 AGGTGTCGTGTGCACAGTAATAT 60.056 43.478 22.40 0.76 38.51 1.28
2143 3689 3.306166 GGTGTCGTGTGCACAGTAATATC 59.694 47.826 22.40 5.45 38.51 1.63
2144 3690 3.001070 GTGTCGTGTGCACAGTAATATCG 60.001 47.826 22.40 18.11 36.88 2.92
2199 3745 5.253330 TCAGAAGCCGATATTTGTTTCCTT 58.747 37.500 0.00 0.00 0.00 3.36
2208 3754 7.466050 GCCGATATTTGTTTCCTTTCAGACTAG 60.466 40.741 0.00 0.00 0.00 2.57
2209 3755 7.402640 CGATATTTGTTTCCTTTCAGACTAGC 58.597 38.462 0.00 0.00 0.00 3.42
2220 3766 1.815421 AGACTAGCGCATTTGGCCG 60.815 57.895 11.47 0.00 40.31 6.13
2237 3783 0.921347 CCGTACGATTGAAAGAGGCG 59.079 55.000 18.76 0.00 0.00 5.52
2242 3788 1.425428 GATTGAAAGAGGCGTGGCG 59.575 57.895 0.00 0.00 0.00 5.69
2284 3830 2.586792 GCGGCTCTCTGGGTGATT 59.413 61.111 0.00 0.00 0.00 2.57
2287 3833 1.617018 CGGCTCTCTGGGTGATTCCA 61.617 60.000 0.00 0.00 38.11 3.53
2288 3834 0.620556 GGCTCTCTGGGTGATTCCAA 59.379 55.000 0.00 0.00 36.21 3.53
2289 3835 1.004745 GGCTCTCTGGGTGATTCCAAA 59.995 52.381 0.00 0.00 36.21 3.28
2290 3836 2.357569 GGCTCTCTGGGTGATTCCAAAT 60.358 50.000 0.00 0.00 36.21 2.32
2291 3837 2.948315 GCTCTCTGGGTGATTCCAAATC 59.052 50.000 0.00 0.00 36.21 2.17
2292 3838 3.623203 GCTCTCTGGGTGATTCCAAATCA 60.623 47.826 0.00 0.00 36.21 2.57
2293 3839 4.592942 CTCTCTGGGTGATTCCAAATCAA 58.407 43.478 4.05 0.00 36.21 2.57
2294 3840 4.996793 TCTCTGGGTGATTCCAAATCAAA 58.003 39.130 4.05 0.00 36.21 2.69
2295 3841 5.582953 TCTCTGGGTGATTCCAAATCAAAT 58.417 37.500 4.05 0.00 36.21 2.32
2296 3842 6.018469 TCTCTGGGTGATTCCAAATCAAATT 58.982 36.000 4.05 0.00 36.21 1.82
2297 3843 6.040209 TCTGGGTGATTCCAAATCAAATTG 57.960 37.500 4.05 0.00 36.21 2.32
2316 3862 1.656441 GATCCGGCAATGCACATCC 59.344 57.895 7.79 0.00 0.00 3.51
2386 3932 9.525409 GCGAAATTATGAGTAGTTTCCTAGTAA 57.475 33.333 0.00 0.00 34.71 2.24
2428 3974 2.789409 AATCCTTTTCTGAGGTCGGG 57.211 50.000 0.00 0.00 38.04 5.14
2429 3975 0.253327 ATCCTTTTCTGAGGTCGGGC 59.747 55.000 0.00 0.00 38.04 6.13
2430 3976 0.836400 TCCTTTTCTGAGGTCGGGCT 60.836 55.000 0.00 0.00 38.04 5.19
2431 3977 0.391793 CCTTTTCTGAGGTCGGGCTC 60.392 60.000 0.00 0.00 31.89 4.70
2432 3978 0.321671 CTTTTCTGAGGTCGGGCTCA 59.678 55.000 0.00 0.00 0.00 4.26
2433 3979 0.984230 TTTTCTGAGGTCGGGCTCAT 59.016 50.000 0.00 0.00 0.00 2.90
2434 3980 0.537188 TTTCTGAGGTCGGGCTCATC 59.463 55.000 0.00 0.00 0.00 2.92
2435 3981 0.324738 TTCTGAGGTCGGGCTCATCT 60.325 55.000 0.00 0.00 0.00 2.90
2436 3982 1.039785 TCTGAGGTCGGGCTCATCTG 61.040 60.000 0.00 0.00 0.00 2.90
2437 3983 2.107953 GAGGTCGGGCTCATCTGC 59.892 66.667 0.00 0.00 0.00 4.26
2438 3984 2.685017 AGGTCGGGCTCATCTGCA 60.685 61.111 0.00 0.00 34.04 4.41
2439 3985 2.512515 GGTCGGGCTCATCTGCAC 60.513 66.667 0.00 0.00 34.04 4.57
2440 3986 2.512515 GTCGGGCTCATCTGCACC 60.513 66.667 0.00 0.00 31.60 5.01
2441 3987 3.785859 TCGGGCTCATCTGCACCC 61.786 66.667 0.00 0.00 39.12 4.61
2443 3989 4.101448 GGGCTCATCTGCACCCGT 62.101 66.667 0.00 0.00 31.32 5.28
2444 3990 2.821366 GGCTCATCTGCACCCGTG 60.821 66.667 0.00 0.00 34.04 4.94
2445 3991 2.046892 GCTCATCTGCACCCGTGT 60.047 61.111 0.00 0.00 0.00 4.49
2446 3992 1.672356 GCTCATCTGCACCCGTGTT 60.672 57.895 0.00 0.00 0.00 3.32
2447 3993 1.915614 GCTCATCTGCACCCGTGTTG 61.916 60.000 0.00 0.00 0.00 3.33
2448 3994 0.320683 CTCATCTGCACCCGTGTTGA 60.321 55.000 0.00 0.00 0.00 3.18
2449 3995 0.107643 TCATCTGCACCCGTGTTGAA 59.892 50.000 0.00 0.00 0.00 2.69
2450 3996 1.167851 CATCTGCACCCGTGTTGAAT 58.832 50.000 0.00 0.00 0.00 2.57
2451 3997 2.027653 TCATCTGCACCCGTGTTGAATA 60.028 45.455 0.00 0.00 0.00 1.75
2452 3998 2.552599 TCTGCACCCGTGTTGAATAA 57.447 45.000 0.00 0.00 0.00 1.40
2453 3999 2.852449 TCTGCACCCGTGTTGAATAAA 58.148 42.857 0.00 0.00 0.00 1.40
2454 4000 3.215151 TCTGCACCCGTGTTGAATAAAA 58.785 40.909 0.00 0.00 0.00 1.52
2455 4001 3.632604 TCTGCACCCGTGTTGAATAAAAA 59.367 39.130 0.00 0.00 0.00 1.94
2511 4057 9.768215 AATTTCTAAAAGAATTCCCATGGTAGA 57.232 29.630 11.73 4.97 33.67 2.59
2512 4058 8.575649 TTTCTAAAAGAATTCCCATGGTAGAC 57.424 34.615 11.73 0.00 33.67 2.59
2513 4059 7.265599 TCTAAAAGAATTCCCATGGTAGACA 57.734 36.000 11.73 0.00 0.00 3.41
2514 4060 7.695055 TCTAAAAGAATTCCCATGGTAGACAA 58.305 34.615 11.73 0.00 0.00 3.18
2515 4061 8.336235 TCTAAAAGAATTCCCATGGTAGACAAT 58.664 33.333 11.73 0.00 0.00 2.71
2516 4062 7.797121 AAAAGAATTCCCATGGTAGACAATT 57.203 32.000 11.73 6.76 0.00 2.32
2517 4063 7.797121 AAAGAATTCCCATGGTAGACAATTT 57.203 32.000 11.73 0.86 0.00 1.82
2518 4064 6.780457 AGAATTCCCATGGTAGACAATTTG 57.220 37.500 11.73 0.00 0.00 2.32
2519 4065 5.658190 AGAATTCCCATGGTAGACAATTTGG 59.342 40.000 11.73 0.00 0.00 3.28
2520 4066 4.396357 TTCCCATGGTAGACAATTTGGT 57.604 40.909 11.73 0.00 0.00 3.67
2521 4067 3.696045 TCCCATGGTAGACAATTTGGTG 58.304 45.455 11.73 0.00 0.00 4.17
2522 4068 3.332187 TCCCATGGTAGACAATTTGGTGA 59.668 43.478 11.73 0.00 0.00 4.02
2523 4069 3.696051 CCCATGGTAGACAATTTGGTGAG 59.304 47.826 11.73 0.00 0.00 3.51
2524 4070 3.129287 CCATGGTAGACAATTTGGTGAGC 59.871 47.826 2.57 0.00 0.00 4.26
2525 4071 2.422597 TGGTAGACAATTTGGTGAGCG 58.577 47.619 0.78 0.00 0.00 5.03
2526 4072 2.037902 TGGTAGACAATTTGGTGAGCGA 59.962 45.455 0.78 0.00 0.00 4.93
2527 4073 2.673368 GGTAGACAATTTGGTGAGCGAG 59.327 50.000 0.78 0.00 0.00 5.03
2528 4074 2.839486 AGACAATTTGGTGAGCGAGA 57.161 45.000 0.78 0.00 0.00 4.04
2529 4075 3.340814 AGACAATTTGGTGAGCGAGAT 57.659 42.857 0.78 0.00 0.00 2.75
2530 4076 3.265791 AGACAATTTGGTGAGCGAGATC 58.734 45.455 0.78 0.00 0.00 2.75
2531 4077 2.352960 GACAATTTGGTGAGCGAGATCC 59.647 50.000 0.78 0.00 0.00 3.36
2532 4078 1.328680 CAATTTGGTGAGCGAGATCCG 59.671 52.381 0.00 0.00 42.21 4.18
2533 4079 0.824109 ATTTGGTGAGCGAGATCCGA 59.176 50.000 7.64 0.00 41.76 4.55
2534 4080 0.108804 TTTGGTGAGCGAGATCCGAC 60.109 55.000 7.64 2.34 41.76 4.79
2535 4081 1.945354 TTGGTGAGCGAGATCCGACC 61.945 60.000 7.64 6.82 41.76 4.79
2536 4082 2.413765 GTGAGCGAGATCCGACCC 59.586 66.667 7.64 0.00 41.76 4.46
2537 4083 2.044352 TGAGCGAGATCCGACCCA 60.044 61.111 7.64 0.21 41.76 4.51
2538 4084 1.680989 TGAGCGAGATCCGACCCAA 60.681 57.895 7.64 0.00 41.76 4.12
2539 4085 1.043116 TGAGCGAGATCCGACCCAAT 61.043 55.000 7.64 0.00 41.76 3.16
2540 4086 0.105039 GAGCGAGATCCGACCCAATT 59.895 55.000 7.64 0.00 41.76 2.32
2541 4087 0.541863 AGCGAGATCCGACCCAATTT 59.458 50.000 7.64 0.00 41.76 1.82
2542 4088 1.065418 AGCGAGATCCGACCCAATTTT 60.065 47.619 7.64 0.00 41.76 1.82
2543 4089 1.330829 GCGAGATCCGACCCAATTTTC 59.669 52.381 7.64 0.00 41.76 2.29
2544 4090 2.627945 CGAGATCCGACCCAATTTTCA 58.372 47.619 0.00 0.00 41.76 2.69
2545 4091 3.206150 CGAGATCCGACCCAATTTTCAT 58.794 45.455 0.00 0.00 41.76 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 3.114616 GACGAGACGGACCGACGA 61.115 66.667 27.55 0.00 37.61 4.20
72 73 3.660865 TCTAAAAACGAAGTCCTCCTGC 58.339 45.455 0.00 0.00 45.00 4.85
102 103 2.422127 ACACAAACCCAGACAAAACTCG 59.578 45.455 0.00 0.00 0.00 4.18
105 107 2.094234 AGCACACAAACCCAGACAAAAC 60.094 45.455 0.00 0.00 0.00 2.43
114 116 1.656441 CTGAGCAGCACACAAACCC 59.344 57.895 0.00 0.00 0.00 4.11
141 143 0.327924 TTCAGCGATCCACCACCATT 59.672 50.000 0.00 0.00 0.00 3.16
142 144 0.327924 TTTCAGCGATCCACCACCAT 59.672 50.000 0.00 0.00 0.00 3.55
143 145 0.109532 TTTTCAGCGATCCACCACCA 59.890 50.000 0.00 0.00 0.00 4.17
146 148 1.004161 TCCATTTTCAGCGATCCACCA 59.996 47.619 0.00 0.00 0.00 4.17
197 199 3.319405 AGATGATGGTAGACGTGACATCC 59.681 47.826 0.00 0.00 39.08 3.51
202 204 2.427095 CCACAGATGATGGTAGACGTGA 59.573 50.000 0.00 0.00 32.08 4.35
204 206 2.427453 GTCCACAGATGATGGTAGACGT 59.573 50.000 0.00 0.00 38.47 4.34
211 213 1.362768 CACACGTCCACAGATGATGG 58.637 55.000 0.00 0.00 38.71 3.51
219 221 2.061578 ACACCTCCACACGTCCACA 61.062 57.895 0.00 0.00 0.00 4.17
224 226 1.740285 GAGACACACCTCCACACGT 59.260 57.895 0.00 0.00 0.00 4.49
245 247 3.575965 AATCCACAAAAACAGATCCGC 57.424 42.857 0.00 0.00 0.00 5.54
286 288 6.169094 ACCTGAAGACACAAGAACATAGATG 58.831 40.000 0.00 0.00 0.00 2.90
289 291 5.991606 TCAACCTGAAGACACAAGAACATAG 59.008 40.000 0.00 0.00 0.00 2.23
290 292 5.924356 TCAACCTGAAGACACAAGAACATA 58.076 37.500 0.00 0.00 0.00 2.29
293 295 5.106317 TGTTTCAACCTGAAGACACAAGAAC 60.106 40.000 0.00 0.00 37.70 3.01
295 297 4.584874 TGTTTCAACCTGAAGACACAAGA 58.415 39.130 0.00 0.00 37.70 3.02
297 299 5.913137 AATGTTTCAACCTGAAGACACAA 57.087 34.783 6.57 0.00 37.70 3.33
299 301 5.890334 TGAAATGTTTCAACCTGAAGACAC 58.110 37.500 5.75 0.00 43.62 3.67
325 330 3.243569 GCTGCCGATGAAGAGTAGTGTAT 60.244 47.826 0.00 0.00 0.00 2.29
385 390 6.051717 AGTATACAATCAGGAGTTGTCATGC 58.948 40.000 5.50 0.00 40.13 4.06
446 451 4.388499 GTCGCACCACCCCATCGT 62.388 66.667 0.00 0.00 0.00 3.73
447 452 3.605749 AAGTCGCACCACCCCATCG 62.606 63.158 0.00 0.00 0.00 3.84
455 461 2.449031 ATCAAGCCGAAGTCGCACCA 62.449 55.000 0.00 0.00 38.18 4.17
458 464 0.320334 TCAATCAAGCCGAAGTCGCA 60.320 50.000 0.00 0.00 38.18 5.10
531 600 0.931005 GGAGATTTGATGACGTCGCC 59.069 55.000 11.62 5.56 0.00 5.54
532 601 0.572590 CGGAGATTTGATGACGTCGC 59.427 55.000 11.62 6.17 0.00 5.19
533 602 1.909376 ACGGAGATTTGATGACGTCG 58.091 50.000 11.62 0.00 0.00 5.12
534 603 2.222819 GCAACGGAGATTTGATGACGTC 60.223 50.000 9.11 9.11 32.98 4.34
535 604 1.732259 GCAACGGAGATTTGATGACGT 59.268 47.619 0.00 0.00 35.95 4.34
536 605 1.731709 TGCAACGGAGATTTGATGACG 59.268 47.619 0.00 0.00 0.00 4.35
537 606 3.002791 TCTGCAACGGAGATTTGATGAC 58.997 45.455 0.00 0.00 0.00 3.06
538 607 3.002791 GTCTGCAACGGAGATTTGATGA 58.997 45.455 0.00 0.00 0.00 2.92
539 608 2.096496 GGTCTGCAACGGAGATTTGATG 59.904 50.000 0.00 0.00 0.00 3.07
540 609 2.290260 TGGTCTGCAACGGAGATTTGAT 60.290 45.455 0.00 0.00 0.00 2.57
541 610 1.071542 TGGTCTGCAACGGAGATTTGA 59.928 47.619 0.00 0.00 0.00 2.69
542 611 1.522668 TGGTCTGCAACGGAGATTTG 58.477 50.000 0.00 0.00 0.00 2.32
543 612 2.290260 TGATGGTCTGCAACGGAGATTT 60.290 45.455 0.00 0.00 0.00 2.17
544 613 1.278985 TGATGGTCTGCAACGGAGATT 59.721 47.619 0.00 0.00 0.00 2.40
545 614 0.904649 TGATGGTCTGCAACGGAGAT 59.095 50.000 0.00 0.00 0.00 2.75
546 615 0.684535 TTGATGGTCTGCAACGGAGA 59.315 50.000 0.00 0.00 0.00 3.71
547 616 1.081892 CTTGATGGTCTGCAACGGAG 58.918 55.000 0.00 0.00 0.00 4.63
614 2152 6.780457 TGTTACTACCTATGTTACTCCCAC 57.220 41.667 0.00 0.00 0.00 4.61
615 2153 8.505246 TCTATGTTACTACCTATGTTACTCCCA 58.495 37.037 0.00 0.00 0.00 4.37
618 2156 9.843334 GCATCTATGTTACTACCTATGTTACTC 57.157 37.037 0.00 0.00 0.00 2.59
619 2157 8.804204 GGCATCTATGTTACTACCTATGTTACT 58.196 37.037 0.00 0.00 0.00 2.24
621 2159 8.582437 GTGGCATCTATGTTACTACCTATGTTA 58.418 37.037 0.00 0.00 0.00 2.41
622 2160 7.070696 TGTGGCATCTATGTTACTACCTATGTT 59.929 37.037 0.00 0.00 0.00 2.71
623 2161 6.553476 TGTGGCATCTATGTTACTACCTATGT 59.447 38.462 0.00 0.00 0.00 2.29
624 2162 6.993079 TGTGGCATCTATGTTACTACCTATG 58.007 40.000 0.00 0.00 0.00 2.23
627 2165 7.612065 TTATGTGGCATCTATGTTACTACCT 57.388 36.000 0.00 0.00 0.00 3.08
628 2166 6.369065 GCTTATGTGGCATCTATGTTACTACC 59.631 42.308 0.00 0.00 0.00 3.18
629 2167 6.929049 TGCTTATGTGGCATCTATGTTACTAC 59.071 38.462 0.00 0.00 34.56 2.73
631 2169 5.928976 TGCTTATGTGGCATCTATGTTACT 58.071 37.500 0.00 0.00 34.56 2.24
632 2170 6.618287 TTGCTTATGTGGCATCTATGTTAC 57.382 37.500 0.00 0.00 39.54 2.50
634 2172 6.528537 TTTTGCTTATGTGGCATCTATGTT 57.471 33.333 0.00 0.00 39.54 2.71
637 2175 6.098695 ACCAATTTTGCTTATGTGGCATCTAT 59.901 34.615 0.00 0.00 39.54 1.98
638 2176 5.421693 ACCAATTTTGCTTATGTGGCATCTA 59.578 36.000 0.00 0.00 39.54 1.98
639 2177 4.223477 ACCAATTTTGCTTATGTGGCATCT 59.777 37.500 0.00 0.00 39.54 2.90
640 2178 4.330620 CACCAATTTTGCTTATGTGGCATC 59.669 41.667 0.00 0.00 39.54 3.91
641 2179 4.020396 TCACCAATTTTGCTTATGTGGCAT 60.020 37.500 0.00 0.00 39.54 4.40
642 2180 3.323115 TCACCAATTTTGCTTATGTGGCA 59.677 39.130 0.00 0.00 37.97 4.92
643 2181 3.924144 TCACCAATTTTGCTTATGTGGC 58.076 40.909 0.00 0.00 0.00 5.01
644 2182 5.349270 CACATCACCAATTTTGCTTATGTGG 59.651 40.000 15.23 0.00 36.82 4.17
645 2183 5.349270 CCACATCACCAATTTTGCTTATGTG 59.651 40.000 15.68 15.68 38.31 3.21
646 2184 5.481105 CCACATCACCAATTTTGCTTATGT 58.519 37.500 0.00 0.00 0.00 2.29
647 2185 4.330620 GCCACATCACCAATTTTGCTTATG 59.669 41.667 0.00 0.00 0.00 1.90
648 2186 4.020396 TGCCACATCACCAATTTTGCTTAT 60.020 37.500 0.00 0.00 0.00 1.73
649 2187 3.323115 TGCCACATCACCAATTTTGCTTA 59.677 39.130 0.00 0.00 0.00 3.09
650 2188 2.104451 TGCCACATCACCAATTTTGCTT 59.896 40.909 0.00 0.00 0.00 3.91
651 2189 1.693062 TGCCACATCACCAATTTTGCT 59.307 42.857 0.00 0.00 0.00 3.91
652 2190 2.166821 TGCCACATCACCAATTTTGC 57.833 45.000 0.00 0.00 0.00 3.68
653 2191 3.731089 ACTTGCCACATCACCAATTTTG 58.269 40.909 0.00 0.00 0.00 2.44
654 2192 4.588528 ACTACTTGCCACATCACCAATTTT 59.411 37.500 0.00 0.00 0.00 1.82
659 2197 2.949177 AACTACTTGCCACATCACCA 57.051 45.000 0.00 0.00 0.00 4.17
660 2198 4.941263 TCATTAACTACTTGCCACATCACC 59.059 41.667 0.00 0.00 0.00 4.02
661 2199 5.065218 CCTCATTAACTACTTGCCACATCAC 59.935 44.000 0.00 0.00 0.00 3.06
662 2200 5.045942 TCCTCATTAACTACTTGCCACATCA 60.046 40.000 0.00 0.00 0.00 3.07
663 2201 5.428253 TCCTCATTAACTACTTGCCACATC 58.572 41.667 0.00 0.00 0.00 3.06
664 2202 5.189736 TCTCCTCATTAACTACTTGCCACAT 59.810 40.000 0.00 0.00 0.00 3.21
665 2203 4.530553 TCTCCTCATTAACTACTTGCCACA 59.469 41.667 0.00 0.00 0.00 4.17
666 2204 5.086104 TCTCCTCATTAACTACTTGCCAC 57.914 43.478 0.00 0.00 0.00 5.01
667 2205 5.023452 TCTCTCCTCATTAACTACTTGCCA 58.977 41.667 0.00 0.00 0.00 4.92
668 2206 5.452636 CCTCTCTCCTCATTAACTACTTGCC 60.453 48.000 0.00 0.00 0.00 4.52
669 2207 5.596845 CCTCTCTCCTCATTAACTACTTGC 58.403 45.833 0.00 0.00 0.00 4.01
670 2208 5.127845 TGCCTCTCTCCTCATTAACTACTTG 59.872 44.000 0.00 0.00 0.00 3.16
671 2209 5.273208 TGCCTCTCTCCTCATTAACTACTT 58.727 41.667 0.00 0.00 0.00 2.24
672 2210 4.873010 TGCCTCTCTCCTCATTAACTACT 58.127 43.478 0.00 0.00 0.00 2.57
673 2211 5.599999 TTGCCTCTCTCCTCATTAACTAC 57.400 43.478 0.00 0.00 0.00 2.73
674 2212 6.814954 ATTTGCCTCTCTCCTCATTAACTA 57.185 37.500 0.00 0.00 0.00 2.24
675 2213 5.707066 ATTTGCCTCTCTCCTCATTAACT 57.293 39.130 0.00 0.00 0.00 2.24
676 2214 6.821388 TCTATTTGCCTCTCTCCTCATTAAC 58.179 40.000 0.00 0.00 0.00 2.01
677 2215 6.613271 ACTCTATTTGCCTCTCTCCTCATTAA 59.387 38.462 0.00 0.00 0.00 1.40
678 2216 6.139671 ACTCTATTTGCCTCTCTCCTCATTA 58.860 40.000 0.00 0.00 0.00 1.90
679 2217 4.968080 ACTCTATTTGCCTCTCTCCTCATT 59.032 41.667 0.00 0.00 0.00 2.57
680 2218 4.555689 ACTCTATTTGCCTCTCTCCTCAT 58.444 43.478 0.00 0.00 0.00 2.90
681 2219 3.987745 ACTCTATTTGCCTCTCTCCTCA 58.012 45.455 0.00 0.00 0.00 3.86
682 2220 5.361285 TGTTACTCTATTTGCCTCTCTCCTC 59.639 44.000 0.00 0.00 0.00 3.71
683 2221 5.273208 TGTTACTCTATTTGCCTCTCTCCT 58.727 41.667 0.00 0.00 0.00 3.69
684 2222 5.599999 TGTTACTCTATTTGCCTCTCTCC 57.400 43.478 0.00 0.00 0.00 3.71
713 2251 3.311596 GGAAACCGCTATGTGATGGTAAC 59.688 47.826 0.00 0.00 33.45 2.50
714 2252 3.055021 TGGAAACCGCTATGTGATGGTAA 60.055 43.478 0.00 0.00 33.45 2.85
715 2253 2.502130 TGGAAACCGCTATGTGATGGTA 59.498 45.455 0.00 0.00 33.45 3.25
716 2254 1.280710 TGGAAACCGCTATGTGATGGT 59.719 47.619 0.00 0.00 35.90 3.55
717 2255 2.036958 TGGAAACCGCTATGTGATGG 57.963 50.000 0.00 0.00 0.00 3.51
718 2256 3.378112 ACATTGGAAACCGCTATGTGATG 59.622 43.478 0.00 0.00 0.00 3.07
719 2257 3.620488 ACATTGGAAACCGCTATGTGAT 58.380 40.909 0.00 0.00 0.00 3.06
720 2258 3.066291 ACATTGGAAACCGCTATGTGA 57.934 42.857 0.00 0.00 0.00 3.58
721 2259 6.612247 TTATACATTGGAAACCGCTATGTG 57.388 37.500 0.00 0.00 32.23 3.21
722 2260 8.911918 TTATTATACATTGGAAACCGCTATGT 57.088 30.769 0.00 0.00 34.18 2.29
725 2263 9.787435 AGATTTATTATACATTGGAAACCGCTA 57.213 29.630 0.00 0.00 0.00 4.26
726 2264 8.691661 AGATTTATTATACATTGGAAACCGCT 57.308 30.769 0.00 0.00 0.00 5.52
727 2265 9.821662 GTAGATTTATTATACATTGGAAACCGC 57.178 33.333 0.00 0.00 0.00 5.68
778 2316 4.382362 GGGTAGTGTCATAGGTGTGGTAAC 60.382 50.000 0.00 0.00 0.00 2.50
779 2317 3.770933 GGGTAGTGTCATAGGTGTGGTAA 59.229 47.826 0.00 0.00 0.00 2.85
780 2318 3.245694 TGGGTAGTGTCATAGGTGTGGTA 60.246 47.826 0.00 0.00 0.00 3.25
781 2319 2.185387 GGGTAGTGTCATAGGTGTGGT 58.815 52.381 0.00 0.00 0.00 4.16
782 2320 2.093658 GTGGGTAGTGTCATAGGTGTGG 60.094 54.545 0.00 0.00 0.00 4.17
783 2321 2.832129 AGTGGGTAGTGTCATAGGTGTG 59.168 50.000 0.00 0.00 0.00 3.82
784 2322 3.185880 AGTGGGTAGTGTCATAGGTGT 57.814 47.619 0.00 0.00 0.00 4.16
785 2323 4.893524 TCATAGTGGGTAGTGTCATAGGTG 59.106 45.833 0.00 0.00 0.00 4.00
786 2324 5.138758 TCATAGTGGGTAGTGTCATAGGT 57.861 43.478 0.00 0.00 0.00 3.08
787 2325 5.011125 CCTTCATAGTGGGTAGTGTCATAGG 59.989 48.000 0.00 0.00 0.00 2.57
788 2326 5.598830 ACCTTCATAGTGGGTAGTGTCATAG 59.401 44.000 0.00 0.00 0.00 2.23
789 2327 5.525484 ACCTTCATAGTGGGTAGTGTCATA 58.475 41.667 0.00 0.00 0.00 2.15
790 2328 4.362677 ACCTTCATAGTGGGTAGTGTCAT 58.637 43.478 0.00 0.00 0.00 3.06
791 2329 3.786553 ACCTTCATAGTGGGTAGTGTCA 58.213 45.455 0.00 0.00 0.00 3.58
792 2330 5.517322 CTACCTTCATAGTGGGTAGTGTC 57.483 47.826 9.46 0.00 44.30 3.67
797 2335 8.505246 TCTATGTTACTACCTTCATAGTGGGTA 58.495 37.037 0.00 0.00 40.01 3.69
798 2336 7.287235 GTCTATGTTACTACCTTCATAGTGGGT 59.713 40.741 0.00 0.00 40.01 4.51
799 2337 7.506261 AGTCTATGTTACTACCTTCATAGTGGG 59.494 40.741 0.00 0.00 40.01 4.61
800 2338 8.466617 AGTCTATGTTACTACCTTCATAGTGG 57.533 38.462 0.00 0.00 40.01 4.00
838 2376 9.176460 GTGGAGAGTAACTTAGACTAGTAACAT 57.824 37.037 0.00 0.00 0.00 2.71
839 2377 8.381636 AGTGGAGAGTAACTTAGACTAGTAACA 58.618 37.037 0.00 0.00 0.00 2.41
840 2378 8.791327 AGTGGAGAGTAACTTAGACTAGTAAC 57.209 38.462 0.00 0.00 0.00 2.50
843 2381 8.770322 TCATAGTGGAGAGTAACTTAGACTAGT 58.230 37.037 0.00 0.00 0.00 2.57
844 2382 9.048446 GTCATAGTGGAGAGTAACTTAGACTAG 57.952 40.741 0.00 0.00 31.58 2.57
845 2383 7.992033 GGTCATAGTGGAGAGTAACTTAGACTA 59.008 40.741 0.00 0.00 33.27 2.59
846 2384 6.829811 GGTCATAGTGGAGAGTAACTTAGACT 59.170 42.308 0.00 0.00 33.27 3.24
847 2385 6.602406 TGGTCATAGTGGAGAGTAACTTAGAC 59.398 42.308 0.00 0.00 32.58 2.59
848 2386 6.728411 TGGTCATAGTGGAGAGTAACTTAGA 58.272 40.000 0.00 0.00 0.00 2.10
849 2387 6.460399 GCTGGTCATAGTGGAGAGTAACTTAG 60.460 46.154 0.00 0.00 0.00 2.18
850 2388 5.360144 GCTGGTCATAGTGGAGAGTAACTTA 59.640 44.000 0.00 0.00 0.00 2.24
851 2389 4.160626 GCTGGTCATAGTGGAGAGTAACTT 59.839 45.833 0.00 0.00 0.00 2.66
852 2390 3.702045 GCTGGTCATAGTGGAGAGTAACT 59.298 47.826 0.00 0.00 0.00 2.24
853 2391 3.181474 GGCTGGTCATAGTGGAGAGTAAC 60.181 52.174 0.00 0.00 0.00 2.50
854 2392 3.031736 GGCTGGTCATAGTGGAGAGTAA 58.968 50.000 0.00 0.00 0.00 2.24
855 2393 2.245028 AGGCTGGTCATAGTGGAGAGTA 59.755 50.000 0.00 0.00 0.00 2.59
856 2394 1.007721 AGGCTGGTCATAGTGGAGAGT 59.992 52.381 0.00 0.00 0.00 3.24
857 2395 1.786937 AGGCTGGTCATAGTGGAGAG 58.213 55.000 0.00 0.00 0.00 3.20
858 2396 3.398318 TTAGGCTGGTCATAGTGGAGA 57.602 47.619 0.00 0.00 0.00 3.71
859 2397 4.384056 CAATTAGGCTGGTCATAGTGGAG 58.616 47.826 0.00 0.00 0.00 3.86
860 2398 3.136443 CCAATTAGGCTGGTCATAGTGGA 59.864 47.826 0.00 0.00 0.00 4.02
861 2399 3.117888 ACCAATTAGGCTGGTCATAGTGG 60.118 47.826 0.00 0.00 44.05 4.00
862 2400 3.879295 CACCAATTAGGCTGGTCATAGTG 59.121 47.826 0.00 0.00 44.05 2.74
863 2401 3.117888 CCACCAATTAGGCTGGTCATAGT 60.118 47.826 0.00 0.00 44.05 2.12
864 2402 3.480470 CCACCAATTAGGCTGGTCATAG 58.520 50.000 0.00 0.00 44.05 2.23
865 2403 2.174639 CCCACCAATTAGGCTGGTCATA 59.825 50.000 0.00 0.00 44.05 2.15
866 2404 1.063717 CCCACCAATTAGGCTGGTCAT 60.064 52.381 0.00 0.00 44.05 3.06
867 2405 0.331278 CCCACCAATTAGGCTGGTCA 59.669 55.000 0.00 0.00 44.05 4.02
868 2406 0.331616 ACCCACCAATTAGGCTGGTC 59.668 55.000 0.00 0.00 44.05 4.02
870 2408 1.185315 CAACCCACCAATTAGGCTGG 58.815 55.000 0.00 0.00 43.14 4.85
871 2409 1.545582 CACAACCCACCAATTAGGCTG 59.454 52.381 0.00 0.00 43.14 4.85
872 2410 1.427368 TCACAACCCACCAATTAGGCT 59.573 47.619 0.00 0.00 43.14 4.58
873 2411 1.544246 GTCACAACCCACCAATTAGGC 59.456 52.381 0.00 0.00 43.14 3.93
912 2450 2.364324 GACGTAGGATGACATGCCCTAA 59.636 50.000 2.94 0.00 34.64 2.69
914 2452 0.753262 GACGTAGGATGACATGCCCT 59.247 55.000 2.94 2.19 0.00 5.19
915 2453 0.753262 AGACGTAGGATGACATGCCC 59.247 55.000 2.94 0.00 0.00 5.36
916 2454 1.137086 ACAGACGTAGGATGACATGCC 59.863 52.381 2.94 0.00 0.00 4.40
917 2455 2.196749 CACAGACGTAGGATGACATGC 58.803 52.381 0.00 0.00 0.00 4.06
929 2467 4.626081 GGGGCACAGCACAGACGT 62.626 66.667 0.00 0.00 30.93 4.34
1039 2577 2.520741 GAGGAGGAGGGCGGAGAG 60.521 72.222 0.00 0.00 0.00 3.20
1058 2596 4.314440 TGACCTGAGTGGCGCCAC 62.314 66.667 45.27 45.27 46.50 5.01
1168 2706 4.404098 GTGTGCGGTCCGGGGATT 62.404 66.667 14.38 0.00 0.00 3.01
1260 2798 4.530857 CCGAGAAGGCCGCCGATT 62.531 66.667 3.05 0.00 0.00 3.34
1304 2842 1.521010 CAGGATCTGAGGCACTGCG 60.521 63.158 0.00 0.00 41.55 5.18
1408 2946 2.203070 CGCCGATTTCTCCAGGGG 60.203 66.667 0.00 0.00 0.00 4.79
1552 3090 8.430801 TCAACAAAAAGAAAAGAGAGAGAGAG 57.569 34.615 0.00 0.00 0.00 3.20
1553 3091 8.260818 TCTCAACAAAAAGAAAAGAGAGAGAGA 58.739 33.333 0.00 0.00 0.00 3.10
1654 3200 5.122239 TCAGTGGAAAACTATTGAGCAATCG 59.878 40.000 0.00 0.00 36.83 3.34
1655 3201 6.500684 TCAGTGGAAAACTATTGAGCAATC 57.499 37.500 0.00 0.00 36.83 2.67
1715 3261 2.942710 TCTCATTCGTTCAACTCCGAC 58.057 47.619 0.00 0.00 31.95 4.79
1788 3334 7.645402 ACGAGAATAGAACAAACGGAAATTTT 58.355 30.769 0.00 0.00 0.00 1.82
1821 3367 6.037610 GGATGAGAATAAAATGTCTCGTGCTT 59.962 38.462 7.03 0.00 42.73 3.91
1835 3381 5.294306 GCGTGTCATTTGAGGATGAGAATAA 59.706 40.000 0.00 0.00 36.76 1.40
1854 3400 7.792374 ATTTGATGAATTAGTATCTGCGTGT 57.208 32.000 0.00 0.00 0.00 4.49
1900 3446 6.319658 TGGCTGGAAGATGAGACATTTTATTC 59.680 38.462 0.00 0.00 34.07 1.75
1902 3448 5.759059 TGGCTGGAAGATGAGACATTTTAT 58.241 37.500 0.00 0.00 34.07 1.40
1904 3450 4.038271 TGGCTGGAAGATGAGACATTTT 57.962 40.909 0.00 0.00 34.07 1.82
1905 3451 3.726557 TGGCTGGAAGATGAGACATTT 57.273 42.857 0.00 0.00 34.07 2.32
1906 3452 3.726557 TTGGCTGGAAGATGAGACATT 57.273 42.857 0.00 0.00 34.07 2.71
1907 3453 3.201487 TGATTGGCTGGAAGATGAGACAT 59.799 43.478 0.00 0.00 34.07 3.06
1909 3455 3.272574 TGATTGGCTGGAAGATGAGAC 57.727 47.619 0.00 0.00 34.07 3.36
1934 3480 1.878953 ACAGAGTTGTAACGCCCTTG 58.121 50.000 0.00 0.00 35.25 3.61
1986 3532 4.157656 TGTGTAGCAGTGCTCAAACTTTTT 59.842 37.500 23.64 0.00 40.44 1.94
1987 3533 3.694072 TGTGTAGCAGTGCTCAAACTTTT 59.306 39.130 23.64 0.00 40.44 2.27
1988 3534 3.278574 TGTGTAGCAGTGCTCAAACTTT 58.721 40.909 23.64 0.00 40.44 2.66
1989 3535 2.874701 CTGTGTAGCAGTGCTCAAACTT 59.125 45.455 23.64 0.00 40.44 2.66
1990 3536 2.103094 TCTGTGTAGCAGTGCTCAAACT 59.897 45.455 23.64 0.00 45.23 2.66
1991 3537 2.483876 TCTGTGTAGCAGTGCTCAAAC 58.516 47.619 23.64 18.03 45.23 2.93
1992 3538 2.908688 TCTGTGTAGCAGTGCTCAAA 57.091 45.000 23.64 13.38 45.23 2.69
1993 3539 2.299867 TCATCTGTGTAGCAGTGCTCAA 59.700 45.455 23.64 8.38 45.23 3.02
1994 3540 1.895131 TCATCTGTGTAGCAGTGCTCA 59.105 47.619 23.64 16.37 45.23 4.26
1995 3541 2.662006 TCATCTGTGTAGCAGTGCTC 57.338 50.000 23.64 13.85 45.23 4.26
1996 3542 4.262377 GGATATCATCTGTGTAGCAGTGCT 60.262 45.833 23.44 23.44 45.23 4.40
1997 3543 3.993081 GGATATCATCTGTGTAGCAGTGC 59.007 47.826 7.13 7.13 45.23 4.40
1998 3544 5.465532 AGGATATCATCTGTGTAGCAGTG 57.534 43.478 4.83 0.00 45.23 3.66
1999 3545 6.547402 TCTAGGATATCATCTGTGTAGCAGT 58.453 40.000 4.83 0.00 45.23 4.40
2000 3546 6.404623 GCTCTAGGATATCATCTGTGTAGCAG 60.405 46.154 4.83 0.00 46.34 4.24
2001 3547 5.417266 GCTCTAGGATATCATCTGTGTAGCA 59.583 44.000 4.83 0.00 0.00 3.49
2002 3548 5.163561 GGCTCTAGGATATCATCTGTGTAGC 60.164 48.000 4.83 2.48 0.00 3.58
2003 3549 5.065859 CGGCTCTAGGATATCATCTGTGTAG 59.934 48.000 4.83 0.00 0.00 2.74
2004 3550 4.944317 CGGCTCTAGGATATCATCTGTGTA 59.056 45.833 4.83 0.00 0.00 2.90
2005 3551 3.761218 CGGCTCTAGGATATCATCTGTGT 59.239 47.826 4.83 0.00 0.00 3.72
2006 3552 4.013050 TCGGCTCTAGGATATCATCTGTG 58.987 47.826 4.83 0.00 0.00 3.66
2007 3553 4.308526 TCGGCTCTAGGATATCATCTGT 57.691 45.455 4.83 0.00 0.00 3.41
2008 3554 5.850557 AATCGGCTCTAGGATATCATCTG 57.149 43.478 4.83 0.00 0.00 2.90
2009 3555 7.471260 GCATAAATCGGCTCTAGGATATCATCT 60.471 40.741 4.83 0.00 0.00 2.90
2010 3556 6.644592 GCATAAATCGGCTCTAGGATATCATC 59.355 42.308 4.83 0.00 0.00 2.92
2011 3557 6.098838 TGCATAAATCGGCTCTAGGATATCAT 59.901 38.462 4.83 0.00 0.00 2.45
2012 3558 5.422012 TGCATAAATCGGCTCTAGGATATCA 59.578 40.000 4.83 0.00 0.00 2.15
2013 3559 5.751028 GTGCATAAATCGGCTCTAGGATATC 59.249 44.000 0.00 0.00 0.00 1.63
2014 3560 5.665459 GTGCATAAATCGGCTCTAGGATAT 58.335 41.667 0.00 0.00 0.00 1.63
2015 3561 4.380550 CGTGCATAAATCGGCTCTAGGATA 60.381 45.833 0.00 0.00 0.00 2.59
2016 3562 3.615110 CGTGCATAAATCGGCTCTAGGAT 60.615 47.826 0.00 0.00 0.00 3.24
2017 3563 2.288213 CGTGCATAAATCGGCTCTAGGA 60.288 50.000 0.00 0.00 0.00 2.94
2018 3564 2.061773 CGTGCATAAATCGGCTCTAGG 58.938 52.381 0.00 0.00 0.00 3.02
2019 3565 2.726760 GTCGTGCATAAATCGGCTCTAG 59.273 50.000 0.00 0.00 0.00 2.43
2020 3566 2.100087 TGTCGTGCATAAATCGGCTCTA 59.900 45.455 0.00 0.00 0.00 2.43
2021 3567 1.134818 TGTCGTGCATAAATCGGCTCT 60.135 47.619 0.00 0.00 0.00 4.09
2022 3568 1.004927 GTGTCGTGCATAAATCGGCTC 60.005 52.381 0.00 0.00 0.00 4.70
2023 3569 1.006832 GTGTCGTGCATAAATCGGCT 58.993 50.000 0.00 0.00 0.00 5.52
2024 3570 0.315059 CGTGTCGTGCATAAATCGGC 60.315 55.000 0.00 0.00 0.00 5.54
2025 3571 0.996462 ACGTGTCGTGCATAAATCGG 59.004 50.000 0.00 0.00 39.18 4.18
2036 3582 1.516386 GGCATCGATCACGTGTCGT 60.516 57.895 27.40 17.84 42.36 4.34
2037 3583 0.871592 ATGGCATCGATCACGTGTCG 60.872 55.000 24.81 24.81 40.69 4.35
2038 3584 0.855349 GATGGCATCGATCACGTGTC 59.145 55.000 16.51 11.33 40.69 3.67
2039 3585 0.530650 GGATGGCATCGATCACGTGT 60.531 55.000 20.50 2.57 40.69 4.49
2040 3586 0.530431 TGGATGGCATCGATCACGTG 60.530 55.000 20.50 9.94 40.69 4.49
2041 3587 0.394192 ATGGATGGCATCGATCACGT 59.606 50.000 20.50 5.57 40.69 4.49
2042 3588 1.073964 GATGGATGGCATCGATCACG 58.926 55.000 33.92 0.00 42.11 4.35
2043 3589 2.174363 TGATGGATGGCATCGATCAC 57.826 50.000 36.24 21.58 45.53 3.06
2045 3591 2.469274 AGTGATGGATGGCATCGATC 57.531 50.000 32.94 32.94 42.63 3.69
2046 3592 2.882761 CAAAGTGATGGATGGCATCGAT 59.117 45.455 22.72 22.72 32.04 3.59
2047 3593 2.291365 CAAAGTGATGGATGGCATCGA 58.709 47.619 20.50 17.69 32.04 3.59
2048 3594 1.335810 CCAAAGTGATGGATGGCATCG 59.664 52.381 20.50 4.05 43.54 3.84
2053 3599 1.341285 TGGAGCCAAAGTGATGGATGG 60.341 52.381 0.00 0.00 39.71 3.51
2054 3600 2.133281 TGGAGCCAAAGTGATGGATG 57.867 50.000 0.00 0.00 39.71 3.51
2055 3601 2.242965 TCATGGAGCCAAAGTGATGGAT 59.757 45.455 0.00 0.00 43.04 3.41
2056 3602 1.634973 TCATGGAGCCAAAGTGATGGA 59.365 47.619 0.00 0.00 43.54 3.41
2057 3603 2.022195 CTCATGGAGCCAAAGTGATGG 58.978 52.381 0.00 0.00 43.70 3.51
2058 3604 2.719739 ACTCATGGAGCCAAAGTGATG 58.280 47.619 7.01 0.00 32.04 3.07
2059 3605 3.446442 AACTCATGGAGCCAAAGTGAT 57.554 42.857 8.22 0.00 32.04 3.06
2060 3606 2.957402 AACTCATGGAGCCAAAGTGA 57.043 45.000 8.22 1.03 32.04 3.41
2061 3607 3.937706 CTCTAACTCATGGAGCCAAAGTG 59.062 47.826 8.22 0.00 32.04 3.16
2062 3608 4.213564 CTCTAACTCATGGAGCCAAAGT 57.786 45.455 0.00 0.00 32.04 2.66
2069 3615 2.625314 TCGATGGCTCTAACTCATGGAG 59.375 50.000 0.00 0.00 39.53 3.86
2070 3616 2.666317 TCGATGGCTCTAACTCATGGA 58.334 47.619 0.00 0.00 0.00 3.41
2071 3617 3.006217 TGATCGATGGCTCTAACTCATGG 59.994 47.826 0.54 0.00 0.00 3.66
2072 3618 3.986572 GTGATCGATGGCTCTAACTCATG 59.013 47.826 0.54 0.00 0.00 3.07
2073 3619 3.638627 TGTGATCGATGGCTCTAACTCAT 59.361 43.478 0.54 0.00 0.00 2.90
2074 3620 3.023832 TGTGATCGATGGCTCTAACTCA 58.976 45.455 0.54 0.00 0.00 3.41
2075 3621 3.637432 CTGTGATCGATGGCTCTAACTC 58.363 50.000 0.54 0.00 0.00 3.01
2076 3622 2.223923 GCTGTGATCGATGGCTCTAACT 60.224 50.000 0.54 0.00 0.00 2.24
2077 3623 2.131183 GCTGTGATCGATGGCTCTAAC 58.869 52.381 0.54 0.00 0.00 2.34
2078 3624 1.756538 TGCTGTGATCGATGGCTCTAA 59.243 47.619 0.54 0.00 0.00 2.10
2079 3625 1.402787 TGCTGTGATCGATGGCTCTA 58.597 50.000 0.54 0.00 0.00 2.43
2080 3626 0.757512 ATGCTGTGATCGATGGCTCT 59.242 50.000 0.54 0.00 0.00 4.09
2081 3627 1.146637 GATGCTGTGATCGATGGCTC 58.853 55.000 0.54 0.00 0.00 4.70
2082 3628 0.599466 CGATGCTGTGATCGATGGCT 60.599 55.000 0.54 0.00 46.72 4.75
2083 3629 0.877649 ACGATGCTGTGATCGATGGC 60.878 55.000 0.54 2.41 46.72 4.40
2084 3630 1.135046 GACGATGCTGTGATCGATGG 58.865 55.000 0.54 0.00 46.72 3.51
2085 3631 1.135046 GGACGATGCTGTGATCGATG 58.865 55.000 0.54 0.00 46.72 3.84
2086 3632 0.746659 TGGACGATGCTGTGATCGAT 59.253 50.000 10.73 0.00 46.72 3.59
2087 3633 0.746659 ATGGACGATGCTGTGATCGA 59.253 50.000 10.73 0.00 46.72 3.59
2089 3635 4.143242 CGATTTATGGACGATGCTGTGATC 60.143 45.833 0.00 0.00 0.00 2.92
2090 3636 3.742882 CGATTTATGGACGATGCTGTGAT 59.257 43.478 0.00 0.00 0.00 3.06
2091 3637 3.123050 CGATTTATGGACGATGCTGTGA 58.877 45.455 0.00 0.00 0.00 3.58
2092 3638 2.866156 ACGATTTATGGACGATGCTGTG 59.134 45.455 0.00 0.00 0.00 3.66
2093 3639 3.123804 GACGATTTATGGACGATGCTGT 58.876 45.455 0.00 0.00 0.00 4.40
2094 3640 2.476619 GGACGATTTATGGACGATGCTG 59.523 50.000 0.00 0.00 0.00 4.41
2095 3641 2.755650 GGACGATTTATGGACGATGCT 58.244 47.619 0.00 0.00 0.00 3.79
2096 3642 1.455786 CGGACGATTTATGGACGATGC 59.544 52.381 0.00 0.00 0.00 3.91
2097 3643 1.455786 GCGGACGATTTATGGACGATG 59.544 52.381 0.00 0.00 0.00 3.84
2098 3644 1.604693 GGCGGACGATTTATGGACGAT 60.605 52.381 0.00 0.00 0.00 3.73
2099 3645 0.249155 GGCGGACGATTTATGGACGA 60.249 55.000 0.00 0.00 0.00 4.20
2100 3646 0.528901 TGGCGGACGATTTATGGACG 60.529 55.000 0.00 0.00 0.00 4.79
2101 3647 1.597663 CTTGGCGGACGATTTATGGAC 59.402 52.381 0.00 0.00 0.00 4.02
2102 3648 1.474320 CCTTGGCGGACGATTTATGGA 60.474 52.381 0.00 0.00 33.16 3.41
2103 3649 0.944386 CCTTGGCGGACGATTTATGG 59.056 55.000 0.00 0.00 33.16 2.74
2104 3650 1.330521 CACCTTGGCGGACGATTTATG 59.669 52.381 0.00 0.00 36.31 1.90
2105 3651 1.065709 ACACCTTGGCGGACGATTTAT 60.066 47.619 0.00 0.00 36.31 1.40
2106 3652 0.322322 ACACCTTGGCGGACGATTTA 59.678 50.000 0.00 0.00 36.31 1.40
2107 3653 0.953960 GACACCTTGGCGGACGATTT 60.954 55.000 0.00 0.00 36.31 2.17
2108 3654 1.375523 GACACCTTGGCGGACGATT 60.376 57.895 0.00 0.00 36.31 3.34
2109 3655 2.264794 GACACCTTGGCGGACGAT 59.735 61.111 0.00 0.00 36.31 3.73
2116 3662 2.899838 TGCACACGACACCTTGGC 60.900 61.111 0.00 0.00 0.00 4.52
2117 3663 1.775039 CTGTGCACACGACACCTTGG 61.775 60.000 17.42 0.00 37.22 3.61
2118 3664 1.089481 ACTGTGCACACGACACCTTG 61.089 55.000 17.42 5.35 37.22 3.61
2119 3665 0.462375 TACTGTGCACACGACACCTT 59.538 50.000 17.42 0.00 37.22 3.50
2120 3666 0.462375 TTACTGTGCACACGACACCT 59.538 50.000 17.42 0.00 37.22 4.00
2121 3667 1.508632 ATTACTGTGCACACGACACC 58.491 50.000 17.42 0.00 37.22 4.16
2122 3668 3.001070 CGATATTACTGTGCACACGACAC 60.001 47.826 17.42 3.75 38.55 3.67
2123 3669 3.119779 TCGATATTACTGTGCACACGACA 60.120 43.478 17.42 0.10 0.00 4.35
2124 3670 3.431856 TCGATATTACTGTGCACACGAC 58.568 45.455 17.42 2.70 0.00 4.34
2125 3671 3.768468 TCGATATTACTGTGCACACGA 57.232 42.857 17.42 18.25 0.00 4.35
2126 3672 4.833469 TTTCGATATTACTGTGCACACG 57.167 40.909 17.42 16.11 0.00 4.49
2127 3673 6.599437 ACTTTTTCGATATTACTGTGCACAC 58.401 36.000 17.42 3.08 0.00 3.82
2128 3674 6.795098 ACTTTTTCGATATTACTGTGCACA 57.205 33.333 20.37 20.37 0.00 4.57
2129 3675 9.262472 CTAAACTTTTTCGATATTACTGTGCAC 57.738 33.333 10.75 10.75 0.00 4.57
2130 3676 9.210329 TCTAAACTTTTTCGATATTACTGTGCA 57.790 29.630 0.00 0.00 0.00 4.57
2131 3677 9.474249 GTCTAAACTTTTTCGATATTACTGTGC 57.526 33.333 0.00 0.00 0.00 4.57
2185 3731 7.402640 CGCTAGTCTGAAAGGAAACAAATATC 58.597 38.462 0.00 0.00 0.00 1.63
2193 3739 2.831685 TGCGCTAGTCTGAAAGGAAA 57.168 45.000 9.73 0.00 0.00 3.13
2199 3745 1.086696 GCCAAATGCGCTAGTCTGAA 58.913 50.000 9.73 0.00 0.00 3.02
2208 3754 2.317685 AATCGTACGGCCAAATGCGC 62.318 55.000 16.52 0.00 42.61 6.09
2209 3755 0.588730 CAATCGTACGGCCAAATGCG 60.589 55.000 16.52 2.82 42.61 4.73
2220 3766 1.659098 CCACGCCTCTTTCAATCGTAC 59.341 52.381 0.00 0.00 0.00 3.67
2237 3783 0.109919 GTTGAAAATCCGGACGCCAC 60.110 55.000 6.12 0.00 0.00 5.01
2242 3788 0.526211 GCCTGGTTGAAAATCCGGAC 59.474 55.000 6.12 0.00 32.26 4.79
2287 3833 4.444536 CATTGCCGGATCCAATTTGATTT 58.555 39.130 13.41 0.00 30.90 2.17
2288 3834 3.742013 GCATTGCCGGATCCAATTTGATT 60.742 43.478 13.41 0.00 30.90 2.57
2289 3835 2.224113 GCATTGCCGGATCCAATTTGAT 60.224 45.455 13.41 0.00 30.90 2.57
2290 3836 1.136695 GCATTGCCGGATCCAATTTGA 59.863 47.619 13.41 0.00 30.90 2.69
2291 3837 1.134759 TGCATTGCCGGATCCAATTTG 60.135 47.619 13.41 3.56 30.90 2.32
2292 3838 1.134729 GTGCATTGCCGGATCCAATTT 60.135 47.619 13.41 0.00 30.90 1.82
2293 3839 0.461135 GTGCATTGCCGGATCCAATT 59.539 50.000 13.41 0.00 30.90 2.32
2294 3840 0.683828 TGTGCATTGCCGGATCCAAT 60.684 50.000 13.41 2.11 33.41 3.16
2295 3841 0.683828 ATGTGCATTGCCGGATCCAA 60.684 50.000 13.41 0.00 0.00 3.53
2296 3842 1.076850 ATGTGCATTGCCGGATCCA 60.077 52.632 13.41 0.00 0.00 3.41
2297 3843 1.656441 GATGTGCATTGCCGGATCC 59.344 57.895 5.05 0.00 0.00 3.36
2298 3844 1.656441 GGATGTGCATTGCCGGATC 59.344 57.895 5.05 4.83 0.00 3.36
2299 3845 1.829533 GGGATGTGCATTGCCGGAT 60.830 57.895 5.05 0.00 0.00 4.18
2300 3846 2.440065 GGGATGTGCATTGCCGGA 60.440 61.111 5.05 0.00 0.00 5.14
2301 3847 2.079020 GATGGGATGTGCATTGCCGG 62.079 60.000 6.12 0.00 0.00 6.13
2302 3848 1.105167 AGATGGGATGTGCATTGCCG 61.105 55.000 6.12 0.00 0.00 5.69
2303 3849 0.672342 GAGATGGGATGTGCATTGCC 59.328 55.000 6.12 3.57 0.00 4.52
2316 3862 6.185114 AGGGATTGTTTCAGATAGAGATGG 57.815 41.667 0.00 0.00 0.00 3.51
2408 3954 2.880167 GCCCGACCTCAGAAAAGGATTT 60.880 50.000 0.00 0.00 42.41 2.17
2409 3955 1.340114 GCCCGACCTCAGAAAAGGATT 60.340 52.381 0.00 0.00 38.87 3.01
2410 3956 0.253327 GCCCGACCTCAGAAAAGGAT 59.747 55.000 0.00 0.00 38.87 3.24
2411 3957 0.836400 AGCCCGACCTCAGAAAAGGA 60.836 55.000 0.00 0.00 38.87 3.36
2412 3958 0.391793 GAGCCCGACCTCAGAAAAGG 60.392 60.000 0.00 0.00 42.55 3.11
2413 3959 0.321671 TGAGCCCGACCTCAGAAAAG 59.678 55.000 1.51 0.00 36.96 2.27
2414 3960 0.984230 ATGAGCCCGACCTCAGAAAA 59.016 50.000 10.09 0.00 44.37 2.29
2415 3961 0.537188 GATGAGCCCGACCTCAGAAA 59.463 55.000 10.09 0.00 44.37 2.52
2416 3962 0.324738 AGATGAGCCCGACCTCAGAA 60.325 55.000 10.09 0.00 44.37 3.02
2417 3963 1.039785 CAGATGAGCCCGACCTCAGA 61.040 60.000 10.09 0.00 44.37 3.27
2418 3964 1.440893 CAGATGAGCCCGACCTCAG 59.559 63.158 10.09 0.00 44.37 3.35
2419 3965 2.725312 GCAGATGAGCCCGACCTCA 61.725 63.158 7.31 7.31 45.16 3.86
2420 3966 2.107953 GCAGATGAGCCCGACCTC 59.892 66.667 0.00 0.00 0.00 3.85
2421 3967 2.685017 TGCAGATGAGCCCGACCT 60.685 61.111 0.00 0.00 0.00 3.85
2422 3968 2.512515 GTGCAGATGAGCCCGACC 60.513 66.667 0.00 0.00 0.00 4.79
2423 3969 2.512515 GGTGCAGATGAGCCCGAC 60.513 66.667 0.00 0.00 0.00 4.79
2424 3970 3.785859 GGGTGCAGATGAGCCCGA 61.786 66.667 0.00 0.00 0.00 5.14
2426 3972 4.101448 ACGGGTGCAGATGAGCCC 62.101 66.667 0.00 0.00 37.79 5.19
2427 3973 2.821366 CACGGGTGCAGATGAGCC 60.821 66.667 0.00 0.00 0.00 4.70
2428 3974 1.672356 AACACGGGTGCAGATGAGC 60.672 57.895 0.00 0.00 0.00 4.26
2429 3975 0.320683 TCAACACGGGTGCAGATGAG 60.321 55.000 0.00 0.00 0.00 2.90
2430 3976 0.107643 TTCAACACGGGTGCAGATGA 59.892 50.000 0.00 0.00 0.00 2.92
2431 3977 1.167851 ATTCAACACGGGTGCAGATG 58.832 50.000 0.00 0.00 0.00 2.90
2432 3978 2.779755 TATTCAACACGGGTGCAGAT 57.220 45.000 0.00 0.00 0.00 2.90
2433 3979 2.552599 TTATTCAACACGGGTGCAGA 57.447 45.000 0.00 0.00 0.00 4.26
2434 3980 3.634568 TTTTATTCAACACGGGTGCAG 57.365 42.857 0.00 0.00 0.00 4.41
2485 4031 9.768215 TCTACCATGGGAATTCTTTTAGAAATT 57.232 29.630 18.09 0.00 37.82 1.82
2486 4032 9.190317 GTCTACCATGGGAATTCTTTTAGAAAT 57.810 33.333 18.09 0.00 37.82 2.17
2487 4033 8.167392 TGTCTACCATGGGAATTCTTTTAGAAA 58.833 33.333 18.09 2.94 37.82 2.52
2488 4034 7.695055 TGTCTACCATGGGAATTCTTTTAGAA 58.305 34.615 18.09 0.00 38.78 2.10
2489 4035 7.265599 TGTCTACCATGGGAATTCTTTTAGA 57.734 36.000 18.09 7.72 0.00 2.10
2490 4036 7.938140 TTGTCTACCATGGGAATTCTTTTAG 57.062 36.000 18.09 5.32 0.00 1.85
2491 4037 8.893563 AATTGTCTACCATGGGAATTCTTTTA 57.106 30.769 18.09 0.00 0.00 1.52
2492 4038 7.797121 AATTGTCTACCATGGGAATTCTTTT 57.203 32.000 18.09 0.00 0.00 2.27
2493 4039 7.310609 CCAAATTGTCTACCATGGGAATTCTTT 60.311 37.037 18.09 4.75 0.00 2.52
2494 4040 6.155049 CCAAATTGTCTACCATGGGAATTCTT 59.845 38.462 18.09 0.00 0.00 2.52
2495 4041 5.658190 CCAAATTGTCTACCATGGGAATTCT 59.342 40.000 18.09 0.00 0.00 2.40
2496 4042 5.422012 ACCAAATTGTCTACCATGGGAATTC 59.578 40.000 18.09 0.00 32.21 2.17
2497 4043 5.187576 CACCAAATTGTCTACCATGGGAATT 59.812 40.000 18.09 9.04 32.21 2.17
2498 4044 4.711355 CACCAAATTGTCTACCATGGGAAT 59.289 41.667 18.09 3.23 32.21 3.01
2499 4045 4.085733 CACCAAATTGTCTACCATGGGAA 58.914 43.478 18.09 2.41 32.21 3.97
2500 4046 3.332187 TCACCAAATTGTCTACCATGGGA 59.668 43.478 18.09 6.59 32.21 4.37
2501 4047 3.696045 TCACCAAATTGTCTACCATGGG 58.304 45.455 18.09 0.00 32.21 4.00
2502 4048 3.129287 GCTCACCAAATTGTCTACCATGG 59.871 47.826 11.19 11.19 0.00 3.66
2503 4049 3.181507 CGCTCACCAAATTGTCTACCATG 60.182 47.826 0.00 0.00 0.00 3.66
2504 4050 3.009723 CGCTCACCAAATTGTCTACCAT 58.990 45.455 0.00 0.00 0.00 3.55
2505 4051 2.037902 TCGCTCACCAAATTGTCTACCA 59.962 45.455 0.00 0.00 0.00 3.25
2506 4052 2.673368 CTCGCTCACCAAATTGTCTACC 59.327 50.000 0.00 0.00 0.00 3.18
2507 4053 3.585862 TCTCGCTCACCAAATTGTCTAC 58.414 45.455 0.00 0.00 0.00 2.59
2508 4054 3.953712 TCTCGCTCACCAAATTGTCTA 57.046 42.857 0.00 0.00 0.00 2.59
2509 4055 2.839486 TCTCGCTCACCAAATTGTCT 57.161 45.000 0.00 0.00 0.00 3.41
2510 4056 2.352960 GGATCTCGCTCACCAAATTGTC 59.647 50.000 0.00 0.00 0.00 3.18
2511 4057 2.359900 GGATCTCGCTCACCAAATTGT 58.640 47.619 0.00 0.00 0.00 2.71
2512 4058 1.328680 CGGATCTCGCTCACCAAATTG 59.671 52.381 0.00 0.00 0.00 2.32
2513 4059 1.207089 TCGGATCTCGCTCACCAAATT 59.793 47.619 0.00 0.00 39.05 1.82
2514 4060 0.824109 TCGGATCTCGCTCACCAAAT 59.176 50.000 0.00 0.00 39.05 2.32
2515 4061 0.108804 GTCGGATCTCGCTCACCAAA 60.109 55.000 0.00 0.00 39.05 3.28
2516 4062 1.511305 GTCGGATCTCGCTCACCAA 59.489 57.895 0.00 0.00 39.05 3.67
2517 4063 2.415608 GGTCGGATCTCGCTCACCA 61.416 63.158 0.00 0.00 39.05 4.17
2518 4064 2.413765 GGTCGGATCTCGCTCACC 59.586 66.667 0.00 0.00 39.05 4.02
2519 4065 1.945354 TTGGGTCGGATCTCGCTCAC 61.945 60.000 0.00 0.00 39.05 3.51
2520 4066 1.043116 ATTGGGTCGGATCTCGCTCA 61.043 55.000 0.00 0.00 39.05 4.26
2521 4067 0.105039 AATTGGGTCGGATCTCGCTC 59.895 55.000 0.00 0.00 39.05 5.03
2522 4068 0.541863 AAATTGGGTCGGATCTCGCT 59.458 50.000 0.00 0.00 39.05 4.93
2523 4069 1.330829 GAAAATTGGGTCGGATCTCGC 59.669 52.381 0.00 0.00 39.05 5.03
2524 4070 2.627945 TGAAAATTGGGTCGGATCTCG 58.372 47.619 0.00 0.00 40.90 4.04


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.