Multiple sequence alignment - TraesCS3A01G512800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G512800 chr3A 100.000 3457 0 0 1 3457 732405533 732402077 0.000000e+00 6348
1 TraesCS3A01G512800 chr3A 81.215 362 41 11 747 1108 728925280 728924946 2.050000e-67 267
2 TraesCS3A01G512800 chr3B 93.458 2308 123 12 967 3256 810194249 810191952 0.000000e+00 3400
3 TraesCS3A01G512800 chr3B 85.046 1411 164 30 744 2150 806058708 806057341 0.000000e+00 1393
4 TraesCS3A01G512800 chr3B 85.128 585 38 27 399 971 810195376 810194829 1.400000e-153 553
5 TraesCS3A01G512800 chr7A 87.067 2080 183 45 573 2601 566909975 566912019 0.000000e+00 2272
6 TraesCS3A01G512800 chr7A 86.804 2084 187 45 488 2520 566989154 566991200 0.000000e+00 2244
7 TraesCS3A01G512800 chr7A 77.778 486 55 33 465 927 566790028 566790483 2.060000e-62 250
8 TraesCS3A01G512800 chr7D 86.498 2133 193 55 465 2544 500775684 500777774 0.000000e+00 2255
9 TraesCS3A01G512800 chr7D 89.086 1576 136 17 992 2560 113583066 113584612 0.000000e+00 1925
10 TraesCS3A01G512800 chr7D 82.424 165 14 10 772 927 113582891 113583049 2.800000e-26 130
11 TraesCS3A01G512800 chrUn 86.466 2091 183 35 486 2544 86611676 86613698 0.000000e+00 2202
12 TraesCS3A01G512800 chr7B 90.746 1621 134 8 987 2604 664398864 664397257 0.000000e+00 2148
13 TraesCS3A01G512800 chr7B 84.704 2177 216 67 465 2601 528873373 528875472 0.000000e+00 2067
14 TraesCS3A01G512800 chr7B 88.867 1518 142 16 1049 2560 73176689 73178185 0.000000e+00 1842
15 TraesCS3A01G512800 chr7B 91.626 1242 92 6 1585 2820 528876727 528877962 0.000000e+00 1707
16 TraesCS3A01G512800 chr7B 81.542 1479 236 27 998 2457 529823546 529825006 0.000000e+00 1184
17 TraesCS3A01G512800 chr7B 83.667 600 39 24 2819 3382 528878123 528878699 8.560000e-141 510
18 TraesCS3A01G512800 chr7B 76.621 509 49 41 465 927 73175956 73176440 2.090000e-52 217
19 TraesCS3A01G512800 chr7B 83.000 200 13 10 747 937 664399068 664398881 9.930000e-36 161
20 TraesCS3A01G512800 chr3D 83.578 1705 182 52 486 2150 598726604 598724958 0.000000e+00 1507


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G512800 chr3A 732402077 732405533 3456 True 6348.0 6348 100.000000 1 3457 1 chr3A.!!$R2 3456
1 TraesCS3A01G512800 chr3B 810191952 810195376 3424 True 1976.5 3400 89.293000 399 3256 2 chr3B.!!$R2 2857
2 TraesCS3A01G512800 chr3B 806057341 806058708 1367 True 1393.0 1393 85.046000 744 2150 1 chr3B.!!$R1 1406
3 TraesCS3A01G512800 chr7A 566909975 566912019 2044 False 2272.0 2272 87.067000 573 2601 1 chr7A.!!$F2 2028
4 TraesCS3A01G512800 chr7A 566989154 566991200 2046 False 2244.0 2244 86.804000 488 2520 1 chr7A.!!$F3 2032
5 TraesCS3A01G512800 chr7D 500775684 500777774 2090 False 2255.0 2255 86.498000 465 2544 1 chr7D.!!$F1 2079
6 TraesCS3A01G512800 chr7D 113582891 113584612 1721 False 1027.5 1925 85.755000 772 2560 2 chr7D.!!$F2 1788
7 TraesCS3A01G512800 chrUn 86611676 86613698 2022 False 2202.0 2202 86.466000 486 2544 1 chrUn.!!$F1 2058
8 TraesCS3A01G512800 chr7B 528873373 528878699 5326 False 1428.0 2067 86.665667 465 3382 3 chr7B.!!$F3 2917
9 TraesCS3A01G512800 chr7B 529823546 529825006 1460 False 1184.0 1184 81.542000 998 2457 1 chr7B.!!$F1 1459
10 TraesCS3A01G512800 chr7B 664397257 664399068 1811 True 1154.5 2148 86.873000 747 2604 2 chr7B.!!$R1 1857
11 TraesCS3A01G512800 chr7B 73175956 73178185 2229 False 1029.5 1842 82.744000 465 2560 2 chr7B.!!$F2 2095
12 TraesCS3A01G512800 chr3D 598724958 598726604 1646 True 1507.0 1507 83.578000 486 2150 1 chr3D.!!$R1 1664

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
181 182 0.031585 CGAGAAGACGTTGGTGACCA 59.968 55.0 0.0 0.0 0.0 4.02 F
336 337 0.170561 CCTCTACCTCGTCAACACGG 59.829 60.0 0.0 0.0 46.7 4.94 F
341 342 0.176219 ACCTCGTCAACACGGACAAA 59.824 50.0 0.0 0.0 46.7 2.83 F
834 987 0.179029 CTGGTCCGTGGTTCCAACTT 60.179 55.0 0.0 0.0 0.0 2.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1874 5162 0.178990 ACCTTTGTCACCCCAAGCTC 60.179 55.000 0.00 0.0 0.00 4.09 R
2320 5621 1.344763 ACACAGTGTACAGAAGCTCCC 59.655 52.381 3.69 0.0 0.00 4.30 R
2375 5676 2.191908 GCATGGGTCGGGTGCATA 59.808 61.111 0.00 0.0 38.68 3.14 R
2652 5960 2.685850 AGAAAAAGGTATCGGTCCCG 57.314 50.000 0.00 0.0 41.35 5.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 8.676454 TTCGTAAAATTTTATTTCATGACGGG 57.324 30.769 13.54 0.00 0.00 5.28
31 32 6.748198 TCGTAAAATTTTATTTCATGACGGGC 59.252 34.615 13.54 0.00 0.00 6.13
32 33 6.020201 CGTAAAATTTTATTTCATGACGGGCC 60.020 38.462 13.54 0.00 0.00 5.80
33 34 5.413309 AAATTTTATTTCATGACGGGCCA 57.587 34.783 4.39 0.00 0.00 5.36
34 35 5.413309 AATTTTATTTCATGACGGGCCAA 57.587 34.783 4.39 0.00 0.00 4.52
35 36 4.448537 TTTTATTTCATGACGGGCCAAG 57.551 40.909 4.39 0.00 0.00 3.61
36 37 3.358111 TTATTTCATGACGGGCCAAGA 57.642 42.857 4.39 0.00 0.00 3.02
37 38 2.214376 ATTTCATGACGGGCCAAGAA 57.786 45.000 4.39 0.00 0.00 2.52
38 39 2.214376 TTTCATGACGGGCCAAGAAT 57.786 45.000 4.39 0.00 0.00 2.40
39 40 3.358111 TTTCATGACGGGCCAAGAATA 57.642 42.857 4.39 0.00 0.00 1.75
40 41 3.576078 TTCATGACGGGCCAAGAATAT 57.424 42.857 4.39 0.00 0.00 1.28
41 42 3.576078 TCATGACGGGCCAAGAATATT 57.424 42.857 4.39 0.00 0.00 1.28
42 43 3.213506 TCATGACGGGCCAAGAATATTG 58.786 45.455 4.39 0.00 0.00 1.90
43 44 3.118075 TCATGACGGGCCAAGAATATTGA 60.118 43.478 4.39 0.00 0.00 2.57
44 45 3.576078 TGACGGGCCAAGAATATTGAT 57.424 42.857 4.39 0.00 0.00 2.57
45 46 3.897239 TGACGGGCCAAGAATATTGATT 58.103 40.909 4.39 0.00 0.00 2.57
46 47 3.882888 TGACGGGCCAAGAATATTGATTC 59.117 43.478 4.39 0.00 41.69 2.52
77 78 8.688747 ATTAGTGGGTATAGATATAGGTACGC 57.311 38.462 0.00 0.00 0.00 4.42
78 79 6.070951 AGTGGGTATAGATATAGGTACGCA 57.929 41.667 0.00 0.00 37.57 5.24
79 80 6.670617 AGTGGGTATAGATATAGGTACGCAT 58.329 40.000 11.27 0.00 40.50 4.73
80 81 6.546403 AGTGGGTATAGATATAGGTACGCATG 59.454 42.308 11.27 0.00 40.50 4.06
81 82 5.301045 TGGGTATAGATATAGGTACGCATGC 59.699 44.000 7.91 7.91 35.81 4.06
82 83 5.535406 GGGTATAGATATAGGTACGCATGCT 59.465 44.000 17.13 5.50 32.31 3.79
83 84 6.040616 GGGTATAGATATAGGTACGCATGCTT 59.959 42.308 17.13 9.37 32.31 3.91
84 85 6.918569 GGTATAGATATAGGTACGCATGCTTG 59.081 42.308 17.13 3.27 0.00 4.01
85 86 4.873746 AGATATAGGTACGCATGCTTGT 57.126 40.909 17.13 9.84 0.00 3.16
86 87 4.560128 AGATATAGGTACGCATGCTTGTG 58.440 43.478 17.13 11.29 39.33 3.33
87 88 1.299541 ATAGGTACGCATGCTTGTGC 58.700 50.000 17.13 10.54 41.65 4.57
110 111 9.508567 GTGCATATTCTAACAAGAAAATCTTCC 57.491 33.333 0.00 0.00 33.78 3.46
111 112 9.466497 TGCATATTCTAACAAGAAAATCTTCCT 57.534 29.630 0.00 0.00 33.78 3.36
112 113 9.943163 GCATATTCTAACAAGAAAATCTTCCTC 57.057 33.333 0.00 0.00 33.78 3.71
115 116 8.800370 ATTCTAACAAGAAAATCTTCCTCCTC 57.200 34.615 0.00 0.00 33.78 3.71
116 117 7.316393 TCTAACAAGAAAATCTTCCTCCTCA 57.684 36.000 0.00 0.00 33.78 3.86
117 118 7.922382 TCTAACAAGAAAATCTTCCTCCTCAT 58.078 34.615 0.00 0.00 33.78 2.90
118 119 8.043710 TCTAACAAGAAAATCTTCCTCCTCATC 58.956 37.037 0.00 0.00 33.78 2.92
119 120 6.131972 ACAAGAAAATCTTCCTCCTCATCA 57.868 37.500 0.00 0.00 33.78 3.07
120 121 5.942826 ACAAGAAAATCTTCCTCCTCATCAC 59.057 40.000 0.00 0.00 33.78 3.06
121 122 6.179040 CAAGAAAATCTTCCTCCTCATCACT 58.821 40.000 0.00 0.00 33.78 3.41
122 123 5.743117 AGAAAATCTTCCTCCTCATCACTG 58.257 41.667 0.00 0.00 31.28 3.66
123 124 3.557228 AATCTTCCTCCTCATCACTGC 57.443 47.619 0.00 0.00 0.00 4.40
124 125 1.198713 TCTTCCTCCTCATCACTGCC 58.801 55.000 0.00 0.00 0.00 4.85
125 126 0.179089 CTTCCTCCTCATCACTGCCG 60.179 60.000 0.00 0.00 0.00 5.69
126 127 1.617018 TTCCTCCTCATCACTGCCGG 61.617 60.000 0.00 0.00 0.00 6.13
127 128 2.060383 CCTCCTCATCACTGCCGGA 61.060 63.158 5.05 0.00 0.00 5.14
128 129 1.406065 CCTCCTCATCACTGCCGGAT 61.406 60.000 5.05 0.00 0.00 4.18
129 130 0.033228 CTCCTCATCACTGCCGGATC 59.967 60.000 5.05 0.00 0.00 3.36
130 131 1.070445 CCTCATCACTGCCGGATCC 59.930 63.158 5.05 0.00 0.00 3.36
131 132 1.689243 CCTCATCACTGCCGGATCCA 61.689 60.000 13.41 0.00 0.00 3.41
132 133 0.395686 CTCATCACTGCCGGATCCAT 59.604 55.000 13.41 0.00 0.00 3.41
133 134 0.839277 TCATCACTGCCGGATCCATT 59.161 50.000 13.41 0.00 0.00 3.16
134 135 2.037641 CTCATCACTGCCGGATCCATTA 59.962 50.000 13.41 0.00 0.00 1.90
135 136 2.437651 TCATCACTGCCGGATCCATTAA 59.562 45.455 13.41 0.00 0.00 1.40
136 137 3.118075 TCATCACTGCCGGATCCATTAAA 60.118 43.478 13.41 0.00 0.00 1.52
137 138 3.358111 TCACTGCCGGATCCATTAAAA 57.642 42.857 13.41 0.00 0.00 1.52
138 139 3.013921 TCACTGCCGGATCCATTAAAAC 58.986 45.455 13.41 0.00 0.00 2.43
139 140 3.016736 CACTGCCGGATCCATTAAAACT 58.983 45.455 13.41 0.00 0.00 2.66
140 141 3.443681 CACTGCCGGATCCATTAAAACTT 59.556 43.478 13.41 0.00 0.00 2.66
141 142 3.694566 ACTGCCGGATCCATTAAAACTTC 59.305 43.478 13.41 0.00 0.00 3.01
142 143 2.680841 TGCCGGATCCATTAAAACTTCG 59.319 45.455 13.41 0.00 0.00 3.79
143 144 2.940410 GCCGGATCCATTAAAACTTCGA 59.060 45.455 13.41 0.00 0.00 3.71
144 145 3.375922 GCCGGATCCATTAAAACTTCGAA 59.624 43.478 13.41 0.00 0.00 3.71
145 146 4.036380 GCCGGATCCATTAAAACTTCGAAT 59.964 41.667 13.41 0.00 0.00 3.34
146 147 5.510671 CCGGATCCATTAAAACTTCGAATG 58.489 41.667 13.41 0.00 0.00 2.67
147 148 5.065988 CCGGATCCATTAAAACTTCGAATGT 59.934 40.000 13.41 0.00 0.00 2.71
148 149 5.965334 CGGATCCATTAAAACTTCGAATGTG 59.035 40.000 13.41 0.00 0.00 3.21
149 150 6.265577 GGATCCATTAAAACTTCGAATGTGG 58.734 40.000 6.95 0.21 0.00 4.17
150 151 5.637006 TCCATTAAAACTTCGAATGTGGG 57.363 39.130 0.00 0.00 0.00 4.61
151 152 4.461081 TCCATTAAAACTTCGAATGTGGGG 59.539 41.667 0.00 0.00 0.00 4.96
152 153 4.219725 CCATTAAAACTTCGAATGTGGGGT 59.780 41.667 0.00 0.00 0.00 4.95
153 154 5.279256 CCATTAAAACTTCGAATGTGGGGTT 60.279 40.000 0.00 0.00 0.00 4.11
154 155 6.071840 CCATTAAAACTTCGAATGTGGGGTTA 60.072 38.462 0.00 0.00 0.00 2.85
155 156 6.563222 TTAAAACTTCGAATGTGGGGTTAG 57.437 37.500 0.00 0.00 0.00 2.34
156 157 2.781681 ACTTCGAATGTGGGGTTAGG 57.218 50.000 0.00 0.00 0.00 2.69
157 158 1.982958 ACTTCGAATGTGGGGTTAGGT 59.017 47.619 0.00 0.00 0.00 3.08
158 159 2.374170 ACTTCGAATGTGGGGTTAGGTT 59.626 45.455 0.00 0.00 0.00 3.50
159 160 3.583966 ACTTCGAATGTGGGGTTAGGTTA 59.416 43.478 0.00 0.00 0.00 2.85
160 161 4.226620 ACTTCGAATGTGGGGTTAGGTTAT 59.773 41.667 0.00 0.00 0.00 1.89
161 162 4.145365 TCGAATGTGGGGTTAGGTTATG 57.855 45.455 0.00 0.00 0.00 1.90
162 163 2.616842 CGAATGTGGGGTTAGGTTATGC 59.383 50.000 0.00 0.00 0.00 3.14
163 164 2.341846 ATGTGGGGTTAGGTTATGCG 57.658 50.000 0.00 0.00 0.00 4.73
164 165 1.277579 TGTGGGGTTAGGTTATGCGA 58.722 50.000 0.00 0.00 0.00 5.10
165 166 1.208535 TGTGGGGTTAGGTTATGCGAG 59.791 52.381 0.00 0.00 0.00 5.03
166 167 1.483415 GTGGGGTTAGGTTATGCGAGA 59.517 52.381 0.00 0.00 0.00 4.04
167 168 2.093341 GTGGGGTTAGGTTATGCGAGAA 60.093 50.000 0.00 0.00 0.00 2.87
168 169 2.169769 TGGGGTTAGGTTATGCGAGAAG 59.830 50.000 0.00 0.00 0.00 2.85
169 170 2.433239 GGGGTTAGGTTATGCGAGAAGA 59.567 50.000 0.00 0.00 0.00 2.87
170 171 3.455327 GGGTTAGGTTATGCGAGAAGAC 58.545 50.000 0.00 0.00 0.00 3.01
171 172 3.114065 GGTTAGGTTATGCGAGAAGACG 58.886 50.000 0.00 0.00 0.00 4.18
172 173 3.428589 GGTTAGGTTATGCGAGAAGACGT 60.429 47.826 0.00 0.00 35.59 4.34
173 174 4.171754 GTTAGGTTATGCGAGAAGACGTT 58.828 43.478 0.00 0.00 35.59 3.99
174 175 2.607187 AGGTTATGCGAGAAGACGTTG 58.393 47.619 0.00 0.00 35.59 4.10
175 176 1.659098 GGTTATGCGAGAAGACGTTGG 59.341 52.381 0.00 0.00 35.59 3.77
176 177 2.334838 GTTATGCGAGAAGACGTTGGT 58.665 47.619 0.00 0.00 35.59 3.67
177 178 1.990799 TATGCGAGAAGACGTTGGTG 58.009 50.000 0.00 0.00 35.59 4.17
178 179 0.317160 ATGCGAGAAGACGTTGGTGA 59.683 50.000 0.00 0.00 35.59 4.02
179 180 0.596600 TGCGAGAAGACGTTGGTGAC 60.597 55.000 0.00 0.00 35.59 3.67
180 181 1.282930 GCGAGAAGACGTTGGTGACC 61.283 60.000 0.00 0.00 35.59 4.02
181 182 0.031585 CGAGAAGACGTTGGTGACCA 59.968 55.000 0.00 0.00 0.00 4.02
182 183 1.499049 GAGAAGACGTTGGTGACCAC 58.501 55.000 2.46 0.00 30.78 4.16
196 197 4.582701 GTGACCACCATCTAGAGATCTG 57.417 50.000 0.00 0.00 31.21 2.90
197 198 4.211125 GTGACCACCATCTAGAGATCTGA 58.789 47.826 0.00 0.00 31.21 3.27
198 199 4.832266 GTGACCACCATCTAGAGATCTGAT 59.168 45.833 0.00 0.00 31.21 2.90
199 200 5.304101 GTGACCACCATCTAGAGATCTGATT 59.696 44.000 0.00 0.00 31.21 2.57
200 201 5.303845 TGACCACCATCTAGAGATCTGATTG 59.696 44.000 0.00 0.00 31.21 2.67
201 202 5.215069 ACCACCATCTAGAGATCTGATTGT 58.785 41.667 0.00 0.00 31.21 2.71
202 203 5.664908 ACCACCATCTAGAGATCTGATTGTT 59.335 40.000 0.00 0.00 31.21 2.83
203 204 5.990386 CCACCATCTAGAGATCTGATTGTTG 59.010 44.000 0.00 0.00 31.21 3.33
204 205 6.407865 CCACCATCTAGAGATCTGATTGTTGT 60.408 42.308 0.00 0.00 31.21 3.32
205 206 6.700960 CACCATCTAGAGATCTGATTGTTGTC 59.299 42.308 0.00 0.00 31.21 3.18
206 207 6.183360 ACCATCTAGAGATCTGATTGTTGTCC 60.183 42.308 0.00 0.00 31.21 4.02
207 208 6.183360 CCATCTAGAGATCTGATTGTTGTCCA 60.183 42.308 0.00 0.00 31.21 4.02
208 209 6.462552 TCTAGAGATCTGATTGTTGTCCAG 57.537 41.667 0.00 0.00 0.00 3.86
209 210 6.190587 TCTAGAGATCTGATTGTTGTCCAGA 58.809 40.000 0.00 0.00 40.68 3.86
210 211 5.341872 AGAGATCTGATTGTTGTCCAGAG 57.658 43.478 0.00 0.00 39.89 3.35
211 212 5.022122 AGAGATCTGATTGTTGTCCAGAGA 58.978 41.667 0.00 0.00 39.89 3.10
212 213 5.483231 AGAGATCTGATTGTTGTCCAGAGAA 59.517 40.000 0.00 0.00 39.89 2.87
213 214 6.013898 AGAGATCTGATTGTTGTCCAGAGAAA 60.014 38.462 0.00 0.00 39.89 2.52
214 215 6.537355 AGATCTGATTGTTGTCCAGAGAAAA 58.463 36.000 0.00 0.00 39.89 2.29
215 216 6.654161 AGATCTGATTGTTGTCCAGAGAAAAG 59.346 38.462 0.00 0.00 39.89 2.27
216 217 5.065914 TCTGATTGTTGTCCAGAGAAAAGG 58.934 41.667 0.00 0.00 33.50 3.11
217 218 5.047566 TGATTGTTGTCCAGAGAAAAGGA 57.952 39.130 0.00 0.00 0.00 3.36
222 223 2.371910 GTCCAGAGAAAAGGACGAGG 57.628 55.000 0.00 0.00 44.23 4.63
223 224 1.893801 GTCCAGAGAAAAGGACGAGGA 59.106 52.381 0.00 0.00 44.23 3.71
224 225 2.094442 GTCCAGAGAAAAGGACGAGGAG 60.094 54.545 0.00 0.00 44.23 3.69
225 226 2.171840 CCAGAGAAAAGGACGAGGAGA 58.828 52.381 0.00 0.00 0.00 3.71
226 227 2.563179 CCAGAGAAAAGGACGAGGAGAA 59.437 50.000 0.00 0.00 0.00 2.87
227 228 3.367910 CCAGAGAAAAGGACGAGGAGAAG 60.368 52.174 0.00 0.00 0.00 2.85
228 229 3.508012 CAGAGAAAAGGACGAGGAGAAGA 59.492 47.826 0.00 0.00 0.00 2.87
229 230 4.021894 CAGAGAAAAGGACGAGGAGAAGAA 60.022 45.833 0.00 0.00 0.00 2.52
230 231 4.775253 AGAGAAAAGGACGAGGAGAAGAAT 59.225 41.667 0.00 0.00 0.00 2.40
231 232 5.247337 AGAGAAAAGGACGAGGAGAAGAATT 59.753 40.000 0.00 0.00 0.00 2.17
232 233 5.870706 AGAAAAGGACGAGGAGAAGAATTT 58.129 37.500 0.00 0.00 0.00 1.82
233 234 5.703130 AGAAAAGGACGAGGAGAAGAATTTG 59.297 40.000 0.00 0.00 0.00 2.32
234 235 4.891992 AAGGACGAGGAGAAGAATTTGA 57.108 40.909 0.00 0.00 0.00 2.69
235 236 5.428184 AAGGACGAGGAGAAGAATTTGAT 57.572 39.130 0.00 0.00 0.00 2.57
236 237 6.546428 AAGGACGAGGAGAAGAATTTGATA 57.454 37.500 0.00 0.00 0.00 2.15
237 238 6.739331 AGGACGAGGAGAAGAATTTGATAT 57.261 37.500 0.00 0.00 0.00 1.63
238 239 7.130681 AGGACGAGGAGAAGAATTTGATATT 57.869 36.000 0.00 0.00 0.00 1.28
239 240 8.251383 AGGACGAGGAGAAGAATTTGATATTA 57.749 34.615 0.00 0.00 0.00 0.98
240 241 8.875168 AGGACGAGGAGAAGAATTTGATATTAT 58.125 33.333 0.00 0.00 0.00 1.28
241 242 9.145865 GGACGAGGAGAAGAATTTGATATTATC 57.854 37.037 0.00 0.00 0.00 1.75
242 243 9.698309 GACGAGGAGAAGAATTTGATATTATCA 57.302 33.333 2.14 2.14 37.55 2.15
253 254 5.412526 TTGATATTATCAAAACGACCGCC 57.587 39.130 15.16 0.00 45.57 6.13
254 255 4.443621 TGATATTATCAAAACGACCGCCA 58.556 39.130 3.84 0.00 36.11 5.69
255 256 4.271533 TGATATTATCAAAACGACCGCCAC 59.728 41.667 3.84 0.00 36.11 5.01
256 257 1.158434 TTATCAAAACGACCGCCACC 58.842 50.000 0.00 0.00 0.00 4.61
257 258 0.674269 TATCAAAACGACCGCCACCC 60.674 55.000 0.00 0.00 0.00 4.61
258 259 3.666253 CAAAACGACCGCCACCCC 61.666 66.667 0.00 0.00 0.00 4.95
259 260 4.192453 AAAACGACCGCCACCCCA 62.192 61.111 0.00 0.00 0.00 4.96
260 261 4.636435 AAACGACCGCCACCCCAG 62.636 66.667 0.00 0.00 0.00 4.45
263 264 3.697747 CGACCGCCACCCCAGTAA 61.698 66.667 0.00 0.00 0.00 2.24
264 265 2.995547 GACCGCCACCCCAGTAAT 59.004 61.111 0.00 0.00 0.00 1.89
265 266 1.451387 GACCGCCACCCCAGTAATG 60.451 63.158 0.00 0.00 0.00 1.90
266 267 2.828549 CCGCCACCCCAGTAATGC 60.829 66.667 0.00 0.00 0.00 3.56
267 268 2.045438 CGCCACCCCAGTAATGCA 60.045 61.111 0.00 0.00 0.00 3.96
268 269 2.114670 CGCCACCCCAGTAATGCAG 61.115 63.158 0.00 0.00 0.00 4.41
269 270 1.302949 GCCACCCCAGTAATGCAGA 59.697 57.895 0.00 0.00 0.00 4.26
270 271 0.749454 GCCACCCCAGTAATGCAGAG 60.749 60.000 0.00 0.00 0.00 3.35
271 272 0.620556 CCACCCCAGTAATGCAGAGT 59.379 55.000 0.00 0.00 0.00 3.24
272 273 1.679944 CCACCCCAGTAATGCAGAGTG 60.680 57.143 0.00 0.00 0.00 3.51
273 274 1.003580 CACCCCAGTAATGCAGAGTGT 59.996 52.381 0.00 0.00 0.00 3.55
274 275 1.279271 ACCCCAGTAATGCAGAGTGTC 59.721 52.381 0.00 0.00 0.00 3.67
275 276 1.556911 CCCCAGTAATGCAGAGTGTCT 59.443 52.381 0.00 0.00 0.00 3.41
276 277 2.766263 CCCCAGTAATGCAGAGTGTCTA 59.234 50.000 0.00 0.00 0.00 2.59
277 278 3.197766 CCCCAGTAATGCAGAGTGTCTAA 59.802 47.826 0.00 0.00 0.00 2.10
278 279 4.141620 CCCCAGTAATGCAGAGTGTCTAAT 60.142 45.833 0.00 0.00 0.00 1.73
279 280 4.813161 CCCAGTAATGCAGAGTGTCTAATG 59.187 45.833 0.00 0.00 0.00 1.90
280 281 4.813161 CCAGTAATGCAGAGTGTCTAATGG 59.187 45.833 0.00 0.00 0.00 3.16
281 282 4.813161 CAGTAATGCAGAGTGTCTAATGGG 59.187 45.833 0.00 0.00 0.00 4.00
282 283 4.716784 AGTAATGCAGAGTGTCTAATGGGA 59.283 41.667 0.00 0.00 0.00 4.37
283 284 4.785346 AATGCAGAGTGTCTAATGGGAT 57.215 40.909 0.00 0.00 0.00 3.85
284 285 3.548745 TGCAGAGTGTCTAATGGGATG 57.451 47.619 0.00 0.00 0.00 3.51
285 286 3.106827 TGCAGAGTGTCTAATGGGATGA 58.893 45.455 0.00 0.00 0.00 2.92
286 287 3.118629 TGCAGAGTGTCTAATGGGATGAC 60.119 47.826 0.00 0.00 0.00 3.06
287 288 3.742640 GCAGAGTGTCTAATGGGATGACC 60.743 52.174 0.00 0.00 40.81 4.02
288 289 3.708631 CAGAGTGTCTAATGGGATGACCT 59.291 47.826 0.00 0.00 41.11 3.85
289 290 4.895889 CAGAGTGTCTAATGGGATGACCTA 59.104 45.833 0.00 0.00 41.11 3.08
290 291 5.541868 CAGAGTGTCTAATGGGATGACCTAT 59.458 44.000 0.00 0.00 41.11 2.57
291 292 6.042552 CAGAGTGTCTAATGGGATGACCTATT 59.957 42.308 0.00 0.00 46.48 1.73
292 293 7.233553 CAGAGTGTCTAATGGGATGACCTATTA 59.766 40.741 0.00 0.00 43.79 0.98
298 299 5.568620 AATGGGATGACCTATTAGACACC 57.431 43.478 0.00 0.00 43.79 4.16
299 300 3.314693 TGGGATGACCTATTAGACACCC 58.685 50.000 0.00 0.00 41.11 4.61
300 301 3.051341 TGGGATGACCTATTAGACACCCT 60.051 47.826 0.00 0.00 41.11 4.34
301 302 3.325135 GGGATGACCTATTAGACACCCTG 59.675 52.174 0.00 0.00 35.85 4.45
302 303 4.223953 GGATGACCTATTAGACACCCTGA 58.776 47.826 0.00 0.00 0.00 3.86
303 304 4.039366 GGATGACCTATTAGACACCCTGAC 59.961 50.000 0.00 0.00 0.00 3.51
304 305 4.055710 TGACCTATTAGACACCCTGACA 57.944 45.455 0.00 0.00 0.00 3.58
305 306 4.620723 TGACCTATTAGACACCCTGACAT 58.379 43.478 0.00 0.00 0.00 3.06
306 307 4.405680 TGACCTATTAGACACCCTGACATG 59.594 45.833 0.00 0.00 0.00 3.21
307 308 4.620723 ACCTATTAGACACCCTGACATGA 58.379 43.478 0.00 0.00 0.00 3.07
308 309 5.219739 ACCTATTAGACACCCTGACATGAT 58.780 41.667 0.00 0.00 0.00 2.45
309 310 5.305644 ACCTATTAGACACCCTGACATGATC 59.694 44.000 0.00 0.00 0.00 2.92
310 311 5.305386 CCTATTAGACACCCTGACATGATCA 59.695 44.000 0.00 0.00 35.45 2.92
311 312 5.698741 ATTAGACACCCTGACATGATCAA 57.301 39.130 0.00 0.00 36.69 2.57
312 313 5.497464 TTAGACACCCTGACATGATCAAA 57.503 39.130 0.00 0.00 36.69 2.69
313 314 4.371624 AGACACCCTGACATGATCAAAA 57.628 40.909 0.00 0.00 36.69 2.44
314 315 4.074970 AGACACCCTGACATGATCAAAAC 58.925 43.478 0.00 0.00 36.69 2.43
315 316 2.813754 ACACCCTGACATGATCAAAACG 59.186 45.455 0.00 0.00 36.69 3.60
316 317 3.073678 CACCCTGACATGATCAAAACGA 58.926 45.455 0.00 0.00 36.69 3.85
317 318 3.074412 ACCCTGACATGATCAAAACGAC 58.926 45.455 0.00 0.00 36.69 4.34
318 319 2.420022 CCCTGACATGATCAAAACGACC 59.580 50.000 0.00 0.00 36.69 4.79
319 320 3.338249 CCTGACATGATCAAAACGACCT 58.662 45.455 0.00 0.00 36.69 3.85
320 321 3.372206 CCTGACATGATCAAAACGACCTC 59.628 47.826 0.00 0.00 36.69 3.85
321 322 4.248859 CTGACATGATCAAAACGACCTCT 58.751 43.478 0.00 0.00 36.69 3.69
322 323 5.400066 TGACATGATCAAAACGACCTCTA 57.600 39.130 0.00 0.00 33.02 2.43
323 324 5.168569 TGACATGATCAAAACGACCTCTAC 58.831 41.667 0.00 0.00 33.02 2.59
324 325 4.504858 ACATGATCAAAACGACCTCTACC 58.495 43.478 0.00 0.00 0.00 3.18
325 326 4.223032 ACATGATCAAAACGACCTCTACCT 59.777 41.667 0.00 0.00 0.00 3.08
326 327 4.451629 TGATCAAAACGACCTCTACCTC 57.548 45.455 0.00 0.00 0.00 3.85
327 328 3.119602 TGATCAAAACGACCTCTACCTCG 60.120 47.826 0.00 0.00 35.96 4.63
328 329 2.233271 TCAAAACGACCTCTACCTCGT 58.767 47.619 0.00 0.00 44.89 4.18
329 330 2.227388 TCAAAACGACCTCTACCTCGTC 59.773 50.000 0.00 0.00 42.21 4.20
330 331 1.901591 AAACGACCTCTACCTCGTCA 58.098 50.000 0.00 0.00 42.21 4.35
331 332 1.901591 AACGACCTCTACCTCGTCAA 58.098 50.000 0.00 0.00 42.21 3.18
332 333 1.163554 ACGACCTCTACCTCGTCAAC 58.836 55.000 0.00 0.00 38.80 3.18
333 334 1.162698 CGACCTCTACCTCGTCAACA 58.837 55.000 0.00 0.00 0.00 3.33
334 335 1.135746 CGACCTCTACCTCGTCAACAC 60.136 57.143 0.00 0.00 0.00 3.32
336 337 0.170561 CCTCTACCTCGTCAACACGG 59.829 60.000 0.00 0.00 46.70 4.94
337 338 1.162698 CTCTACCTCGTCAACACGGA 58.837 55.000 0.00 0.00 46.70 4.69
338 339 0.877071 TCTACCTCGTCAACACGGAC 59.123 55.000 0.00 0.00 46.70 4.79
339 340 0.594602 CTACCTCGTCAACACGGACA 59.405 55.000 0.00 0.00 46.70 4.02
340 341 1.001048 CTACCTCGTCAACACGGACAA 60.001 52.381 0.00 0.00 46.70 3.18
341 342 0.176219 ACCTCGTCAACACGGACAAA 59.824 50.000 0.00 0.00 46.70 2.83
342 343 0.859232 CCTCGTCAACACGGACAAAG 59.141 55.000 0.00 0.00 46.70 2.77
343 344 1.537348 CCTCGTCAACACGGACAAAGA 60.537 52.381 0.00 0.00 46.70 2.52
344 345 1.787155 CTCGTCAACACGGACAAAGAG 59.213 52.381 0.00 0.00 46.70 2.85
345 346 1.406180 TCGTCAACACGGACAAAGAGA 59.594 47.619 0.00 0.00 46.70 3.10
346 347 2.035449 TCGTCAACACGGACAAAGAGAT 59.965 45.455 0.00 0.00 46.70 2.75
347 348 2.800544 CGTCAACACGGACAAAGAGATT 59.199 45.455 0.00 0.00 42.73 2.40
348 349 3.985279 CGTCAACACGGACAAAGAGATTA 59.015 43.478 0.00 0.00 42.73 1.75
349 350 4.446385 CGTCAACACGGACAAAGAGATTAA 59.554 41.667 0.00 0.00 42.73 1.40
350 351 5.611844 CGTCAACACGGACAAAGAGATTAAC 60.612 44.000 0.00 0.00 42.73 2.01
351 352 5.235616 GTCAACACGGACAAAGAGATTAACA 59.764 40.000 0.00 0.00 37.73 2.41
352 353 5.995282 TCAACACGGACAAAGAGATTAACAT 59.005 36.000 0.00 0.00 0.00 2.71
353 354 6.485313 TCAACACGGACAAAGAGATTAACATT 59.515 34.615 0.00 0.00 0.00 2.71
354 355 7.658167 TCAACACGGACAAAGAGATTAACATTA 59.342 33.333 0.00 0.00 0.00 1.90
355 356 7.596749 ACACGGACAAAGAGATTAACATTAG 57.403 36.000 0.00 0.00 0.00 1.73
356 357 7.383687 ACACGGACAAAGAGATTAACATTAGA 58.616 34.615 0.00 0.00 0.00 2.10
357 358 7.331193 ACACGGACAAAGAGATTAACATTAGAC 59.669 37.037 0.00 0.00 0.00 2.59
358 359 7.330946 CACGGACAAAGAGATTAACATTAGACA 59.669 37.037 0.00 0.00 0.00 3.41
359 360 7.331193 ACGGACAAAGAGATTAACATTAGACAC 59.669 37.037 0.00 0.00 0.00 3.67
360 361 7.545965 CGGACAAAGAGATTAACATTAGACACT 59.454 37.037 0.00 0.00 0.00 3.55
361 362 8.874816 GGACAAAGAGATTAACATTAGACACTC 58.125 37.037 0.00 0.00 0.00 3.51
362 363 9.646427 GACAAAGAGATTAACATTAGACACTCT 57.354 33.333 0.00 0.00 35.44 3.24
363 364 9.646427 ACAAAGAGATTAACATTAGACACTCTC 57.354 33.333 0.00 0.00 33.30 3.20
364 365 8.802856 CAAAGAGATTAACATTAGACACTCTCG 58.197 37.037 0.00 0.00 34.51 4.04
365 366 6.500041 AGAGATTAACATTAGACACTCTCGC 58.500 40.000 0.00 0.00 34.51 5.03
366 367 5.593010 AGATTAACATTAGACACTCTCGCC 58.407 41.667 0.00 0.00 0.00 5.54
367 368 5.361285 AGATTAACATTAGACACTCTCGCCT 59.639 40.000 0.00 0.00 0.00 5.52
368 369 2.949451 ACATTAGACACTCTCGCCTG 57.051 50.000 0.00 0.00 0.00 4.85
369 370 2.447443 ACATTAGACACTCTCGCCTGA 58.553 47.619 0.00 0.00 0.00 3.86
370 371 2.826128 ACATTAGACACTCTCGCCTGAA 59.174 45.455 0.00 0.00 0.00 3.02
371 372 3.119316 ACATTAGACACTCTCGCCTGAAG 60.119 47.826 0.00 0.00 0.00 3.02
372 373 0.811915 TAGACACTCTCGCCTGAAGC 59.188 55.000 0.00 0.00 38.52 3.86
382 383 2.636299 GCCTGAAGCGGGTTAAACA 58.364 52.632 0.00 0.00 31.34 2.83
383 384 1.173913 GCCTGAAGCGGGTTAAACAT 58.826 50.000 0.00 0.00 31.34 2.71
384 385 1.544246 GCCTGAAGCGGGTTAAACATT 59.456 47.619 0.00 0.00 31.34 2.71
385 386 2.750712 GCCTGAAGCGGGTTAAACATTA 59.249 45.455 0.00 0.00 31.34 1.90
386 387 3.191791 GCCTGAAGCGGGTTAAACATTAA 59.808 43.478 0.00 0.00 31.34 1.40
387 388 4.674362 GCCTGAAGCGGGTTAAACATTAAG 60.674 45.833 0.00 0.00 31.34 1.85
388 389 4.457949 CCTGAAGCGGGTTAAACATTAAGT 59.542 41.667 0.00 0.00 0.00 2.24
389 390 5.365403 TGAAGCGGGTTAAACATTAAGTG 57.635 39.130 0.00 0.00 0.00 3.16
390 391 5.064558 TGAAGCGGGTTAAACATTAAGTGA 58.935 37.500 0.00 0.00 0.00 3.41
391 392 5.531659 TGAAGCGGGTTAAACATTAAGTGAA 59.468 36.000 0.00 0.00 0.00 3.18
392 393 5.366829 AGCGGGTTAAACATTAAGTGAAC 57.633 39.130 0.00 0.00 0.00 3.18
393 394 5.067954 AGCGGGTTAAACATTAAGTGAACT 58.932 37.500 0.00 0.00 31.08 3.01
394 395 6.232692 AGCGGGTTAAACATTAAGTGAACTA 58.767 36.000 0.00 0.00 31.08 2.24
395 396 6.711645 AGCGGGTTAAACATTAAGTGAACTAA 59.288 34.615 0.00 0.00 31.08 2.24
396 397 7.392393 AGCGGGTTAAACATTAAGTGAACTAAT 59.608 33.333 0.00 0.00 31.08 1.73
397 398 8.024865 GCGGGTTAAACATTAAGTGAACTAATT 58.975 33.333 0.00 0.00 31.08 1.40
398 399 9.902196 CGGGTTAAACATTAAGTGAACTAATTT 57.098 29.630 0.00 0.00 31.08 1.82
428 429 9.578439 AAGTATGACTGGTTAAATACGTACTTC 57.422 33.333 0.00 0.00 36.18 3.01
439 440 1.523758 ACGTACTTCGGTTCTACGGT 58.476 50.000 0.00 0.00 44.69 4.83
450 451 4.704540 TCGGTTCTACGGTTAGACCATTAA 59.295 41.667 0.00 0.00 38.47 1.40
451 452 5.184864 TCGGTTCTACGGTTAGACCATTAAA 59.815 40.000 0.00 0.00 38.47 1.52
452 453 5.517770 CGGTTCTACGGTTAGACCATTAAAG 59.482 44.000 0.00 0.00 38.47 1.85
453 454 6.401394 GGTTCTACGGTTAGACCATTAAAGT 58.599 40.000 0.00 0.00 38.47 2.66
454 455 7.547227 GGTTCTACGGTTAGACCATTAAAGTA 58.453 38.462 0.00 0.00 38.47 2.24
455 456 7.489435 GGTTCTACGGTTAGACCATTAAAGTAC 59.511 40.741 0.00 0.00 38.47 2.73
456 457 7.944729 TCTACGGTTAGACCATTAAAGTACT 57.055 36.000 0.00 0.00 38.47 2.73
550 560 4.681978 GCCGACGGCTCCAACAGT 62.682 66.667 31.30 0.00 46.69 3.55
551 561 2.432628 CCGACGGCTCCAACAGTC 60.433 66.667 0.00 0.00 0.00 3.51
552 562 2.432628 CGACGGCTCCAACAGTCC 60.433 66.667 0.00 0.00 0.00 3.85
553 563 2.741092 GACGGCTCCAACAGTCCA 59.259 61.111 0.00 0.00 0.00 4.02
554 564 1.070786 GACGGCTCCAACAGTCCAA 59.929 57.895 0.00 0.00 0.00 3.53
555 565 1.227853 ACGGCTCCAACAGTCCAAC 60.228 57.895 0.00 0.00 0.00 3.77
589 600 6.627243 GGTTAATAGCAAAACCGGAGAAAAT 58.373 36.000 9.46 0.00 36.12 1.82
592 603 6.827586 AATAGCAAAACCGGAGAAAATACA 57.172 33.333 9.46 0.00 0.00 2.29
729 854 2.201732 GTACCGTCCACGAGTCGTATA 58.798 52.381 19.43 6.44 43.02 1.47
730 855 1.959042 ACCGTCCACGAGTCGTATAT 58.041 50.000 19.43 0.00 43.02 0.86
731 856 3.111853 ACCGTCCACGAGTCGTATATA 57.888 47.619 19.43 0.96 43.02 0.86
733 858 4.820897 ACCGTCCACGAGTCGTATATATA 58.179 43.478 19.43 0.00 43.02 0.86
734 859 4.627467 ACCGTCCACGAGTCGTATATATAC 59.373 45.833 19.43 12.18 43.02 1.47
735 860 4.867047 CCGTCCACGAGTCGTATATATACT 59.133 45.833 19.43 4.06 43.02 2.12
736 861 5.005203 CCGTCCACGAGTCGTATATATACTC 59.995 48.000 19.43 11.44 43.02 2.59
767 898 1.443872 CCGTGTCCGACTGTGCTAC 60.444 63.158 0.00 0.00 35.63 3.58
831 984 2.112297 GCTGGTCCGTGGTTCCAA 59.888 61.111 0.00 0.00 0.00 3.53
832 985 2.258726 GCTGGTCCGTGGTTCCAAC 61.259 63.158 0.00 0.00 0.00 3.77
833 986 1.450211 CTGGTCCGTGGTTCCAACT 59.550 57.895 0.00 0.00 0.00 3.16
834 987 0.179029 CTGGTCCGTGGTTCCAACTT 60.179 55.000 0.00 0.00 0.00 2.66
835 988 0.179040 TGGTCCGTGGTTCCAACTTC 60.179 55.000 0.00 0.00 0.00 3.01
836 989 0.887836 GGTCCGTGGTTCCAACTTCC 60.888 60.000 0.00 0.00 0.00 3.46
837 990 0.179040 GTCCGTGGTTCCAACTTCCA 60.179 55.000 0.00 0.00 0.00 3.53
857 1010 3.118956 CCATATATTGACGAGGGAGAGGC 60.119 52.174 0.00 0.00 0.00 4.70
858 1011 2.088104 ATATTGACGAGGGAGAGGCA 57.912 50.000 0.00 0.00 0.00 4.75
859 1012 1.403814 TATTGACGAGGGAGAGGCAG 58.596 55.000 0.00 0.00 0.00 4.85
982 1737 1.027357 GGTAGTAGAACGATCCGCCA 58.973 55.000 0.00 0.00 0.00 5.69
999 1765 3.632080 ACCACGCCACCGGAATCA 61.632 61.111 9.46 0.00 39.22 2.57
1058 2008 2.024846 TCCTCCTCCTCGTTCTGAATCT 60.025 50.000 0.00 0.00 0.00 2.40
1230 2180 0.529378 CCTACGGCTCCAACTACGTT 59.471 55.000 0.00 0.00 40.38 3.99
1395 2390 6.567321 GCTGTAATCTATGGTGCATCACAATC 60.567 42.308 0.00 0.00 35.86 2.67
1398 2398 6.971726 AATCTATGGTGCATCACAATCAAT 57.028 33.333 0.00 0.00 35.86 2.57
1432 2444 8.547069 GTTGTTTTATTGATAACTTGCAGCAAA 58.453 29.630 9.65 0.00 0.00 3.68
1527 2539 0.960364 CTTTGCTACCGGTGGTGCAT 60.960 55.000 24.84 0.00 38.64 3.96
1578 2590 2.048603 GCCCTCGCCAAGCAGATTT 61.049 57.895 0.00 0.00 0.00 2.17
1596 4873 6.525976 GCAGATTTACACTTTCAAGAAGATGC 59.474 38.462 0.00 0.00 0.00 3.91
1654 4931 2.752640 TGTAGCGCTCGTGGCCTA 60.753 61.111 16.34 0.00 37.74 3.93
1695 4972 2.588877 CCGGCGTCATTGGGCTAG 60.589 66.667 6.01 0.00 0.00 3.42
1874 5162 5.345702 CAGCTAATGTGGATCAATTGTTGG 58.654 41.667 5.13 0.00 0.00 3.77
1990 5278 2.380064 TTGGAAACTTGGGTGCATCT 57.620 45.000 0.00 0.00 0.00 2.90
2320 5621 0.443869 CAGCAAAACGAGTCATCCGG 59.556 55.000 0.00 0.00 0.00 5.14
2375 5676 9.238368 TCAAGTAAATTTTTCTATTGGGACGAT 57.762 29.630 0.00 0.00 0.00 3.73
2607 5915 6.979465 TGCATATTCTTTTGTGAACACATGA 58.021 32.000 8.46 5.38 41.52 3.07
2652 5960 2.511600 CCCGACAGTCCGATTGGC 60.512 66.667 0.00 0.00 34.14 4.52
2663 5971 1.663702 CGATTGGCGGGACCGATAC 60.664 63.158 15.99 4.32 43.28 2.24
2746 6056 9.796120 TTTTTCCAAACATCTAAACAGTAGTTG 57.204 29.630 0.00 0.00 38.17 3.16
2747 6057 8.514330 TTTCCAAACATCTAAACAGTAGTTGT 57.486 30.769 0.00 0.00 43.45 3.32
2748 6058 9.616156 TTTCCAAACATCTAAACAGTAGTTGTA 57.384 29.630 0.00 0.00 39.73 2.41
2749 6059 8.827177 TCCAAACATCTAAACAGTAGTTGTAG 57.173 34.615 0.00 0.00 39.73 2.74
2750 6060 8.426489 TCCAAACATCTAAACAGTAGTTGTAGT 58.574 33.333 0.00 0.00 39.73 2.73
2751 6061 9.052759 CCAAACATCTAAACAGTAGTTGTAGTT 57.947 33.333 0.00 0.00 39.73 2.24
2753 6063 9.826574 AAACATCTAAACAGTAGTTGTAGTTCA 57.173 29.630 0.00 0.00 39.73 3.18
2755 6065 8.639761 ACATCTAAACAGTAGTTGTAGTTCACT 58.360 33.333 0.00 0.00 39.73 3.41
2758 6068 9.956720 TCTAAACAGTAGTTGTAGTTCACTAAC 57.043 33.333 0.00 0.00 39.73 2.34
2759 6069 9.189723 CTAAACAGTAGTTGTAGTTCACTAACC 57.810 37.037 0.00 0.00 39.73 2.85
2760 6070 6.973460 ACAGTAGTTGTAGTTCACTAACCT 57.027 37.500 0.00 0.00 38.56 3.50
3083 6561 8.645110 GGGTAGTAAAAGGATGCATACTTACTA 58.355 37.037 24.51 23.31 33.08 1.82
3106 6585 0.387878 CACACGCCAGAGACAGTCTC 60.388 60.000 21.47 21.47 43.70 3.36
3120 6599 2.425312 ACAGTCTCCGATTGAGCTAGTG 59.575 50.000 0.00 0.00 41.18 2.74
3127 6606 7.448777 AGTCTCCGATTGAGCTAGTGATATAAA 59.551 37.037 0.00 0.00 41.18 1.40
3170 6652 7.278646 GCTGATAAGTTGACAGTACATTGATCA 59.721 37.037 0.00 0.00 34.60 2.92
3201 6683 2.231964 GGCAATCAAGCTCATCCAAACA 59.768 45.455 0.00 0.00 34.17 2.83
3225 6707 1.371022 CAGAGACGGCGATCATCGG 60.371 63.158 16.62 2.51 40.84 4.18
3272 6778 6.657966 TCTGAATGATGAATGAATATGGAGCC 59.342 38.462 0.00 0.00 0.00 4.70
3273 6779 6.308566 TGAATGATGAATGAATATGGAGCCA 58.691 36.000 0.00 0.00 0.00 4.75
3274 6780 6.951778 TGAATGATGAATGAATATGGAGCCAT 59.048 34.615 7.25 7.25 40.19 4.40
3275 6781 6.775594 ATGATGAATGAATATGGAGCCATG 57.224 37.500 12.18 0.00 37.82 3.66
3276 6782 5.014202 TGATGAATGAATATGGAGCCATGG 58.986 41.667 7.63 7.63 37.82 3.66
3277 6783 4.727792 TGAATGAATATGGAGCCATGGA 57.272 40.909 18.40 0.00 37.82 3.41
3278 6784 5.064314 TGAATGAATATGGAGCCATGGAA 57.936 39.130 18.40 0.00 37.82 3.53
3279 6785 5.074804 TGAATGAATATGGAGCCATGGAAG 58.925 41.667 18.40 0.00 37.82 3.46
3283 6789 3.733883 ATATGGAGCCATGGAAGGATG 57.266 47.619 18.40 0.00 37.82 3.51
3284 6790 1.526315 ATGGAGCCATGGAAGGATGA 58.474 50.000 18.40 0.00 35.03 2.92
3285 6791 1.526315 TGGAGCCATGGAAGGATGAT 58.474 50.000 18.40 0.00 0.00 2.45
3286 6792 2.705148 TGGAGCCATGGAAGGATGATA 58.295 47.619 18.40 0.00 0.00 2.15
3287 6793 3.262842 TGGAGCCATGGAAGGATGATAT 58.737 45.455 18.40 0.00 0.00 1.63
3288 6794 4.437967 TGGAGCCATGGAAGGATGATATA 58.562 43.478 18.40 0.00 0.00 0.86
3289 6795 4.225942 TGGAGCCATGGAAGGATGATATAC 59.774 45.833 18.40 0.00 0.00 1.47
3290 6796 4.437239 GAGCCATGGAAGGATGATATACG 58.563 47.826 18.40 0.00 0.00 3.06
3291 6797 2.939103 GCCATGGAAGGATGATATACGC 59.061 50.000 18.40 0.00 0.00 4.42
3292 6798 3.535561 CCATGGAAGGATGATATACGCC 58.464 50.000 5.56 0.00 0.00 5.68
3293 6799 3.535561 CATGGAAGGATGATATACGCCC 58.464 50.000 0.00 0.00 0.00 6.13
3294 6800 1.906574 TGGAAGGATGATATACGCCCC 59.093 52.381 0.00 0.00 0.00 5.80
3305 6818 2.531483 ATACGCCCCACTCCAGGTCT 62.531 60.000 0.00 0.00 0.00 3.85
3375 6888 3.873361 TCGATGATGTTCTTCATTGCTCC 59.127 43.478 9.62 0.00 37.41 4.70
3379 6892 5.682234 TGATGTTCTTCATTGCTCCTCTA 57.318 39.130 0.00 0.00 36.83 2.43
3380 6893 5.423015 TGATGTTCTTCATTGCTCCTCTAC 58.577 41.667 0.00 0.00 36.83 2.59
3382 6895 5.227569 TGTTCTTCATTGCTCCTCTACAA 57.772 39.130 0.00 0.00 0.00 2.41
3383 6896 5.240891 TGTTCTTCATTGCTCCTCTACAAG 58.759 41.667 0.00 0.00 0.00 3.16
3384 6897 5.221722 TGTTCTTCATTGCTCCTCTACAAGT 60.222 40.000 0.00 0.00 0.00 3.16
3385 6898 5.078411 TCTTCATTGCTCCTCTACAAGTC 57.922 43.478 0.00 0.00 0.00 3.01
3386 6899 3.510388 TCATTGCTCCTCTACAAGTCG 57.490 47.619 0.00 0.00 0.00 4.18
3387 6900 1.929836 CATTGCTCCTCTACAAGTCGC 59.070 52.381 0.00 0.00 0.00 5.19
3388 6901 0.966179 TTGCTCCTCTACAAGTCGCA 59.034 50.000 0.00 0.00 0.00 5.10
3389 6902 1.186200 TGCTCCTCTACAAGTCGCAT 58.814 50.000 0.00 0.00 0.00 4.73
3390 6903 1.135139 TGCTCCTCTACAAGTCGCATC 59.865 52.381 0.00 0.00 0.00 3.91
3420 6933 2.693797 CCTCTCATGCACACAACAAC 57.306 50.000 0.00 0.00 0.00 3.32
3421 6934 2.224606 CCTCTCATGCACACAACAACT 58.775 47.619 0.00 0.00 0.00 3.16
3422 6935 2.031420 CCTCTCATGCACACAACAACTG 60.031 50.000 0.00 0.00 0.00 3.16
3423 6936 1.334556 TCTCATGCACACAACAACTGC 59.665 47.619 0.00 0.00 0.00 4.40
3424 6937 0.385029 TCATGCACACAACAACTGCC 59.615 50.000 0.00 0.00 0.00 4.85
3425 6938 0.598158 CATGCACACAACAACTGCCC 60.598 55.000 0.00 0.00 0.00 5.36
3426 6939 1.042003 ATGCACACAACAACTGCCCA 61.042 50.000 0.00 0.00 0.00 5.36
3427 6940 1.042003 TGCACACAACAACTGCCCAT 61.042 50.000 0.00 0.00 0.00 4.00
3428 6941 0.598158 GCACACAACAACTGCCCATG 60.598 55.000 0.00 0.00 0.00 3.66
3429 6942 0.598158 CACACAACAACTGCCCATGC 60.598 55.000 0.00 0.00 38.26 4.06
3430 6943 0.756442 ACACAACAACTGCCCATGCT 60.756 50.000 0.00 0.00 38.71 3.79
3431 6944 0.319211 CACAACAACTGCCCATGCTG 60.319 55.000 0.00 0.00 41.75 4.41
3432 6945 0.467844 ACAACAACTGCCCATGCTGA 60.468 50.000 0.00 0.00 39.51 4.26
3433 6946 0.892755 CAACAACTGCCCATGCTGAT 59.107 50.000 0.00 0.00 39.51 2.90
3434 6947 1.274167 CAACAACTGCCCATGCTGATT 59.726 47.619 0.00 0.00 39.51 2.57
3435 6948 2.492881 CAACAACTGCCCATGCTGATTA 59.507 45.455 0.00 0.00 39.51 1.75
3436 6949 2.372264 ACAACTGCCCATGCTGATTAG 58.628 47.619 0.00 0.00 39.51 1.73
3437 6950 1.679680 CAACTGCCCATGCTGATTAGG 59.320 52.381 0.00 0.00 39.51 2.69
3438 6951 1.216064 ACTGCCCATGCTGATTAGGA 58.784 50.000 0.00 0.00 39.51 2.94
3439 6952 1.142465 ACTGCCCATGCTGATTAGGAG 59.858 52.381 0.00 0.00 39.51 3.69
3440 6953 1.419012 CTGCCCATGCTGATTAGGAGA 59.581 52.381 0.00 0.00 38.61 3.71
3441 6954 1.419012 TGCCCATGCTGATTAGGAGAG 59.581 52.381 0.00 0.00 38.71 3.20
3442 6955 1.271271 GCCCATGCTGATTAGGAGAGG 60.271 57.143 0.00 0.00 33.53 3.69
3443 6956 1.350351 CCCATGCTGATTAGGAGAGGG 59.650 57.143 5.22 5.22 37.26 4.30
3444 6957 1.350351 CCATGCTGATTAGGAGAGGGG 59.650 57.143 0.00 0.00 0.00 4.79
3445 6958 1.063183 ATGCTGATTAGGAGAGGGGC 58.937 55.000 0.00 0.00 0.00 5.80
3446 6959 0.326522 TGCTGATTAGGAGAGGGGCA 60.327 55.000 0.00 0.00 0.00 5.36
3447 6960 0.839946 GCTGATTAGGAGAGGGGCAA 59.160 55.000 0.00 0.00 0.00 4.52
3448 6961 1.212935 GCTGATTAGGAGAGGGGCAAA 59.787 52.381 0.00 0.00 0.00 3.68
3449 6962 2.924421 CTGATTAGGAGAGGGGCAAAC 58.076 52.381 0.00 0.00 0.00 2.93
3450 6963 2.239654 CTGATTAGGAGAGGGGCAAACA 59.760 50.000 0.00 0.00 0.00 2.83
3451 6964 2.647299 TGATTAGGAGAGGGGCAAACAA 59.353 45.455 0.00 0.00 0.00 2.83
3452 6965 3.075283 TGATTAGGAGAGGGGCAAACAAA 59.925 43.478 0.00 0.00 0.00 2.83
3453 6966 2.879103 TAGGAGAGGGGCAAACAAAG 57.121 50.000 0.00 0.00 0.00 2.77
3454 6967 0.853530 AGGAGAGGGGCAAACAAAGT 59.146 50.000 0.00 0.00 0.00 2.66
3455 6968 0.961753 GGAGAGGGGCAAACAAAGTG 59.038 55.000 0.00 0.00 0.00 3.16
3456 6969 0.961753 GAGAGGGGCAAACAAAGTGG 59.038 55.000 0.00 0.00 0.00 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 9.130312 CCCGTCATGAAATAAAATTTTACGAAA 57.870 29.630 12.74 0.98 0.00 3.46
5 6 7.273815 GCCCGTCATGAAATAAAATTTTACGAA 59.726 33.333 12.74 0.65 0.00 3.85
6 7 6.748198 GCCCGTCATGAAATAAAATTTTACGA 59.252 34.615 12.74 0.00 0.00 3.43
7 8 6.020201 GGCCCGTCATGAAATAAAATTTTACG 60.020 38.462 12.74 11.29 0.00 3.18
8 9 6.814146 TGGCCCGTCATGAAATAAAATTTTAC 59.186 34.615 12.74 1.89 0.00 2.01
9 10 6.936279 TGGCCCGTCATGAAATAAAATTTTA 58.064 32.000 12.85 12.85 0.00 1.52
10 11 5.799213 TGGCCCGTCATGAAATAAAATTTT 58.201 33.333 8.75 8.75 0.00 1.82
11 12 5.413309 TGGCCCGTCATGAAATAAAATTT 57.587 34.783 0.00 0.00 0.00 1.82
12 13 5.186797 TCTTGGCCCGTCATGAAATAAAATT 59.813 36.000 0.00 0.00 0.00 1.82
13 14 4.709397 TCTTGGCCCGTCATGAAATAAAAT 59.291 37.500 0.00 0.00 0.00 1.82
14 15 4.082845 TCTTGGCCCGTCATGAAATAAAA 58.917 39.130 0.00 0.00 0.00 1.52
15 16 3.691575 TCTTGGCCCGTCATGAAATAAA 58.308 40.909 0.00 0.00 0.00 1.40
16 17 3.358111 TCTTGGCCCGTCATGAAATAA 57.642 42.857 0.00 0.00 0.00 1.40
17 18 3.358111 TTCTTGGCCCGTCATGAAATA 57.642 42.857 0.00 0.00 30.99 1.40
18 19 2.214376 TTCTTGGCCCGTCATGAAAT 57.786 45.000 0.00 0.00 30.99 2.17
19 20 2.214376 ATTCTTGGCCCGTCATGAAA 57.786 45.000 0.00 0.00 35.45 2.69
20 21 3.576078 ATATTCTTGGCCCGTCATGAA 57.424 42.857 0.00 0.77 35.99 2.57
21 22 3.118075 TCAATATTCTTGGCCCGTCATGA 60.118 43.478 0.00 0.00 0.00 3.07
22 23 3.213506 TCAATATTCTTGGCCCGTCATG 58.786 45.455 0.00 0.00 0.00 3.07
23 24 3.576078 TCAATATTCTTGGCCCGTCAT 57.424 42.857 0.00 0.00 0.00 3.06
24 25 3.576078 ATCAATATTCTTGGCCCGTCA 57.424 42.857 0.00 0.00 0.00 4.35
25 26 4.489679 GAATCAATATTCTTGGCCCGTC 57.510 45.455 0.00 0.00 38.79 4.79
51 52 9.784531 GCGTACCTATATCTATACCCACTAATA 57.215 37.037 0.00 0.00 0.00 0.98
52 53 8.277197 TGCGTACCTATATCTATACCCACTAAT 58.723 37.037 0.00 0.00 0.00 1.73
53 54 7.632861 TGCGTACCTATATCTATACCCACTAA 58.367 38.462 0.00 0.00 0.00 2.24
54 55 7.199167 TGCGTACCTATATCTATACCCACTA 57.801 40.000 0.00 0.00 0.00 2.74
55 56 6.070951 TGCGTACCTATATCTATACCCACT 57.929 41.667 0.00 0.00 0.00 4.00
56 57 6.735145 GCATGCGTACCTATATCTATACCCAC 60.735 46.154 0.00 0.00 0.00 4.61
57 58 5.301045 GCATGCGTACCTATATCTATACCCA 59.699 44.000 0.00 0.00 0.00 4.51
58 59 5.535406 AGCATGCGTACCTATATCTATACCC 59.465 44.000 13.01 0.00 0.00 3.69
59 60 6.636562 AGCATGCGTACCTATATCTATACC 57.363 41.667 13.01 0.00 0.00 2.73
60 61 7.432545 CACAAGCATGCGTACCTATATCTATAC 59.567 40.741 13.01 0.00 0.00 1.47
61 62 7.480810 CACAAGCATGCGTACCTATATCTATA 58.519 38.462 13.01 0.00 0.00 1.31
62 63 6.333416 CACAAGCATGCGTACCTATATCTAT 58.667 40.000 13.01 0.00 0.00 1.98
63 64 5.709966 CACAAGCATGCGTACCTATATCTA 58.290 41.667 13.01 0.00 0.00 1.98
64 65 4.560128 CACAAGCATGCGTACCTATATCT 58.440 43.478 13.01 0.00 0.00 1.98
65 66 3.123621 GCACAAGCATGCGTACCTATATC 59.876 47.826 13.01 0.00 41.58 1.63
66 67 3.067106 GCACAAGCATGCGTACCTATAT 58.933 45.455 13.01 0.00 41.58 0.86
67 68 2.479837 GCACAAGCATGCGTACCTATA 58.520 47.619 13.01 0.00 41.58 1.31
68 69 1.299541 GCACAAGCATGCGTACCTAT 58.700 50.000 13.01 0.00 41.58 2.57
69 70 2.762360 GCACAAGCATGCGTACCTA 58.238 52.632 13.01 0.00 41.58 3.08
70 71 3.578456 GCACAAGCATGCGTACCT 58.422 55.556 13.01 0.00 41.58 3.08
76 77 8.103094 TTCTTGTTAGAATATGCACAAGCATGC 61.103 37.037 10.51 10.51 46.54 4.06
77 78 7.252708 TTCTTGTTAGAATATGCACAAGCATG 58.747 34.615 12.80 0.00 46.54 4.06
79 80 6.816134 TTCTTGTTAGAATATGCACAAGCA 57.184 33.333 8.46 0.00 44.40 3.91
80 81 8.693542 ATTTTCTTGTTAGAATATGCACAAGC 57.306 30.769 8.46 0.00 43.88 4.01
84 85 9.508567 GGAAGATTTTCTTGTTAGAATATGCAC 57.491 33.333 0.00 0.00 40.01 4.57
85 86 9.466497 AGGAAGATTTTCTTGTTAGAATATGCA 57.534 29.630 0.00 0.00 40.01 3.96
86 87 9.943163 GAGGAAGATTTTCTTGTTAGAATATGC 57.057 33.333 0.00 0.00 40.01 3.14
89 90 9.892130 GAGGAGGAAGATTTTCTTGTTAGAATA 57.108 33.333 0.00 0.00 40.01 1.75
90 91 8.386264 TGAGGAGGAAGATTTTCTTGTTAGAAT 58.614 33.333 0.00 0.00 40.01 2.40
91 92 7.745717 TGAGGAGGAAGATTTTCTTGTTAGAA 58.254 34.615 0.00 0.00 36.73 2.10
92 93 7.316393 TGAGGAGGAAGATTTTCTTGTTAGA 57.684 36.000 0.00 0.00 36.73 2.10
93 94 7.826252 TGATGAGGAGGAAGATTTTCTTGTTAG 59.174 37.037 0.00 0.00 36.73 2.34
94 95 7.607991 GTGATGAGGAGGAAGATTTTCTTGTTA 59.392 37.037 0.00 0.00 36.73 2.41
95 96 6.432472 GTGATGAGGAGGAAGATTTTCTTGTT 59.568 38.462 0.00 0.00 36.73 2.83
96 97 5.942826 GTGATGAGGAGGAAGATTTTCTTGT 59.057 40.000 0.00 0.00 36.73 3.16
97 98 6.093771 CAGTGATGAGGAGGAAGATTTTCTTG 59.906 42.308 0.00 0.00 36.73 3.02
98 99 6.179040 CAGTGATGAGGAGGAAGATTTTCTT 58.821 40.000 0.00 0.00 39.87 2.52
99 100 5.743117 CAGTGATGAGGAGGAAGATTTTCT 58.257 41.667 0.00 0.00 33.68 2.52
100 101 4.335037 GCAGTGATGAGGAGGAAGATTTTC 59.665 45.833 0.00 0.00 0.00 2.29
101 102 4.268359 GCAGTGATGAGGAGGAAGATTTT 58.732 43.478 0.00 0.00 0.00 1.82
102 103 3.371380 GGCAGTGATGAGGAGGAAGATTT 60.371 47.826 0.00 0.00 0.00 2.17
103 104 2.172293 GGCAGTGATGAGGAGGAAGATT 59.828 50.000 0.00 0.00 0.00 2.40
104 105 1.767681 GGCAGTGATGAGGAGGAAGAT 59.232 52.381 0.00 0.00 0.00 2.40
105 106 1.198713 GGCAGTGATGAGGAGGAAGA 58.801 55.000 0.00 0.00 0.00 2.87
106 107 0.179089 CGGCAGTGATGAGGAGGAAG 60.179 60.000 0.00 0.00 0.00 3.46
107 108 1.617018 CCGGCAGTGATGAGGAGGAA 61.617 60.000 0.00 0.00 0.00 3.36
108 109 2.060383 CCGGCAGTGATGAGGAGGA 61.060 63.158 0.00 0.00 0.00 3.71
109 110 1.406065 ATCCGGCAGTGATGAGGAGG 61.406 60.000 0.00 0.00 34.14 4.30
110 111 0.033228 GATCCGGCAGTGATGAGGAG 59.967 60.000 0.00 0.00 34.14 3.69
111 112 1.402896 GGATCCGGCAGTGATGAGGA 61.403 60.000 0.00 0.00 35.24 3.71
112 113 1.070445 GGATCCGGCAGTGATGAGG 59.930 63.158 0.00 0.00 0.00 3.86
113 114 0.395686 ATGGATCCGGCAGTGATGAG 59.604 55.000 7.39 0.00 0.00 2.90
114 115 0.839277 AATGGATCCGGCAGTGATGA 59.161 50.000 7.39 0.00 0.00 2.92
115 116 2.549064 TAATGGATCCGGCAGTGATG 57.451 50.000 7.39 0.00 0.00 3.07
116 117 3.576078 TTTAATGGATCCGGCAGTGAT 57.424 42.857 7.39 0.00 0.00 3.06
117 118 3.013921 GTTTTAATGGATCCGGCAGTGA 58.986 45.455 7.39 0.00 0.00 3.41
118 119 3.016736 AGTTTTAATGGATCCGGCAGTG 58.983 45.455 7.39 0.00 0.00 3.66
119 120 3.366052 AGTTTTAATGGATCCGGCAGT 57.634 42.857 7.39 0.00 0.00 4.40
120 121 3.242739 CGAAGTTTTAATGGATCCGGCAG 60.243 47.826 7.39 0.00 0.00 4.85
121 122 2.680841 CGAAGTTTTAATGGATCCGGCA 59.319 45.455 7.39 0.00 0.00 5.69
122 123 2.940410 TCGAAGTTTTAATGGATCCGGC 59.060 45.455 7.39 0.00 0.00 6.13
123 124 5.065988 ACATTCGAAGTTTTAATGGATCCGG 59.934 40.000 7.39 0.00 35.40 5.14
124 125 5.965334 CACATTCGAAGTTTTAATGGATCCG 59.035 40.000 7.39 0.00 35.40 4.18
125 126 6.265577 CCACATTCGAAGTTTTAATGGATCC 58.734 40.000 4.20 4.20 35.40 3.36
126 127 6.265577 CCCACATTCGAAGTTTTAATGGATC 58.734 40.000 3.35 0.00 35.40 3.36
127 128 5.127031 CCCCACATTCGAAGTTTTAATGGAT 59.873 40.000 3.35 0.00 35.40 3.41
128 129 4.461081 CCCCACATTCGAAGTTTTAATGGA 59.539 41.667 3.35 0.00 35.40 3.41
129 130 4.219725 ACCCCACATTCGAAGTTTTAATGG 59.780 41.667 3.35 3.41 35.40 3.16
130 131 5.385509 ACCCCACATTCGAAGTTTTAATG 57.614 39.130 3.35 8.71 36.80 1.90
131 132 6.152154 CCTAACCCCACATTCGAAGTTTTAAT 59.848 38.462 3.35 0.00 0.00 1.40
132 133 5.474189 CCTAACCCCACATTCGAAGTTTTAA 59.526 40.000 3.35 0.00 0.00 1.52
133 134 5.005094 CCTAACCCCACATTCGAAGTTTTA 58.995 41.667 3.35 0.00 0.00 1.52
134 135 3.824443 CCTAACCCCACATTCGAAGTTTT 59.176 43.478 3.35 0.00 0.00 2.43
135 136 3.181437 ACCTAACCCCACATTCGAAGTTT 60.181 43.478 3.35 0.00 0.00 2.66
136 137 2.374170 ACCTAACCCCACATTCGAAGTT 59.626 45.455 3.35 3.76 0.00 2.66
137 138 1.982958 ACCTAACCCCACATTCGAAGT 59.017 47.619 3.35 0.00 0.00 3.01
138 139 2.781681 ACCTAACCCCACATTCGAAG 57.218 50.000 3.35 0.00 0.00 3.79
139 140 4.519213 CATAACCTAACCCCACATTCGAA 58.481 43.478 0.00 0.00 0.00 3.71
140 141 3.683281 GCATAACCTAACCCCACATTCGA 60.683 47.826 0.00 0.00 0.00 3.71
141 142 2.616842 GCATAACCTAACCCCACATTCG 59.383 50.000 0.00 0.00 0.00 3.34
142 143 2.616842 CGCATAACCTAACCCCACATTC 59.383 50.000 0.00 0.00 0.00 2.67
143 144 2.240160 TCGCATAACCTAACCCCACATT 59.760 45.455 0.00 0.00 0.00 2.71
144 145 1.841277 TCGCATAACCTAACCCCACAT 59.159 47.619 0.00 0.00 0.00 3.21
145 146 1.208535 CTCGCATAACCTAACCCCACA 59.791 52.381 0.00 0.00 0.00 4.17
146 147 1.483415 TCTCGCATAACCTAACCCCAC 59.517 52.381 0.00 0.00 0.00 4.61
147 148 1.868713 TCTCGCATAACCTAACCCCA 58.131 50.000 0.00 0.00 0.00 4.96
148 149 2.433239 TCTTCTCGCATAACCTAACCCC 59.567 50.000 0.00 0.00 0.00 4.95
149 150 3.455327 GTCTTCTCGCATAACCTAACCC 58.545 50.000 0.00 0.00 0.00 4.11
150 151 3.114065 CGTCTTCTCGCATAACCTAACC 58.886 50.000 0.00 0.00 0.00 2.85
151 152 3.767278 ACGTCTTCTCGCATAACCTAAC 58.233 45.455 0.00 0.00 0.00 2.34
152 153 4.171005 CAACGTCTTCTCGCATAACCTAA 58.829 43.478 0.00 0.00 0.00 2.69
153 154 3.428452 CCAACGTCTTCTCGCATAACCTA 60.428 47.826 0.00 0.00 0.00 3.08
154 155 2.607187 CAACGTCTTCTCGCATAACCT 58.393 47.619 0.00 0.00 0.00 3.50
155 156 1.659098 CCAACGTCTTCTCGCATAACC 59.341 52.381 0.00 0.00 0.00 2.85
156 157 2.092211 CACCAACGTCTTCTCGCATAAC 59.908 50.000 0.00 0.00 0.00 1.89
157 158 2.029739 TCACCAACGTCTTCTCGCATAA 60.030 45.455 0.00 0.00 0.00 1.90
158 159 1.542472 TCACCAACGTCTTCTCGCATA 59.458 47.619 0.00 0.00 0.00 3.14
159 160 0.317160 TCACCAACGTCTTCTCGCAT 59.683 50.000 0.00 0.00 0.00 4.73
160 161 0.596600 GTCACCAACGTCTTCTCGCA 60.597 55.000 0.00 0.00 0.00 5.10
161 162 1.282930 GGTCACCAACGTCTTCTCGC 61.283 60.000 0.00 0.00 0.00 5.03
162 163 0.031585 TGGTCACCAACGTCTTCTCG 59.968 55.000 0.00 0.00 0.00 4.04
163 164 1.499049 GTGGTCACCAACGTCTTCTC 58.501 55.000 0.00 0.00 34.18 2.87
164 165 3.680842 GTGGTCACCAACGTCTTCT 57.319 52.632 0.00 0.00 34.18 2.85
175 176 4.211125 TCAGATCTCTAGATGGTGGTCAC 58.789 47.826 0.00 0.00 34.37 3.67
176 177 4.526438 TCAGATCTCTAGATGGTGGTCA 57.474 45.455 0.00 0.00 34.37 4.02
177 178 5.304101 ACAATCAGATCTCTAGATGGTGGTC 59.696 44.000 0.00 0.00 34.37 4.02
178 179 5.215069 ACAATCAGATCTCTAGATGGTGGT 58.785 41.667 0.00 0.00 34.37 4.16
179 180 5.804944 ACAATCAGATCTCTAGATGGTGG 57.195 43.478 0.00 0.00 34.37 4.61
180 181 6.580788 ACAACAATCAGATCTCTAGATGGTG 58.419 40.000 3.03 0.00 34.37 4.17
181 182 6.183360 GGACAACAATCAGATCTCTAGATGGT 60.183 42.308 0.00 0.00 34.37 3.55
182 183 6.183360 TGGACAACAATCAGATCTCTAGATGG 60.183 42.308 0.00 0.00 34.37 3.51
183 184 6.814043 TGGACAACAATCAGATCTCTAGATG 58.186 40.000 0.00 0.00 34.37 2.90
184 185 6.838090 TCTGGACAACAATCAGATCTCTAGAT 59.162 38.462 0.00 0.00 37.51 1.98
185 186 6.190587 TCTGGACAACAATCAGATCTCTAGA 58.809 40.000 0.00 0.00 33.21 2.43
186 187 6.320926 TCTCTGGACAACAATCAGATCTCTAG 59.679 42.308 0.00 0.00 36.99 2.43
187 188 6.190587 TCTCTGGACAACAATCAGATCTCTA 58.809 40.000 0.00 0.00 36.99 2.43
188 189 5.022122 TCTCTGGACAACAATCAGATCTCT 58.978 41.667 0.00 0.00 36.99 3.10
189 190 5.336150 TCTCTGGACAACAATCAGATCTC 57.664 43.478 0.00 0.00 36.99 2.75
190 191 5.752036 TTCTCTGGACAACAATCAGATCT 57.248 39.130 0.00 0.00 36.99 2.75
191 192 6.128063 CCTTTTCTCTGGACAACAATCAGATC 60.128 42.308 0.00 0.00 36.99 2.75
192 193 5.709164 CCTTTTCTCTGGACAACAATCAGAT 59.291 40.000 0.00 0.00 36.99 2.90
193 194 5.065914 CCTTTTCTCTGGACAACAATCAGA 58.934 41.667 0.00 0.00 36.30 3.27
194 195 5.065914 TCCTTTTCTCTGGACAACAATCAG 58.934 41.667 0.00 0.00 0.00 2.90
195 196 5.047566 TCCTTTTCTCTGGACAACAATCA 57.952 39.130 0.00 0.00 0.00 2.57
203 204 1.893801 TCCTCGTCCTTTTCTCTGGAC 59.106 52.381 0.00 0.00 46.69 4.02
204 205 2.171840 CTCCTCGTCCTTTTCTCTGGA 58.828 52.381 0.00 0.00 0.00 3.86
205 206 2.171840 TCTCCTCGTCCTTTTCTCTGG 58.828 52.381 0.00 0.00 0.00 3.86
206 207 3.508012 TCTTCTCCTCGTCCTTTTCTCTG 59.492 47.826 0.00 0.00 0.00 3.35
207 208 3.768878 TCTTCTCCTCGTCCTTTTCTCT 58.231 45.455 0.00 0.00 0.00 3.10
208 209 4.522722 TTCTTCTCCTCGTCCTTTTCTC 57.477 45.455 0.00 0.00 0.00 2.87
209 210 5.491323 AATTCTTCTCCTCGTCCTTTTCT 57.509 39.130 0.00 0.00 0.00 2.52
210 211 5.701290 TCAAATTCTTCTCCTCGTCCTTTTC 59.299 40.000 0.00 0.00 0.00 2.29
211 212 5.621193 TCAAATTCTTCTCCTCGTCCTTTT 58.379 37.500 0.00 0.00 0.00 2.27
212 213 5.228945 TCAAATTCTTCTCCTCGTCCTTT 57.771 39.130 0.00 0.00 0.00 3.11
213 214 4.891992 TCAAATTCTTCTCCTCGTCCTT 57.108 40.909 0.00 0.00 0.00 3.36
214 215 6.739331 ATATCAAATTCTTCTCCTCGTCCT 57.261 37.500 0.00 0.00 0.00 3.85
215 216 9.145865 GATAATATCAAATTCTTCTCCTCGTCC 57.854 37.037 0.00 0.00 0.00 4.79
216 217 9.698309 TGATAATATCAAATTCTTCTCCTCGTC 57.302 33.333 0.00 0.00 36.11 4.20
231 232 4.876679 TGGCGGTCGTTTTGATAATATCAA 59.123 37.500 11.32 11.32 46.77 2.57
232 233 4.271533 GTGGCGGTCGTTTTGATAATATCA 59.728 41.667 0.00 0.00 37.55 2.15
233 234 4.319261 GGTGGCGGTCGTTTTGATAATATC 60.319 45.833 0.00 0.00 0.00 1.63
234 235 3.562557 GGTGGCGGTCGTTTTGATAATAT 59.437 43.478 0.00 0.00 0.00 1.28
235 236 2.937799 GGTGGCGGTCGTTTTGATAATA 59.062 45.455 0.00 0.00 0.00 0.98
236 237 1.741145 GGTGGCGGTCGTTTTGATAAT 59.259 47.619 0.00 0.00 0.00 1.28
237 238 1.158434 GGTGGCGGTCGTTTTGATAA 58.842 50.000 0.00 0.00 0.00 1.75
238 239 0.674269 GGGTGGCGGTCGTTTTGATA 60.674 55.000 0.00 0.00 0.00 2.15
239 240 1.969589 GGGTGGCGGTCGTTTTGAT 60.970 57.895 0.00 0.00 0.00 2.57
240 241 2.592287 GGGTGGCGGTCGTTTTGA 60.592 61.111 0.00 0.00 0.00 2.69
241 242 3.666253 GGGGTGGCGGTCGTTTTG 61.666 66.667 0.00 0.00 0.00 2.44
242 243 4.192453 TGGGGTGGCGGTCGTTTT 62.192 61.111 0.00 0.00 0.00 2.43
243 244 4.636435 CTGGGGTGGCGGTCGTTT 62.636 66.667 0.00 0.00 0.00 3.60
246 247 3.026431 ATTACTGGGGTGGCGGTCG 62.026 63.158 0.00 0.00 0.00 4.79
247 248 1.451387 CATTACTGGGGTGGCGGTC 60.451 63.158 0.00 0.00 0.00 4.79
248 249 2.674754 CATTACTGGGGTGGCGGT 59.325 61.111 0.00 0.00 0.00 5.68
249 250 2.828549 GCATTACTGGGGTGGCGG 60.829 66.667 0.00 0.00 0.00 6.13
250 251 2.045438 TGCATTACTGGGGTGGCG 60.045 61.111 0.00 0.00 0.00 5.69
251 252 0.749454 CTCTGCATTACTGGGGTGGC 60.749 60.000 0.00 0.00 0.00 5.01
252 253 0.620556 ACTCTGCATTACTGGGGTGG 59.379 55.000 0.00 0.00 0.00 4.61
253 254 1.003580 ACACTCTGCATTACTGGGGTG 59.996 52.381 0.15 0.15 0.00 4.61
254 255 1.279271 GACACTCTGCATTACTGGGGT 59.721 52.381 0.00 0.00 0.00 4.95
255 256 1.556911 AGACACTCTGCATTACTGGGG 59.443 52.381 0.00 0.00 0.00 4.96
256 257 4.471904 TTAGACACTCTGCATTACTGGG 57.528 45.455 0.00 0.00 0.00 4.45
257 258 4.813161 CCATTAGACACTCTGCATTACTGG 59.187 45.833 0.00 0.00 0.00 4.00
258 259 4.813161 CCCATTAGACACTCTGCATTACTG 59.187 45.833 0.00 0.00 0.00 2.74
259 260 4.716784 TCCCATTAGACACTCTGCATTACT 59.283 41.667 0.00 0.00 0.00 2.24
260 261 5.023533 TCCCATTAGACACTCTGCATTAC 57.976 43.478 0.00 0.00 0.00 1.89
261 262 5.366477 TCATCCCATTAGACACTCTGCATTA 59.634 40.000 0.00 0.00 0.00 1.90
262 263 4.164796 TCATCCCATTAGACACTCTGCATT 59.835 41.667 0.00 0.00 0.00 3.56
263 264 3.713248 TCATCCCATTAGACACTCTGCAT 59.287 43.478 0.00 0.00 0.00 3.96
264 265 3.106827 TCATCCCATTAGACACTCTGCA 58.893 45.455 0.00 0.00 0.00 4.41
265 266 3.462021 GTCATCCCATTAGACACTCTGC 58.538 50.000 0.00 0.00 32.68 4.26
266 267 3.708631 AGGTCATCCCATTAGACACTCTG 59.291 47.826 0.00 0.00 34.04 3.35
267 268 4.000928 AGGTCATCCCATTAGACACTCT 57.999 45.455 0.00 0.00 34.04 3.24
268 269 6.426646 AATAGGTCATCCCATTAGACACTC 57.573 41.667 0.00 0.00 34.04 3.51
269 270 7.233757 GTCTAATAGGTCATCCCATTAGACACT 59.766 40.741 25.41 2.22 46.93 3.55
270 271 7.379750 GTCTAATAGGTCATCCCATTAGACAC 58.620 42.308 25.41 11.44 46.93 3.67
271 272 7.540474 GTCTAATAGGTCATCCCATTAGACA 57.460 40.000 25.41 5.71 46.93 3.41
273 274 6.497259 GGTGTCTAATAGGTCATCCCATTAGA 59.503 42.308 9.74 9.74 38.99 2.10
274 275 6.295916 GGGTGTCTAATAGGTCATCCCATTAG 60.296 46.154 6.25 6.25 36.57 1.73
275 276 5.546499 GGGTGTCTAATAGGTCATCCCATTA 59.454 44.000 5.01 0.00 34.66 1.90
276 277 4.351111 GGGTGTCTAATAGGTCATCCCATT 59.649 45.833 5.01 0.00 34.66 3.16
277 278 3.910627 GGGTGTCTAATAGGTCATCCCAT 59.089 47.826 5.01 0.00 34.66 4.00
278 279 3.051341 AGGGTGTCTAATAGGTCATCCCA 60.051 47.826 10.35 0.00 35.31 4.37
279 280 3.325135 CAGGGTGTCTAATAGGTCATCCC 59.675 52.174 10.35 11.03 32.08 3.85
280 281 4.039366 GTCAGGGTGTCTAATAGGTCATCC 59.961 50.000 7.30 7.30 0.00 3.51
281 282 4.649674 TGTCAGGGTGTCTAATAGGTCATC 59.350 45.833 0.00 0.00 0.00 2.92
282 283 4.620723 TGTCAGGGTGTCTAATAGGTCAT 58.379 43.478 0.00 0.00 0.00 3.06
283 284 4.055710 TGTCAGGGTGTCTAATAGGTCA 57.944 45.455 0.00 0.00 0.00 4.02
284 285 4.649674 TCATGTCAGGGTGTCTAATAGGTC 59.350 45.833 0.00 0.00 0.00 3.85
285 286 4.620723 TCATGTCAGGGTGTCTAATAGGT 58.379 43.478 0.00 0.00 0.00 3.08
286 287 5.305386 TGATCATGTCAGGGTGTCTAATAGG 59.695 44.000 0.00 0.00 31.80 2.57
287 288 6.410942 TGATCATGTCAGGGTGTCTAATAG 57.589 41.667 0.00 0.00 31.80 1.73
288 289 6.806668 TTGATCATGTCAGGGTGTCTAATA 57.193 37.500 0.00 0.00 38.29 0.98
289 290 5.698741 TTGATCATGTCAGGGTGTCTAAT 57.301 39.130 0.00 0.00 38.29 1.73
290 291 5.497464 TTTGATCATGTCAGGGTGTCTAA 57.503 39.130 0.00 0.00 38.29 2.10
291 292 5.245531 GTTTTGATCATGTCAGGGTGTCTA 58.754 41.667 0.00 0.00 38.29 2.59
292 293 4.074970 GTTTTGATCATGTCAGGGTGTCT 58.925 43.478 0.00 0.00 38.29 3.41
293 294 3.120199 CGTTTTGATCATGTCAGGGTGTC 60.120 47.826 0.00 0.00 38.29 3.67
294 295 2.813754 CGTTTTGATCATGTCAGGGTGT 59.186 45.455 0.00 0.00 38.29 4.16
295 296 3.073678 TCGTTTTGATCATGTCAGGGTG 58.926 45.455 0.00 0.00 38.29 4.61
296 297 3.074412 GTCGTTTTGATCATGTCAGGGT 58.926 45.455 0.00 0.00 38.29 4.34
297 298 2.420022 GGTCGTTTTGATCATGTCAGGG 59.580 50.000 0.00 0.00 38.29 4.45
298 299 3.338249 AGGTCGTTTTGATCATGTCAGG 58.662 45.455 0.00 0.00 38.29 3.86
299 300 4.248859 AGAGGTCGTTTTGATCATGTCAG 58.751 43.478 0.00 0.00 38.29 3.51
300 301 4.271696 AGAGGTCGTTTTGATCATGTCA 57.728 40.909 0.00 0.00 34.25 3.58
301 302 4.567159 GGTAGAGGTCGTTTTGATCATGTC 59.433 45.833 0.00 0.00 0.00 3.06
302 303 4.223032 AGGTAGAGGTCGTTTTGATCATGT 59.777 41.667 0.00 0.00 0.00 3.21
303 304 4.759782 AGGTAGAGGTCGTTTTGATCATG 58.240 43.478 0.00 0.00 0.00 3.07
304 305 4.440250 CGAGGTAGAGGTCGTTTTGATCAT 60.440 45.833 0.00 0.00 0.00 2.45
305 306 3.119602 CGAGGTAGAGGTCGTTTTGATCA 60.120 47.826 0.00 0.00 0.00 2.92
306 307 3.436496 CGAGGTAGAGGTCGTTTTGATC 58.564 50.000 0.00 0.00 0.00 2.92
307 308 3.505464 CGAGGTAGAGGTCGTTTTGAT 57.495 47.619 0.00 0.00 0.00 2.57
314 315 1.135746 GTGTTGACGAGGTAGAGGTCG 60.136 57.143 0.00 0.00 42.04 4.79
315 316 2.633199 GTGTTGACGAGGTAGAGGTC 57.367 55.000 0.00 0.00 0.00 3.85
326 327 1.847818 TCTCTTTGTCCGTGTTGACG 58.152 50.000 0.00 0.00 45.67 4.35
327 328 5.235616 TGTTAATCTCTTTGTCCGTGTTGAC 59.764 40.000 0.00 0.00 35.77 3.18
328 329 5.361427 TGTTAATCTCTTTGTCCGTGTTGA 58.639 37.500 0.00 0.00 0.00 3.18
329 330 5.666969 TGTTAATCTCTTTGTCCGTGTTG 57.333 39.130 0.00 0.00 0.00 3.33
330 331 6.877611 AATGTTAATCTCTTTGTCCGTGTT 57.122 33.333 0.00 0.00 0.00 3.32
331 332 7.331193 GTCTAATGTTAATCTCTTTGTCCGTGT 59.669 37.037 0.00 0.00 0.00 4.49
332 333 7.330946 TGTCTAATGTTAATCTCTTTGTCCGTG 59.669 37.037 0.00 0.00 0.00 4.94
333 334 7.331193 GTGTCTAATGTTAATCTCTTTGTCCGT 59.669 37.037 0.00 0.00 0.00 4.69
334 335 7.545965 AGTGTCTAATGTTAATCTCTTTGTCCG 59.454 37.037 0.00 0.00 0.00 4.79
335 336 8.779354 AGTGTCTAATGTTAATCTCTTTGTCC 57.221 34.615 0.00 0.00 0.00 4.02
336 337 9.646427 AGAGTGTCTAATGTTAATCTCTTTGTC 57.354 33.333 0.00 0.00 0.00 3.18
337 338 9.646427 GAGAGTGTCTAATGTTAATCTCTTTGT 57.354 33.333 0.00 0.00 32.32 2.83
338 339 8.802856 CGAGAGTGTCTAATGTTAATCTCTTTG 58.197 37.037 0.00 0.00 32.32 2.77
339 340 7.489757 GCGAGAGTGTCTAATGTTAATCTCTTT 59.510 37.037 0.00 0.00 32.32 2.52
340 341 6.975772 GCGAGAGTGTCTAATGTTAATCTCTT 59.024 38.462 0.00 0.00 32.32 2.85
341 342 6.460399 GGCGAGAGTGTCTAATGTTAATCTCT 60.460 42.308 0.00 0.00 34.40 3.10
342 343 5.688176 GGCGAGAGTGTCTAATGTTAATCTC 59.312 44.000 0.00 0.00 0.00 2.75
343 344 5.361285 AGGCGAGAGTGTCTAATGTTAATCT 59.639 40.000 0.00 0.00 0.00 2.40
344 345 5.460419 CAGGCGAGAGTGTCTAATGTTAATC 59.540 44.000 0.00 0.00 0.00 1.75
345 346 5.127194 TCAGGCGAGAGTGTCTAATGTTAAT 59.873 40.000 0.00 0.00 0.00 1.40
346 347 4.461431 TCAGGCGAGAGTGTCTAATGTTAA 59.539 41.667 0.00 0.00 0.00 2.01
347 348 4.014406 TCAGGCGAGAGTGTCTAATGTTA 58.986 43.478 0.00 0.00 0.00 2.41
348 349 2.826128 TCAGGCGAGAGTGTCTAATGTT 59.174 45.455 0.00 0.00 0.00 2.71
349 350 2.447443 TCAGGCGAGAGTGTCTAATGT 58.553 47.619 0.00 0.00 0.00 2.71
350 351 3.443037 CTTCAGGCGAGAGTGTCTAATG 58.557 50.000 0.00 0.00 0.00 1.90
351 352 2.159170 GCTTCAGGCGAGAGTGTCTAAT 60.159 50.000 0.00 0.00 0.00 1.73
352 353 1.202582 GCTTCAGGCGAGAGTGTCTAA 59.797 52.381 0.00 0.00 0.00 2.10
353 354 0.811915 GCTTCAGGCGAGAGTGTCTA 59.188 55.000 0.00 0.00 0.00 2.59
354 355 1.589113 GCTTCAGGCGAGAGTGTCT 59.411 57.895 0.00 0.00 0.00 3.41
355 356 4.177229 GCTTCAGGCGAGAGTGTC 57.823 61.111 0.00 0.00 0.00 3.67
364 365 1.173913 ATGTTTAACCCGCTTCAGGC 58.826 50.000 0.00 0.00 37.64 4.85
365 366 4.457949 ACTTAATGTTTAACCCGCTTCAGG 59.542 41.667 0.00 0.00 0.00 3.86
366 367 5.180492 TCACTTAATGTTTAACCCGCTTCAG 59.820 40.000 0.00 0.00 0.00 3.02
367 368 5.064558 TCACTTAATGTTTAACCCGCTTCA 58.935 37.500 0.00 0.00 0.00 3.02
368 369 5.616488 TCACTTAATGTTTAACCCGCTTC 57.384 39.130 0.00 0.00 0.00 3.86
369 370 5.533528 AGTTCACTTAATGTTTAACCCGCTT 59.466 36.000 0.00 0.00 0.00 4.68
370 371 5.067954 AGTTCACTTAATGTTTAACCCGCT 58.932 37.500 0.00 0.00 0.00 5.52
371 372 5.366829 AGTTCACTTAATGTTTAACCCGC 57.633 39.130 0.00 0.00 0.00 6.13
372 373 9.902196 AAATTAGTTCACTTAATGTTTAACCCG 57.098 29.630 0.00 0.00 0.00 5.28
402 403 9.578439 GAAGTACGTATTTAACCAGTCATACTT 57.422 33.333 3.03 0.00 33.14 2.24
403 404 7.912250 CGAAGTACGTATTTAACCAGTCATACT 59.088 37.037 3.03 0.00 37.22 2.12
428 429 3.515330 AATGGTCTAACCGTAGAACCG 57.485 47.619 0.00 0.00 42.61 4.44
454 455 9.176460 GTCACCTTCTCAGTAACTTATACTAGT 57.824 37.037 0.00 0.00 0.00 2.57
455 456 9.175312 TGTCACCTTCTCAGTAACTTATACTAG 57.825 37.037 0.00 0.00 0.00 2.57
456 457 9.524496 TTGTCACCTTCTCAGTAACTTATACTA 57.476 33.333 0.00 0.00 0.00 1.82
548 558 3.322466 CTCCGGCCCAGTTGGACT 61.322 66.667 0.00 0.00 41.74 3.85
549 559 4.410400 CCTCCGGCCCAGTTGGAC 62.410 72.222 0.00 0.00 39.70 4.02
550 560 4.974438 ACCTCCGGCCCAGTTGGA 62.974 66.667 0.00 0.00 37.39 3.53
551 561 2.132089 TTAACCTCCGGCCCAGTTGG 62.132 60.000 0.00 0.00 37.09 3.77
552 562 0.034477 ATTAACCTCCGGCCCAGTTG 60.034 55.000 0.00 0.00 0.00 3.16
553 563 1.489230 CTATTAACCTCCGGCCCAGTT 59.511 52.381 0.00 0.00 0.00 3.16
554 564 1.129058 CTATTAACCTCCGGCCCAGT 58.871 55.000 0.00 0.00 0.00 4.00
555 565 0.250338 GCTATTAACCTCCGGCCCAG 60.250 60.000 0.00 0.00 0.00 4.45
560 570 2.353579 CGGTTTTGCTATTAACCTCCGG 59.646 50.000 0.00 0.00 41.30 5.14
586 597 1.520666 CCTCCGCCGGACTGTATTT 59.479 57.895 5.05 0.00 0.00 1.40
729 854 7.833390 GACACGGATTGACGAATACGAGTATAT 60.833 40.741 8.33 0.00 46.05 0.86
730 855 6.564686 GACACGGATTGACGAATACGAGTATA 60.565 42.308 8.33 0.00 46.05 1.47
731 856 5.785494 GACACGGATTGACGAATACGAGTAT 60.785 44.000 8.33 0.00 46.05 2.12
737 862 1.850441 CGGACACGGATTGACGAATAC 59.150 52.381 0.00 0.00 37.61 1.89
739 864 0.528924 TCGGACACGGATTGACGAAT 59.471 50.000 0.00 0.00 41.39 3.34
740 865 0.387622 GTCGGACACGGATTGACGAA 60.388 55.000 2.62 0.00 38.92 3.85
831 984 5.394738 TCTCCCTCGTCAATATATGGAAGT 58.605 41.667 3.35 0.00 0.00 3.01
832 985 5.105554 CCTCTCCCTCGTCAATATATGGAAG 60.106 48.000 0.00 0.00 0.00 3.46
833 986 4.772624 CCTCTCCCTCGTCAATATATGGAA 59.227 45.833 0.00 0.00 0.00 3.53
834 987 4.344978 CCTCTCCCTCGTCAATATATGGA 58.655 47.826 0.00 0.00 0.00 3.41
835 988 3.118956 GCCTCTCCCTCGTCAATATATGG 60.119 52.174 0.00 0.00 0.00 2.74
836 989 3.511540 TGCCTCTCCCTCGTCAATATATG 59.488 47.826 0.00 0.00 0.00 1.78
837 990 3.766591 CTGCCTCTCCCTCGTCAATATAT 59.233 47.826 0.00 0.00 0.00 0.86
857 1010 2.108514 CGTACACCATGGCCTGCTG 61.109 63.158 13.04 4.49 0.00 4.41
858 1011 2.244117 CTCGTACACCATGGCCTGCT 62.244 60.000 13.04 0.00 0.00 4.24
859 1012 1.815421 CTCGTACACCATGGCCTGC 60.815 63.158 13.04 0.00 0.00 4.85
982 1737 2.478335 ATTGATTCCGGTGGCGTGGT 62.478 55.000 0.00 0.00 0.00 4.16
990 1756 3.356529 AGAAGCTTCATTGATTCCGGT 57.643 42.857 27.57 0.00 33.33 5.28
999 1765 1.026718 CGGCCGGAAGAAGCTTCATT 61.027 55.000 27.57 17.92 0.00 2.57
1058 2008 2.763215 GGGCCTCCACACCATTGA 59.237 61.111 0.84 0.00 0.00 2.57
1230 2180 1.451207 CGGAAACCCATCGGCATCA 60.451 57.895 0.00 0.00 0.00 3.07
1398 2398 9.715121 AAGTTATCAATAAAACAACGAGTAGGA 57.285 29.630 0.00 0.00 0.00 2.94
1432 2444 2.743553 CTTCCTCCAATCCCAGCATTT 58.256 47.619 0.00 0.00 0.00 2.32
1527 2539 1.790755 GATGTACTGTCCAACACGCA 58.209 50.000 0.00 0.00 0.00 5.24
1575 2587 7.750229 TGAGCATCTTCTTGAAAGTGTAAAT 57.250 32.000 0.00 0.00 34.92 1.40
1578 2590 5.702670 CCTTGAGCATCTTCTTGAAAGTGTA 59.297 40.000 0.00 0.00 34.92 2.90
1654 4931 1.153628 GCATAGTCGTTGCCGGAGT 60.154 57.895 5.05 0.00 33.95 3.85
1695 4972 0.462047 CTCACATCGTTGGGGCTACC 60.462 60.000 0.00 0.00 40.81 3.18
1874 5162 0.178990 ACCTTTGTCACCCCAAGCTC 60.179 55.000 0.00 0.00 0.00 4.09
1990 5278 7.822334 ACTTGTTTCAGATTATCGTTGTGGATA 59.178 33.333 0.00 0.00 0.00 2.59
2204 5504 6.364701 TGAGCCTTTACCTACATTAATGCAT 58.635 36.000 15.48 0.00 0.00 3.96
2307 5608 2.722201 GCTCCCCGGATGACTCGTT 61.722 63.158 0.73 0.00 0.00 3.85
2320 5621 1.344763 ACACAGTGTACAGAAGCTCCC 59.655 52.381 3.69 0.00 0.00 4.30
2375 5676 2.191908 GCATGGGTCGGGTGCATA 59.808 61.111 0.00 0.00 38.68 3.14
2607 5915 3.311091 TGCGGGGGTATAGAGTTATGTT 58.689 45.455 0.00 0.00 0.00 2.71
2652 5960 2.685850 AGAAAAAGGTATCGGTCCCG 57.314 50.000 0.00 0.00 41.35 5.14
2663 5971 5.587289 TCGTGGATTGTTTGAAGAAAAAGG 58.413 37.500 0.00 0.00 0.00 3.11
2746 6056 6.872547 CCTTTAGTCCAAGGTTAGTGAACTAC 59.127 42.308 0.00 0.00 38.92 2.73
2747 6057 7.001099 CCTTTAGTCCAAGGTTAGTGAACTA 57.999 40.000 0.00 0.00 38.92 2.24
2748 6058 5.866207 CCTTTAGTCCAAGGTTAGTGAACT 58.134 41.667 0.00 0.00 38.92 3.01
2759 6069 3.374058 CCGCATGTAACCTTTAGTCCAAG 59.626 47.826 0.00 0.00 0.00 3.61
2760 6070 3.244630 ACCGCATGTAACCTTTAGTCCAA 60.245 43.478 0.00 0.00 0.00 3.53
3083 6561 0.037882 CTGTCTCTGGCGTGTGTCAT 60.038 55.000 0.00 0.00 0.00 3.06
3106 6585 8.660373 GGAAATTTATATCACTAGCTCAATCGG 58.340 37.037 0.00 0.00 0.00 4.18
3136 6615 5.583854 ACTGTCAACTTATCAGCATAGCTTG 59.416 40.000 0.00 0.00 36.40 4.01
3138 6617 5.350504 ACTGTCAACTTATCAGCATAGCT 57.649 39.130 0.00 0.00 40.77 3.32
3139 6618 6.042777 TGTACTGTCAACTTATCAGCATAGC 58.957 40.000 0.00 0.00 33.12 2.97
3140 6619 8.546244 CAATGTACTGTCAACTTATCAGCATAG 58.454 37.037 0.00 0.00 33.12 2.23
3141 6620 8.257306 TCAATGTACTGTCAACTTATCAGCATA 58.743 33.333 0.00 0.00 33.12 3.14
3170 6652 2.037144 GCTTGATTGCCTCCATGGATT 58.963 47.619 16.63 0.00 38.35 3.01
3225 6707 9.383519 TCAGATTTTCAGAGTATAACCATCAAC 57.616 33.333 0.00 0.00 0.00 3.18
3256 6738 4.727792 TCCATGGCTCCATATTCATTCA 57.272 40.909 6.96 0.00 34.91 2.57
3257 6739 4.461781 CCTTCCATGGCTCCATATTCATTC 59.538 45.833 6.96 0.00 34.91 2.67
3258 6740 4.106825 TCCTTCCATGGCTCCATATTCATT 59.893 41.667 6.96 0.00 34.91 2.57
3272 6778 3.535561 GGGCGTATATCATCCTTCCATG 58.464 50.000 0.00 0.00 0.00 3.66
3273 6779 2.505819 GGGGCGTATATCATCCTTCCAT 59.494 50.000 0.00 0.00 0.00 3.41
3274 6780 1.906574 GGGGCGTATATCATCCTTCCA 59.093 52.381 0.00 0.00 0.00 3.53
3275 6781 1.906574 TGGGGCGTATATCATCCTTCC 59.093 52.381 0.00 0.00 0.00 3.46
3276 6782 2.567615 AGTGGGGCGTATATCATCCTTC 59.432 50.000 0.00 0.00 0.00 3.46
3277 6783 2.567615 GAGTGGGGCGTATATCATCCTT 59.432 50.000 0.00 0.00 0.00 3.36
3278 6784 2.180276 GAGTGGGGCGTATATCATCCT 58.820 52.381 0.00 0.00 0.00 3.24
3279 6785 1.207329 GGAGTGGGGCGTATATCATCC 59.793 57.143 0.00 0.00 0.00 3.51
3283 6789 0.608640 CCTGGAGTGGGGCGTATATC 59.391 60.000 0.00 0.00 0.00 1.63
3284 6790 0.105142 ACCTGGAGTGGGGCGTATAT 60.105 55.000 0.00 0.00 0.00 0.86
3285 6791 0.757935 GACCTGGAGTGGGGCGTATA 60.758 60.000 0.00 0.00 0.00 1.47
3286 6792 2.040606 ACCTGGAGTGGGGCGTAT 59.959 61.111 0.00 0.00 0.00 3.06
3287 6793 2.682494 GACCTGGAGTGGGGCGTA 60.682 66.667 0.00 0.00 0.00 4.42
3288 6794 4.640690 AGACCTGGAGTGGGGCGT 62.641 66.667 0.00 0.00 36.86 5.68
3289 6795 3.316573 GAAGACCTGGAGTGGGGCG 62.317 68.421 0.00 0.00 36.86 6.13
3290 6796 2.671682 GAAGACCTGGAGTGGGGC 59.328 66.667 0.00 0.00 0.00 5.80
3291 6797 2.301738 GGGAAGACCTGGAGTGGGG 61.302 68.421 0.00 0.00 35.85 4.96
3292 6798 3.404773 GGGAAGACCTGGAGTGGG 58.595 66.667 0.00 0.00 35.85 4.61
3401 6914 2.031420 CAGTTGTTGTGTGCATGAGAGG 60.031 50.000 0.00 0.00 0.00 3.69
3402 6915 2.603892 GCAGTTGTTGTGTGCATGAGAG 60.604 50.000 0.00 0.00 37.16 3.20
3403 6916 1.334556 GCAGTTGTTGTGTGCATGAGA 59.665 47.619 0.00 0.00 37.16 3.27
3404 6917 1.601162 GGCAGTTGTTGTGTGCATGAG 60.601 52.381 0.00 0.00 39.05 2.90
3405 6918 0.385029 GGCAGTTGTTGTGTGCATGA 59.615 50.000 0.00 0.00 39.05 3.07
3406 6919 0.598158 GGGCAGTTGTTGTGTGCATG 60.598 55.000 0.00 0.00 39.05 4.06
3407 6920 1.042003 TGGGCAGTTGTTGTGTGCAT 61.042 50.000 0.00 0.00 39.05 3.96
3408 6921 1.042003 ATGGGCAGTTGTTGTGTGCA 61.042 50.000 0.00 0.00 39.05 4.57
3409 6922 0.598158 CATGGGCAGTTGTTGTGTGC 60.598 55.000 0.00 0.00 36.42 4.57
3410 6923 0.598158 GCATGGGCAGTTGTTGTGTG 60.598 55.000 0.00 0.00 40.72 3.82
3411 6924 0.756442 AGCATGGGCAGTTGTTGTGT 60.756 50.000 0.00 0.00 44.61 3.72
3412 6925 0.319211 CAGCATGGGCAGTTGTTGTG 60.319 55.000 0.00 0.00 44.61 3.33
3413 6926 0.467844 TCAGCATGGGCAGTTGTTGT 60.468 50.000 0.00 0.00 44.61 3.32
3414 6927 0.892755 ATCAGCATGGGCAGTTGTTG 59.107 50.000 0.00 0.00 44.61 3.33
3415 6928 1.636148 AATCAGCATGGGCAGTTGTT 58.364 45.000 0.00 0.00 44.61 2.83
3416 6929 2.372264 CTAATCAGCATGGGCAGTTGT 58.628 47.619 0.00 0.00 44.61 3.32
3417 6930 1.679680 CCTAATCAGCATGGGCAGTTG 59.320 52.381 0.00 0.00 44.61 3.16
3418 6931 1.565759 TCCTAATCAGCATGGGCAGTT 59.434 47.619 0.00 0.00 44.61 3.16
3419 6932 1.142465 CTCCTAATCAGCATGGGCAGT 59.858 52.381 0.00 0.00 44.61 4.40
3420 6933 1.419012 TCTCCTAATCAGCATGGGCAG 59.581 52.381 0.00 0.00 44.61 4.85
3421 6934 1.419012 CTCTCCTAATCAGCATGGGCA 59.581 52.381 0.00 0.00 44.61 5.36
3422 6935 1.271271 CCTCTCCTAATCAGCATGGGC 60.271 57.143 0.00 0.00 41.61 5.36
3423 6936 1.350351 CCCTCTCCTAATCAGCATGGG 59.650 57.143 0.00 0.00 36.16 4.00
3424 6937 1.350351 CCCCTCTCCTAATCAGCATGG 59.650 57.143 0.00 0.00 36.16 3.66
3425 6938 1.271271 GCCCCTCTCCTAATCAGCATG 60.271 57.143 0.00 0.00 37.54 4.06
3426 6939 1.063183 GCCCCTCTCCTAATCAGCAT 58.937 55.000 0.00 0.00 0.00 3.79
3427 6940 0.326522 TGCCCCTCTCCTAATCAGCA 60.327 55.000 0.00 0.00 0.00 4.41
3428 6941 0.839946 TTGCCCCTCTCCTAATCAGC 59.160 55.000 0.00 0.00 0.00 4.26
3429 6942 2.239654 TGTTTGCCCCTCTCCTAATCAG 59.760 50.000 0.00 0.00 0.00 2.90
3430 6943 2.274542 TGTTTGCCCCTCTCCTAATCA 58.725 47.619 0.00 0.00 0.00 2.57
3431 6944 3.366052 TTGTTTGCCCCTCTCCTAATC 57.634 47.619 0.00 0.00 0.00 1.75
3432 6945 3.076032 ACTTTGTTTGCCCCTCTCCTAAT 59.924 43.478 0.00 0.00 0.00 1.73
3433 6946 2.445525 ACTTTGTTTGCCCCTCTCCTAA 59.554 45.455 0.00 0.00 0.00 2.69
3434 6947 2.062636 ACTTTGTTTGCCCCTCTCCTA 58.937 47.619 0.00 0.00 0.00 2.94
3435 6948 0.853530 ACTTTGTTTGCCCCTCTCCT 59.146 50.000 0.00 0.00 0.00 3.69
3436 6949 0.961753 CACTTTGTTTGCCCCTCTCC 59.038 55.000 0.00 0.00 0.00 3.71
3437 6950 0.961753 CCACTTTGTTTGCCCCTCTC 59.038 55.000 0.00 0.00 0.00 3.20
3438 6951 3.131850 CCACTTTGTTTGCCCCTCT 57.868 52.632 0.00 0.00 0.00 3.69


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.