Multiple sequence alignment - TraesCS3A01G515100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G515100 chr3A 100.000 4054 0 0 1 4054 733472655 733476708 0.000000e+00 7487
1 TraesCS3A01G515100 chr3A 85.057 1218 140 26 2 1193 733917419 733916218 0.000000e+00 1203
2 TraesCS3A01G515100 chr3A 85.129 1197 148 14 15 1188 733725790 733724601 0.000000e+00 1197
3 TraesCS3A01G515100 chr3A 84.571 1225 158 19 2 1201 733860078 733858860 0.000000e+00 1186
4 TraesCS3A01G515100 chr3A 82.989 1211 176 15 2 1188 733436446 733437650 0.000000e+00 1068
5 TraesCS3A01G515100 chr3A 82.673 1212 180 13 2 1188 733333344 733334550 0.000000e+00 1048
6 TraesCS3A01G515100 chr3A 79.555 944 148 21 270 1188 733185900 733186823 2.060000e-177 632
7 TraesCS3A01G515100 chr3A 85.000 420 52 6 2807 3226 733724551 733724143 2.250000e-112 416
8 TraesCS3A01G515100 chr6B 94.568 1344 65 8 1410 2750 77801291 77802629 0.000000e+00 2071
9 TraesCS3A01G515100 chr3D 93.759 1346 66 6 1410 2752 508063764 508062434 0.000000e+00 2004
10 TraesCS3A01G515100 chr3D 92.666 1159 52 4 1 1135 603948497 603949646 0.000000e+00 1639
11 TraesCS3A01G515100 chr3D 94.444 918 46 5 2748 3663 603949675 603950589 0.000000e+00 1408
12 TraesCS3A01G515100 chr3D 84.793 1210 148 15 2 1187 603962904 603964101 0.000000e+00 1182
13 TraesCS3A01G515100 chr3D 84.576 1167 153 14 2 1146 604252749 604251588 0.000000e+00 1133
14 TraesCS3A01G515100 chr3D 83.754 1188 167 14 2 1166 602781416 602780232 0.000000e+00 1101
15 TraesCS3A01G515100 chr3D 84.298 1140 155 17 55 1177 604143575 604142443 0.000000e+00 1092
16 TraesCS3A01G515100 chr3D 82.864 1243 155 32 2 1201 604288234 604287007 0.000000e+00 1062
17 TraesCS3A01G515100 chr3D 94.359 390 18 1 3665 4054 603958453 603958838 2.700000e-166 595
18 TraesCS3A01G515100 chr3D 88.402 388 39 3 2773 3160 604136170 604135789 2.850000e-126 462
19 TraesCS3A01G515100 chr3D 85.360 444 50 5 2770 3213 604142411 604141983 2.870000e-121 446
20 TraesCS3A01G515100 chr3D 84.309 427 56 5 2807 3230 604251495 604251077 1.360000e-109 407
21 TraesCS3A01G515100 chr3D 97.674 43 1 0 1160 1202 603949645 603949687 1.560000e-09 75
22 TraesCS3A01G515100 chr7A 93.457 1345 81 6 1410 2749 174925857 174924515 0.000000e+00 1989
23 TraesCS3A01G515100 chr7A 93.018 1332 87 6 1410 2738 642992035 642993363 0.000000e+00 1940
24 TraesCS3A01G515100 chr7B 93.443 1342 78 8 1410 2749 695708773 695710106 0.000000e+00 1982
25 TraesCS3A01G515100 chr7B 95.714 70 3 0 1409 1478 740001330 740001399 3.310000e-21 113
26 TraesCS3A01G515100 chr3B 93.049 1338 87 6 1413 2748 596974764 596973431 0.000000e+00 1951
27 TraesCS3A01G515100 chr3B 84.520 1208 156 16 1 1187 811079597 811080794 0.000000e+00 1166
28 TraesCS3A01G515100 chr3B 83.485 1211 171 16 2 1188 810970550 810971755 0.000000e+00 1101
29 TraesCS3A01G515100 chr3B 83.207 1185 163 18 2 1166 810952692 810953860 0.000000e+00 1053
30 TraesCS3A01G515100 chr3B 82.440 1213 181 19 2 1188 810978098 810979304 0.000000e+00 1031
31 TraesCS3A01G515100 chr3B 82.659 1211 163 25 2 1188 811040956 811042143 0.000000e+00 1029
32 TraesCS3A01G515100 chr3B 93.382 680 37 5 3377 4054 811063999 811064672 0.000000e+00 1000
33 TraesCS3A01G515100 chr3B 94.146 632 37 0 2748 3379 811054852 811055483 0.000000e+00 963
34 TraesCS3A01G515100 chr3B 88.144 388 46 0 2773 3160 811127201 811126814 2.850000e-126 462
35 TraesCS3A01G515100 chr3B 85.377 424 54 4 2807 3230 811139880 811139465 2.240000e-117 433
36 TraesCS3A01G515100 chr3B 92.500 240 18 0 896 1135 811054584 811054823 1.080000e-90 344
37 TraesCS3A01G515100 chr2A 92.474 1342 89 8 1410 2748 760859827 760858495 0.000000e+00 1908
38 TraesCS3A01G515100 chr5D 93.101 1290 78 9 1471 2750 428472171 428470883 0.000000e+00 1879
39 TraesCS3A01G515100 chr5D 91.757 1286 95 10 1471 2749 205118123 205116842 0.000000e+00 1777
40 TraesCS3A01G515100 chrUn 85.185 432 50 7 2770 3200 42261526 42261944 8.050000e-117 431
41 TraesCS3A01G515100 chrUn 76.683 416 68 14 3294 3698 42262391 42262788 1.910000e-48 204
42 TraesCS3A01G515100 chr2D 91.943 211 16 1 1204 1413 518581825 518581615 1.100000e-75 294


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G515100 chr3A 733472655 733476708 4053 False 7487.000000 7487 100.0000 1 4054 1 chr3A.!!$F4 4053
1 TraesCS3A01G515100 chr3A 733916218 733917419 1201 True 1203.000000 1203 85.0570 2 1193 1 chr3A.!!$R2 1191
2 TraesCS3A01G515100 chr3A 733858860 733860078 1218 True 1186.000000 1186 84.5710 2 1201 1 chr3A.!!$R1 1199
3 TraesCS3A01G515100 chr3A 733436446 733437650 1204 False 1068.000000 1068 82.9890 2 1188 1 chr3A.!!$F3 1186
4 TraesCS3A01G515100 chr3A 733333344 733334550 1206 False 1048.000000 1048 82.6730 2 1188 1 chr3A.!!$F2 1186
5 TraesCS3A01G515100 chr3A 733724143 733725790 1647 True 806.500000 1197 85.0645 15 3226 2 chr3A.!!$R3 3211
6 TraesCS3A01G515100 chr3A 733185900 733186823 923 False 632.000000 632 79.5550 270 1188 1 chr3A.!!$F1 918
7 TraesCS3A01G515100 chr6B 77801291 77802629 1338 False 2071.000000 2071 94.5680 1410 2750 1 chr6B.!!$F1 1340
8 TraesCS3A01G515100 chr3D 508062434 508063764 1330 True 2004.000000 2004 93.7590 1410 2752 1 chr3D.!!$R1 1342
9 TraesCS3A01G515100 chr3D 603962904 603964101 1197 False 1182.000000 1182 84.7930 2 1187 1 chr3D.!!$F2 1185
10 TraesCS3A01G515100 chr3D 602780232 602781416 1184 True 1101.000000 1101 83.7540 2 1166 1 chr3D.!!$R2 1164
11 TraesCS3A01G515100 chr3D 604287007 604288234 1227 True 1062.000000 1062 82.8640 2 1201 1 chr3D.!!$R4 1199
12 TraesCS3A01G515100 chr3D 603948497 603950589 2092 False 1040.666667 1639 94.9280 1 3663 3 chr3D.!!$F3 3662
13 TraesCS3A01G515100 chr3D 604251077 604252749 1672 True 770.000000 1133 84.4425 2 3230 2 chr3D.!!$R6 3228
14 TraesCS3A01G515100 chr3D 604141983 604143575 1592 True 769.000000 1092 84.8290 55 3213 2 chr3D.!!$R5 3158
15 TraesCS3A01G515100 chr7A 174924515 174925857 1342 True 1989.000000 1989 93.4570 1410 2749 1 chr7A.!!$R1 1339
16 TraesCS3A01G515100 chr7A 642992035 642993363 1328 False 1940.000000 1940 93.0180 1410 2738 1 chr7A.!!$F1 1328
17 TraesCS3A01G515100 chr7B 695708773 695710106 1333 False 1982.000000 1982 93.4430 1410 2749 1 chr7B.!!$F1 1339
18 TraesCS3A01G515100 chr3B 596973431 596974764 1333 True 1951.000000 1951 93.0490 1413 2748 1 chr3B.!!$R1 1335
19 TraesCS3A01G515100 chr3B 811079597 811080794 1197 False 1166.000000 1166 84.5200 1 1187 1 chr3B.!!$F6 1186
20 TraesCS3A01G515100 chr3B 810970550 810971755 1205 False 1101.000000 1101 83.4850 2 1188 1 chr3B.!!$F2 1186
21 TraesCS3A01G515100 chr3B 810952692 810953860 1168 False 1053.000000 1053 83.2070 2 1166 1 chr3B.!!$F1 1164
22 TraesCS3A01G515100 chr3B 810978098 810979304 1206 False 1031.000000 1031 82.4400 2 1188 1 chr3B.!!$F3 1186
23 TraesCS3A01G515100 chr3B 811040956 811042143 1187 False 1029.000000 1029 82.6590 2 1188 1 chr3B.!!$F4 1186
24 TraesCS3A01G515100 chr3B 811063999 811064672 673 False 1000.000000 1000 93.3820 3377 4054 1 chr3B.!!$F5 677
25 TraesCS3A01G515100 chr3B 811054584 811055483 899 False 653.500000 963 93.3230 896 3379 2 chr3B.!!$F7 2483
26 TraesCS3A01G515100 chr2A 760858495 760859827 1332 True 1908.000000 1908 92.4740 1410 2748 1 chr2A.!!$R1 1338
27 TraesCS3A01G515100 chr5D 428470883 428472171 1288 True 1879.000000 1879 93.1010 1471 2750 1 chr5D.!!$R2 1279
28 TraesCS3A01G515100 chr5D 205116842 205118123 1281 True 1777.000000 1777 91.7570 1471 2749 1 chr5D.!!$R1 1278
29 TraesCS3A01G515100 chrUn 42261526 42262788 1262 False 317.500000 431 80.9340 2770 3698 2 chrUn.!!$F1 928

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
254 259 2.979401 GAGATATCTCTGCGCGAAGA 57.021 50.0 23.06 17.74 39.81 2.87 F
1217 1314 0.112995 TGAGGAGTTTGCAGCCCAAT 59.887 50.0 0.00 0.00 32.49 3.16 F
2097 2199 0.104304 ACTGCGGTGTCGTTTCTCTT 59.896 50.0 0.00 0.00 38.89 2.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1396 1493 0.108424 GGCAGATTGACGAGCAGAGT 60.108 55.0 0.00 0.0 0.00 3.24 R
2324 2426 0.526211 AATAGCTGAGCACGTCACGA 59.474 50.0 2.91 0.0 0.00 4.35 R
3938 4435 0.522180 ATCGTGTGAGACCGAGTGTC 59.478 55.0 0.00 0.0 44.82 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
64 65 6.238022 GCTTAATCTGGATTTTGAAGCAATGC 60.238 38.462 17.37 0.00 38.65 3.56
111 112 3.579709 AGCTACATCTGTTGTGAGTTCG 58.420 45.455 1.71 0.00 39.48 3.95
180 181 3.004734 CCCGTTTGAATGTTGAAGAAGCT 59.995 43.478 0.00 0.00 0.00 3.74
200 201 4.717280 AGCTGTTAGGACTAGCACCTTATT 59.283 41.667 13.17 0.00 39.84 1.40
254 259 2.979401 GAGATATCTCTGCGCGAAGA 57.021 50.000 23.06 17.74 39.81 2.87
473 478 5.201713 TCATACCTCTTTTCTATCGGCAG 57.798 43.478 0.00 0.00 0.00 4.85
858 899 3.996480 ACACTTTCAGTTAGTGGCTCTC 58.004 45.455 7.78 0.00 45.67 3.20
861 902 4.688413 CACTTTCAGTTAGTGGCTCTCTTC 59.312 45.833 0.00 0.00 39.42 2.87
909 950 3.567164 CCAGCATTACTATGGCCTTCTTG 59.433 47.826 3.32 0.00 32.15 3.02
952 1044 7.995463 TGTTACCATTTCCTTTTTCTTTTCG 57.005 32.000 0.00 0.00 0.00 3.46
1057 1149 2.238521 GCATTTGGGACCAGAGACAAA 58.761 47.619 0.00 0.00 37.25 2.83
1169 1263 3.244422 GCTCGGTCACCCAATCCATATTA 60.244 47.826 0.00 0.00 0.00 0.98
1201 1298 3.536956 TTACGGCTAATGGGTTCTGAG 57.463 47.619 0.00 0.00 0.00 3.35
1202 1299 0.541863 ACGGCTAATGGGTTCTGAGG 59.458 55.000 0.00 0.00 0.00 3.86
1203 1300 0.830648 CGGCTAATGGGTTCTGAGGA 59.169 55.000 0.00 0.00 0.00 3.71
1204 1301 1.202580 CGGCTAATGGGTTCTGAGGAG 60.203 57.143 0.00 0.00 0.00 3.69
1205 1302 1.840635 GGCTAATGGGTTCTGAGGAGT 59.159 52.381 0.00 0.00 0.00 3.85
1206 1303 2.239907 GGCTAATGGGTTCTGAGGAGTT 59.760 50.000 0.00 0.00 0.00 3.01
1207 1304 3.308473 GGCTAATGGGTTCTGAGGAGTTT 60.308 47.826 0.00 0.00 0.00 2.66
1208 1305 3.691609 GCTAATGGGTTCTGAGGAGTTTG 59.308 47.826 0.00 0.00 0.00 2.93
1209 1306 2.206576 ATGGGTTCTGAGGAGTTTGC 57.793 50.000 0.00 0.00 0.00 3.68
1210 1307 0.843309 TGGGTTCTGAGGAGTTTGCA 59.157 50.000 0.00 0.00 0.00 4.08
1211 1308 1.202806 TGGGTTCTGAGGAGTTTGCAG 60.203 52.381 0.00 0.00 0.00 4.41
1212 1309 0.877743 GGTTCTGAGGAGTTTGCAGC 59.122 55.000 0.00 0.00 0.00 5.25
1213 1310 0.877743 GTTCTGAGGAGTTTGCAGCC 59.122 55.000 0.00 0.00 0.00 4.85
1214 1311 0.250901 TTCTGAGGAGTTTGCAGCCC 60.251 55.000 0.00 0.00 0.00 5.19
1215 1312 1.073722 CTGAGGAGTTTGCAGCCCA 59.926 57.895 0.00 0.00 0.00 5.36
1216 1313 0.538057 CTGAGGAGTTTGCAGCCCAA 60.538 55.000 0.00 0.00 0.00 4.12
1217 1314 0.112995 TGAGGAGTTTGCAGCCCAAT 59.887 50.000 0.00 0.00 32.49 3.16
1218 1315 0.813821 GAGGAGTTTGCAGCCCAATC 59.186 55.000 0.00 0.00 32.49 2.67
1219 1316 0.407139 AGGAGTTTGCAGCCCAATCT 59.593 50.000 0.00 0.00 36.45 2.40
1220 1317 0.529378 GGAGTTTGCAGCCCAATCTG 59.471 55.000 3.75 0.00 34.46 2.90
1221 1318 1.538047 GAGTTTGCAGCCCAATCTGA 58.462 50.000 3.75 0.00 34.46 3.27
1222 1319 2.097825 GAGTTTGCAGCCCAATCTGAT 58.902 47.619 3.75 0.00 34.46 2.90
1223 1320 2.097825 AGTTTGCAGCCCAATCTGATC 58.902 47.619 0.00 0.00 36.19 2.92
1224 1321 1.135721 GTTTGCAGCCCAATCTGATCC 59.864 52.381 0.00 0.00 36.19 3.36
1225 1322 0.627451 TTGCAGCCCAATCTGATCCT 59.373 50.000 0.00 0.00 36.19 3.24
1226 1323 1.510492 TGCAGCCCAATCTGATCCTA 58.490 50.000 0.00 0.00 36.19 2.94
1227 1324 2.060275 TGCAGCCCAATCTGATCCTAT 58.940 47.619 0.00 0.00 36.19 2.57
1228 1325 2.039480 TGCAGCCCAATCTGATCCTATC 59.961 50.000 0.00 0.00 36.19 2.08
1229 1326 2.039480 GCAGCCCAATCTGATCCTATCA 59.961 50.000 0.00 0.00 36.19 2.15
1230 1327 3.308259 GCAGCCCAATCTGATCCTATCAT 60.308 47.826 0.00 0.00 38.85 2.45
1231 1328 4.262617 CAGCCCAATCTGATCCTATCATG 58.737 47.826 0.00 0.00 38.85 3.07
1232 1329 3.266254 AGCCCAATCTGATCCTATCATGG 59.734 47.826 0.00 2.38 38.85 3.66
1233 1330 4.232188 CCCAATCTGATCCTATCATGGG 57.768 50.000 10.98 10.98 45.55 4.00
1235 1332 5.100344 CCAATCTGATCCTATCATGGGAG 57.900 47.826 0.00 0.00 38.85 4.30
1236 1333 4.781621 CCAATCTGATCCTATCATGGGAGA 59.218 45.833 0.00 0.00 38.85 3.71
1237 1334 5.250082 CCAATCTGATCCTATCATGGGAGAA 59.750 44.000 0.00 0.00 38.85 2.87
1238 1335 6.240089 CCAATCTGATCCTATCATGGGAGAAA 60.240 42.308 0.00 0.00 38.85 2.52
1239 1336 7.229308 CAATCTGATCCTATCATGGGAGAAAA 58.771 38.462 0.00 0.00 38.85 2.29
1240 1337 6.829985 TCTGATCCTATCATGGGAGAAAAA 57.170 37.500 0.00 0.00 38.85 1.94
1241 1338 6.595682 TCTGATCCTATCATGGGAGAAAAAC 58.404 40.000 0.00 0.00 38.85 2.43
1242 1339 6.158520 TCTGATCCTATCATGGGAGAAAAACA 59.841 38.462 0.00 0.00 38.85 2.83
1243 1340 6.730447 TGATCCTATCATGGGAGAAAAACAA 58.270 36.000 0.00 0.00 36.21 2.83
1244 1341 6.603201 TGATCCTATCATGGGAGAAAAACAAC 59.397 38.462 0.00 0.00 36.21 3.32
1245 1342 4.941263 TCCTATCATGGGAGAAAAACAACG 59.059 41.667 0.00 0.00 0.00 4.10
1246 1343 3.575965 ATCATGGGAGAAAAACAACGC 57.424 42.857 0.00 0.00 0.00 4.84
1247 1344 1.265635 TCATGGGAGAAAAACAACGCG 59.734 47.619 3.53 3.53 0.00 6.01
1248 1345 1.265635 CATGGGAGAAAAACAACGCGA 59.734 47.619 15.93 0.00 0.00 5.87
1249 1346 1.380524 TGGGAGAAAAACAACGCGAA 58.619 45.000 15.93 0.00 0.00 4.70
1250 1347 1.332375 TGGGAGAAAAACAACGCGAAG 59.668 47.619 15.93 7.13 0.00 3.79
1251 1348 1.600485 GGGAGAAAAACAACGCGAAGA 59.400 47.619 15.93 0.00 0.00 2.87
1252 1349 2.601504 GGGAGAAAAACAACGCGAAGAC 60.602 50.000 15.93 0.00 0.00 3.01
1253 1350 2.287103 GGAGAAAAACAACGCGAAGACT 59.713 45.455 15.93 0.36 0.00 3.24
1254 1351 3.280775 GAGAAAAACAACGCGAAGACTG 58.719 45.455 15.93 4.17 0.00 3.51
1255 1352 2.031683 AGAAAAACAACGCGAAGACTGG 59.968 45.455 15.93 0.00 0.00 4.00
1256 1353 0.661020 AAAACAACGCGAAGACTGGG 59.339 50.000 15.93 0.00 0.00 4.45
1257 1354 0.179067 AAACAACGCGAAGACTGGGA 60.179 50.000 15.93 0.00 0.00 4.37
1258 1355 0.179067 AACAACGCGAAGACTGGGAA 60.179 50.000 15.93 0.00 0.00 3.97
1259 1356 0.179067 ACAACGCGAAGACTGGGAAA 60.179 50.000 15.93 0.00 0.00 3.13
1260 1357 0.941542 CAACGCGAAGACTGGGAAAA 59.058 50.000 15.93 0.00 0.00 2.29
1261 1358 1.535462 CAACGCGAAGACTGGGAAAAT 59.465 47.619 15.93 0.00 0.00 1.82
1262 1359 1.156736 ACGCGAAGACTGGGAAAATG 58.843 50.000 15.93 0.00 0.00 2.32
1263 1360 0.447801 CGCGAAGACTGGGAAAATGG 59.552 55.000 0.00 0.00 0.00 3.16
1264 1361 0.171231 GCGAAGACTGGGAAAATGGC 59.829 55.000 0.00 0.00 0.00 4.40
1265 1362 0.447801 CGAAGACTGGGAAAATGGCG 59.552 55.000 0.00 0.00 0.00 5.69
1266 1363 0.171231 GAAGACTGGGAAAATGGCGC 59.829 55.000 0.00 0.00 0.00 6.53
1267 1364 0.539438 AAGACTGGGAAAATGGCGCA 60.539 50.000 10.83 0.00 0.00 6.09
1268 1365 0.539438 AGACTGGGAAAATGGCGCAA 60.539 50.000 10.83 0.00 0.00 4.85
1269 1366 0.388520 GACTGGGAAAATGGCGCAAC 60.389 55.000 10.83 0.00 0.00 4.17
1270 1367 1.444212 CTGGGAAAATGGCGCAACG 60.444 57.895 10.83 0.00 0.00 4.10
1271 1368 1.861542 CTGGGAAAATGGCGCAACGA 61.862 55.000 10.83 0.00 0.00 3.85
1272 1369 1.154035 GGGAAAATGGCGCAACGAG 60.154 57.895 10.83 0.00 0.00 4.18
1273 1370 1.154035 GGAAAATGGCGCAACGAGG 60.154 57.895 10.83 0.00 0.00 4.63
1274 1371 1.582610 GGAAAATGGCGCAACGAGGA 61.583 55.000 10.83 0.00 0.00 3.71
1275 1372 0.454452 GAAAATGGCGCAACGAGGAC 60.454 55.000 10.83 0.00 0.00 3.85
1276 1373 1.169661 AAAATGGCGCAACGAGGACA 61.170 50.000 10.83 0.00 0.00 4.02
1277 1374 1.169661 AAATGGCGCAACGAGGACAA 61.170 50.000 10.83 0.00 0.00 3.18
1278 1375 1.852067 AATGGCGCAACGAGGACAAC 61.852 55.000 10.83 0.00 0.00 3.32
1279 1376 2.970324 GGCGCAACGAGGACAACA 60.970 61.111 10.83 0.00 0.00 3.33
1280 1377 2.325082 GGCGCAACGAGGACAACAT 61.325 57.895 10.83 0.00 0.00 2.71
1281 1378 1.017177 GGCGCAACGAGGACAACATA 61.017 55.000 10.83 0.00 0.00 2.29
1282 1379 1.006832 GCGCAACGAGGACAACATAT 58.993 50.000 0.30 0.00 0.00 1.78
1283 1380 2.198406 GCGCAACGAGGACAACATATA 58.802 47.619 0.30 0.00 0.00 0.86
1284 1381 2.034001 GCGCAACGAGGACAACATATAC 60.034 50.000 0.30 0.00 0.00 1.47
1285 1382 3.183754 CGCAACGAGGACAACATATACA 58.816 45.455 0.00 0.00 0.00 2.29
1286 1383 3.000078 CGCAACGAGGACAACATATACAC 60.000 47.826 0.00 0.00 0.00 2.90
1287 1384 3.930229 GCAACGAGGACAACATATACACA 59.070 43.478 0.00 0.00 0.00 3.72
1288 1385 4.201685 GCAACGAGGACAACATATACACAC 60.202 45.833 0.00 0.00 0.00 3.82
1289 1386 3.766151 ACGAGGACAACATATACACACG 58.234 45.455 0.00 0.00 0.00 4.49
1290 1387 3.192001 ACGAGGACAACATATACACACGT 59.808 43.478 0.00 0.00 0.00 4.49
1291 1388 3.546271 CGAGGACAACATATACACACGTG 59.454 47.826 15.48 15.48 0.00 4.49
1292 1389 3.857052 AGGACAACATATACACACGTGG 58.143 45.455 21.57 11.39 34.19 4.94
1293 1390 3.259876 AGGACAACATATACACACGTGGT 59.740 43.478 21.57 16.66 34.19 4.16
1294 1391 3.615496 GGACAACATATACACACGTGGTC 59.385 47.826 21.57 12.46 34.19 4.02
1295 1392 3.247442 ACAACATATACACACGTGGTCG 58.753 45.455 21.57 10.37 43.34 4.79
1296 1393 3.057386 ACAACATATACACACGTGGTCGA 60.057 43.478 21.57 6.90 40.62 4.20
1297 1394 3.141002 ACATATACACACGTGGTCGAC 57.859 47.619 21.57 7.13 40.62 4.20
1314 1411 3.999769 TCGACGAACGAGATTACTGAAG 58.000 45.455 0.00 0.00 46.45 3.02
1315 1412 2.526688 CGACGAACGAGATTACTGAAGC 59.473 50.000 0.14 0.00 45.77 3.86
1316 1413 2.516923 ACGAACGAGATTACTGAAGCG 58.483 47.619 0.14 0.00 0.00 4.68
1317 1414 1.846782 CGAACGAGATTACTGAAGCGG 59.153 52.381 0.00 0.00 0.00 5.52
1318 1415 2.477357 CGAACGAGATTACTGAAGCGGA 60.477 50.000 0.00 0.00 0.00 5.54
1319 1416 2.563471 ACGAGATTACTGAAGCGGAC 57.437 50.000 0.00 0.00 0.00 4.79
1320 1417 1.816835 ACGAGATTACTGAAGCGGACA 59.183 47.619 0.00 0.00 0.00 4.02
1321 1418 2.186076 CGAGATTACTGAAGCGGACAC 58.814 52.381 0.00 0.00 0.00 3.67
1322 1419 2.186076 GAGATTACTGAAGCGGACACG 58.814 52.381 0.00 0.00 44.63 4.49
1332 1429 4.657824 CGGACACGCGGTGGAACT 62.658 66.667 12.47 0.00 37.94 3.01
1343 1440 2.832672 GGTGGAACTGATCGAATTGC 57.167 50.000 0.00 0.00 36.74 3.56
1344 1441 2.359900 GGTGGAACTGATCGAATTGCT 58.640 47.619 0.00 0.00 36.74 3.91
1345 1442 2.096496 GGTGGAACTGATCGAATTGCTG 59.904 50.000 0.00 0.00 36.74 4.41
1346 1443 2.744202 GTGGAACTGATCGAATTGCTGT 59.256 45.455 0.00 0.00 0.00 4.40
1347 1444 3.002791 TGGAACTGATCGAATTGCTGTC 58.997 45.455 0.00 0.00 0.00 3.51
1348 1445 3.002791 GGAACTGATCGAATTGCTGTCA 58.997 45.455 0.00 0.00 0.00 3.58
1349 1446 3.063180 GGAACTGATCGAATTGCTGTCAG 59.937 47.826 8.10 8.10 41.47 3.51
1350 1447 3.325293 ACTGATCGAATTGCTGTCAGT 57.675 42.857 9.26 9.26 43.26 3.41
1351 1448 3.257393 ACTGATCGAATTGCTGTCAGTC 58.743 45.455 9.26 0.00 44.37 3.51
1352 1449 2.606725 CTGATCGAATTGCTGTCAGTCC 59.393 50.000 0.93 0.00 33.42 3.85
1353 1450 1.590238 GATCGAATTGCTGTCAGTCCG 59.410 52.381 0.93 0.00 0.00 4.79
1354 1451 0.317160 TCGAATTGCTGTCAGTCCGT 59.683 50.000 0.93 0.00 0.00 4.69
1355 1452 0.716108 CGAATTGCTGTCAGTCCGTC 59.284 55.000 0.93 0.00 0.00 4.79
1356 1453 1.795768 GAATTGCTGTCAGTCCGTCA 58.204 50.000 0.93 0.00 0.00 4.35
1357 1454 2.350522 GAATTGCTGTCAGTCCGTCAT 58.649 47.619 0.93 0.00 0.00 3.06
1358 1455 2.015736 ATTGCTGTCAGTCCGTCATC 57.984 50.000 0.93 0.00 0.00 2.92
1359 1456 0.678950 TTGCTGTCAGTCCGTCATCA 59.321 50.000 0.93 0.00 0.00 3.07
1360 1457 0.244721 TGCTGTCAGTCCGTCATCAG 59.755 55.000 0.93 0.00 0.00 2.90
1361 1458 0.528017 GCTGTCAGTCCGTCATCAGA 59.472 55.000 0.93 0.00 0.00 3.27
1362 1459 1.135915 GCTGTCAGTCCGTCATCAGAT 59.864 52.381 0.93 0.00 0.00 2.90
1363 1460 2.417924 GCTGTCAGTCCGTCATCAGATT 60.418 50.000 0.93 0.00 0.00 2.40
1364 1461 3.854666 CTGTCAGTCCGTCATCAGATTT 58.145 45.455 0.00 0.00 0.00 2.17
1365 1462 3.588955 TGTCAGTCCGTCATCAGATTTG 58.411 45.455 0.00 0.00 0.00 2.32
1366 1463 3.006859 TGTCAGTCCGTCATCAGATTTGT 59.993 43.478 0.00 0.00 0.00 2.83
1367 1464 3.997021 GTCAGTCCGTCATCAGATTTGTT 59.003 43.478 0.00 0.00 0.00 2.83
1368 1465 4.452455 GTCAGTCCGTCATCAGATTTGTTT 59.548 41.667 0.00 0.00 0.00 2.83
1369 1466 5.049405 GTCAGTCCGTCATCAGATTTGTTTT 60.049 40.000 0.00 0.00 0.00 2.43
1370 1467 5.049474 TCAGTCCGTCATCAGATTTGTTTTG 60.049 40.000 0.00 0.00 0.00 2.44
1371 1468 5.049474 CAGTCCGTCATCAGATTTGTTTTGA 60.049 40.000 0.00 0.00 0.00 2.69
1372 1469 5.530915 AGTCCGTCATCAGATTTGTTTTGAA 59.469 36.000 0.00 0.00 0.00 2.69
1373 1470 6.207417 AGTCCGTCATCAGATTTGTTTTGAAT 59.793 34.615 0.00 0.00 0.00 2.57
1374 1471 6.863126 GTCCGTCATCAGATTTGTTTTGAATT 59.137 34.615 0.00 0.00 0.00 2.17
1375 1472 7.382218 GTCCGTCATCAGATTTGTTTTGAATTT 59.618 33.333 0.00 0.00 0.00 1.82
1376 1473 7.381948 TCCGTCATCAGATTTGTTTTGAATTTG 59.618 33.333 0.00 0.00 0.00 2.32
1377 1474 7.381948 CCGTCATCAGATTTGTTTTGAATTTGA 59.618 33.333 0.00 0.00 33.76 2.69
1378 1475 8.918658 CGTCATCAGATTTGTTTTGAATTTGAT 58.081 29.630 0.00 0.00 38.26 2.57
1380 1477 9.984190 TCATCAGATTTGTTTTGAATTTGATCA 57.016 25.926 0.00 0.00 36.66 2.92
1389 1486 8.606040 TGTTTTGAATTTGATCAAGATTTCCC 57.394 30.769 8.41 2.20 40.21 3.97
1390 1487 8.431222 TGTTTTGAATTTGATCAAGATTTCCCT 58.569 29.630 8.41 0.00 40.21 4.20
1391 1488 9.276590 GTTTTGAATTTGATCAAGATTTCCCTT 57.723 29.630 8.41 0.00 40.21 3.95
1392 1489 9.492973 TTTTGAATTTGATCAAGATTTCCCTTC 57.507 29.630 8.41 4.36 40.21 3.46
1393 1490 6.855836 TGAATTTGATCAAGATTTCCCTTCG 58.144 36.000 8.41 0.00 0.00 3.79
1394 1491 6.434028 TGAATTTGATCAAGATTTCCCTTCGT 59.566 34.615 8.41 0.00 0.00 3.85
1395 1492 5.880054 TTTGATCAAGATTTCCCTTCGTC 57.120 39.130 8.41 0.00 0.00 4.20
1396 1493 4.551702 TGATCAAGATTTCCCTTCGTCA 57.448 40.909 0.00 0.00 0.00 4.35
1397 1494 4.253685 TGATCAAGATTTCCCTTCGTCAC 58.746 43.478 0.00 0.00 0.00 3.67
1398 1495 4.020218 TGATCAAGATTTCCCTTCGTCACT 60.020 41.667 0.00 0.00 0.00 3.41
1399 1496 3.926616 TCAAGATTTCCCTTCGTCACTC 58.073 45.455 0.00 0.00 0.00 3.51
1400 1497 3.578716 TCAAGATTTCCCTTCGTCACTCT 59.421 43.478 0.00 0.00 0.00 3.24
1401 1498 3.601443 AGATTTCCCTTCGTCACTCTG 57.399 47.619 0.00 0.00 0.00 3.35
1402 1499 2.003301 GATTTCCCTTCGTCACTCTGC 58.997 52.381 0.00 0.00 0.00 4.26
1403 1500 1.048601 TTTCCCTTCGTCACTCTGCT 58.951 50.000 0.00 0.00 0.00 4.24
1404 1501 0.603569 TTCCCTTCGTCACTCTGCTC 59.396 55.000 0.00 0.00 0.00 4.26
1405 1502 1.153939 CCCTTCGTCACTCTGCTCG 60.154 63.158 0.00 0.00 0.00 5.03
1406 1503 1.581954 CCTTCGTCACTCTGCTCGT 59.418 57.895 0.00 0.00 0.00 4.18
1407 1504 0.455295 CCTTCGTCACTCTGCTCGTC 60.455 60.000 0.00 0.00 0.00 4.20
1408 1505 0.238553 CTTCGTCACTCTGCTCGTCA 59.761 55.000 0.00 0.00 0.00 4.35
1447 1544 4.043100 TCCAGGCGACTCCGGAGA 62.043 66.667 37.69 10.30 40.21 3.71
1574 1672 3.391382 CTTCCTCCCTCCCGCGTT 61.391 66.667 4.92 0.00 0.00 4.84
1588 1686 2.046314 CGTTTCAGGGGTGGCGAT 60.046 61.111 0.00 0.00 0.00 4.58
1609 1707 0.695924 CCCCAACATGTGTGGAGGTA 59.304 55.000 21.54 0.00 0.00 3.08
1610 1708 1.284785 CCCCAACATGTGTGGAGGTAT 59.715 52.381 21.54 0.00 0.00 2.73
1615 1713 0.255604 CATGTGTGGAGGTATGGCCA 59.744 55.000 8.56 8.56 40.61 5.36
1621 1719 3.118038 GTGTGGAGGTATGGCCAATCTAA 60.118 47.826 10.96 0.00 40.61 2.10
1755 1855 4.132336 GCATGTCATCTGGCTTTAGATCA 58.868 43.478 0.00 0.00 35.28 2.92
1926 2028 0.824109 CTGCGAGTTGGGGAGACATA 59.176 55.000 0.00 0.00 0.00 2.29
1927 2029 1.207089 CTGCGAGTTGGGGAGACATAA 59.793 52.381 0.00 0.00 0.00 1.90
1931 2033 3.873910 CGAGTTGGGGAGACATAATTGT 58.126 45.455 0.00 0.00 39.32 2.71
2018 2120 2.224079 GTCGTGTAACTACTGTCGACCA 59.776 50.000 14.12 0.00 38.32 4.02
2023 2125 3.884693 TGTAACTACTGTCGACCAACTCA 59.115 43.478 14.12 0.00 0.00 3.41
2097 2199 0.104304 ACTGCGGTGTCGTTTCTCTT 59.896 50.000 0.00 0.00 38.89 2.85
2296 2398 1.228429 GGCTGGTGGTACTTGGCAA 60.228 57.895 0.00 0.00 0.00 4.52
2308 2410 4.848000 TGGCAACATGGTGCTGAT 57.152 50.000 33.23 0.00 46.17 2.90
2341 2443 0.098905 GATCGTGACGTGCTCAGCTA 59.901 55.000 4.40 0.00 0.00 3.32
2357 2459 1.521457 CTATTTGCGCGCAGGGAGA 60.521 57.895 34.25 16.94 46.37 3.71
2422 2525 3.881688 GAGCAAGGTTGATGCATCAGTAT 59.118 43.478 27.25 15.14 46.22 2.12
2621 2733 3.738830 AGGTGTAGCGACAGTTTGTTA 57.261 42.857 0.00 0.00 35.82 2.41
2704 2816 5.689383 AATAAAATCGCCTTATGCATCGT 57.311 34.783 0.19 0.00 41.33 3.73
2839 2955 2.029838 AGCATTCAAGAGCTTACCCG 57.970 50.000 0.00 0.00 38.01 5.28
3094 3210 5.010922 TCACTTTGCCAATCTAATTTGCTGT 59.989 36.000 0.00 0.00 32.61 4.40
3114 3233 5.450550 GCTGTGGGTAGAATTATTTTGGCTC 60.451 44.000 0.00 0.00 0.00 4.70
3140 3259 6.151985 TGTTTATGCAAATGTACCAACTAGGG 59.848 38.462 0.00 0.00 43.89 3.53
3180 3299 5.789643 ATAATGTATGGGTGCATTTGACC 57.210 39.130 0.00 0.00 40.48 4.02
3379 3861 6.195165 GTCAACAAGACTGAATCAAAGACAC 58.805 40.000 0.00 0.00 44.09 3.67
3549 4035 4.472108 TGTTCGGTATAAGGGAAATCACCT 59.528 41.667 0.00 0.00 40.96 4.00
3625 4122 6.319405 GTGAACAGGAACCAGGTTTTTACTTA 59.681 38.462 6.21 0.00 0.00 2.24
3688 4185 9.554395 TGTTAATCAAATATCGCTCTTGGAATA 57.446 29.630 0.00 0.00 0.00 1.75
3735 4232 4.881440 GCCATGGCCGCATCTCCA 62.881 66.667 27.24 0.00 36.70 3.86
3753 4250 7.274468 GCATCTCCATGTCTACATTTCTATACG 59.726 40.741 0.00 0.00 33.61 3.06
3769 4266 6.774354 TCTATACGTCCGAAATTAAATGGC 57.226 37.500 0.00 0.00 0.00 4.40
3775 4272 4.035792 CGTCCGAAATTAAATGGCCATGTA 59.964 41.667 21.63 16.50 0.00 2.29
3865 4362 0.467659 GGGCCTAGCTCGAGAGGTAA 60.468 60.000 18.75 0.00 40.42 2.85
3867 4364 1.964933 GGCCTAGCTCGAGAGGTAAAT 59.035 52.381 18.75 0.00 40.42 1.40
3906 4403 8.147058 AGAAGTATGCTTGTATTCCTATCACAG 58.853 37.037 0.00 0.00 34.61 3.66
3935 4432 5.124457 GCACAAGAACCAGATCACATACAAT 59.876 40.000 0.00 0.00 0.00 2.71
3938 4435 6.596888 ACAAGAACCAGATCACATACAATCAG 59.403 38.462 0.00 0.00 0.00 2.90
3946 4443 4.110036 TCACATACAATCAGACACTCGG 57.890 45.455 0.00 0.00 0.00 4.63
3947 4444 3.509967 TCACATACAATCAGACACTCGGT 59.490 43.478 0.00 0.00 0.00 4.69
3960 4457 1.200252 CACTCGGTCTCACACGATCTT 59.800 52.381 0.00 0.00 38.56 2.40
3977 4474 0.884704 CTTTCTGGACACCCCACACG 60.885 60.000 0.00 0.00 40.82 4.49
3991 4488 0.955428 CACACGTCCCAGGACATTGG 60.955 60.000 16.78 3.07 44.77 3.16
3992 4489 1.374947 CACGTCCCAGGACATTGGT 59.625 57.895 16.78 3.69 44.77 3.67
3993 4490 0.611200 CACGTCCCAGGACATTGGTA 59.389 55.000 16.78 0.00 44.77 3.25
3994 4491 0.611714 ACGTCCCAGGACATTGGTAC 59.388 55.000 16.78 0.00 44.77 3.34
4004 4501 2.421424 GGACATTGGTACGTACGAGACT 59.579 50.000 24.41 1.05 0.00 3.24
4047 4544 3.073798 AGTTGAGAGTCACTCCAGAGAGA 59.926 47.826 0.00 0.00 43.39 3.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
64 65 2.081462 CCTGGCCTTTTTACAGGTACG 58.919 52.381 3.32 0.00 45.21 3.67
180 181 7.729124 ACTTAATAAGGTGCTAGTCCTAACA 57.271 36.000 4.92 0.37 34.56 2.41
200 201 3.199946 CCAAGCATCCCTCCAAGTACTTA 59.800 47.826 8.04 0.00 0.00 2.24
473 478 2.291024 TGTAGGTCCAGAGACTCCAGAC 60.291 54.545 12.12 12.12 43.05 3.51
642 647 0.833287 TTAGACAGCAGATGCCCTCC 59.167 55.000 0.14 0.00 43.38 4.30
861 902 4.957684 AATAATACCTCACCTTCCGGAG 57.042 45.455 3.34 0.00 0.00 4.63
909 950 9.169592 TGGTAACATAGATTAGTAAAAAGGCAC 57.830 33.333 0.00 0.00 46.17 5.01
952 1044 6.554334 TCCTTTTGTTAGATACTGCAACAC 57.446 37.500 0.00 0.00 32.19 3.32
982 1074 4.553330 ACATGACAGGGAACTTCGTAAT 57.447 40.909 0.00 0.00 40.21 1.89
1057 1149 3.149196 ACAATGAACAAGTTGCCGAGAT 58.851 40.909 1.81 0.00 0.00 2.75
1169 1263 5.387279 CATTAGCCGTAAACACAACGAATT 58.613 37.500 0.00 0.00 42.90 2.17
1201 1298 0.529378 CAGATTGGGCTGCAAACTCC 59.471 55.000 0.50 0.00 0.00 3.85
1202 1299 1.538047 TCAGATTGGGCTGCAAACTC 58.462 50.000 0.50 0.00 35.86 3.01
1203 1300 2.097825 GATCAGATTGGGCTGCAAACT 58.902 47.619 0.50 0.00 35.86 2.66
1204 1301 1.135721 GGATCAGATTGGGCTGCAAAC 59.864 52.381 0.50 0.00 35.86 2.93
1205 1302 1.006281 AGGATCAGATTGGGCTGCAAA 59.994 47.619 0.50 0.00 35.86 3.68
1206 1303 0.627451 AGGATCAGATTGGGCTGCAA 59.373 50.000 0.50 0.00 35.86 4.08
1207 1304 1.510492 TAGGATCAGATTGGGCTGCA 58.490 50.000 0.50 0.00 35.86 4.41
1208 1305 2.039480 TGATAGGATCAGATTGGGCTGC 59.961 50.000 0.00 0.00 35.86 5.25
1209 1306 4.262617 CATGATAGGATCAGATTGGGCTG 58.737 47.826 0.00 0.00 43.53 4.85
1210 1307 3.266254 CCATGATAGGATCAGATTGGGCT 59.734 47.826 0.00 0.00 43.53 5.19
1211 1308 3.618351 CCATGATAGGATCAGATTGGGC 58.382 50.000 0.00 0.00 43.53 5.36
1212 1309 4.232188 CCCATGATAGGATCAGATTGGG 57.768 50.000 10.70 10.70 45.55 4.12
1213 1310 4.781621 TCTCCCATGATAGGATCAGATTGG 59.218 45.833 0.00 1.99 43.53 3.16
1214 1311 6.370186 TTCTCCCATGATAGGATCAGATTG 57.630 41.667 0.00 0.00 43.53 2.67
1215 1312 7.398289 TTTTCTCCCATGATAGGATCAGATT 57.602 36.000 0.00 0.00 43.53 2.40
1216 1313 7.147248 TGTTTTTCTCCCATGATAGGATCAGAT 60.147 37.037 0.00 0.00 43.53 2.90
1217 1314 6.158520 TGTTTTTCTCCCATGATAGGATCAGA 59.841 38.462 0.00 0.00 43.53 3.27
1218 1315 6.359804 TGTTTTTCTCCCATGATAGGATCAG 58.640 40.000 0.00 0.00 43.53 2.90
1219 1316 6.325993 TGTTTTTCTCCCATGATAGGATCA 57.674 37.500 0.00 0.00 44.55 2.92
1220 1317 6.238484 CGTTGTTTTTCTCCCATGATAGGATC 60.238 42.308 0.00 0.00 31.48 3.36
1221 1318 5.590259 CGTTGTTTTTCTCCCATGATAGGAT 59.410 40.000 0.00 0.00 31.48 3.24
1222 1319 4.941263 CGTTGTTTTTCTCCCATGATAGGA 59.059 41.667 0.00 0.00 0.00 2.94
1223 1320 4.438744 GCGTTGTTTTTCTCCCATGATAGG 60.439 45.833 0.00 0.00 0.00 2.57
1224 1321 4.662145 GCGTTGTTTTTCTCCCATGATAG 58.338 43.478 0.00 0.00 0.00 2.08
1225 1322 3.126171 CGCGTTGTTTTTCTCCCATGATA 59.874 43.478 0.00 0.00 0.00 2.15
1226 1323 2.095263 CGCGTTGTTTTTCTCCCATGAT 60.095 45.455 0.00 0.00 0.00 2.45
1227 1324 1.265635 CGCGTTGTTTTTCTCCCATGA 59.734 47.619 0.00 0.00 0.00 3.07
1228 1325 1.265635 TCGCGTTGTTTTTCTCCCATG 59.734 47.619 5.77 0.00 0.00 3.66
1229 1326 1.600023 TCGCGTTGTTTTTCTCCCAT 58.400 45.000 5.77 0.00 0.00 4.00
1230 1327 1.332375 CTTCGCGTTGTTTTTCTCCCA 59.668 47.619 5.77 0.00 0.00 4.37
1231 1328 1.600485 TCTTCGCGTTGTTTTTCTCCC 59.400 47.619 5.77 0.00 0.00 4.30
1232 1329 2.287103 AGTCTTCGCGTTGTTTTTCTCC 59.713 45.455 5.77 0.00 0.00 3.71
1233 1330 3.280775 CAGTCTTCGCGTTGTTTTTCTC 58.719 45.455 5.77 0.00 0.00 2.87
1234 1331 2.031683 CCAGTCTTCGCGTTGTTTTTCT 59.968 45.455 5.77 0.00 0.00 2.52
1235 1332 2.372350 CCAGTCTTCGCGTTGTTTTTC 58.628 47.619 5.77 0.00 0.00 2.29
1236 1333 1.064952 CCCAGTCTTCGCGTTGTTTTT 59.935 47.619 5.77 0.00 0.00 1.94
1237 1334 0.661020 CCCAGTCTTCGCGTTGTTTT 59.339 50.000 5.77 0.00 0.00 2.43
1238 1335 0.179067 TCCCAGTCTTCGCGTTGTTT 60.179 50.000 5.77 0.00 0.00 2.83
1239 1336 0.179067 TTCCCAGTCTTCGCGTTGTT 60.179 50.000 5.77 0.00 0.00 2.83
1240 1337 0.179067 TTTCCCAGTCTTCGCGTTGT 60.179 50.000 5.77 0.00 0.00 3.32
1241 1338 0.941542 TTTTCCCAGTCTTCGCGTTG 59.058 50.000 5.77 0.00 0.00 4.10
1242 1339 1.535462 CATTTTCCCAGTCTTCGCGTT 59.465 47.619 5.77 0.00 0.00 4.84
1243 1340 1.156736 CATTTTCCCAGTCTTCGCGT 58.843 50.000 5.77 0.00 0.00 6.01
1244 1341 0.447801 CCATTTTCCCAGTCTTCGCG 59.552 55.000 0.00 0.00 0.00 5.87
1245 1342 0.171231 GCCATTTTCCCAGTCTTCGC 59.829 55.000 0.00 0.00 0.00 4.70
1246 1343 0.447801 CGCCATTTTCCCAGTCTTCG 59.552 55.000 0.00 0.00 0.00 3.79
1247 1344 0.171231 GCGCCATTTTCCCAGTCTTC 59.829 55.000 0.00 0.00 0.00 2.87
1248 1345 0.539438 TGCGCCATTTTCCCAGTCTT 60.539 50.000 4.18 0.00 0.00 3.01
1249 1346 0.539438 TTGCGCCATTTTCCCAGTCT 60.539 50.000 4.18 0.00 0.00 3.24
1250 1347 0.388520 GTTGCGCCATTTTCCCAGTC 60.389 55.000 4.18 0.00 0.00 3.51
1251 1348 1.665442 GTTGCGCCATTTTCCCAGT 59.335 52.632 4.18 0.00 0.00 4.00
1252 1349 1.444212 CGTTGCGCCATTTTCCCAG 60.444 57.895 4.18 0.00 0.00 4.45
1253 1350 1.861542 CTCGTTGCGCCATTTTCCCA 61.862 55.000 4.18 0.00 0.00 4.37
1254 1351 1.154035 CTCGTTGCGCCATTTTCCC 60.154 57.895 4.18 0.00 0.00 3.97
1255 1352 1.154035 CCTCGTTGCGCCATTTTCC 60.154 57.895 4.18 0.00 0.00 3.13
1256 1353 0.454452 GTCCTCGTTGCGCCATTTTC 60.454 55.000 4.18 0.00 0.00 2.29
1257 1354 1.169661 TGTCCTCGTTGCGCCATTTT 61.170 50.000 4.18 0.00 0.00 1.82
1258 1355 1.169661 TTGTCCTCGTTGCGCCATTT 61.170 50.000 4.18 0.00 0.00 2.32
1259 1356 1.599518 TTGTCCTCGTTGCGCCATT 60.600 52.632 4.18 0.00 0.00 3.16
1260 1357 2.031919 TTGTCCTCGTTGCGCCAT 59.968 55.556 4.18 0.00 0.00 4.40
1261 1358 2.970324 GTTGTCCTCGTTGCGCCA 60.970 61.111 4.18 0.00 0.00 5.69
1262 1359 1.017177 TATGTTGTCCTCGTTGCGCC 61.017 55.000 4.18 0.00 0.00 6.53
1263 1360 1.006832 ATATGTTGTCCTCGTTGCGC 58.993 50.000 0.00 0.00 0.00 6.09
1264 1361 3.000078 GTGTATATGTTGTCCTCGTTGCG 60.000 47.826 0.00 0.00 0.00 4.85
1265 1362 3.930229 TGTGTATATGTTGTCCTCGTTGC 59.070 43.478 0.00 0.00 0.00 4.17
1266 1363 4.031314 CGTGTGTATATGTTGTCCTCGTTG 59.969 45.833 0.00 0.00 0.00 4.10
1267 1364 4.171005 CGTGTGTATATGTTGTCCTCGTT 58.829 43.478 0.00 0.00 0.00 3.85
1268 1365 3.192001 ACGTGTGTATATGTTGTCCTCGT 59.808 43.478 0.00 0.00 0.00 4.18
1269 1366 3.546271 CACGTGTGTATATGTTGTCCTCG 59.454 47.826 7.58 0.00 0.00 4.63
1270 1367 3.863424 CCACGTGTGTATATGTTGTCCTC 59.137 47.826 15.65 0.00 0.00 3.71
1271 1368 3.259876 ACCACGTGTGTATATGTTGTCCT 59.740 43.478 15.65 0.00 0.00 3.85
1272 1369 3.592059 ACCACGTGTGTATATGTTGTCC 58.408 45.455 15.65 0.00 0.00 4.02
1273 1370 3.302434 CGACCACGTGTGTATATGTTGTC 59.698 47.826 15.65 9.22 32.09 3.18
1274 1371 3.057386 TCGACCACGTGTGTATATGTTGT 60.057 43.478 15.65 0.22 40.69 3.32
1275 1372 3.302434 GTCGACCACGTGTGTATATGTTG 59.698 47.826 15.65 7.24 40.69 3.33
1276 1373 3.504863 GTCGACCACGTGTGTATATGTT 58.495 45.455 15.65 0.00 40.69 2.71
1277 1374 2.476686 CGTCGACCACGTGTGTATATGT 60.477 50.000 15.65 2.64 44.07 2.29
1278 1375 2.106418 CGTCGACCACGTGTGTATATG 58.894 52.381 15.65 0.00 44.07 1.78
1279 1376 2.463553 CGTCGACCACGTGTGTATAT 57.536 50.000 15.65 0.00 44.07 0.86
1280 1377 3.973923 CGTCGACCACGTGTGTATA 57.026 52.632 15.65 1.38 44.07 1.47
1281 1378 4.853507 CGTCGACCACGTGTGTAT 57.146 55.556 15.65 0.00 44.07 2.29
1289 1386 2.159599 AGTAATCTCGTTCGTCGACCAC 60.160 50.000 10.58 6.22 44.01 4.16
1290 1387 2.079158 AGTAATCTCGTTCGTCGACCA 58.921 47.619 10.58 0.00 44.01 4.02
1291 1388 2.094894 TCAGTAATCTCGTTCGTCGACC 59.905 50.000 10.58 0.00 44.01 4.79
1292 1389 3.380486 TCAGTAATCTCGTTCGTCGAC 57.620 47.619 5.18 5.18 44.01 4.20
1293 1390 3.727079 GCTTCAGTAATCTCGTTCGTCGA 60.727 47.826 0.00 0.00 46.83 4.20
1294 1391 2.526688 GCTTCAGTAATCTCGTTCGTCG 59.473 50.000 0.00 0.00 41.41 5.12
1295 1392 2.526688 CGCTTCAGTAATCTCGTTCGTC 59.473 50.000 0.00 0.00 0.00 4.20
1296 1393 2.516923 CGCTTCAGTAATCTCGTTCGT 58.483 47.619 0.00 0.00 0.00 3.85
1297 1394 1.846782 CCGCTTCAGTAATCTCGTTCG 59.153 52.381 0.00 0.00 0.00 3.95
1298 1395 2.853003 GTCCGCTTCAGTAATCTCGTTC 59.147 50.000 0.00 0.00 0.00 3.95
1299 1396 2.230508 TGTCCGCTTCAGTAATCTCGTT 59.769 45.455 0.00 0.00 0.00 3.85
1300 1397 1.816835 TGTCCGCTTCAGTAATCTCGT 59.183 47.619 0.00 0.00 0.00 4.18
1301 1398 2.186076 GTGTCCGCTTCAGTAATCTCG 58.814 52.381 0.00 0.00 0.00 4.04
1302 1399 2.186076 CGTGTCCGCTTCAGTAATCTC 58.814 52.381 0.00 0.00 0.00 2.75
1303 1400 2.279582 CGTGTCCGCTTCAGTAATCT 57.720 50.000 0.00 0.00 0.00 2.40
1315 1412 4.657824 AGTTCCACCGCGTGTCCG 62.658 66.667 4.92 0.00 37.07 4.79
1316 1413 2.781595 ATCAGTTCCACCGCGTGTCC 62.782 60.000 4.92 0.00 0.00 4.02
1317 1414 1.352156 GATCAGTTCCACCGCGTGTC 61.352 60.000 4.92 0.00 0.00 3.67
1318 1415 1.374252 GATCAGTTCCACCGCGTGT 60.374 57.895 4.92 0.00 0.00 4.49
1319 1416 2.444624 CGATCAGTTCCACCGCGTG 61.445 63.158 4.92 3.32 0.00 5.34
1320 1417 2.126071 CGATCAGTTCCACCGCGT 60.126 61.111 4.92 0.00 0.00 6.01
1321 1418 0.806102 ATTCGATCAGTTCCACCGCG 60.806 55.000 0.00 0.00 0.00 6.46
1322 1419 1.062587 CAATTCGATCAGTTCCACCGC 59.937 52.381 0.00 0.00 0.00 5.68
1323 1420 1.062587 GCAATTCGATCAGTTCCACCG 59.937 52.381 0.00 0.00 0.00 4.94
1324 1421 2.096496 CAGCAATTCGATCAGTTCCACC 59.904 50.000 0.00 0.00 0.00 4.61
1325 1422 2.744202 ACAGCAATTCGATCAGTTCCAC 59.256 45.455 0.00 0.00 0.00 4.02
1326 1423 3.002791 GACAGCAATTCGATCAGTTCCA 58.997 45.455 0.00 0.00 0.00 3.53
1327 1424 3.002791 TGACAGCAATTCGATCAGTTCC 58.997 45.455 0.00 0.00 0.00 3.62
1328 1425 3.681897 ACTGACAGCAATTCGATCAGTTC 59.318 43.478 9.26 0.00 45.98 3.01
1329 1426 3.668447 ACTGACAGCAATTCGATCAGTT 58.332 40.909 9.26 0.00 45.98 3.16
1330 1427 3.325293 ACTGACAGCAATTCGATCAGT 57.675 42.857 9.26 9.26 43.96 3.41
1331 1428 2.606725 GGACTGACAGCAATTCGATCAG 59.393 50.000 1.25 8.10 42.07 2.90
1332 1429 2.621338 GGACTGACAGCAATTCGATCA 58.379 47.619 1.25 0.00 0.00 2.92
1333 1430 1.590238 CGGACTGACAGCAATTCGATC 59.410 52.381 1.25 0.00 0.00 3.69
1334 1431 1.066858 ACGGACTGACAGCAATTCGAT 60.067 47.619 1.25 0.00 0.00 3.59
1335 1432 0.317160 ACGGACTGACAGCAATTCGA 59.683 50.000 1.25 0.00 0.00 3.71
1336 1433 0.716108 GACGGACTGACAGCAATTCG 59.284 55.000 1.25 0.00 0.00 3.34
1337 1434 1.795768 TGACGGACTGACAGCAATTC 58.204 50.000 1.25 0.00 0.00 2.17
1338 1435 2.289631 TGATGACGGACTGACAGCAATT 60.290 45.455 1.25 0.00 35.80 2.32
1339 1436 1.276138 TGATGACGGACTGACAGCAAT 59.724 47.619 1.25 0.00 35.80 3.56
1340 1437 0.678950 TGATGACGGACTGACAGCAA 59.321 50.000 1.25 0.00 35.80 3.91
1341 1438 0.244721 CTGATGACGGACTGACAGCA 59.755 55.000 1.25 4.69 36.35 4.41
1342 1439 0.528017 TCTGATGACGGACTGACAGC 59.472 55.000 1.25 0.00 0.00 4.40
1343 1440 3.516981 AATCTGATGACGGACTGACAG 57.483 47.619 0.00 0.00 33.97 3.51
1344 1441 3.006859 ACAAATCTGATGACGGACTGACA 59.993 43.478 0.00 0.00 33.97 3.58
1345 1442 3.589988 ACAAATCTGATGACGGACTGAC 58.410 45.455 0.00 0.00 33.97 3.51
1346 1443 3.961480 ACAAATCTGATGACGGACTGA 57.039 42.857 0.00 0.00 33.97 3.41
1347 1444 5.049474 TCAAAACAAATCTGATGACGGACTG 60.049 40.000 0.00 0.00 33.97 3.51
1348 1445 5.063204 TCAAAACAAATCTGATGACGGACT 58.937 37.500 0.00 0.00 33.97 3.85
1349 1446 5.356882 TCAAAACAAATCTGATGACGGAC 57.643 39.130 0.00 0.00 33.97 4.79
1350 1447 6.573664 ATTCAAAACAAATCTGATGACGGA 57.426 33.333 0.00 0.00 35.76 4.69
1351 1448 7.381948 TCAAATTCAAAACAAATCTGATGACGG 59.618 33.333 0.00 0.00 0.00 4.79
1352 1449 8.284557 TCAAATTCAAAACAAATCTGATGACG 57.715 30.769 0.00 0.00 0.00 4.35
1354 1451 9.984190 TGATCAAATTCAAAACAAATCTGATGA 57.016 25.926 0.00 0.00 0.00 2.92
1363 1460 9.054922 GGGAAATCTTGATCAAATTCAAAACAA 57.945 29.630 20.80 0.00 35.31 2.83
1364 1461 8.431222 AGGGAAATCTTGATCAAATTCAAAACA 58.569 29.630 20.80 0.00 35.31 2.83
1365 1462 8.837788 AGGGAAATCTTGATCAAATTCAAAAC 57.162 30.769 20.80 12.47 35.31 2.43
1366 1463 9.492973 GAAGGGAAATCTTGATCAAATTCAAAA 57.507 29.630 20.80 0.00 35.31 2.44
1367 1464 7.814107 CGAAGGGAAATCTTGATCAAATTCAAA 59.186 33.333 20.80 3.12 35.31 2.69
1368 1465 7.039784 ACGAAGGGAAATCTTGATCAAATTCAA 60.040 33.333 20.80 4.47 34.55 2.69
1369 1466 6.434028 ACGAAGGGAAATCTTGATCAAATTCA 59.566 34.615 20.80 5.12 0.00 2.57
1370 1467 6.856895 ACGAAGGGAAATCTTGATCAAATTC 58.143 36.000 9.88 13.15 0.00 2.17
1371 1468 6.434028 TGACGAAGGGAAATCTTGATCAAATT 59.566 34.615 9.88 9.30 0.00 1.82
1372 1469 5.945784 TGACGAAGGGAAATCTTGATCAAAT 59.054 36.000 9.88 3.72 0.00 2.32
1373 1470 5.181245 GTGACGAAGGGAAATCTTGATCAAA 59.819 40.000 9.88 1.39 0.00 2.69
1374 1471 4.695455 GTGACGAAGGGAAATCTTGATCAA 59.305 41.667 8.12 8.12 0.00 2.57
1375 1472 4.020218 AGTGACGAAGGGAAATCTTGATCA 60.020 41.667 0.00 0.00 0.00 2.92
1376 1473 4.508662 AGTGACGAAGGGAAATCTTGATC 58.491 43.478 0.00 0.00 0.00 2.92
1377 1474 4.223923 AGAGTGACGAAGGGAAATCTTGAT 59.776 41.667 0.00 0.00 0.00 2.57
1378 1475 3.578716 AGAGTGACGAAGGGAAATCTTGA 59.421 43.478 0.00 0.00 0.00 3.02
1379 1476 3.681897 CAGAGTGACGAAGGGAAATCTTG 59.318 47.826 0.00 0.00 0.00 3.02
1380 1477 3.866449 GCAGAGTGACGAAGGGAAATCTT 60.866 47.826 0.00 0.00 0.00 2.40
1381 1478 2.354203 GCAGAGTGACGAAGGGAAATCT 60.354 50.000 0.00 0.00 0.00 2.40
1382 1479 2.003301 GCAGAGTGACGAAGGGAAATC 58.997 52.381 0.00 0.00 0.00 2.17
1383 1480 1.625818 AGCAGAGTGACGAAGGGAAAT 59.374 47.619 0.00 0.00 0.00 2.17
1384 1481 1.000955 GAGCAGAGTGACGAAGGGAAA 59.999 52.381 0.00 0.00 0.00 3.13
1385 1482 0.603569 GAGCAGAGTGACGAAGGGAA 59.396 55.000 0.00 0.00 0.00 3.97
1386 1483 1.587043 CGAGCAGAGTGACGAAGGGA 61.587 60.000 0.00 0.00 0.00 4.20
1387 1484 1.153939 CGAGCAGAGTGACGAAGGG 60.154 63.158 0.00 0.00 0.00 3.95
1388 1485 0.455295 GACGAGCAGAGTGACGAAGG 60.455 60.000 0.00 0.00 0.00 3.46
1389 1486 0.238553 TGACGAGCAGAGTGACGAAG 59.761 55.000 0.00 0.00 0.00 3.79
1390 1487 0.666374 TTGACGAGCAGAGTGACGAA 59.334 50.000 0.00 0.00 0.00 3.85
1391 1488 0.881796 ATTGACGAGCAGAGTGACGA 59.118 50.000 0.00 0.00 0.00 4.20
1392 1489 1.135546 AGATTGACGAGCAGAGTGACG 60.136 52.381 0.00 0.00 0.00 4.35
1393 1490 2.257894 CAGATTGACGAGCAGAGTGAC 58.742 52.381 0.00 0.00 0.00 3.67
1394 1491 1.403382 GCAGATTGACGAGCAGAGTGA 60.403 52.381 0.00 0.00 0.00 3.41
1395 1492 0.997932 GCAGATTGACGAGCAGAGTG 59.002 55.000 0.00 0.00 0.00 3.51
1396 1493 0.108424 GGCAGATTGACGAGCAGAGT 60.108 55.000 0.00 0.00 0.00 3.24
1397 1494 0.175302 AGGCAGATTGACGAGCAGAG 59.825 55.000 0.00 0.00 0.00 3.35
1398 1495 0.174389 GAGGCAGATTGACGAGCAGA 59.826 55.000 0.00 0.00 0.00 4.26
1399 1496 0.809241 GGAGGCAGATTGACGAGCAG 60.809 60.000 0.00 0.00 0.00 4.24
1400 1497 1.219124 GGAGGCAGATTGACGAGCA 59.781 57.895 0.00 0.00 0.00 4.26
1401 1498 1.522580 GGGAGGCAGATTGACGAGC 60.523 63.158 0.00 0.00 0.00 5.03
1402 1499 1.227089 CGGGAGGCAGATTGACGAG 60.227 63.158 0.00 0.00 0.00 4.18
1403 1500 2.892640 CGGGAGGCAGATTGACGA 59.107 61.111 0.00 0.00 0.00 4.20
1587 1685 4.116926 CCACACATGTTGGGGCAT 57.883 55.556 15.39 0.00 43.93 4.40
1609 1707 0.746659 GCCGCTTTTAGATTGGCCAT 59.253 50.000 6.09 0.00 39.83 4.40
1610 1708 1.653094 CGCCGCTTTTAGATTGGCCA 61.653 55.000 0.00 0.00 42.76 5.36
1615 1713 0.814010 ATCGCCGCCGCTTTTAGATT 60.814 50.000 0.00 0.00 0.00 2.40
1713 1812 2.885644 CCGAAGACCACATCGCGG 60.886 66.667 6.13 0.00 41.54 6.46
1721 1820 3.950794 GACATGCCGCCGAAGACCA 62.951 63.158 0.00 0.00 0.00 4.02
1770 1870 2.433446 CAAGCAGTCCACCAGGCT 59.567 61.111 0.00 0.00 38.45 4.58
1816 1918 1.204941 GACCACCACCACTAGCTACAG 59.795 57.143 0.00 0.00 0.00 2.74
2018 2120 2.270205 CCCGGAGCAGCATGAGTT 59.730 61.111 0.73 0.00 39.69 3.01
2023 2125 3.338250 TTTCCCCCGGAGCAGCAT 61.338 61.111 0.73 0.00 31.21 3.79
2097 2199 0.958091 CCACAAACGATGCTCCCAAA 59.042 50.000 0.00 0.00 0.00 3.28
2251 2353 5.009410 CACAGCTTGAAGTCTTTGGAAGATT 59.991 40.000 0.00 0.00 40.18 2.40
2296 2398 3.632643 TGATACACATCAGCACCATGT 57.367 42.857 0.00 0.00 36.22 3.21
2308 2410 2.745281 TCACGATCGTCACTGATACACA 59.255 45.455 19.84 0.00 0.00 3.72
2320 2422 1.154207 CTGAGCACGTCACGATCGT 60.154 57.895 16.60 16.60 42.33 3.73
2324 2426 0.526211 AATAGCTGAGCACGTCACGA 59.474 50.000 2.91 0.00 0.00 4.35
2341 2443 2.359850 TTCTCCCTGCGCGCAAAT 60.360 55.556 35.50 0.00 0.00 2.32
2422 2525 2.166459 CACCGCTCCATCTTCAGAACTA 59.834 50.000 0.00 0.00 0.00 2.24
2463 2572 1.364171 GTCCGGCGTGCTCTCATAT 59.636 57.895 6.01 0.00 0.00 1.78
2621 2733 0.893447 ACTAAAGCCGCCGTCTAAGT 59.107 50.000 0.00 0.00 0.00 2.24
2704 2816 3.473647 CCGGCCTCTGCATCTGGA 61.474 66.667 0.00 0.00 40.13 3.86
2768 2884 6.385759 TGATCCTAGGGTAACTCTGCATTTTA 59.614 38.462 9.46 0.00 0.00 1.52
2839 2955 2.767960 AGATGGTCCATTTGCATTTCCC 59.232 45.455 5.65 0.00 0.00 3.97
2941 3057 6.490040 CCACTCTAATTTCACCTCTTCCAAAA 59.510 38.462 0.00 0.00 0.00 2.44
2951 3067 3.017442 GCCCTTCCACTCTAATTTCACC 58.983 50.000 0.00 0.00 0.00 4.02
3030 3146 4.883585 TCATGTAACAATGATCTTGGCTCC 59.116 41.667 8.95 0.00 31.58 4.70
3094 3210 5.826643 ACAGAGCCAAAATAATTCTACCCA 58.173 37.500 0.00 0.00 0.00 4.51
3114 3233 7.250569 CCTAGTTGGTACATTTGCATAAACAG 58.749 38.462 0.00 0.00 39.30 3.16
3180 3299 4.022762 CACTACCTCTACCTGATGATTCGG 60.023 50.000 0.00 0.00 0.00 4.30
3182 3301 5.737635 GCACACTACCTCTACCTGATGATTC 60.738 48.000 0.00 0.00 0.00 2.52
3288 3767 9.826574 GGACACATATTTACTAGAACCACAATA 57.173 33.333 0.00 0.00 0.00 1.90
3291 3770 7.490657 AGGACACATATTTACTAGAACCACA 57.509 36.000 0.00 0.00 0.00 4.17
3515 4000 6.710295 CCCTTATACCGAACATTCATTCATCA 59.290 38.462 0.00 0.00 0.00 3.07
3531 4017 4.790718 ACCAGGTGATTTCCCTTATACC 57.209 45.455 0.00 0.00 0.00 2.73
3535 4021 9.196139 CATATTAAAACCAGGTGATTTCCCTTA 57.804 33.333 0.00 0.00 0.00 2.69
3674 4171 2.216898 GCAGCTTATTCCAAGAGCGAT 58.783 47.619 0.00 0.00 41.19 4.58
3735 4232 6.872628 TCGGACGTATAGAAATGTAGACAT 57.127 37.500 0.00 0.00 38.41 3.06
3753 4250 4.385358 ACATGGCCATTTAATTTCGGAC 57.615 40.909 17.92 0.00 0.00 4.79
3867 4364 9.131791 ACAAGCATACTTCTAAAAGGAAAGAAA 57.868 29.630 0.00 0.00 36.78 2.52
3888 4385 5.465056 GCTCTTCTGTGATAGGAATACAAGC 59.535 44.000 0.00 0.00 0.00 4.01
3906 4403 3.434984 GTGATCTGGTTCTTGTGCTCTTC 59.565 47.826 0.00 0.00 0.00 2.87
3938 4435 0.522180 ATCGTGTGAGACCGAGTGTC 59.478 55.000 0.00 0.00 44.82 3.67
3946 4443 3.246619 GTCCAGAAAGATCGTGTGAGAC 58.753 50.000 0.00 2.08 0.00 3.36
3947 4444 2.890945 TGTCCAGAAAGATCGTGTGAGA 59.109 45.455 0.00 0.00 0.00 3.27
3977 4474 0.611714 ACGTACCAATGTCCTGGGAC 59.388 55.000 12.43 12.43 45.72 4.46
3991 4488 2.607180 GGAGGAGAAGTCTCGTACGTAC 59.393 54.545 15.90 15.90 43.76 3.67
3992 4489 2.499289 AGGAGGAGAAGTCTCGTACGTA 59.501 50.000 16.05 1.79 44.24 3.57
3993 4490 1.278699 AGGAGGAGAAGTCTCGTACGT 59.721 52.381 16.05 0.00 44.24 3.57
3994 4491 2.027003 AGGAGGAGAAGTCTCGTACG 57.973 55.000 9.53 9.53 44.24 3.67
4004 4501 5.652324 ACTGTAGTAGGAAAAGGAGGAGAA 58.348 41.667 0.00 0.00 0.00 2.87


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.