Multiple sequence alignment - TraesCS3A01G515700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G515700 chr3A 100.000 3334 0 0 1 3334 733726637 733723304 0.000000e+00 6157.0
1 TraesCS3A01G515700 chr3A 82.858 2246 283 49 240 2419 733860694 733858485 0.000000e+00 1921.0
2 TraesCS3A01G515700 chr3A 82.501 1823 272 21 528 2332 733411367 733413160 0.000000e+00 1555.0
3 TraesCS3A01G515700 chr3A 82.528 1780 263 21 568 2330 733039218 733040966 0.000000e+00 1520.0
4 TraesCS3A01G515700 chr3A 82.265 1810 269 29 539 2332 733465297 733467070 0.000000e+00 1517.0
5 TraesCS3A01G515700 chr3A 81.935 1013 118 38 267 1260 733480396 733481362 0.000000e+00 797.0
6 TraesCS3A01G515700 chr3A 94.294 333 13 4 2829 3159 726513488 726513160 3.840000e-139 505.0
7 TraesCS3A01G515700 chr3A 88.832 394 32 6 2269 2652 733655850 733655459 1.080000e-129 473.0
8 TraesCS3A01G515700 chr3A 76.036 338 47 14 255 576 733472143 733472462 9.640000e-31 145.0
9 TraesCS3A01G515700 chr3A 87.778 90 10 1 2726 2815 733620599 733620511 1.640000e-18 104.0
10 TraesCS3A01G515700 chr3A 90.141 71 6 1 2711 2781 733709821 733709752 1.270000e-14 91.6
11 TraesCS3A01G515700 chr3A 94.118 51 3 0 3 53 733041890 733041940 9.920000e-11 78.7
12 TraesCS3A01G515700 chr3B 85.594 2499 292 36 247 2712 811141701 811139238 0.000000e+00 2558.0
13 TraesCS3A01G515700 chr3B 83.854 2081 268 32 262 2332 811154019 811151997 0.000000e+00 1919.0
14 TraesCS3A01G515700 chr3B 84.378 1978 258 32 443 2391 811079199 811081154 0.000000e+00 1893.0
15 TraesCS3A01G515700 chr3B 82.838 1818 276 15 528 2332 810970261 810972055 0.000000e+00 1596.0
16 TraesCS3A01G515700 chr3B 82.658 1776 267 20 568 2332 810948009 810949754 0.000000e+00 1535.0
17 TraesCS3A01G515700 chr3B 75.575 348 50 17 244 587 811142594 811142278 4.490000e-29 139.0
18 TraesCS3A01G515700 chr3B 87.963 108 12 1 2605 2712 811151661 811151555 3.490000e-25 126.0
19 TraesCS3A01G515700 chr3B 86.207 87 11 1 2626 2712 811126750 811126665 3.540000e-15 93.5
20 TraesCS3A01G515700 chr3B 81.731 104 14 3 85 188 811141797 811141699 7.670000e-12 82.4
21 TraesCS3A01G515700 chr3D 84.099 2635 285 63 247 2840 604144174 604141633 0.000000e+00 2422.0
22 TraesCS3A01G515700 chr3D 85.401 2370 274 38 315 2646 604253253 604250918 0.000000e+00 2394.0
23 TraesCS3A01G515700 chr3D 83.874 2158 269 36 261 2398 604259622 604257524 0.000000e+00 1984.0
24 TraesCS3A01G515700 chr3D 83.776 2108 262 51 267 2344 603962356 603964413 0.000000e+00 1925.0
25 TraesCS3A01G515700 chr3D 83.671 1825 251 23 637 2441 604137581 604135784 0.000000e+00 1676.0
26 TraesCS3A01G515700 chr3D 82.819 1816 257 28 534 2332 603943475 603945252 0.000000e+00 1574.0
27 TraesCS3A01G515700 chr3D 82.511 1784 262 24 568 2332 602803981 602802229 0.000000e+00 1520.0
28 TraesCS3A01G515700 chr3D 83.333 144 22 2 2569 2712 604257311 604257170 7.510000e-27 132.0
29 TraesCS3A01G515700 chr3D 77.727 220 19 19 2626 2815 604135725 604135506 1.260000e-19 108.0
30 TraesCS3A01G515700 chr3D 93.750 48 3 0 6 53 602801326 602801279 4.610000e-09 73.1
31 TraesCS3A01G515700 chr1B 87.370 578 41 13 2293 2841 491066747 491067321 4.690000e-178 634.0
32 TraesCS3A01G515700 chr5D 97.106 311 8 1 2841 3150 482608799 482609109 1.060000e-144 523.0
33 TraesCS3A01G515700 chr7A 93.438 320 21 0 2840 3159 109311498 109311179 3.010000e-130 475.0
34 TraesCS3A01G515700 chr7A 98.148 54 1 0 181 234 61821601 61821548 9.850000e-16 95.3
35 TraesCS3A01G515700 chr7A 93.333 60 3 1 185 243 677890200 677890141 1.650000e-13 87.9
36 TraesCS3A01G515700 chr4B 95.604 273 12 0 2877 3149 341925678 341925406 3.950000e-119 438.0
37 TraesCS3A01G515700 chr6B 90.939 309 16 1 2841 3149 623520467 623520171 4.010000e-109 405.0
38 TraesCS3A01G515700 chr1A 88.720 328 21 1 2829 3156 280273006 280273317 1.450000e-103 387.0
39 TraesCS3A01G515700 chr7B 82.410 307 25 10 2382 2661 354092861 354092557 1.200000e-59 241.0
40 TraesCS3A01G515700 chr5B 82.085 307 26 10 2382 2661 439555660 439555356 5.560000e-58 235.0
41 TraesCS3A01G515700 chr2B 82.026 306 26 9 2382 2660 23957500 23957197 2.000000e-57 233.0
42 TraesCS3A01G515700 chr2B 89.189 74 6 2 167 239 682941949 682941877 1.270000e-14 91.6
43 TraesCS3A01G515700 chr1D 98.214 56 1 0 184 239 458432650 458432595 7.610000e-17 99.0
44 TraesCS3A01G515700 chr2D 98.182 55 1 0 185 239 599945173 599945227 2.740000e-16 97.1
45 TraesCS3A01G515700 chr2D 87.342 79 8 2 2839 2917 318687363 318687287 4.580000e-14 89.8
46 TraesCS3A01G515700 chr2A 100.000 51 0 0 182 232 148854947 148854997 9.850000e-16 95.3
47 TraesCS3A01G515700 chr2A 96.364 55 2 0 185 239 346210347 346210401 1.270000e-14 91.6
48 TraesCS3A01G515700 chr2A 94.643 56 3 0 184 239 547411498 547411553 1.650000e-13 87.9
49 TraesCS3A01G515700 chr5A 98.113 53 1 0 185 237 274971358 274971306 3.540000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G515700 chr3A 733723304 733726637 3333 True 6157.000000 6157 100.000000 1 3334 1 chr3A.!!$R5 3333
1 TraesCS3A01G515700 chr3A 733858485 733860694 2209 True 1921.000000 1921 82.858000 240 2419 1 chr3A.!!$R6 2179
2 TraesCS3A01G515700 chr3A 733411367 733413160 1793 False 1555.000000 1555 82.501000 528 2332 1 chr3A.!!$F1 1804
3 TraesCS3A01G515700 chr3A 733465297 733467070 1773 False 1517.000000 1517 82.265000 539 2332 1 chr3A.!!$F2 1793
4 TraesCS3A01G515700 chr3A 733039218 733041940 2722 False 799.350000 1520 88.323000 3 2330 2 chr3A.!!$F5 2327
5 TraesCS3A01G515700 chr3A 733480396 733481362 966 False 797.000000 797 81.935000 267 1260 1 chr3A.!!$F4 993
6 TraesCS3A01G515700 chr3B 811079199 811081154 1955 False 1893.000000 1893 84.378000 443 2391 1 chr3B.!!$F3 1948
7 TraesCS3A01G515700 chr3B 810970261 810972055 1794 False 1596.000000 1596 82.838000 528 2332 1 chr3B.!!$F2 1804
8 TraesCS3A01G515700 chr3B 810948009 810949754 1745 False 1535.000000 1535 82.658000 568 2332 1 chr3B.!!$F1 1764
9 TraesCS3A01G515700 chr3B 811151555 811154019 2464 True 1022.500000 1919 85.908500 262 2712 2 chr3B.!!$R3 2450
10 TraesCS3A01G515700 chr3B 811139238 811142594 3356 True 926.466667 2558 80.966667 85 2712 3 chr3B.!!$R2 2627
11 TraesCS3A01G515700 chr3D 604141633 604144174 2541 True 2422.000000 2422 84.099000 247 2840 1 chr3D.!!$R1 2593
12 TraesCS3A01G515700 chr3D 603962356 603964413 2057 False 1925.000000 1925 83.776000 267 2344 1 chr3D.!!$F2 2077
13 TraesCS3A01G515700 chr3D 603943475 603945252 1777 False 1574.000000 1574 82.819000 534 2332 1 chr3D.!!$F1 1798
14 TraesCS3A01G515700 chr3D 604250918 604259622 8704 True 1503.333333 2394 84.202667 261 2712 3 chr3D.!!$R4 2451
15 TraesCS3A01G515700 chr3D 604135506 604137581 2075 True 892.000000 1676 80.699000 637 2815 2 chr3D.!!$R3 2178
16 TraesCS3A01G515700 chr3D 602801279 602803981 2702 True 796.550000 1520 88.130500 6 2332 2 chr3D.!!$R2 2326
17 TraesCS3A01G515700 chr1B 491066747 491067321 574 False 634.000000 634 87.370000 2293 2841 1 chr1B.!!$F1 548

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
201 202 0.038744 AGTACTCCCTCCGTCCGAAA 59.961 55.0 0.0 0.0 0.00 3.46 F
204 205 0.320697 ACTCCCTCCGTCCGAAAAAG 59.679 55.0 0.0 0.0 0.00 2.27 F
205 206 0.320697 CTCCCTCCGTCCGAAAAAGT 59.679 55.0 0.0 0.0 0.00 2.66 F
672 7935 0.533491 ACCAACGCAATAGCCGAGTA 59.467 50.0 0.0 0.0 37.52 2.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1893 9223 0.318441 TGAAGACTTGCCTCTGGTCG 59.682 55.000 0.00 0.00 35.42 4.79 R
1967 9297 1.331756 GATTTACTGGAGGCATGCGTG 59.668 52.381 19.15 6.13 0.00 5.34 R
2183 9541 2.837498 AGCTTTGCCACAAAATTGACC 58.163 42.857 0.00 0.00 0.00 4.02 R
2339 9742 1.093159 GCAAAGTGATGAGGGAGCAG 58.907 55.000 0.00 0.00 0.00 4.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.282247 GTTGTTCATATGCTTGTTTAGATTCAG 57.718 33.333 0.00 0.00 0.00 3.02
27 28 8.565896 TGTTCATATGCTTGTTTAGATTCAGT 57.434 30.769 0.00 0.00 0.00 3.41
28 29 9.013229 TGTTCATATGCTTGTTTAGATTCAGTT 57.987 29.630 0.00 0.00 0.00 3.16
29 30 9.282247 GTTCATATGCTTGTTTAGATTCAGTTG 57.718 33.333 0.00 0.00 0.00 3.16
30 31 7.475015 TCATATGCTTGTTTAGATTCAGTTGC 58.525 34.615 0.00 0.00 0.00 4.17
31 32 5.972107 ATGCTTGTTTAGATTCAGTTGCT 57.028 34.783 0.00 0.00 0.00 3.91
32 33 5.772825 TGCTTGTTTAGATTCAGTTGCTT 57.227 34.783 0.00 0.00 0.00 3.91
33 34 6.875948 TGCTTGTTTAGATTCAGTTGCTTA 57.124 33.333 0.00 0.00 0.00 3.09
34 35 7.270757 TGCTTGTTTAGATTCAGTTGCTTAA 57.729 32.000 0.00 0.00 0.00 1.85
35 36 7.138736 TGCTTGTTTAGATTCAGTTGCTTAAC 58.861 34.615 0.00 0.00 0.00 2.01
36 37 7.013274 TGCTTGTTTAGATTCAGTTGCTTAACT 59.987 33.333 0.00 0.00 0.00 2.24
49 50 7.440523 AGTTGCTTAACTGAATCCACTTTAG 57.559 36.000 0.00 0.00 0.00 1.85
50 51 6.998673 AGTTGCTTAACTGAATCCACTTTAGT 59.001 34.615 0.00 0.00 35.34 2.24
51 52 8.154856 AGTTGCTTAACTGAATCCACTTTAGTA 58.845 33.333 0.00 0.00 32.86 1.82
52 53 7.900782 TGCTTAACTGAATCCACTTTAGTAC 57.099 36.000 0.00 0.00 32.86 2.73
53 54 6.877322 TGCTTAACTGAATCCACTTTAGTACC 59.123 38.462 0.00 0.00 32.86 3.34
54 55 6.315642 GCTTAACTGAATCCACTTTAGTACCC 59.684 42.308 0.00 0.00 32.86 3.69
55 56 7.563724 TTAACTGAATCCACTTTAGTACCCT 57.436 36.000 0.00 0.00 32.86 4.34
56 57 5.422214 ACTGAATCCACTTTAGTACCCTG 57.578 43.478 0.00 0.00 32.30 4.45
57 58 4.844655 ACTGAATCCACTTTAGTACCCTGT 59.155 41.667 0.00 0.00 32.30 4.00
58 59 5.309806 ACTGAATCCACTTTAGTACCCTGTT 59.690 40.000 0.00 0.00 32.30 3.16
59 60 6.499350 ACTGAATCCACTTTAGTACCCTGTTA 59.501 38.462 0.00 0.00 32.30 2.41
60 61 7.182206 ACTGAATCCACTTTAGTACCCTGTTAT 59.818 37.037 0.00 0.00 32.30 1.89
61 62 7.924541 TGAATCCACTTTAGTACCCTGTTATT 58.075 34.615 0.00 0.00 0.00 1.40
62 63 8.387813 TGAATCCACTTTAGTACCCTGTTATTT 58.612 33.333 0.00 0.00 0.00 1.40
63 64 9.895138 GAATCCACTTTAGTACCCTGTTATTTA 57.105 33.333 0.00 0.00 0.00 1.40
64 65 9.676861 AATCCACTTTAGTACCCTGTTATTTAC 57.323 33.333 0.00 0.00 0.00 2.01
65 66 7.322664 TCCACTTTAGTACCCTGTTATTTACG 58.677 38.462 0.00 0.00 0.00 3.18
66 67 7.039082 TCCACTTTAGTACCCTGTTATTTACGT 60.039 37.037 0.00 0.00 0.00 3.57
67 68 7.603784 CCACTTTAGTACCCTGTTATTTACGTT 59.396 37.037 0.00 0.00 0.00 3.99
68 69 8.437742 CACTTTAGTACCCTGTTATTTACGTTG 58.562 37.037 0.00 0.00 0.00 4.10
69 70 6.966435 TTAGTACCCTGTTATTTACGTTGC 57.034 37.500 0.00 0.00 0.00 4.17
70 71 5.156608 AGTACCCTGTTATTTACGTTGCT 57.843 39.130 0.00 0.00 0.00 3.91
71 72 5.554070 AGTACCCTGTTATTTACGTTGCTT 58.446 37.500 0.00 0.00 0.00 3.91
72 73 5.999600 AGTACCCTGTTATTTACGTTGCTTT 59.000 36.000 0.00 0.00 0.00 3.51
73 74 5.777850 ACCCTGTTATTTACGTTGCTTTT 57.222 34.783 0.00 0.00 0.00 2.27
74 75 5.525199 ACCCTGTTATTTACGTTGCTTTTG 58.475 37.500 0.00 0.00 0.00 2.44
75 76 5.068067 ACCCTGTTATTTACGTTGCTTTTGT 59.932 36.000 0.00 0.00 0.00 2.83
76 77 5.980715 CCCTGTTATTTACGTTGCTTTTGTT 59.019 36.000 0.00 0.00 0.00 2.83
77 78 6.074569 CCCTGTTATTTACGTTGCTTTTGTTG 60.075 38.462 0.00 0.00 0.00 3.33
78 79 6.474102 CCTGTTATTTACGTTGCTTTTGTTGT 59.526 34.615 0.00 0.00 0.00 3.32
79 80 7.009723 CCTGTTATTTACGTTGCTTTTGTTGTT 59.990 33.333 0.00 0.00 0.00 2.83
80 81 7.886696 TGTTATTTACGTTGCTTTTGTTGTTC 58.113 30.769 0.00 0.00 0.00 3.18
81 82 7.755822 TGTTATTTACGTTGCTTTTGTTGTTCT 59.244 29.630 0.00 0.00 0.00 3.01
82 83 6.806120 ATTTACGTTGCTTTTGTTGTTCTC 57.194 33.333 0.00 0.00 0.00 2.87
83 84 5.554822 TTACGTTGCTTTTGTTGTTCTCT 57.445 34.783 0.00 0.00 0.00 3.10
84 85 6.665474 TTACGTTGCTTTTGTTGTTCTCTA 57.335 33.333 0.00 0.00 0.00 2.43
85 86 5.156804 ACGTTGCTTTTGTTGTTCTCTAG 57.843 39.130 0.00 0.00 0.00 2.43
86 87 3.968724 CGTTGCTTTTGTTGTTCTCTAGC 59.031 43.478 0.00 0.00 0.00 3.42
87 88 4.260784 CGTTGCTTTTGTTGTTCTCTAGCT 60.261 41.667 0.00 0.00 0.00 3.32
88 89 5.208503 GTTGCTTTTGTTGTTCTCTAGCTC 58.791 41.667 0.00 0.00 0.00 4.09
89 90 4.708177 TGCTTTTGTTGTTCTCTAGCTCT 58.292 39.130 0.00 0.00 0.00 4.09
90 91 4.512944 TGCTTTTGTTGTTCTCTAGCTCTG 59.487 41.667 0.00 0.00 0.00 3.35
91 92 4.612486 GCTTTTGTTGTTCTCTAGCTCTGC 60.612 45.833 0.00 0.00 0.00 4.26
92 93 3.751479 TTGTTGTTCTCTAGCTCTGCA 57.249 42.857 0.00 0.00 0.00 4.41
93 94 3.309961 TGTTGTTCTCTAGCTCTGCAG 57.690 47.619 7.63 7.63 0.00 4.41
94 95 2.630098 TGTTGTTCTCTAGCTCTGCAGT 59.370 45.455 14.67 0.00 0.00 4.40
95 96 2.992543 GTTGTTCTCTAGCTCTGCAGTG 59.007 50.000 14.67 12.95 0.00 3.66
96 97 1.067283 TGTTCTCTAGCTCTGCAGTGC 60.067 52.381 28.82 28.82 35.00 4.40
97 98 1.204467 GTTCTCTAGCTCTGCAGTGCT 59.796 52.381 36.91 36.91 45.49 4.40
98 99 2.425312 GTTCTCTAGCTCTGCAGTGCTA 59.575 50.000 35.56 35.56 43.60 3.49
99 100 2.728007 TCTCTAGCTCTGCAGTGCTAA 58.272 47.619 36.46 27.99 43.68 3.09
100 101 3.295093 TCTCTAGCTCTGCAGTGCTAAT 58.705 45.455 36.46 22.96 43.68 1.73
101 102 3.703556 TCTCTAGCTCTGCAGTGCTAATT 59.296 43.478 36.46 22.67 43.68 1.40
102 103 4.161189 TCTCTAGCTCTGCAGTGCTAATTT 59.839 41.667 36.46 22.37 43.68 1.82
103 104 4.437239 TCTAGCTCTGCAGTGCTAATTTC 58.563 43.478 36.46 13.54 43.68 2.17
104 105 3.347077 AGCTCTGCAGTGCTAATTTCT 57.653 42.857 35.20 14.82 42.32 2.52
105 106 3.008330 AGCTCTGCAGTGCTAATTTCTG 58.992 45.455 35.20 0.00 42.32 3.02
106 107 3.005554 GCTCTGCAGTGCTAATTTCTGA 58.994 45.455 28.75 0.00 0.00 3.27
107 108 3.063725 GCTCTGCAGTGCTAATTTCTGAG 59.936 47.826 28.75 9.57 0.00 3.35
108 109 4.502016 CTCTGCAGTGCTAATTTCTGAGA 58.498 43.478 17.60 6.26 0.00 3.27
109 110 4.898320 TCTGCAGTGCTAATTTCTGAGAA 58.102 39.130 17.60 0.00 0.00 2.87
110 111 5.494724 TCTGCAGTGCTAATTTCTGAGAAT 58.505 37.500 17.60 0.00 0.00 2.40
111 112 5.942236 TCTGCAGTGCTAATTTCTGAGAATT 59.058 36.000 17.60 0.00 33.95 2.17
112 113 7.105588 TCTGCAGTGCTAATTTCTGAGAATTA 58.894 34.615 17.60 0.00 31.96 1.40
113 114 7.772292 TCTGCAGTGCTAATTTCTGAGAATTAT 59.228 33.333 17.60 0.00 32.66 1.28
114 115 8.284945 TGCAGTGCTAATTTCTGAGAATTATT 57.715 30.769 17.60 0.00 32.66 1.40
115 116 9.394767 TGCAGTGCTAATTTCTGAGAATTATTA 57.605 29.630 17.60 0.00 32.66 0.98
127 128 9.832445 TTCTGAGAATTATTATTTTCCTAGCGT 57.168 29.630 0.00 0.00 0.00 5.07
138 139 6.635030 ATTTTCCTAGCGTATTTCATTCCC 57.365 37.500 0.00 0.00 0.00 3.97
139 140 5.367945 TTTCCTAGCGTATTTCATTCCCT 57.632 39.130 0.00 0.00 0.00 4.20
140 141 6.488769 TTTCCTAGCGTATTTCATTCCCTA 57.511 37.500 0.00 0.00 0.00 3.53
141 142 6.488769 TTCCTAGCGTATTTCATTCCCTAA 57.511 37.500 0.00 0.00 0.00 2.69
142 143 6.097915 TCCTAGCGTATTTCATTCCCTAAG 57.902 41.667 0.00 0.00 0.00 2.18
143 144 5.836898 TCCTAGCGTATTTCATTCCCTAAGA 59.163 40.000 0.00 0.00 0.00 2.10
144 145 6.325545 TCCTAGCGTATTTCATTCCCTAAGAA 59.674 38.462 0.00 0.00 39.32 2.52
145 146 6.990349 CCTAGCGTATTTCATTCCCTAAGAAA 59.010 38.462 0.00 0.00 38.21 2.52
146 147 6.679327 AGCGTATTTCATTCCCTAAGAAAC 57.321 37.500 0.00 0.00 38.21 2.78
147 148 6.415573 AGCGTATTTCATTCCCTAAGAAACT 58.584 36.000 0.00 0.00 38.21 2.66
148 149 7.562135 AGCGTATTTCATTCCCTAAGAAACTA 58.438 34.615 0.00 0.00 38.21 2.24
149 150 8.044908 AGCGTATTTCATTCCCTAAGAAACTAA 58.955 33.333 0.00 0.00 38.21 2.24
150 151 8.336080 GCGTATTTCATTCCCTAAGAAACTAAG 58.664 37.037 0.00 0.00 38.21 2.18
151 152 9.595823 CGTATTTCATTCCCTAAGAAACTAAGA 57.404 33.333 0.00 0.00 38.21 2.10
174 175 9.750125 AAGAAAGATTTAATTGTCAGTTGGAAC 57.250 29.630 0.00 0.00 0.00 3.62
175 176 8.360390 AGAAAGATTTAATTGTCAGTTGGAACC 58.640 33.333 0.00 0.00 0.00 3.62
176 177 7.839680 AAGATTTAATTGTCAGTTGGAACCT 57.160 32.000 0.00 0.00 0.00 3.50
177 178 8.934023 AAGATTTAATTGTCAGTTGGAACCTA 57.066 30.769 0.00 0.00 0.00 3.08
178 179 8.336801 AGATTTAATTGTCAGTTGGAACCTAC 57.663 34.615 0.00 0.00 0.00 3.18
179 180 8.164070 AGATTTAATTGTCAGTTGGAACCTACT 58.836 33.333 2.41 2.41 32.63 2.57
180 181 7.739498 TTTAATTGTCAGTTGGAACCTACTC 57.261 36.000 5.09 0.00 30.18 2.59
181 182 5.568620 AATTGTCAGTTGGAACCTACTCT 57.431 39.130 5.09 0.00 30.18 3.24
182 183 6.681729 AATTGTCAGTTGGAACCTACTCTA 57.318 37.500 5.09 0.00 30.18 2.43
183 184 5.723672 TTGTCAGTTGGAACCTACTCTAG 57.276 43.478 5.09 0.00 30.18 2.43
184 185 4.737578 TGTCAGTTGGAACCTACTCTAGT 58.262 43.478 5.09 0.00 30.18 2.57
185 186 5.884322 TGTCAGTTGGAACCTACTCTAGTA 58.116 41.667 5.09 0.00 30.18 1.82
186 187 5.709164 TGTCAGTTGGAACCTACTCTAGTAC 59.291 44.000 5.09 0.00 30.18 2.73
187 188 5.945191 GTCAGTTGGAACCTACTCTAGTACT 59.055 44.000 0.00 0.00 30.18 2.73
188 189 6.093909 GTCAGTTGGAACCTACTCTAGTACTC 59.906 46.154 0.00 0.00 30.18 2.59
189 190 5.357596 CAGTTGGAACCTACTCTAGTACTCC 59.642 48.000 0.00 0.00 30.18 3.85
190 191 4.516652 TGGAACCTACTCTAGTACTCCC 57.483 50.000 0.00 0.00 0.00 4.30
191 192 4.117632 TGGAACCTACTCTAGTACTCCCT 58.882 47.826 0.00 0.00 0.00 4.20
192 193 4.165758 TGGAACCTACTCTAGTACTCCCTC 59.834 50.000 0.00 0.00 0.00 4.30
193 194 4.446167 GGAACCTACTCTAGTACTCCCTCC 60.446 54.167 0.00 0.00 0.00 4.30
194 195 2.705127 ACCTACTCTAGTACTCCCTCCG 59.295 54.545 0.00 0.00 0.00 4.63
195 196 2.705127 CCTACTCTAGTACTCCCTCCGT 59.295 54.545 0.00 0.00 0.00 4.69
196 197 3.244181 CCTACTCTAGTACTCCCTCCGTC 60.244 56.522 0.00 0.00 0.00 4.79
197 198 1.490069 ACTCTAGTACTCCCTCCGTCC 59.510 57.143 0.00 0.00 0.00 4.79
198 199 0.467384 TCTAGTACTCCCTCCGTCCG 59.533 60.000 0.00 0.00 0.00 4.79
199 200 0.467384 CTAGTACTCCCTCCGTCCGA 59.533 60.000 0.00 0.00 0.00 4.55
200 201 0.911769 TAGTACTCCCTCCGTCCGAA 59.088 55.000 0.00 0.00 0.00 4.30
201 202 0.038744 AGTACTCCCTCCGTCCGAAA 59.961 55.000 0.00 0.00 0.00 3.46
202 203 0.890683 GTACTCCCTCCGTCCGAAAA 59.109 55.000 0.00 0.00 0.00 2.29
203 204 1.273327 GTACTCCCTCCGTCCGAAAAA 59.727 52.381 0.00 0.00 0.00 1.94
204 205 0.320697 ACTCCCTCCGTCCGAAAAAG 59.679 55.000 0.00 0.00 0.00 2.27
205 206 0.320697 CTCCCTCCGTCCGAAAAAGT 59.679 55.000 0.00 0.00 0.00 2.66
206 207 0.760572 TCCCTCCGTCCGAAAAAGTT 59.239 50.000 0.00 0.00 0.00 2.66
207 208 1.141455 TCCCTCCGTCCGAAAAAGTTT 59.859 47.619 0.00 0.00 0.00 2.66
208 209 1.265905 CCCTCCGTCCGAAAAAGTTTG 59.734 52.381 0.00 0.00 0.00 2.93
209 210 1.944709 CCTCCGTCCGAAAAAGTTTGT 59.055 47.619 0.00 0.00 0.00 2.83
210 211 2.032290 CCTCCGTCCGAAAAAGTTTGTC 60.032 50.000 0.00 0.00 0.00 3.18
211 212 1.941975 TCCGTCCGAAAAAGTTTGTCC 59.058 47.619 0.00 0.00 0.00 4.02
212 213 1.002142 CCGTCCGAAAAAGTTTGTCCC 60.002 52.381 0.00 0.00 0.00 4.46
213 214 1.944709 CGTCCGAAAAAGTTTGTCCCT 59.055 47.619 0.00 0.00 0.00 4.20
214 215 2.356695 CGTCCGAAAAAGTTTGTCCCTT 59.643 45.455 0.00 0.00 0.00 3.95
215 216 3.560896 CGTCCGAAAAAGTTTGTCCCTTA 59.439 43.478 0.00 0.00 0.00 2.69
216 217 4.035441 CGTCCGAAAAAGTTTGTCCCTTAA 59.965 41.667 0.00 0.00 0.00 1.85
217 218 5.448904 CGTCCGAAAAAGTTTGTCCCTTAAA 60.449 40.000 0.00 0.00 0.00 1.52
218 219 6.509656 GTCCGAAAAAGTTTGTCCCTTAAAT 58.490 36.000 0.00 0.00 0.00 1.40
219 220 6.419710 GTCCGAAAAAGTTTGTCCCTTAAATG 59.580 38.462 0.00 0.00 0.00 2.32
220 221 5.694458 CCGAAAAAGTTTGTCCCTTAAATGG 59.306 40.000 0.00 0.00 0.00 3.16
221 222 6.461788 CCGAAAAAGTTTGTCCCTTAAATGGA 60.462 38.462 0.00 0.00 0.00 3.41
222 223 7.151976 CGAAAAAGTTTGTCCCTTAAATGGAT 58.848 34.615 0.00 0.00 33.65 3.41
223 224 7.116233 CGAAAAAGTTTGTCCCTTAAATGGATG 59.884 37.037 0.00 0.00 33.65 3.51
224 225 6.994421 AAAGTTTGTCCCTTAAATGGATGT 57.006 33.333 0.00 0.00 33.65 3.06
225 226 8.485578 AAAAGTTTGTCCCTTAAATGGATGTA 57.514 30.769 0.00 0.00 33.65 2.29
226 227 8.664669 AAAGTTTGTCCCTTAAATGGATGTAT 57.335 30.769 0.00 0.00 33.65 2.29
227 228 7.881775 AGTTTGTCCCTTAAATGGATGTATC 57.118 36.000 0.00 0.00 33.65 2.24
228 229 7.643123 AGTTTGTCCCTTAAATGGATGTATCT 58.357 34.615 0.00 0.00 33.65 1.98
229 230 8.778059 AGTTTGTCCCTTAAATGGATGTATCTA 58.222 33.333 0.00 0.00 33.65 1.98
230 231 9.057089 GTTTGTCCCTTAAATGGATGTATCTAG 57.943 37.037 0.00 0.00 33.65 2.43
231 232 6.769512 TGTCCCTTAAATGGATGTATCTAGC 58.230 40.000 0.00 0.00 33.65 3.42
232 233 6.328934 TGTCCCTTAAATGGATGTATCTAGCA 59.671 38.462 0.00 0.00 33.65 3.49
233 234 6.651225 GTCCCTTAAATGGATGTATCTAGCAC 59.349 42.308 0.00 0.00 33.65 4.40
234 235 6.558775 TCCCTTAAATGGATGTATCTAGCACT 59.441 38.462 0.00 0.00 0.00 4.40
235 236 7.733047 TCCCTTAAATGGATGTATCTAGCACTA 59.267 37.037 0.00 0.00 0.00 2.74
236 237 8.375506 CCCTTAAATGGATGTATCTAGCACTAA 58.624 37.037 0.00 0.00 0.00 2.24
237 238 9.209175 CCTTAAATGGATGTATCTAGCACTAAC 57.791 37.037 0.00 0.00 0.00 2.34
238 239 9.988815 CTTAAATGGATGTATCTAGCACTAACT 57.011 33.333 0.00 0.00 0.00 2.24
296 297 6.815359 CATGTCGATCATGCTTATAGTGAAC 58.185 40.000 12.77 0.00 45.69 3.18
349 1240 7.451255 TGAATAATTTGAGTCCAAGTCCACATT 59.549 33.333 0.00 0.00 33.23 2.71
401 1318 3.005897 TCTGTCCTGAAGTAGAGTTGCAC 59.994 47.826 0.00 0.00 0.00 4.57
429 1347 2.032681 GCCCACGTTGAGAGCCTT 59.967 61.111 0.00 0.00 0.00 4.35
435 1353 2.213499 CACGTTGAGAGCCTTTCAGTT 58.787 47.619 0.00 0.00 0.00 3.16
436 1354 3.390135 CACGTTGAGAGCCTTTCAGTTA 58.610 45.455 0.00 0.00 0.00 2.24
437 1355 3.997021 CACGTTGAGAGCCTTTCAGTTAT 59.003 43.478 0.00 0.00 0.00 1.89
438 1356 5.168569 CACGTTGAGAGCCTTTCAGTTATA 58.831 41.667 0.00 0.00 0.00 0.98
439 1357 5.812642 CACGTTGAGAGCCTTTCAGTTATAT 59.187 40.000 0.00 0.00 0.00 0.86
484 1404 6.603237 TGTCCAGTCGATATTTTGCAATAG 57.397 37.500 0.00 0.00 0.00 1.73
485 1405 5.007626 TGTCCAGTCGATATTTTGCAATAGC 59.992 40.000 0.00 0.00 42.57 2.97
553 1488 7.537715 TGACTGCACATATATTCAACAAAAGG 58.462 34.615 0.00 0.00 0.00 3.11
600 7848 4.219288 GGGACATGTTTGCTCTTCAAGATT 59.781 41.667 0.00 0.00 35.84 2.40
605 7853 5.204409 TGTTTGCTCTTCAAGATTGCAAT 57.796 34.783 12.83 12.83 42.12 3.56
672 7935 0.533491 ACCAACGCAATAGCCGAGTA 59.467 50.000 0.00 0.00 37.52 2.59
700 7971 6.208988 TCTGTTAGTAGTAACATGCTGGAG 57.791 41.667 20.71 9.61 45.95 3.86
737 8019 7.395190 ACTGCATCTTTCATTGTTGCTTATA 57.605 32.000 0.00 0.00 34.47 0.98
781 8070 7.222999 CAGGCTACTTACTTAGTGCACTATTTC 59.777 40.741 26.54 8.78 37.73 2.17
839 8137 3.955471 AGACTGCAAGCTAATTTAGGCA 58.045 40.909 5.61 5.80 37.60 4.75
840 8138 4.335416 AGACTGCAAGCTAATTTAGGCAA 58.665 39.130 5.61 0.00 37.60 4.52
841 8139 4.952335 AGACTGCAAGCTAATTTAGGCAAT 59.048 37.500 5.61 0.00 37.60 3.56
842 8140 5.002464 ACTGCAAGCTAATTTAGGCAATG 57.998 39.130 5.61 0.04 37.60 2.82
843 8141 4.142093 ACTGCAAGCTAATTTAGGCAATGG 60.142 41.667 5.61 0.00 37.60 3.16
844 8142 3.132646 TGCAAGCTAATTTAGGCAATGGG 59.867 43.478 5.61 0.00 0.00 4.00
846 8144 4.340950 GCAAGCTAATTTAGGCAATGGGTA 59.659 41.667 5.61 0.00 0.00 3.69
983 8281 3.126453 ACCTCCAGAGATAAAGGGCAAT 58.874 45.455 0.00 0.00 32.97 3.56
1062 8360 1.203100 GGAGGGATGCATGGGCTAATT 60.203 52.381 2.46 0.00 41.91 1.40
1063 8361 2.041620 GGAGGGATGCATGGGCTAATTA 59.958 50.000 2.46 0.00 41.91 1.40
1064 8362 3.500289 GGAGGGATGCATGGGCTAATTAA 60.500 47.826 2.46 0.00 41.91 1.40
1065 8363 4.347607 GAGGGATGCATGGGCTAATTAAT 58.652 43.478 2.46 0.00 41.91 1.40
1104 8402 1.984990 CGTGATGGAAATTTTGCACGG 59.015 47.619 19.31 8.39 43.57 4.94
1307 8605 2.099263 CCTCGTGCCTCTTTTCTATCGA 59.901 50.000 0.00 0.00 0.00 3.59
1417 8715 3.425162 ACATTTTCTCCTCCACAGACC 57.575 47.619 0.00 0.00 0.00 3.85
1465 8763 4.227300 TCTGCCCCATACTGACTAATTTGT 59.773 41.667 0.00 0.00 0.00 2.83
1466 8764 4.523083 TGCCCCATACTGACTAATTTGTC 58.477 43.478 12.40 12.40 37.47 3.18
1489 8787 5.418840 TCATTAACTTCTTTTGAGGGCATCC 59.581 40.000 0.00 0.00 0.00 3.51
1556 8857 5.500234 TGATGGGGACTTTGAAGACATTAG 58.500 41.667 0.00 0.00 0.00 1.73
1573 8874 6.102615 AGACATTAGTTTGGATGCCCCTAATA 59.897 38.462 0.00 0.00 32.50 0.98
1582 8883 2.505672 TGCCCCTAATATGGAGGTGA 57.494 50.000 3.79 0.00 31.52 4.02
1629 8930 7.664082 AGCTAAATCATATCAATCTGTTCCG 57.336 36.000 0.00 0.00 0.00 4.30
1683 8984 3.330701 AGTCATTGGGAAGCCTAAGTGAA 59.669 43.478 0.00 0.00 0.00 3.18
1686 8987 5.885912 GTCATTGGGAAGCCTAAGTGAAATA 59.114 40.000 0.00 0.00 0.00 1.40
1804 9134 9.703892 TGTTGTCATTTTCTTTTCTTTTCTTGA 57.296 25.926 0.00 0.00 0.00 3.02
1827 9157 3.780294 TGCAGTATCTATCAAAGGGGTGT 59.220 43.478 0.00 0.00 0.00 4.16
1911 9241 1.016653 GCGACCAGAGGCAAGTCTTC 61.017 60.000 0.00 0.00 0.00 2.87
1967 9297 1.200948 GAAGAAGCTTCACATGTGGGC 59.799 52.381 27.57 25.64 0.00 5.36
1971 9301 2.562912 CTTCACATGTGGGCACGC 59.437 61.111 25.16 0.00 0.00 5.34
2013 9344 0.684479 CTCCCTCAGTCACCCGATCA 60.684 60.000 0.00 0.00 0.00 2.92
2051 9393 7.668052 TGTATTTAAGGCACCTAATGAGTTGTT 59.332 33.333 0.00 0.00 0.00 2.83
2147 9505 6.989155 ATGCAAATGGACCATCTCATAATT 57.011 33.333 7.63 0.00 0.00 1.40
2154 9512 4.411869 TGGACCATCTCATAATTGCCAGTA 59.588 41.667 0.00 0.00 0.00 2.74
2261 9619 0.552848 AGTGGATGGGCGAAATGGAT 59.447 50.000 0.00 0.00 0.00 3.41
2339 9742 8.072567 GCCAAGATCATTGTTACATGATAAGTC 58.927 37.037 0.00 1.53 37.61 3.01
2370 9773 6.183360 CCTCATCACTTTGCCGATCTAATTTT 60.183 38.462 0.00 0.00 0.00 1.82
2479 9897 3.936372 TCAGGTAGCTGTAGTGTGTTC 57.064 47.619 20.76 0.00 0.00 3.18
2484 9902 3.741344 GGTAGCTGTAGTGTGTTCTGTTG 59.259 47.826 0.00 0.00 0.00 3.33
2582 10088 0.463654 AGCTCGTCCTGTTTTGTGCA 60.464 50.000 0.00 0.00 0.00 4.57
2600 10106 3.868077 GTGCAGGTGTTCTGTCTATGATC 59.132 47.826 0.00 0.00 45.08 2.92
2630 10145 7.116075 TCCTGGTTGTAGCAAATATATGTGTT 58.884 34.615 4.80 1.19 0.00 3.32
2841 10420 8.336801 TGCTCCTAAATCTCCTTTTCTTTTAC 57.663 34.615 0.00 0.00 0.00 2.01
2843 10422 9.668497 GCTCCTAAATCTCCTTTTCTTTTACTA 57.332 33.333 0.00 0.00 0.00 1.82
2851 10430 9.993454 ATCTCCTTTTCTTTTACTAGTAAACGT 57.007 29.630 24.39 4.32 35.05 3.99
2852 10431 9.252962 TCTCCTTTTCTTTTACTAGTAAACGTG 57.747 33.333 24.39 17.51 35.05 4.49
2853 10432 7.854534 TCCTTTTCTTTTACTAGTAAACGTGC 58.145 34.615 24.39 0.00 35.05 5.34
2854 10433 7.495279 TCCTTTTCTTTTACTAGTAAACGTGCA 59.505 33.333 24.39 11.08 35.05 4.57
2855 10434 8.287503 CCTTTTCTTTTACTAGTAAACGTGCAT 58.712 33.333 24.39 0.00 35.05 3.96
2856 10435 8.996988 TTTTCTTTTACTAGTAAACGTGCATG 57.003 30.769 24.39 3.82 35.05 4.06
2857 10436 6.160664 TCTTTTACTAGTAAACGTGCATGC 57.839 37.500 24.39 11.82 35.05 4.06
2858 10437 4.571375 TTTACTAGTAAACGTGCATGCG 57.429 40.909 21.52 1.59 37.94 4.73
2860 10439 5.614300 TTTACTAGTAAACGTGCATGCGCA 61.614 41.667 29.19 14.96 36.61 6.09
2862 10441 8.258842 TTTACTAGTAAACGTGCATGCGCAAT 62.259 38.462 29.19 15.04 38.79 3.56
2875 10454 2.276058 GCAATGCGCGTCTTCGTC 60.276 61.111 8.43 0.00 39.49 4.20
2876 10455 2.730672 GCAATGCGCGTCTTCGTCT 61.731 57.895 8.43 0.00 39.49 4.18
2878 10457 1.080772 AATGCGCGTCTTCGTCTCA 60.081 52.632 8.43 0.00 39.49 3.27
2879 10458 0.666274 AATGCGCGTCTTCGTCTCAA 60.666 50.000 8.43 0.00 39.49 3.02
2881 10460 2.717809 GCGCGTCTTCGTCTCAACC 61.718 63.158 8.43 0.00 39.49 3.77
2882 10461 1.371267 CGCGTCTTCGTCTCAACCA 60.371 57.895 0.00 0.00 39.49 3.67
2884 10463 1.429463 GCGTCTTCGTCTCAACCAAT 58.571 50.000 0.00 0.00 39.49 3.16
2885 10464 2.602878 GCGTCTTCGTCTCAACCAATA 58.397 47.619 0.00 0.00 39.49 1.90
2886 10465 3.187700 GCGTCTTCGTCTCAACCAATAT 58.812 45.455 0.00 0.00 39.49 1.28
2887 10466 4.357142 GCGTCTTCGTCTCAACCAATATA 58.643 43.478 0.00 0.00 39.49 0.86
2888 10467 4.441415 GCGTCTTCGTCTCAACCAATATAG 59.559 45.833 0.00 0.00 39.49 1.31
2889 10468 5.732528 GCGTCTTCGTCTCAACCAATATAGA 60.733 44.000 0.00 0.00 39.49 1.98
2890 10469 6.439599 CGTCTTCGTCTCAACCAATATAGAT 58.560 40.000 0.00 0.00 0.00 1.98
2891 10470 6.918569 CGTCTTCGTCTCAACCAATATAGATT 59.081 38.462 0.00 0.00 0.00 2.40
2893 10472 7.921214 GTCTTCGTCTCAACCAATATAGATTCA 59.079 37.037 0.00 0.00 0.00 2.57
2894 10473 8.474831 TCTTCGTCTCAACCAATATAGATTCAA 58.525 33.333 0.00 0.00 0.00 2.69
2895 10474 8.420374 TTCGTCTCAACCAATATAGATTCAAC 57.580 34.615 0.00 0.00 0.00 3.18
2896 10475 7.552459 TCGTCTCAACCAATATAGATTCAACA 58.448 34.615 0.00 0.00 0.00 3.33
2897 10476 8.038351 TCGTCTCAACCAATATAGATTCAACAA 58.962 33.333 0.00 0.00 0.00 2.83
2898 10477 8.664798 CGTCTCAACCAATATAGATTCAACAAA 58.335 33.333 0.00 0.00 0.00 2.83
2908 10487 8.931385 ATATAGATTCAACAAAAACACATGGC 57.069 30.769 0.00 0.00 0.00 4.40
2909 10488 5.021033 AGATTCAACAAAAACACATGGCA 57.979 34.783 0.00 0.00 0.00 4.92
2912 10673 3.464907 TCAACAAAAACACATGGCATGG 58.535 40.909 29.49 20.36 33.60 3.66
2918 10679 0.319083 AACACATGGCATGGCAGTTG 59.681 50.000 29.49 25.10 33.60 3.16
2922 10683 2.427812 CACATGGCATGGCAGTTGATAA 59.572 45.455 29.49 0.67 33.60 1.75
2928 10689 7.398047 ACATGGCATGGCAGTTGATAATATTAT 59.602 33.333 29.49 7.72 33.60 1.28
2930 10691 8.876303 TGGCATGGCAGTTGATAATATTATTA 57.124 30.769 19.43 2.72 0.00 0.98
2932 10693 9.956720 GGCATGGCAGTTGATAATATTATTATC 57.043 33.333 21.80 21.80 33.25 1.75
2933 10694 9.956720 GCATGGCAGTTGATAATATTATTATCC 57.043 33.333 24.05 14.71 31.99 2.59
2950 10711 6.636454 ATTATCCCTAGTCTTTTCCACACA 57.364 37.500 0.00 0.00 0.00 3.72
2951 10712 4.993705 ATCCCTAGTCTTTTCCACACAA 57.006 40.909 0.00 0.00 0.00 3.33
2953 10714 6.636454 ATCCCTAGTCTTTTCCACACAATA 57.364 37.500 0.00 0.00 0.00 1.90
2954 10715 6.049955 TCCCTAGTCTTTTCCACACAATAG 57.950 41.667 0.00 0.00 0.00 1.73
2956 10717 6.271391 TCCCTAGTCTTTTCCACACAATAGAA 59.729 38.462 0.00 0.00 0.00 2.10
2958 10719 7.066284 CCCTAGTCTTTTCCACACAATAGAATG 59.934 40.741 0.00 0.00 0.00 2.67
2959 10720 7.824289 CCTAGTCTTTTCCACACAATAGAATGA 59.176 37.037 0.00 0.00 0.00 2.57
2960 10721 9.388506 CTAGTCTTTTCCACACAATAGAATGAT 57.611 33.333 0.00 0.00 0.00 2.45
2964 10725 8.514594 TCTTTTCCACACAATAGAATGATTGTC 58.485 33.333 0.00 0.00 44.89 3.18
2966 10727 5.814481 TCCACACAATAGAATGATTGTCCA 58.186 37.500 0.00 0.00 44.89 4.02
2967 10728 5.882000 TCCACACAATAGAATGATTGTCCAG 59.118 40.000 0.00 0.00 44.89 3.86
2968 10729 5.649395 CCACACAATAGAATGATTGTCCAGT 59.351 40.000 0.00 0.00 44.89 4.00
2969 10730 6.823182 CCACACAATAGAATGATTGTCCAGTA 59.177 38.462 0.00 0.00 44.89 2.74
2970 10731 7.011763 CCACACAATAGAATGATTGTCCAGTAG 59.988 40.741 0.00 0.00 44.89 2.57
2971 10732 6.540189 ACACAATAGAATGATTGTCCAGTAGC 59.460 38.462 0.00 0.00 44.89 3.58
2973 10734 7.228108 CACAATAGAATGATTGTCCAGTAGCAT 59.772 37.037 0.00 0.00 44.89 3.79
2974 10735 8.432013 ACAATAGAATGATTGTCCAGTAGCATA 58.568 33.333 0.00 0.00 44.89 3.14
2975 10736 8.933807 CAATAGAATGATTGTCCAGTAGCATAG 58.066 37.037 0.00 0.00 33.01 2.23
2976 10737 6.737720 AGAATGATTGTCCAGTAGCATAGA 57.262 37.500 0.00 0.00 0.00 1.98
2977 10738 6.520272 AGAATGATTGTCCAGTAGCATAGAC 58.480 40.000 0.00 0.00 0.00 2.59
2985 10746 6.237901 TGTCCAGTAGCATAGACAAAACATT 58.762 36.000 0.00 0.00 36.36 2.71
2986 10747 6.371548 TGTCCAGTAGCATAGACAAAACATTC 59.628 38.462 0.00 0.00 36.36 2.67
2987 10748 5.580691 TCCAGTAGCATAGACAAAACATTCG 59.419 40.000 0.00 0.00 0.00 3.34
2989 10750 6.243551 CAGTAGCATAGACAAAACATTCGTG 58.756 40.000 0.00 0.00 0.00 4.35
2991 10752 3.440173 AGCATAGACAAAACATTCGTGGG 59.560 43.478 0.00 0.00 0.00 4.61
2992 10753 3.190535 GCATAGACAAAACATTCGTGGGT 59.809 43.478 0.00 0.00 0.00 4.51
2995 10756 3.811083 AGACAAAACATTCGTGGGTACA 58.189 40.909 0.00 0.00 0.00 2.90
2996 10757 4.200874 AGACAAAACATTCGTGGGTACAA 58.799 39.130 0.00 0.00 0.00 2.41
2998 10759 4.674475 ACAAAACATTCGTGGGTACAAAC 58.326 39.130 0.00 0.00 0.00 2.93
2999 10760 4.399934 ACAAAACATTCGTGGGTACAAACT 59.600 37.500 0.00 0.00 0.00 2.66
3000 10761 5.105675 ACAAAACATTCGTGGGTACAAACTT 60.106 36.000 0.00 0.00 0.00 2.66
3003 10764 5.177725 ACATTCGTGGGTACAAACTTTTC 57.822 39.130 0.00 0.00 0.00 2.29
3004 10765 4.641094 ACATTCGTGGGTACAAACTTTTCA 59.359 37.500 0.00 0.00 0.00 2.69
3005 10766 5.125739 ACATTCGTGGGTACAAACTTTTCAA 59.874 36.000 0.00 0.00 0.00 2.69
3007 10768 6.939132 TTCGTGGGTACAAACTTTTCAATA 57.061 33.333 0.00 0.00 0.00 1.90
3008 10769 7.513371 TTCGTGGGTACAAACTTTTCAATAT 57.487 32.000 0.00 0.00 0.00 1.28
3009 10770 7.513371 TCGTGGGTACAAACTTTTCAATATT 57.487 32.000 0.00 0.00 0.00 1.28
3010 10771 7.586747 TCGTGGGTACAAACTTTTCAATATTC 58.413 34.615 0.00 0.00 0.00 1.75
3011 10772 7.228906 TCGTGGGTACAAACTTTTCAATATTCA 59.771 33.333 0.00 0.00 0.00 2.57
3012 10773 8.026607 CGTGGGTACAAACTTTTCAATATTCAT 58.973 33.333 0.00 0.00 0.00 2.57
3045 10806 7.970102 AGAAGATGTAAAAGTAGGTTACACCA 58.030 34.615 0.00 0.00 42.58 4.17
3046 10807 8.603304 AGAAGATGTAAAAGTAGGTTACACCAT 58.397 33.333 0.00 0.00 42.58 3.55
3049 10810 8.380099 AGATGTAAAAGTAGGTTACACCATGAA 58.620 33.333 0.00 0.00 42.58 2.57
3050 10811 7.733402 TGTAAAAGTAGGTTACACCATGAAC 57.267 36.000 0.00 0.00 41.95 3.18
3051 10812 7.281098 TGTAAAAGTAGGTTACACCATGAACA 58.719 34.615 0.00 0.00 41.95 3.18
3052 10813 7.940137 TGTAAAAGTAGGTTACACCATGAACAT 59.060 33.333 0.00 0.00 41.95 2.71
3053 10814 7.833285 AAAAGTAGGTTACACCATGAACATT 57.167 32.000 0.00 0.00 41.95 2.71
3054 10815 6.817765 AAGTAGGTTACACCATGAACATTG 57.182 37.500 0.00 0.00 41.95 2.82
3056 10817 6.303839 AGTAGGTTACACCATGAACATTGTT 58.696 36.000 0.63 0.63 41.95 2.83
3057 10818 6.775629 AGTAGGTTACACCATGAACATTGTTT 59.224 34.615 3.08 0.00 41.95 2.83
3058 10819 7.940137 AGTAGGTTACACCATGAACATTGTTTA 59.060 33.333 3.08 0.00 41.95 2.01
3059 10820 7.589958 AGGTTACACCATGAACATTGTTTAA 57.410 32.000 3.08 0.00 41.95 1.52
3061 10822 7.923878 AGGTTACACCATGAACATTGTTTAAAC 59.076 33.333 11.54 11.54 41.95 2.01
3062 10823 7.707035 GGTTACACCATGAACATTGTTTAAACA 59.293 33.333 17.01 17.01 38.42 2.83
3064 10825 9.823647 TTACACCATGAACATTGTTTAAACATT 57.176 25.926 21.17 14.93 38.95 2.71
3066 10827 9.995003 ACACCATGAACATTGTTTAAACATTAT 57.005 25.926 21.17 10.42 38.95 1.28
3107 10868 9.569122 TTAGCCTCTTATGAATTAATACCAACC 57.431 33.333 0.00 0.00 0.00 3.77
3108 10869 7.816411 AGCCTCTTATGAATTAATACCAACCT 58.184 34.615 0.00 0.00 0.00 3.50
3109 10870 8.282256 AGCCTCTTATGAATTAATACCAACCTT 58.718 33.333 0.00 0.00 0.00 3.50
3110 10871 8.352942 GCCTCTTATGAATTAATACCAACCTTG 58.647 37.037 0.00 0.00 0.00 3.61
3111 10872 9.627123 CCTCTTATGAATTAATACCAACCTTGA 57.373 33.333 0.00 0.00 0.00 3.02
3118 10879 9.703892 TGAATTAATACCAACCTTGAAATTGTG 57.296 29.630 0.00 0.00 0.00 3.33
3119 10880 8.546597 AATTAATACCAACCTTGAAATTGTGC 57.453 30.769 0.00 0.00 0.00 4.57
3120 10881 5.806654 AATACCAACCTTGAAATTGTGCT 57.193 34.783 0.00 0.00 0.00 4.40
3121 10882 6.909550 AATACCAACCTTGAAATTGTGCTA 57.090 33.333 0.00 0.00 0.00 3.49
3122 10883 6.909550 ATACCAACCTTGAAATTGTGCTAA 57.090 33.333 0.00 0.00 0.00 3.09
3123 10884 4.944048 ACCAACCTTGAAATTGTGCTAAC 58.056 39.130 0.00 0.00 0.00 2.34
3124 10885 4.202212 ACCAACCTTGAAATTGTGCTAACC 60.202 41.667 0.00 0.00 0.00 2.85
3125 10886 4.306600 CAACCTTGAAATTGTGCTAACCC 58.693 43.478 0.00 0.00 0.00 4.11
3126 10887 3.571590 ACCTTGAAATTGTGCTAACCCA 58.428 40.909 0.00 0.00 0.00 4.51
3127 10888 3.573967 ACCTTGAAATTGTGCTAACCCAG 59.426 43.478 0.00 0.00 0.00 4.45
3128 10889 3.826157 CCTTGAAATTGTGCTAACCCAGA 59.174 43.478 0.00 0.00 0.00 3.86
3129 10890 4.280677 CCTTGAAATTGTGCTAACCCAGAA 59.719 41.667 0.00 0.00 0.00 3.02
3130 10891 5.047092 CCTTGAAATTGTGCTAACCCAGAAT 60.047 40.000 0.00 0.00 30.90 2.40
3131 10892 6.152661 CCTTGAAATTGTGCTAACCCAGAATA 59.847 38.462 0.00 0.00 29.68 1.75
3132 10893 7.309744 CCTTGAAATTGTGCTAACCCAGAATAA 60.310 37.037 0.00 0.00 29.68 1.40
3133 10894 7.156876 TGAAATTGTGCTAACCCAGAATAAG 57.843 36.000 0.00 0.00 29.68 1.73
3134 10895 6.945435 TGAAATTGTGCTAACCCAGAATAAGA 59.055 34.615 0.00 0.00 29.68 2.10
3135 10896 7.450014 TGAAATTGTGCTAACCCAGAATAAGAA 59.550 33.333 0.00 0.00 29.68 2.52
3136 10897 7.775053 AATTGTGCTAACCCAGAATAAGAAA 57.225 32.000 0.00 0.00 29.68 2.52
3137 10898 7.775053 ATTGTGCTAACCCAGAATAAGAAAA 57.225 32.000 0.00 0.00 28.21 2.29
3138 10899 6.569179 TGTGCTAACCCAGAATAAGAAAAC 57.431 37.500 0.00 0.00 0.00 2.43
3139 10900 6.303839 TGTGCTAACCCAGAATAAGAAAACT 58.696 36.000 0.00 0.00 0.00 2.66
3140 10901 6.775629 TGTGCTAACCCAGAATAAGAAAACTT 59.224 34.615 0.00 0.00 0.00 2.66
3141 10902 7.286775 TGTGCTAACCCAGAATAAGAAAACTTT 59.713 33.333 0.00 0.00 0.00 2.66
3142 10903 7.595130 GTGCTAACCCAGAATAAGAAAACTTTG 59.405 37.037 0.00 0.00 0.00 2.77
3143 10904 7.090808 GCTAACCCAGAATAAGAAAACTTTGG 58.909 38.462 0.00 0.00 0.00 3.28
3144 10905 7.255836 GCTAACCCAGAATAAGAAAACTTTGGT 60.256 37.037 0.00 0.00 0.00 3.67
3145 10906 9.292195 CTAACCCAGAATAAGAAAACTTTGGTA 57.708 33.333 0.00 0.00 0.00 3.25
3146 10907 8.721133 AACCCAGAATAAGAAAACTTTGGTAT 57.279 30.769 0.00 0.00 0.00 2.73
3147 10908 8.721133 ACCCAGAATAAGAAAACTTTGGTATT 57.279 30.769 0.00 0.00 0.00 1.89
3148 10909 9.154632 ACCCAGAATAAGAAAACTTTGGTATTT 57.845 29.630 0.00 0.00 0.00 1.40
3149 10910 9.996554 CCCAGAATAAGAAAACTTTGGTATTTT 57.003 29.630 0.00 0.00 0.00 1.82
3168 10929 9.442047 GGTATTTTAGAACTAGATCATGATGGG 57.558 37.037 14.30 5.34 0.00 4.00
3169 10930 7.992754 ATTTTAGAACTAGATCATGATGGGC 57.007 36.000 14.30 0.00 0.00 5.36
3170 10931 6.499106 TTTAGAACTAGATCATGATGGGCA 57.501 37.500 14.30 0.00 0.00 5.36
3171 10932 4.348863 AGAACTAGATCATGATGGGCAC 57.651 45.455 14.30 0.00 0.00 5.01
3172 10933 2.827800 ACTAGATCATGATGGGCACG 57.172 50.000 14.30 0.00 0.00 5.34
3173 10934 1.270518 ACTAGATCATGATGGGCACGC 60.271 52.381 14.30 0.00 0.00 5.34
3174 10935 0.319813 TAGATCATGATGGGCACGCG 60.320 55.000 14.30 3.53 0.00 6.01
3175 10936 1.889105 GATCATGATGGGCACGCGT 60.889 57.895 14.30 5.58 0.00 6.01
3176 10937 1.439353 GATCATGATGGGCACGCGTT 61.439 55.000 14.30 0.00 0.00 4.84
3177 10938 1.031571 ATCATGATGGGCACGCGTTT 61.032 50.000 10.22 0.00 0.00 3.60
3178 10939 1.212490 CATGATGGGCACGCGTTTT 59.788 52.632 10.22 0.00 0.00 2.43
3179 10940 0.798009 CATGATGGGCACGCGTTTTC 60.798 55.000 10.22 0.89 0.00 2.29
3181 10942 2.961669 GATGGGCACGCGTTTTCGT 61.962 57.895 10.22 2.51 46.03 3.85
3189 10950 3.343421 GCGTTTTCGTGGCCGTCT 61.343 61.111 0.00 0.00 46.03 4.18
3190 10951 2.023223 GCGTTTTCGTGGCCGTCTA 61.023 57.895 0.00 0.00 46.03 2.59
3191 10952 1.356527 GCGTTTTCGTGGCCGTCTAT 61.357 55.000 0.00 0.00 46.03 1.98
3192 10953 1.073177 CGTTTTCGTGGCCGTCTATT 58.927 50.000 0.00 0.00 38.65 1.73
3193 10954 1.461897 CGTTTTCGTGGCCGTCTATTT 59.538 47.619 0.00 0.00 38.65 1.40
3194 10955 2.723618 CGTTTTCGTGGCCGTCTATTTG 60.724 50.000 0.00 0.00 38.65 2.32
3195 10956 2.172851 TTTCGTGGCCGTCTATTTGT 57.827 45.000 0.00 0.00 35.01 2.83
3196 10957 3.316071 TTTCGTGGCCGTCTATTTGTA 57.684 42.857 0.00 0.00 35.01 2.41
3197 10958 2.282701 TCGTGGCCGTCTATTTGTAC 57.717 50.000 0.00 0.00 35.01 2.90
3198 10959 0.918619 CGTGGCCGTCTATTTGTACG 59.081 55.000 0.00 0.00 38.80 3.67
3211 10972 9.979270 CGTCTATTTGTACGGTAATATAGTAGG 57.021 37.037 0.00 0.00 35.51 3.18
3218 10979 8.396272 TGTACGGTAATATAGTAGGAGTTTCC 57.604 38.462 0.00 0.00 36.58 3.13
3219 10980 7.998383 TGTACGGTAATATAGTAGGAGTTTCCA 59.002 37.037 0.00 0.00 39.61 3.53
3220 10981 7.282332 ACGGTAATATAGTAGGAGTTTCCAC 57.718 40.000 0.00 0.00 39.61 4.02
3221 10982 6.835488 ACGGTAATATAGTAGGAGTTTCCACA 59.165 38.462 0.00 0.00 39.61 4.17
3222 10983 7.342799 ACGGTAATATAGTAGGAGTTTCCACAA 59.657 37.037 0.00 0.00 39.61 3.33
3223 10984 8.199449 CGGTAATATAGTAGGAGTTTCCACAAA 58.801 37.037 0.00 0.00 39.61 2.83
3230 10991 7.016153 AGTAGGAGTTTCCACAAATACATCA 57.984 36.000 0.00 0.00 39.61 3.07
3231 10992 7.458397 AGTAGGAGTTTCCACAAATACATCAA 58.542 34.615 0.00 0.00 39.61 2.57
3232 10993 8.109634 AGTAGGAGTTTCCACAAATACATCAAT 58.890 33.333 0.00 0.00 39.61 2.57
3233 10994 7.161773 AGGAGTTTCCACAAATACATCAATG 57.838 36.000 0.00 0.00 39.61 2.82
3234 10995 6.721208 AGGAGTTTCCACAAATACATCAATGT 59.279 34.615 0.70 0.70 41.01 2.71
3235 10996 7.888021 AGGAGTTTCCACAAATACATCAATGTA 59.112 33.333 5.37 5.37 42.28 2.29
3236 10997 8.686334 GGAGTTTCCACAAATACATCAATGTAT 58.314 33.333 9.36 9.36 44.34 2.29
3323 11084 8.598041 AGATTATACAAATGTGATACTCCCTCC 58.402 37.037 0.00 0.00 0.00 4.30
3324 11085 7.931015 TTATACAAATGTGATACTCCCTCCT 57.069 36.000 0.00 0.00 0.00 3.69
3325 11086 6.831664 ATACAAATGTGATACTCCCTCCTT 57.168 37.500 0.00 0.00 0.00 3.36
3326 11087 5.104259 ACAAATGTGATACTCCCTCCTTC 57.896 43.478 0.00 0.00 0.00 3.46
3327 11088 4.080299 ACAAATGTGATACTCCCTCCTTCC 60.080 45.833 0.00 0.00 0.00 3.46
3328 11089 2.176247 TGTGATACTCCCTCCTTCCC 57.824 55.000 0.00 0.00 0.00 3.97
3329 11090 1.364678 TGTGATACTCCCTCCTTCCCA 59.635 52.381 0.00 0.00 0.00 4.37
3330 11091 2.225779 TGTGATACTCCCTCCTTCCCAA 60.226 50.000 0.00 0.00 0.00 4.12
3331 11092 2.844348 GTGATACTCCCTCCTTCCCAAA 59.156 50.000 0.00 0.00 0.00 3.28
3332 11093 3.265995 GTGATACTCCCTCCTTCCCAAAA 59.734 47.826 0.00 0.00 0.00 2.44
3333 11094 4.079730 GTGATACTCCCTCCTTCCCAAAAT 60.080 45.833 0.00 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 7.970061 GCAACTGAATCTAAACAAGCATATGAA 59.030 33.333 6.97 0.00 0.00 2.57
5 6 7.337689 AGCAACTGAATCTAAACAAGCATATGA 59.662 33.333 6.97 0.00 0.00 2.15
6 7 7.478322 AGCAACTGAATCTAAACAAGCATATG 58.522 34.615 0.00 0.00 0.00 1.78
8 9 7.452880 AAGCAACTGAATCTAAACAAGCATA 57.547 32.000 0.00 0.00 0.00 3.14
25 26 6.998673 ACTAAAGTGGATTCAGTTAAGCAACT 59.001 34.615 0.00 0.00 46.15 3.16
26 27 7.203255 ACTAAAGTGGATTCAGTTAAGCAAC 57.797 36.000 0.00 0.00 35.64 4.17
27 28 7.389607 GGTACTAAAGTGGATTCAGTTAAGCAA 59.610 37.037 0.00 0.00 35.64 3.91
28 29 6.877322 GGTACTAAAGTGGATTCAGTTAAGCA 59.123 38.462 0.00 0.00 35.64 3.91
29 30 6.315642 GGGTACTAAAGTGGATTCAGTTAAGC 59.684 42.308 0.00 0.00 35.64 3.09
30 31 7.549488 CAGGGTACTAAAGTGGATTCAGTTAAG 59.451 40.741 0.00 0.00 35.64 1.85
31 32 7.016858 ACAGGGTACTAAAGTGGATTCAGTTAA 59.983 37.037 0.00 0.00 35.64 2.01
32 33 6.499350 ACAGGGTACTAAAGTGGATTCAGTTA 59.501 38.462 0.00 0.00 35.64 2.24
33 34 5.309806 ACAGGGTACTAAAGTGGATTCAGTT 59.690 40.000 0.00 0.00 38.11 3.16
34 35 4.844655 ACAGGGTACTAAAGTGGATTCAGT 59.155 41.667 0.00 0.00 0.00 3.41
35 36 5.422214 ACAGGGTACTAAAGTGGATTCAG 57.578 43.478 0.00 0.00 0.00 3.02
36 37 5.836024 AACAGGGTACTAAAGTGGATTCA 57.164 39.130 0.00 0.00 0.00 2.57
37 38 8.803397 AAATAACAGGGTACTAAAGTGGATTC 57.197 34.615 0.00 0.00 0.00 2.52
38 39 9.676861 GTAAATAACAGGGTACTAAAGTGGATT 57.323 33.333 0.00 0.00 0.00 3.01
39 40 7.983484 CGTAAATAACAGGGTACTAAAGTGGAT 59.017 37.037 0.00 0.00 0.00 3.41
40 41 7.039082 ACGTAAATAACAGGGTACTAAAGTGGA 60.039 37.037 0.00 0.00 0.00 4.02
41 42 7.099120 ACGTAAATAACAGGGTACTAAAGTGG 58.901 38.462 0.00 0.00 0.00 4.00
42 43 8.437742 CAACGTAAATAACAGGGTACTAAAGTG 58.562 37.037 0.00 0.00 0.00 3.16
43 44 7.118245 GCAACGTAAATAACAGGGTACTAAAGT 59.882 37.037 0.00 0.00 0.00 2.66
44 45 7.332678 AGCAACGTAAATAACAGGGTACTAAAG 59.667 37.037 0.00 0.00 0.00 1.85
45 46 7.160726 AGCAACGTAAATAACAGGGTACTAAA 58.839 34.615 0.00 0.00 0.00 1.85
46 47 6.700352 AGCAACGTAAATAACAGGGTACTAA 58.300 36.000 0.00 0.00 0.00 2.24
47 48 6.284891 AGCAACGTAAATAACAGGGTACTA 57.715 37.500 0.00 0.00 0.00 1.82
48 49 5.156608 AGCAACGTAAATAACAGGGTACT 57.843 39.130 0.00 0.00 0.00 2.73
49 50 5.868043 AAGCAACGTAAATAACAGGGTAC 57.132 39.130 0.00 0.00 0.00 3.34
50 51 6.262720 ACAAAAGCAACGTAAATAACAGGGTA 59.737 34.615 0.00 0.00 0.00 3.69
51 52 5.068067 ACAAAAGCAACGTAAATAACAGGGT 59.932 36.000 0.00 0.00 0.00 4.34
52 53 5.525199 ACAAAAGCAACGTAAATAACAGGG 58.475 37.500 0.00 0.00 0.00 4.45
53 54 6.474102 ACAACAAAAGCAACGTAAATAACAGG 59.526 34.615 0.00 0.00 0.00 4.00
54 55 7.444558 ACAACAAAAGCAACGTAAATAACAG 57.555 32.000 0.00 0.00 0.00 3.16
55 56 7.755822 AGAACAACAAAAGCAACGTAAATAACA 59.244 29.630 0.00 0.00 0.00 2.41
56 57 8.110970 AGAACAACAAAAGCAACGTAAATAAC 57.889 30.769 0.00 0.00 0.00 1.89
57 58 8.185505 AGAGAACAACAAAAGCAACGTAAATAA 58.814 29.630 0.00 0.00 0.00 1.40
58 59 7.699566 AGAGAACAACAAAAGCAACGTAAATA 58.300 30.769 0.00 0.00 0.00 1.40
59 60 6.560711 AGAGAACAACAAAAGCAACGTAAAT 58.439 32.000 0.00 0.00 0.00 1.40
60 61 5.945155 AGAGAACAACAAAAGCAACGTAAA 58.055 33.333 0.00 0.00 0.00 2.01
61 62 5.554822 AGAGAACAACAAAAGCAACGTAA 57.445 34.783 0.00 0.00 0.00 3.18
62 63 5.277154 GCTAGAGAACAACAAAAGCAACGTA 60.277 40.000 0.00 0.00 0.00 3.57
63 64 4.495844 GCTAGAGAACAACAAAAGCAACGT 60.496 41.667 0.00 0.00 0.00 3.99
64 65 3.968724 GCTAGAGAACAACAAAAGCAACG 59.031 43.478 0.00 0.00 0.00 4.10
65 66 5.008118 AGAGCTAGAGAACAACAAAAGCAAC 59.992 40.000 0.00 0.00 0.00 4.17
66 67 5.008019 CAGAGCTAGAGAACAACAAAAGCAA 59.992 40.000 0.00 0.00 0.00 3.91
67 68 4.512944 CAGAGCTAGAGAACAACAAAAGCA 59.487 41.667 0.00 0.00 0.00 3.91
68 69 4.612486 GCAGAGCTAGAGAACAACAAAAGC 60.612 45.833 0.00 0.00 0.00 3.51
69 70 4.512944 TGCAGAGCTAGAGAACAACAAAAG 59.487 41.667 0.00 0.00 0.00 2.27
70 71 4.450976 TGCAGAGCTAGAGAACAACAAAA 58.549 39.130 0.00 0.00 0.00 2.44
71 72 4.060900 CTGCAGAGCTAGAGAACAACAAA 58.939 43.478 8.42 0.00 0.00 2.83
72 73 3.070159 ACTGCAGAGCTAGAGAACAACAA 59.930 43.478 23.35 0.00 0.00 2.83
73 74 2.630098 ACTGCAGAGCTAGAGAACAACA 59.370 45.455 23.35 0.00 0.00 3.33
74 75 2.992543 CACTGCAGAGCTAGAGAACAAC 59.007 50.000 23.35 0.00 0.00 3.32
75 76 2.611473 GCACTGCAGAGCTAGAGAACAA 60.611 50.000 26.34 0.00 0.00 2.83
76 77 1.067283 GCACTGCAGAGCTAGAGAACA 60.067 52.381 26.34 0.00 0.00 3.18
77 78 1.204467 AGCACTGCAGAGCTAGAGAAC 59.796 52.381 33.30 5.04 40.12 3.01
78 79 1.554836 AGCACTGCAGAGCTAGAGAA 58.445 50.000 33.30 0.00 40.12 2.87
79 80 2.426842 TAGCACTGCAGAGCTAGAGA 57.573 50.000 33.38 19.35 41.94 3.10
80 81 3.731652 ATTAGCACTGCAGAGCTAGAG 57.268 47.619 34.16 12.44 43.17 2.43
81 82 4.161189 AGAAATTAGCACTGCAGAGCTAGA 59.839 41.667 34.16 26.96 43.17 2.43
82 83 4.270566 CAGAAATTAGCACTGCAGAGCTAG 59.729 45.833 34.16 22.86 43.17 3.42
83 84 4.081476 TCAGAAATTAGCACTGCAGAGCTA 60.081 41.667 33.38 33.38 41.94 3.32
84 85 3.008330 CAGAAATTAGCACTGCAGAGCT 58.992 45.455 35.36 35.36 44.01 4.09
85 86 3.005554 TCAGAAATTAGCACTGCAGAGC 58.994 45.455 26.32 26.32 0.00 4.09
86 87 4.502016 TCTCAGAAATTAGCACTGCAGAG 58.498 43.478 23.35 14.77 0.00 3.35
87 88 4.541973 TCTCAGAAATTAGCACTGCAGA 57.458 40.909 23.35 0.00 0.00 4.26
88 89 5.814764 ATTCTCAGAAATTAGCACTGCAG 57.185 39.130 13.48 13.48 0.00 4.41
89 90 7.870509 ATAATTCTCAGAAATTAGCACTGCA 57.129 32.000 3.30 0.00 35.25 4.41
101 102 9.832445 ACGCTAGGAAAATAATAATTCTCAGAA 57.168 29.630 0.00 0.00 0.00 3.02
112 113 8.793592 GGGAATGAAATACGCTAGGAAAATAAT 58.206 33.333 0.00 0.00 0.00 1.28
113 114 7.996644 AGGGAATGAAATACGCTAGGAAAATAA 59.003 33.333 0.00 0.00 0.00 1.40
114 115 7.514721 AGGGAATGAAATACGCTAGGAAAATA 58.485 34.615 0.00 0.00 0.00 1.40
115 116 6.365520 AGGGAATGAAATACGCTAGGAAAAT 58.634 36.000 0.00 0.00 0.00 1.82
116 117 5.751586 AGGGAATGAAATACGCTAGGAAAA 58.248 37.500 0.00 0.00 0.00 2.29
117 118 5.367945 AGGGAATGAAATACGCTAGGAAA 57.632 39.130 0.00 0.00 0.00 3.13
118 119 6.325545 TCTTAGGGAATGAAATACGCTAGGAA 59.674 38.462 0.00 0.00 34.37 3.36
119 120 5.836898 TCTTAGGGAATGAAATACGCTAGGA 59.163 40.000 0.00 0.00 34.68 2.94
120 121 6.097915 TCTTAGGGAATGAAATACGCTAGG 57.902 41.667 0.00 0.00 32.46 3.02
121 122 7.711339 AGTTTCTTAGGGAATGAAATACGCTAG 59.289 37.037 0.00 0.00 33.20 3.42
122 123 7.562135 AGTTTCTTAGGGAATGAAATACGCTA 58.438 34.615 0.00 0.00 33.20 4.26
123 124 6.415573 AGTTTCTTAGGGAATGAAATACGCT 58.584 36.000 0.00 0.00 33.20 5.07
124 125 6.679327 AGTTTCTTAGGGAATGAAATACGC 57.321 37.500 0.00 0.00 33.20 4.42
125 126 9.595823 TCTTAGTTTCTTAGGGAATGAAATACG 57.404 33.333 0.00 0.00 33.20 3.06
148 149 9.750125 GTTCCAACTGACAATTAAATCTTTCTT 57.250 29.630 0.00 0.00 0.00 2.52
149 150 8.360390 GGTTCCAACTGACAATTAAATCTTTCT 58.640 33.333 0.00 0.00 0.00 2.52
150 151 8.360390 AGGTTCCAACTGACAATTAAATCTTTC 58.640 33.333 0.00 0.00 0.00 2.62
151 152 8.250143 AGGTTCCAACTGACAATTAAATCTTT 57.750 30.769 0.00 0.00 0.00 2.52
152 153 7.839680 AGGTTCCAACTGACAATTAAATCTT 57.160 32.000 0.00 0.00 0.00 2.40
153 154 8.164070 AGTAGGTTCCAACTGACAATTAAATCT 58.836 33.333 0.00 0.00 0.00 2.40
154 155 8.336801 AGTAGGTTCCAACTGACAATTAAATC 57.663 34.615 0.00 0.00 0.00 2.17
155 156 8.164070 AGAGTAGGTTCCAACTGACAATTAAAT 58.836 33.333 0.00 0.00 0.00 1.40
156 157 7.514721 AGAGTAGGTTCCAACTGACAATTAAA 58.485 34.615 0.00 0.00 0.00 1.52
157 158 7.074653 AGAGTAGGTTCCAACTGACAATTAA 57.925 36.000 0.00 0.00 0.00 1.40
158 159 6.681729 AGAGTAGGTTCCAACTGACAATTA 57.318 37.500 0.00 0.00 0.00 1.40
159 160 5.568620 AGAGTAGGTTCCAACTGACAATT 57.431 39.130 0.00 0.00 0.00 2.32
160 161 5.780793 ACTAGAGTAGGTTCCAACTGACAAT 59.219 40.000 0.00 0.00 0.00 2.71
161 162 5.145564 ACTAGAGTAGGTTCCAACTGACAA 58.854 41.667 0.00 0.00 0.00 3.18
162 163 4.737578 ACTAGAGTAGGTTCCAACTGACA 58.262 43.478 0.00 0.00 0.00 3.58
163 164 5.945191 AGTACTAGAGTAGGTTCCAACTGAC 59.055 44.000 0.00 0.00 0.00 3.51
164 165 6.137104 AGTACTAGAGTAGGTTCCAACTGA 57.863 41.667 0.00 0.00 0.00 3.41
165 166 5.357596 GGAGTACTAGAGTAGGTTCCAACTG 59.642 48.000 0.00 0.00 31.92 3.16
166 167 5.508567 GGAGTACTAGAGTAGGTTCCAACT 58.491 45.833 0.00 0.00 31.92 3.16
167 168 4.644234 GGGAGTACTAGAGTAGGTTCCAAC 59.356 50.000 0.00 0.00 32.61 3.77
168 169 4.543337 AGGGAGTACTAGAGTAGGTTCCAA 59.457 45.833 0.00 0.00 32.61 3.53
169 170 4.117632 AGGGAGTACTAGAGTAGGTTCCA 58.882 47.826 0.00 0.00 32.61 3.53
170 171 4.446167 GGAGGGAGTACTAGAGTAGGTTCC 60.446 54.167 0.00 6.39 0.00 3.62
171 172 4.717877 GGAGGGAGTACTAGAGTAGGTTC 58.282 52.174 0.00 0.00 0.00 3.62
172 173 3.136260 CGGAGGGAGTACTAGAGTAGGTT 59.864 52.174 0.00 0.00 0.00 3.50
173 174 2.705127 CGGAGGGAGTACTAGAGTAGGT 59.295 54.545 0.00 0.00 0.00 3.08
174 175 2.705127 ACGGAGGGAGTACTAGAGTAGG 59.295 54.545 0.00 0.00 0.00 3.18
175 176 3.244181 GGACGGAGGGAGTACTAGAGTAG 60.244 56.522 0.00 0.00 0.00 2.57
176 177 2.703007 GGACGGAGGGAGTACTAGAGTA 59.297 54.545 0.00 0.00 0.00 2.59
177 178 1.490069 GGACGGAGGGAGTACTAGAGT 59.510 57.143 0.00 0.00 0.00 3.24
178 179 1.540797 CGGACGGAGGGAGTACTAGAG 60.541 61.905 0.00 0.00 0.00 2.43
179 180 0.467384 CGGACGGAGGGAGTACTAGA 59.533 60.000 0.00 0.00 0.00 2.43
180 181 0.467384 TCGGACGGAGGGAGTACTAG 59.533 60.000 0.00 0.00 0.00 2.57
181 182 0.911769 TTCGGACGGAGGGAGTACTA 59.088 55.000 0.00 0.00 0.00 1.82
182 183 0.038744 TTTCGGACGGAGGGAGTACT 59.961 55.000 0.00 0.00 0.00 2.73
183 184 0.890683 TTTTCGGACGGAGGGAGTAC 59.109 55.000 0.00 0.00 0.00 2.73
184 185 1.547372 CTTTTTCGGACGGAGGGAGTA 59.453 52.381 0.00 0.00 0.00 2.59
185 186 0.320697 CTTTTTCGGACGGAGGGAGT 59.679 55.000 0.00 0.00 0.00 3.85
186 187 0.320697 ACTTTTTCGGACGGAGGGAG 59.679 55.000 0.00 0.00 0.00 4.30
187 188 0.760572 AACTTTTTCGGACGGAGGGA 59.239 50.000 0.00 0.00 0.00 4.20
188 189 1.265905 CAAACTTTTTCGGACGGAGGG 59.734 52.381 0.00 0.00 0.00 4.30
189 190 1.944709 ACAAACTTTTTCGGACGGAGG 59.055 47.619 0.00 0.00 0.00 4.30
190 191 2.032290 GGACAAACTTTTTCGGACGGAG 60.032 50.000 0.00 0.00 0.00 4.63
191 192 1.941975 GGACAAACTTTTTCGGACGGA 59.058 47.619 0.00 0.00 0.00 4.69
192 193 1.002142 GGGACAAACTTTTTCGGACGG 60.002 52.381 0.00 0.00 0.00 4.79
193 194 1.944709 AGGGACAAACTTTTTCGGACG 59.055 47.619 0.00 0.00 0.00 4.79
194 195 5.503662 TTAAGGGACAAACTTTTTCGGAC 57.496 39.130 0.00 0.00 0.00 4.79
195 196 6.461788 CCATTTAAGGGACAAACTTTTTCGGA 60.462 38.462 0.00 0.00 0.00 4.55
196 197 5.694458 CCATTTAAGGGACAAACTTTTTCGG 59.306 40.000 0.00 0.00 0.00 4.30
197 198 6.508777 TCCATTTAAGGGACAAACTTTTTCG 58.491 36.000 0.00 0.00 0.00 3.46
198 199 7.931407 ACATCCATTTAAGGGACAAACTTTTTC 59.069 33.333 0.00 0.00 37.23 2.29
199 200 7.801104 ACATCCATTTAAGGGACAAACTTTTT 58.199 30.769 0.00 0.00 37.23 1.94
200 201 7.373617 ACATCCATTTAAGGGACAAACTTTT 57.626 32.000 0.00 0.00 37.23 2.27
201 202 6.994421 ACATCCATTTAAGGGACAAACTTT 57.006 33.333 0.00 0.00 37.23 2.66
202 203 8.116026 AGATACATCCATTTAAGGGACAAACTT 58.884 33.333 0.00 0.00 37.23 2.66
203 204 7.643123 AGATACATCCATTTAAGGGACAAACT 58.357 34.615 0.00 0.00 37.23 2.66
204 205 7.881775 AGATACATCCATTTAAGGGACAAAC 57.118 36.000 0.00 0.00 37.23 2.93
205 206 7.719633 GCTAGATACATCCATTTAAGGGACAAA 59.280 37.037 0.00 0.00 37.23 2.83
206 207 7.147391 TGCTAGATACATCCATTTAAGGGACAA 60.147 37.037 0.00 0.00 37.23 3.18
207 208 6.328934 TGCTAGATACATCCATTTAAGGGACA 59.671 38.462 0.00 0.00 37.23 4.02
208 209 6.651225 GTGCTAGATACATCCATTTAAGGGAC 59.349 42.308 0.00 0.00 37.23 4.46
209 210 6.558775 AGTGCTAGATACATCCATTTAAGGGA 59.441 38.462 0.00 0.00 39.14 4.20
210 211 6.773638 AGTGCTAGATACATCCATTTAAGGG 58.226 40.000 0.00 0.00 0.00 3.95
211 212 9.209175 GTTAGTGCTAGATACATCCATTTAAGG 57.791 37.037 0.00 0.00 0.00 2.69
212 213 9.988815 AGTTAGTGCTAGATACATCCATTTAAG 57.011 33.333 0.00 0.00 0.00 1.85
215 216 8.589338 CCTAGTTAGTGCTAGATACATCCATTT 58.411 37.037 0.00 0.00 40.54 2.32
216 217 7.179338 CCCTAGTTAGTGCTAGATACATCCATT 59.821 40.741 0.00 0.00 40.54 3.16
217 218 6.665680 CCCTAGTTAGTGCTAGATACATCCAT 59.334 42.308 0.00 0.00 40.54 3.41
218 219 6.010850 CCCTAGTTAGTGCTAGATACATCCA 58.989 44.000 0.00 0.00 40.54 3.41
219 220 6.246919 TCCCTAGTTAGTGCTAGATACATCC 58.753 44.000 0.00 0.00 40.54 3.51
220 221 6.943718 ACTCCCTAGTTAGTGCTAGATACATC 59.056 42.308 0.00 0.00 40.54 3.06
221 222 6.854578 ACTCCCTAGTTAGTGCTAGATACAT 58.145 40.000 0.00 0.00 40.54 2.29
222 223 6.263412 ACTCCCTAGTTAGTGCTAGATACA 57.737 41.667 0.00 0.00 40.54 2.29
223 224 7.452562 AGTACTCCCTAGTTAGTGCTAGATAC 58.547 42.308 9.60 0.00 40.54 2.24
224 225 7.630005 AGTACTCCCTAGTTAGTGCTAGATA 57.370 40.000 9.60 0.00 40.54 1.98
225 226 6.518516 AGTACTCCCTAGTTAGTGCTAGAT 57.481 41.667 9.60 0.00 40.54 1.98
226 227 5.972327 AGTACTCCCTAGTTAGTGCTAGA 57.028 43.478 9.60 0.00 40.54 2.43
227 228 7.281841 ACTAAGTACTCCCTAGTTAGTGCTAG 58.718 42.308 11.13 10.87 44.76 3.42
228 229 7.205515 ACTAAGTACTCCCTAGTTAGTGCTA 57.794 40.000 11.13 2.81 44.76 3.49
229 230 6.077202 ACTAAGTACTCCCTAGTTAGTGCT 57.923 41.667 0.00 6.52 44.76 4.40
230 231 6.825721 TGTACTAAGTACTCCCTAGTTAGTGC 59.174 42.308 10.27 9.47 45.49 4.40
231 232 7.010923 CGTGTACTAAGTACTCCCTAGTTAGTG 59.989 44.444 10.27 0.00 45.49 2.74
232 233 7.044798 CGTGTACTAAGTACTCCCTAGTTAGT 58.955 42.308 10.27 8.27 46.68 2.24
233 234 6.481644 CCGTGTACTAAGTACTCCCTAGTTAG 59.518 46.154 10.27 3.13 41.51 2.34
234 235 6.349300 CCGTGTACTAAGTACTCCCTAGTTA 58.651 44.000 10.27 0.31 39.49 2.24
235 236 5.189180 CCGTGTACTAAGTACTCCCTAGTT 58.811 45.833 10.27 0.00 39.49 2.24
236 237 4.775236 CCGTGTACTAAGTACTCCCTAGT 58.225 47.826 9.96 9.96 39.49 2.57
237 238 3.563390 GCCGTGTACTAAGTACTCCCTAG 59.437 52.174 0.00 0.00 39.49 3.02
238 239 3.200825 AGCCGTGTACTAAGTACTCCCTA 59.799 47.826 0.00 0.00 39.49 3.53
349 1240 9.064602 TCAATTTACCCTCCTTTCTTATCCTAA 57.935 33.333 0.00 0.00 0.00 2.69
401 1318 2.228582 TCAACGTGGGCAAATGATGAAG 59.771 45.455 0.00 0.00 0.00 3.02
484 1404 4.864704 TGGGGAAAAGAACTTGTATTGC 57.135 40.909 0.00 0.00 0.00 3.56
485 1405 8.675705 ATTTTTGGGGAAAAGAACTTGTATTG 57.324 30.769 0.00 0.00 40.35 1.90
489 1409 9.693739 ATTAAATTTTTGGGGAAAAGAACTTGT 57.306 25.926 0.00 0.00 40.35 3.16
491 1411 9.913310 TGATTAAATTTTTGGGGAAAAGAACTT 57.087 25.926 0.00 0.00 40.35 2.66
492 1412 9.337396 GTGATTAAATTTTTGGGGAAAAGAACT 57.663 29.630 0.00 0.00 40.35 3.01
493 1413 9.114952 TGTGATTAAATTTTTGGGGAAAAGAAC 57.885 29.630 0.00 0.00 40.35 3.01
496 1416 9.506018 AGATGTGATTAAATTTTTGGGGAAAAG 57.494 29.630 0.00 0.00 40.35 2.27
532 1458 7.319646 GGTTCCTTTTGTTGAATATATGTGCA 58.680 34.615 0.00 0.00 0.00 4.57
553 1488 1.341209 CTGCAAGTTGGAAAGGGGTTC 59.659 52.381 4.75 0.00 35.28 3.62
600 7848 5.133941 TGTGTTACAAGACCCTAAATTGCA 58.866 37.500 0.00 0.00 0.00 4.08
605 7853 5.931294 TGACATGTGTTACAAGACCCTAAA 58.069 37.500 1.15 0.00 0.00 1.85
672 7935 7.387948 CCAGCATGTTACTACTAACAGAACTTT 59.612 37.037 0.00 0.00 44.36 2.66
700 7971 5.453567 AAGATGCAGTTTAGGGAAACAAC 57.546 39.130 0.00 0.00 46.30 3.32
737 8019 6.655078 AGCCTGTTCATAACAAAACAAGAT 57.345 33.333 0.00 0.00 41.61 2.40
811 8109 0.108804 TAGCTTGCAGTCTACCGCAC 60.109 55.000 0.00 0.00 38.00 5.34
852 8150 4.751767 ACTGTCCTGGCATTTTCAAAAA 57.248 36.364 0.00 0.00 0.00 1.94
858 8156 5.047092 CCAGATTAAACTGTCCTGGCATTTT 60.047 40.000 11.34 9.86 38.07 1.82
865 8163 6.409704 TCAGAATCCAGATTAAACTGTCCTG 58.590 40.000 11.34 11.28 36.30 3.86
983 8281 8.611257 TCTTCAACATTTAAAAGGGAGAGGATA 58.389 33.333 0.00 0.00 0.00 2.59
1062 8360 6.591448 CACGCAGAGATATTTCTGGCATATTA 59.409 38.462 21.27 0.00 43.80 0.98
1063 8361 5.410746 CACGCAGAGATATTTCTGGCATATT 59.589 40.000 21.27 1.08 43.80 1.28
1064 8362 4.934001 CACGCAGAGATATTTCTGGCATAT 59.066 41.667 21.27 3.92 43.80 1.78
1065 8363 4.039124 TCACGCAGAGATATTTCTGGCATA 59.961 41.667 21.27 3.68 43.80 3.14
1104 8402 2.204237 ACCAACGTAACGAACTTGGTC 58.796 47.619 15.95 0.00 41.66 4.02
1203 8501 2.105306 CAGCATGATCATCCACCTACCA 59.895 50.000 4.86 0.00 39.69 3.25
1307 8605 1.761784 GGTGCAGAGACTCCAGATCAT 59.238 52.381 0.00 0.00 0.00 2.45
1417 8715 3.812053 GAGATCAGATTTTGGATGTCCCG 59.188 47.826 0.00 0.00 37.93 5.14
1465 8763 5.418840 GGATGCCCTCAAAAGAAGTTAATGA 59.581 40.000 0.00 0.00 0.00 2.57
1466 8764 5.185635 TGGATGCCCTCAAAAGAAGTTAATG 59.814 40.000 0.00 0.00 0.00 1.90
1489 8787 8.777865 TTAGGAGATTGAATGTTTAGACAGTG 57.222 34.615 0.00 0.00 39.58 3.66
1531 8832 4.387026 TGTCTTCAAAGTCCCCATCAAT 57.613 40.909 0.00 0.00 0.00 2.57
1556 8857 4.082125 CTCCATATTAGGGGCATCCAAAC 58.918 47.826 0.00 0.00 38.24 2.93
1582 8883 2.045047 TGGGATCAAGAGAGAGAAGGGT 59.955 50.000 0.00 0.00 0.00 4.34
1629 8930 2.863704 GCTTTCCTTGTCATGCACAACC 60.864 50.000 0.00 0.00 40.29 3.77
1659 8960 2.644798 ACTTAGGCTTCCCAATGACTGT 59.355 45.455 0.00 0.00 0.00 3.55
1737 9040 6.542370 GCAGAAGAAGGCCATAGTAATGTTAA 59.458 38.462 5.01 0.00 0.00 2.01
1804 9134 4.413520 ACACCCCTTTGATAGATACTGCAT 59.586 41.667 0.00 0.00 0.00 3.96
1827 9157 2.626743 GGCAGGGAGCTTCGTAAGTATA 59.373 50.000 0.00 0.00 44.79 1.47
1893 9223 0.318441 TGAAGACTTGCCTCTGGTCG 59.682 55.000 0.00 0.00 35.42 4.79
1911 9241 3.558006 TCTGTAACAATGAACACGTGGTG 59.442 43.478 21.57 11.57 39.75 4.17
1967 9297 1.331756 GATTTACTGGAGGCATGCGTG 59.668 52.381 19.15 6.13 0.00 5.34
1971 9301 3.495806 GGAGAGGATTTACTGGAGGCATG 60.496 52.174 0.00 0.00 0.00 4.06
2013 9344 8.034804 GGTGCCTTAAATACAAGAATGAACATT 58.965 33.333 0.00 0.00 0.00 2.71
2147 9505 3.763360 CCTGGAAACATTTCATACTGGCA 59.237 43.478 6.68 0.00 41.51 4.92
2183 9541 2.837498 AGCTTTGCCACAAAATTGACC 58.163 42.857 0.00 0.00 0.00 4.02
2213 9571 2.033801 CACTTCTTCCAAAGCAGGTGTG 59.966 50.000 0.00 0.00 0.00 3.82
2214 9572 2.092429 TCACTTCTTCCAAAGCAGGTGT 60.092 45.455 0.00 0.00 0.00 4.16
2261 9619 3.153024 GGTAAGAACCATGCTGCGA 57.847 52.632 0.00 0.00 45.98 5.10
2339 9742 1.093159 GCAAAGTGATGAGGGAGCAG 58.907 55.000 0.00 0.00 0.00 4.24
2370 9773 5.741011 AGACAAAATAATTCTACCCGCAGA 58.259 37.500 0.00 0.00 0.00 4.26
2404 9811 3.914426 CCAGGTCTAGCTGGTACATTT 57.086 47.619 18.10 0.00 38.20 2.32
2479 9897 4.033358 GCTGATAGACCGAATGTTCAACAG 59.967 45.833 0.00 0.00 0.00 3.16
2484 9902 4.033358 CACTTGCTGATAGACCGAATGTTC 59.967 45.833 0.00 0.00 0.00 3.18
2582 10088 5.946942 ATGTGATCATAGACAGAACACCT 57.053 39.130 0.00 0.00 37.81 4.00
2600 10106 4.789012 ATTTGCTACAACCAGGAATGTG 57.211 40.909 11.52 4.82 0.00 3.21
2630 10145 7.186570 TCCTAAATGTGATCACTTCTCATGA 57.813 36.000 25.55 11.71 38.30 3.07
2841 10420 3.491934 GCGCATGCACGTTTACTAG 57.508 52.632 19.57 0.00 42.15 2.57
2858 10437 2.276058 GACGAAGACGCGCATTGC 60.276 61.111 5.73 0.00 43.96 3.56
2860 10439 0.666274 TTGAGACGAAGACGCGCATT 60.666 50.000 5.73 0.00 43.96 3.56
2862 10441 2.014554 GTTGAGACGAAGACGCGCA 61.015 57.895 5.73 0.00 43.96 6.09
2863 10442 2.717809 GGTTGAGACGAAGACGCGC 61.718 63.158 5.73 0.00 43.96 6.86
2864 10443 0.937699 TTGGTTGAGACGAAGACGCG 60.938 55.000 3.53 3.53 43.96 6.01
2865 10444 1.429463 ATTGGTTGAGACGAAGACGC 58.571 50.000 0.00 0.00 43.96 5.19
2866 10445 5.817988 TCTATATTGGTTGAGACGAAGACG 58.182 41.667 0.00 0.00 45.75 4.18
2867 10446 7.921214 TGAATCTATATTGGTTGAGACGAAGAC 59.079 37.037 0.00 0.00 0.00 3.01
2868 10447 8.007405 TGAATCTATATTGGTTGAGACGAAGA 57.993 34.615 0.00 0.00 0.00 2.87
2870 10449 8.038351 TGTTGAATCTATATTGGTTGAGACGAA 58.962 33.333 0.00 0.00 0.00 3.85
2871 10450 7.552459 TGTTGAATCTATATTGGTTGAGACGA 58.448 34.615 0.00 0.00 0.00 4.20
2882 10461 9.369904 GCCATGTGTTTTTGTTGAATCTATATT 57.630 29.630 0.00 0.00 0.00 1.28
2884 10463 7.890515 TGCCATGTGTTTTTGTTGAATCTATA 58.109 30.769 0.00 0.00 0.00 1.31
2885 10464 6.757237 TGCCATGTGTTTTTGTTGAATCTAT 58.243 32.000 0.00 0.00 0.00 1.98
2886 10465 6.154203 TGCCATGTGTTTTTGTTGAATCTA 57.846 33.333 0.00 0.00 0.00 1.98
2887 10466 5.021033 TGCCATGTGTTTTTGTTGAATCT 57.979 34.783 0.00 0.00 0.00 2.40
2888 10467 5.334260 CCATGCCATGTGTTTTTGTTGAATC 60.334 40.000 3.63 0.00 0.00 2.52
2889 10468 4.515944 CCATGCCATGTGTTTTTGTTGAAT 59.484 37.500 3.63 0.00 0.00 2.57
2890 10469 3.875727 CCATGCCATGTGTTTTTGTTGAA 59.124 39.130 3.63 0.00 0.00 2.69
2891 10470 3.464907 CCATGCCATGTGTTTTTGTTGA 58.535 40.909 3.63 0.00 0.00 3.18
2893 10472 2.220313 GCCATGCCATGTGTTTTTGTT 58.780 42.857 3.63 0.00 0.00 2.83
2894 10473 1.140452 TGCCATGCCATGTGTTTTTGT 59.860 42.857 3.63 0.00 0.00 2.83
2895 10474 1.801771 CTGCCATGCCATGTGTTTTTG 59.198 47.619 3.63 0.00 0.00 2.44
2896 10475 1.417145 ACTGCCATGCCATGTGTTTTT 59.583 42.857 3.63 0.00 0.00 1.94
2897 10476 1.050204 ACTGCCATGCCATGTGTTTT 58.950 45.000 3.63 0.00 0.00 2.43
2898 10477 1.050204 AACTGCCATGCCATGTGTTT 58.950 45.000 3.63 0.00 0.00 2.83
2899 10478 0.319083 CAACTGCCATGCCATGTGTT 59.681 50.000 3.63 3.41 0.00 3.32
2900 10479 0.540133 TCAACTGCCATGCCATGTGT 60.540 50.000 3.63 0.00 0.00 3.72
2902 10481 2.440517 TATCAACTGCCATGCCATGT 57.559 45.000 3.63 0.00 0.00 3.21
2903 10482 5.654603 ATATTATCAACTGCCATGCCATG 57.345 39.130 0.00 0.00 0.00 3.66
2907 10486 9.956720 GGATAATAATATTATCAACTGCCATGC 57.043 33.333 25.58 8.30 34.06 4.06
2928 10689 6.442541 TTGTGTGGAAAAGACTAGGGATAA 57.557 37.500 0.00 0.00 0.00 1.75
2930 10691 4.993705 TTGTGTGGAAAAGACTAGGGAT 57.006 40.909 0.00 0.00 0.00 3.85
2932 10693 6.049955 TCTATTGTGTGGAAAAGACTAGGG 57.950 41.667 0.00 0.00 0.00 3.53
2933 10694 7.824289 TCATTCTATTGTGTGGAAAAGACTAGG 59.176 37.037 0.00 0.00 30.60 3.02
2936 10697 8.517878 CAATCATTCTATTGTGTGGAAAAGACT 58.482 33.333 0.00 0.00 33.11 3.24
2937 10698 8.299570 ACAATCATTCTATTGTGTGGAAAAGAC 58.700 33.333 1.63 0.00 45.90 3.01
2938 10699 8.408043 ACAATCATTCTATTGTGTGGAAAAGA 57.592 30.769 1.63 0.00 45.90 2.52
2949 10710 7.741027 ATGCTACTGGACAATCATTCTATTG 57.259 36.000 0.00 0.00 41.65 1.90
2950 10711 8.874156 TCTATGCTACTGGACAATCATTCTATT 58.126 33.333 0.00 0.00 0.00 1.73
2951 10712 8.310382 GTCTATGCTACTGGACAATCATTCTAT 58.690 37.037 0.00 0.00 0.00 1.98
2953 10714 6.098838 TGTCTATGCTACTGGACAATCATTCT 59.901 38.462 0.00 0.00 36.04 2.40
2954 10715 6.283694 TGTCTATGCTACTGGACAATCATTC 58.716 40.000 0.00 0.00 36.04 2.67
2956 10717 5.876651 TGTCTATGCTACTGGACAATCAT 57.123 39.130 0.00 0.00 36.04 2.45
2958 10719 6.371548 TGTTTTGTCTATGCTACTGGACAATC 59.628 38.462 11.83 9.72 44.51 2.67
2959 10720 6.237901 TGTTTTGTCTATGCTACTGGACAAT 58.762 36.000 11.83 0.00 44.51 2.71
2960 10721 5.616270 TGTTTTGTCTATGCTACTGGACAA 58.384 37.500 8.54 8.54 43.81 3.18
2963 10724 5.580691 CGAATGTTTTGTCTATGCTACTGGA 59.419 40.000 0.00 0.00 0.00 3.86
2964 10725 5.351465 ACGAATGTTTTGTCTATGCTACTGG 59.649 40.000 0.00 0.00 0.00 4.00
2966 10727 5.351465 CCACGAATGTTTTGTCTATGCTACT 59.649 40.000 0.00 0.00 0.00 2.57
2967 10728 5.447279 CCCACGAATGTTTTGTCTATGCTAC 60.447 44.000 0.00 0.00 0.00 3.58
2968 10729 4.634004 CCCACGAATGTTTTGTCTATGCTA 59.366 41.667 0.00 0.00 0.00 3.49
2969 10730 3.440173 CCCACGAATGTTTTGTCTATGCT 59.560 43.478 0.00 0.00 0.00 3.79
2970 10731 3.190535 ACCCACGAATGTTTTGTCTATGC 59.809 43.478 0.00 0.00 0.00 3.14
2971 10732 5.410132 TGTACCCACGAATGTTTTGTCTATG 59.590 40.000 0.00 0.00 0.00 2.23
2973 10734 4.958509 TGTACCCACGAATGTTTTGTCTA 58.041 39.130 0.00 0.00 0.00 2.59
2974 10735 3.811083 TGTACCCACGAATGTTTTGTCT 58.189 40.909 0.00 0.00 0.00 3.41
2975 10736 4.555348 TTGTACCCACGAATGTTTTGTC 57.445 40.909 0.00 0.00 0.00 3.18
2976 10737 4.399934 AGTTTGTACCCACGAATGTTTTGT 59.600 37.500 0.00 0.00 30.66 2.83
2977 10738 4.927422 AGTTTGTACCCACGAATGTTTTG 58.073 39.130 0.00 0.00 30.66 2.44
2980 10741 5.125739 TGAAAAGTTTGTACCCACGAATGTT 59.874 36.000 0.00 0.00 30.66 2.71
2981 10742 4.641094 TGAAAAGTTTGTACCCACGAATGT 59.359 37.500 0.00 0.00 30.66 2.71
2982 10743 5.176407 TGAAAAGTTTGTACCCACGAATG 57.824 39.130 0.00 0.00 30.66 2.67
2985 10746 7.228906 TGAATATTGAAAAGTTTGTACCCACGA 59.771 33.333 0.00 0.00 0.00 4.35
2986 10747 7.364200 TGAATATTGAAAAGTTTGTACCCACG 58.636 34.615 0.00 0.00 0.00 4.94
3037 10798 8.635877 TGTTTAAACAATGTTCATGGTGTAAC 57.364 30.769 18.54 4.82 35.67 2.50
3038 10799 9.823647 AATGTTTAAACAATGTTCATGGTGTAA 57.176 25.926 23.97 0.29 43.03 2.41
3040 10801 9.995003 ATAATGTTTAAACAATGTTCATGGTGT 57.005 25.926 23.97 0.97 43.03 4.16
3081 10842 9.569122 GGTTGGTATTAATTCATAAGAGGCTAA 57.431 33.333 0.00 0.00 0.00 3.09
3082 10843 8.945193 AGGTTGGTATTAATTCATAAGAGGCTA 58.055 33.333 0.00 0.00 0.00 3.93
3083 10844 7.816411 AGGTTGGTATTAATTCATAAGAGGCT 58.184 34.615 0.00 0.00 0.00 4.58
3084 10845 8.352942 CAAGGTTGGTATTAATTCATAAGAGGC 58.647 37.037 0.00 0.00 0.00 4.70
3085 10846 9.627123 TCAAGGTTGGTATTAATTCATAAGAGG 57.373 33.333 0.00 0.00 0.00 3.69
3092 10853 9.703892 CACAATTTCAAGGTTGGTATTAATTCA 57.296 29.630 0.00 0.00 0.00 2.57
3093 10854 8.655970 GCACAATTTCAAGGTTGGTATTAATTC 58.344 33.333 0.00 0.00 0.00 2.17
3094 10855 8.374743 AGCACAATTTCAAGGTTGGTATTAATT 58.625 29.630 0.00 0.00 0.00 1.40
3095 10856 7.906327 AGCACAATTTCAAGGTTGGTATTAAT 58.094 30.769 0.00 0.00 0.00 1.40
3096 10857 7.296628 AGCACAATTTCAAGGTTGGTATTAA 57.703 32.000 0.00 0.00 0.00 1.40
3097 10858 6.909550 AGCACAATTTCAAGGTTGGTATTA 57.090 33.333 0.00 0.00 0.00 0.98
3098 10859 5.806654 AGCACAATTTCAAGGTTGGTATT 57.193 34.783 0.00 0.00 0.00 1.89
3099 10860 6.295067 GGTTAGCACAATTTCAAGGTTGGTAT 60.295 38.462 0.00 0.00 0.00 2.73
3100 10861 5.010213 GGTTAGCACAATTTCAAGGTTGGTA 59.990 40.000 0.00 0.00 0.00 3.25
3101 10862 4.202212 GGTTAGCACAATTTCAAGGTTGGT 60.202 41.667 0.00 0.00 0.00 3.67
3102 10863 4.306600 GGTTAGCACAATTTCAAGGTTGG 58.693 43.478 0.00 0.00 0.00 3.77
3103 10864 4.202202 TGGGTTAGCACAATTTCAAGGTTG 60.202 41.667 0.00 0.00 0.00 3.77
3104 10865 3.964031 TGGGTTAGCACAATTTCAAGGTT 59.036 39.130 0.00 0.00 0.00 3.50
3105 10866 3.571590 TGGGTTAGCACAATTTCAAGGT 58.428 40.909 0.00 0.00 0.00 3.50
3106 10867 3.826157 TCTGGGTTAGCACAATTTCAAGG 59.174 43.478 0.00 0.00 0.00 3.61
3107 10868 5.452078 TTCTGGGTTAGCACAATTTCAAG 57.548 39.130 0.00 0.00 0.00 3.02
3108 10869 7.450014 TCTTATTCTGGGTTAGCACAATTTCAA 59.550 33.333 0.00 0.00 0.00 2.69
3109 10870 6.945435 TCTTATTCTGGGTTAGCACAATTTCA 59.055 34.615 0.00 0.00 0.00 2.69
3110 10871 7.391148 TCTTATTCTGGGTTAGCACAATTTC 57.609 36.000 0.00 0.00 0.00 2.17
3111 10872 7.775053 TTCTTATTCTGGGTTAGCACAATTT 57.225 32.000 0.00 0.00 0.00 1.82
3112 10873 7.775053 TTTCTTATTCTGGGTTAGCACAATT 57.225 32.000 0.00 0.00 0.00 2.32
3113 10874 7.451566 AGTTTTCTTATTCTGGGTTAGCACAAT 59.548 33.333 0.00 0.00 0.00 2.71
3114 10875 6.775629 AGTTTTCTTATTCTGGGTTAGCACAA 59.224 34.615 0.00 0.00 0.00 3.33
3115 10876 6.303839 AGTTTTCTTATTCTGGGTTAGCACA 58.696 36.000 0.00 0.00 0.00 4.57
3116 10877 6.819397 AGTTTTCTTATTCTGGGTTAGCAC 57.181 37.500 0.00 0.00 0.00 4.40
3117 10878 7.255801 CCAAAGTTTTCTTATTCTGGGTTAGCA 60.256 37.037 0.00 0.00 39.48 3.49
3118 10879 7.090808 CCAAAGTTTTCTTATTCTGGGTTAGC 58.909 38.462 0.00 0.00 39.48 3.09
3119 10880 8.178313 ACCAAAGTTTTCTTATTCTGGGTTAG 57.822 34.615 0.00 0.00 39.48 2.34
3120 10881 9.816787 ATACCAAAGTTTTCTTATTCTGGGTTA 57.183 29.630 0.00 0.00 39.48 2.85
3121 10882 8.721133 ATACCAAAGTTTTCTTATTCTGGGTT 57.279 30.769 0.00 0.00 39.48 4.11
3122 10883 8.721133 AATACCAAAGTTTTCTTATTCTGGGT 57.279 30.769 0.00 0.00 39.48 4.51
3123 10884 9.996554 AAAATACCAAAGTTTTCTTATTCTGGG 57.003 29.630 0.00 0.00 39.48 4.45
3142 10903 9.442047 CCCATCATGATCTAGTTCTAAAATACC 57.558 37.037 4.86 0.00 0.00 2.73
3143 10904 8.940952 GCCCATCATGATCTAGTTCTAAAATAC 58.059 37.037 4.86 0.00 0.00 1.89
3144 10905 8.659527 TGCCCATCATGATCTAGTTCTAAAATA 58.340 33.333 4.86 0.00 0.00 1.40
3145 10906 7.446625 GTGCCCATCATGATCTAGTTCTAAAAT 59.553 37.037 4.86 0.00 0.00 1.82
3146 10907 6.767902 GTGCCCATCATGATCTAGTTCTAAAA 59.232 38.462 4.86 0.00 0.00 1.52
3147 10908 6.291377 GTGCCCATCATGATCTAGTTCTAAA 58.709 40.000 4.86 0.00 0.00 1.85
3148 10909 5.509670 CGTGCCCATCATGATCTAGTTCTAA 60.510 44.000 4.86 0.00 33.49 2.10
3149 10910 4.021981 CGTGCCCATCATGATCTAGTTCTA 60.022 45.833 4.86 0.00 33.49 2.10
3150 10911 3.244009 CGTGCCCATCATGATCTAGTTCT 60.244 47.826 4.86 0.00 33.49 3.01
3151 10912 3.062763 CGTGCCCATCATGATCTAGTTC 58.937 50.000 4.86 0.00 33.49 3.01
3152 10913 2.808202 GCGTGCCCATCATGATCTAGTT 60.808 50.000 4.86 0.00 33.49 2.24
3153 10914 1.270518 GCGTGCCCATCATGATCTAGT 60.271 52.381 4.86 0.00 33.49 2.57
3154 10915 1.436600 GCGTGCCCATCATGATCTAG 58.563 55.000 4.86 0.00 33.49 2.43
3155 10916 0.319813 CGCGTGCCCATCATGATCTA 60.320 55.000 4.86 0.00 33.49 1.98
3156 10917 1.596203 CGCGTGCCCATCATGATCT 60.596 57.895 4.86 0.00 33.49 2.75
3157 10918 1.439353 AACGCGTGCCCATCATGATC 61.439 55.000 14.98 0.00 33.49 2.92
3158 10919 1.031571 AAACGCGTGCCCATCATGAT 61.032 50.000 14.98 1.18 33.49 2.45
3159 10920 1.240641 AAAACGCGTGCCCATCATGA 61.241 50.000 14.98 0.00 33.49 3.07
3160 10921 0.798009 GAAAACGCGTGCCCATCATG 60.798 55.000 14.98 0.00 34.80 3.07
3161 10922 1.506262 GAAAACGCGTGCCCATCAT 59.494 52.632 14.98 0.00 0.00 2.45
3162 10923 2.950673 GAAAACGCGTGCCCATCA 59.049 55.556 14.98 0.00 0.00 3.07
3163 10924 2.202298 CGAAAACGCGTGCCCATC 60.202 61.111 14.98 6.22 0.00 3.51
3164 10925 2.975799 ACGAAAACGCGTGCCCAT 60.976 55.556 14.98 0.00 43.79 4.00
3171 10932 4.712873 GACGGCCACGAAAACGCG 62.713 66.667 3.53 3.53 44.60 6.01
3172 10933 1.356527 ATAGACGGCCACGAAAACGC 61.357 55.000 2.24 0.00 44.60 4.84
3173 10934 1.073177 AATAGACGGCCACGAAAACG 58.927 50.000 2.24 0.00 44.60 3.60
3174 10935 2.224784 ACAAATAGACGGCCACGAAAAC 59.775 45.455 2.24 0.00 44.60 2.43
3175 10936 2.496111 ACAAATAGACGGCCACGAAAA 58.504 42.857 2.24 0.00 44.60 2.29
3176 10937 2.172851 ACAAATAGACGGCCACGAAA 57.827 45.000 2.24 0.00 44.60 3.46
3177 10938 2.609350 GTACAAATAGACGGCCACGAA 58.391 47.619 2.24 0.00 44.60 3.85
3178 10939 1.467883 CGTACAAATAGACGGCCACGA 60.468 52.381 2.24 0.00 44.60 4.35
3185 10946 9.979270 CCTACTATATTACCGTACAAATAGACG 57.021 37.037 0.00 0.00 38.79 4.18
3192 10953 8.850156 GGAAACTCCTACTATATTACCGTACAA 58.150 37.037 0.00 0.00 32.53 2.41
3193 10954 7.998383 TGGAAACTCCTACTATATTACCGTACA 59.002 37.037 0.00 0.00 37.46 2.90
3194 10955 8.293157 GTGGAAACTCCTACTATATTACCGTAC 58.707 40.741 0.00 0.00 37.46 3.67
3195 10956 7.998383 TGTGGAAACTCCTACTATATTACCGTA 59.002 37.037 0.00 0.00 37.46 4.02
3196 10957 6.835488 TGTGGAAACTCCTACTATATTACCGT 59.165 38.462 0.00 0.00 37.46 4.83
3197 10958 7.281040 TGTGGAAACTCCTACTATATTACCG 57.719 40.000 0.00 0.00 37.46 4.02
3204 10965 8.768397 TGATGTATTTGTGGAAACTCCTACTAT 58.232 33.333 0.00 0.00 37.46 2.12
3205 10966 8.141298 TGATGTATTTGTGGAAACTCCTACTA 57.859 34.615 0.00 0.00 37.46 1.82
3206 10967 7.016153 TGATGTATTTGTGGAAACTCCTACT 57.984 36.000 0.00 0.00 37.46 2.57
3207 10968 7.681939 TTGATGTATTTGTGGAAACTCCTAC 57.318 36.000 0.00 0.00 37.46 3.18
3208 10969 7.888021 ACATTGATGTATTTGTGGAAACTCCTA 59.112 33.333 0.00 0.00 39.68 2.94
3209 10970 6.721208 ACATTGATGTATTTGTGGAAACTCCT 59.279 34.615 0.00 0.00 39.68 3.69
3210 10971 6.924111 ACATTGATGTATTTGTGGAAACTCC 58.076 36.000 0.00 0.00 39.68 3.85
3297 11058 8.598041 GGAGGGAGTATCACATTTGTATAATCT 58.402 37.037 0.00 0.00 45.06 2.40
3298 11059 8.598041 AGGAGGGAGTATCACATTTGTATAATC 58.402 37.037 0.00 0.00 45.06 1.75
3299 11060 8.511748 AGGAGGGAGTATCACATTTGTATAAT 57.488 34.615 0.00 0.00 45.06 1.28
3300 11061 7.931015 AGGAGGGAGTATCACATTTGTATAA 57.069 36.000 0.00 0.00 45.06 0.98
3301 11062 7.016268 GGAAGGAGGGAGTATCACATTTGTATA 59.984 40.741 0.00 0.00 45.06 1.47
3302 11063 6.183361 GGAAGGAGGGAGTATCACATTTGTAT 60.183 42.308 0.00 0.00 45.06 2.29
3303 11064 5.130477 GGAAGGAGGGAGTATCACATTTGTA 59.870 44.000 0.00 0.00 45.06 2.41
3304 11065 4.080299 GGAAGGAGGGAGTATCACATTTGT 60.080 45.833 0.00 0.00 45.06 2.83
3305 11066 4.455606 GGAAGGAGGGAGTATCACATTTG 58.544 47.826 0.00 0.00 45.06 2.32
3306 11067 3.459969 GGGAAGGAGGGAGTATCACATTT 59.540 47.826 0.00 0.00 45.06 2.32
3307 11068 3.049344 GGGAAGGAGGGAGTATCACATT 58.951 50.000 0.00 0.00 45.06 2.71
3308 11069 2.022035 TGGGAAGGAGGGAGTATCACAT 60.022 50.000 0.00 0.00 45.06 3.21
3309 11070 1.364678 TGGGAAGGAGGGAGTATCACA 59.635 52.381 0.00 0.00 45.06 3.58
3310 11071 2.176247 TGGGAAGGAGGGAGTATCAC 57.824 55.000 0.00 0.00 40.51 3.06
3311 11072 2.961536 TTGGGAAGGAGGGAGTATCA 57.038 50.000 0.00 0.00 36.25 2.15
3312 11073 4.797912 ATTTTGGGAAGGAGGGAGTATC 57.202 45.455 0.00 0.00 0.00 2.24


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.