Multiple sequence alignment - TraesCS3A01G510500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G510500 chr3A 100.000 3272 0 0 1 3272 730384054 730387325 0.000000e+00 6043
1 TraesCS3A01G510500 chr2B 94.759 2652 113 8 507 3135 674297055 674294407 0.000000e+00 4104
2 TraesCS3A01G510500 chr2B 93.156 2148 113 13 1153 3272 38060951 38058810 0.000000e+00 3121
3 TraesCS3A01G510500 chr2B 86.325 468 44 9 708 1175 38061417 38060970 2.930000e-135 492
4 TraesCS3A01G510500 chr2A 94.694 2582 117 6 708 3270 628363719 628361139 0.000000e+00 3991
5 TraesCS3A01G510500 chr2A 92.697 178 10 3 502 678 536189427 536189602 1.510000e-63 254
6 TraesCS3A01G510500 chr2A 92.982 171 12 0 508 678 770399247 770399077 1.950000e-62 250
7 TraesCS3A01G510500 chr6B 96.182 1886 53 6 1401 3269 471179244 471177361 0.000000e+00 3066
8 TraesCS3A01G510500 chr6B 92.516 481 24 2 709 1189 471180328 471179860 0.000000e+00 678
9 TraesCS3A01G510500 chr6B 87.420 469 38 4 708 1175 157568370 157567922 1.350000e-143 520
10 TraesCS3A01G510500 chr7B 92.577 2142 124 16 1153 3268 149938392 149936260 0.000000e+00 3042
11 TraesCS3A01G510500 chr7B 95.845 1757 56 4 1531 3270 645515182 645513426 0.000000e+00 2824
12 TraesCS3A01G510500 chr7B 94.061 825 38 2 708 1532 645516119 645515306 0.000000e+00 1242
13 TraesCS3A01G510500 chr7B 84.615 468 53 8 708 1175 149938859 149938411 6.440000e-122 448
14 TraesCS3A01G510500 chr7B 88.770 187 16 5 495 678 677884024 677884208 1.180000e-54 224
15 TraesCS3A01G510500 chr7A 96.542 1706 55 3 1569 3270 439786338 439784633 0.000000e+00 2820
16 TraesCS3A01G510500 chr7A 95.636 825 36 0 708 1532 439787338 439786514 0.000000e+00 1325
17 TraesCS3A01G510500 chr7A 93.023 172 12 0 507 678 40376424 40376253 5.420000e-63 252
18 TraesCS3A01G510500 chr5A 95.563 1758 60 5 1531 3270 311019719 311017962 0.000000e+00 2798
19 TraesCS3A01G510500 chr5A 93.697 825 41 2 708 1532 311020656 311019843 0.000000e+00 1225
20 TraesCS3A01G510500 chr5A 90.341 176 17 0 503 678 198144651 198144826 7.060000e-57 231
21 TraesCS3A01G510500 chr5A 91.566 166 13 1 501 666 673723259 673723423 9.130000e-56 228
22 TraesCS3A01G510500 chr6A 98.082 1564 30 0 780 2343 550724657 550723094 0.000000e+00 2723
23 TraesCS3A01G510500 chr6A 94.224 277 16 0 507 783 550729820 550729544 1.090000e-114 424
24 TraesCS3A01G510500 chr4A 96.368 936 31 3 2338 3270 699610129 699611064 0.000000e+00 1537
25 TraesCS3A01G510500 chr5B 93.939 825 39 2 708 1532 394252675 394253488 0.000000e+00 1236
26 TraesCS3A01G510500 chr5B 97.113 381 11 0 1152 1532 394255766 394256146 0.000000e+00 643
27 TraesCS3A01G510500 chr1A 91.667 168 14 0 507 674 27513947 27513780 1.960000e-57 233
28 TraesCS3A01G510500 chr3D 88.820 161 13 4 350 505 600547694 600547534 3.330000e-45 193


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G510500 chr3A 730384054 730387325 3271 False 6043.0 6043 100.0000 1 3272 1 chr3A.!!$F1 3271
1 TraesCS3A01G510500 chr2B 674294407 674297055 2648 True 4104.0 4104 94.7590 507 3135 1 chr2B.!!$R1 2628
2 TraesCS3A01G510500 chr2B 38058810 38061417 2607 True 1806.5 3121 89.7405 708 3272 2 chr2B.!!$R2 2564
3 TraesCS3A01G510500 chr2A 628361139 628363719 2580 True 3991.0 3991 94.6940 708 3270 1 chr2A.!!$R1 2562
4 TraesCS3A01G510500 chr6B 471177361 471180328 2967 True 1872.0 3066 94.3490 709 3269 2 chr6B.!!$R2 2560
5 TraesCS3A01G510500 chr7B 645513426 645516119 2693 True 2033.0 2824 94.9530 708 3270 2 chr7B.!!$R2 2562
6 TraesCS3A01G510500 chr7B 149936260 149938859 2599 True 1745.0 3042 88.5960 708 3268 2 chr7B.!!$R1 2560
7 TraesCS3A01G510500 chr7A 439784633 439787338 2705 True 2072.5 2820 96.0890 708 3270 2 chr7A.!!$R2 2562
8 TraesCS3A01G510500 chr5A 311017962 311020656 2694 True 2011.5 2798 94.6300 708 3270 2 chr5A.!!$R1 2562
9 TraesCS3A01G510500 chr6A 550723094 550724657 1563 True 2723.0 2723 98.0820 780 2343 1 chr6A.!!$R1 1563
10 TraesCS3A01G510500 chr4A 699610129 699611064 935 False 1537.0 1537 96.3680 2338 3270 1 chr4A.!!$F1 932
11 TraesCS3A01G510500 chr5B 394252675 394256146 3471 False 939.5 1236 95.5260 708 1532 2 chr5B.!!$F1 824

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
277 278 0.036105 ATGCACGCCTCATGTCTGAA 60.036 50.0 0.00 0.0 0.0 3.02 F
325 326 0.109153 CATGCATCTCCCCGGATCAA 59.891 55.0 0.73 0.0 0.0 2.57 F
1069 1093 0.245539 CGGGTTCTGCTTCCTTACGA 59.754 55.0 0.00 0.0 0.0 3.43 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1335 1788 1.405661 GGTAACCTGACTGTAGCTGCC 60.406 57.143 0.0 0.0 0.0 4.85 R
1367 1820 5.971763 ACATACAGAGATCAGAACCAAGAC 58.028 41.667 0.0 0.0 0.0 3.01 R
3061 3743 0.827368 GATCTTTGCGACCCCTCTCT 59.173 55.000 0.0 0.0 0.0 3.10 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.461695 TCTTTGCCCTGGACAAAAACA 58.538 42.857 9.48 0.00 36.63 2.83
21 22 2.430332 TCTTTGCCCTGGACAAAAACAG 59.570 45.455 9.48 0.00 36.63 3.16
22 23 1.859302 TTGCCCTGGACAAAAACAGT 58.141 45.000 0.00 0.00 32.90 3.55
23 24 1.398692 TGCCCTGGACAAAAACAGTC 58.601 50.000 0.00 0.00 32.90 3.51
34 35 6.976636 GACAAAAACAGTCCCAATTTCAAA 57.023 33.333 0.00 0.00 0.00 2.69
35 36 6.735678 ACAAAAACAGTCCCAATTTCAAAC 57.264 33.333 0.00 0.00 0.00 2.93
36 37 6.234177 ACAAAAACAGTCCCAATTTCAAACA 58.766 32.000 0.00 0.00 0.00 2.83
37 38 6.712547 ACAAAAACAGTCCCAATTTCAAACAA 59.287 30.769 0.00 0.00 0.00 2.83
38 39 7.229506 ACAAAAACAGTCCCAATTTCAAACAAA 59.770 29.630 0.00 0.00 0.00 2.83
39 40 6.735678 AAACAGTCCCAATTTCAAACAAAC 57.264 33.333 0.00 0.00 0.00 2.93
40 41 5.675684 ACAGTCCCAATTTCAAACAAACT 57.324 34.783 0.00 0.00 0.00 2.66
41 42 6.783708 ACAGTCCCAATTTCAAACAAACTA 57.216 33.333 0.00 0.00 0.00 2.24
42 43 7.176589 ACAGTCCCAATTTCAAACAAACTAA 57.823 32.000 0.00 0.00 0.00 2.24
43 44 7.791029 ACAGTCCCAATTTCAAACAAACTAAT 58.209 30.769 0.00 0.00 0.00 1.73
44 45 7.710475 ACAGTCCCAATTTCAAACAAACTAATG 59.290 33.333 0.00 0.00 0.00 1.90
45 46 6.705825 AGTCCCAATTTCAAACAAACTAATGC 59.294 34.615 0.00 0.00 0.00 3.56
46 47 6.705825 GTCCCAATTTCAAACAAACTAATGCT 59.294 34.615 0.00 0.00 0.00 3.79
47 48 7.870445 GTCCCAATTTCAAACAAACTAATGCTA 59.130 33.333 0.00 0.00 0.00 3.49
48 49 7.870445 TCCCAATTTCAAACAAACTAATGCTAC 59.130 33.333 0.00 0.00 0.00 3.58
49 50 7.117667 CCCAATTTCAAACAAACTAATGCTACC 59.882 37.037 0.00 0.00 0.00 3.18
50 51 7.148820 CCAATTTCAAACAAACTAATGCTACCG 60.149 37.037 0.00 0.00 0.00 4.02
51 52 6.380095 TTTCAAACAAACTAATGCTACCGT 57.620 33.333 0.00 0.00 0.00 4.83
52 53 5.351233 TCAAACAAACTAATGCTACCGTG 57.649 39.130 0.00 0.00 0.00 4.94
53 54 4.817464 TCAAACAAACTAATGCTACCGTGT 59.183 37.500 0.00 0.00 0.00 4.49
54 55 5.297278 TCAAACAAACTAATGCTACCGTGTT 59.703 36.000 0.00 0.00 0.00 3.32
55 56 5.352643 AACAAACTAATGCTACCGTGTTC 57.647 39.130 0.00 0.00 0.00 3.18
56 57 4.382291 ACAAACTAATGCTACCGTGTTCA 58.618 39.130 0.00 0.00 0.00 3.18
57 58 4.817464 ACAAACTAATGCTACCGTGTTCAA 59.183 37.500 0.00 0.00 0.00 2.69
58 59 5.472137 ACAAACTAATGCTACCGTGTTCAAT 59.528 36.000 0.00 0.00 0.00 2.57
59 60 5.545658 AACTAATGCTACCGTGTTCAATG 57.454 39.130 0.00 0.00 0.00 2.82
60 61 4.827692 ACTAATGCTACCGTGTTCAATGA 58.172 39.130 0.00 0.00 0.00 2.57
61 62 5.428253 ACTAATGCTACCGTGTTCAATGAT 58.572 37.500 0.00 0.00 0.00 2.45
62 63 5.880332 ACTAATGCTACCGTGTTCAATGATT 59.120 36.000 0.00 0.00 0.00 2.57
63 64 4.621068 ATGCTACCGTGTTCAATGATTG 57.379 40.909 0.00 0.00 0.00 2.67
64 65 3.407698 TGCTACCGTGTTCAATGATTGT 58.592 40.909 4.93 0.00 0.00 2.71
65 66 4.570930 TGCTACCGTGTTCAATGATTGTA 58.429 39.130 4.93 0.00 0.00 2.41
66 67 5.182487 TGCTACCGTGTTCAATGATTGTAT 58.818 37.500 4.93 0.00 0.00 2.29
67 68 5.293324 TGCTACCGTGTTCAATGATTGTATC 59.707 40.000 4.93 0.00 0.00 2.24
68 69 4.857871 ACCGTGTTCAATGATTGTATCG 57.142 40.909 4.93 5.46 0.00 2.92
69 70 4.500127 ACCGTGTTCAATGATTGTATCGA 58.500 39.130 4.93 0.00 0.00 3.59
70 71 4.328983 ACCGTGTTCAATGATTGTATCGAC 59.671 41.667 4.93 0.00 0.00 4.20
71 72 4.328712 CCGTGTTCAATGATTGTATCGACA 59.671 41.667 4.93 1.95 0.00 4.35
80 81 2.218953 TTGTATCGACAATCTCGGCC 57.781 50.000 0.00 0.00 40.72 6.13
81 82 1.399714 TGTATCGACAATCTCGGCCT 58.600 50.000 0.00 0.00 43.16 5.19
82 83 1.067060 TGTATCGACAATCTCGGCCTG 59.933 52.381 0.00 0.00 43.16 4.85
83 84 1.337071 GTATCGACAATCTCGGCCTGA 59.663 52.381 0.00 0.00 43.16 3.86
84 85 1.043816 ATCGACAATCTCGGCCTGAT 58.956 50.000 0.00 1.17 43.16 2.90
85 86 0.385751 TCGACAATCTCGGCCTGATC 59.614 55.000 0.00 0.00 43.16 2.92
86 87 0.103026 CGACAATCTCGGCCTGATCA 59.897 55.000 0.00 0.00 38.87 2.92
87 88 1.471501 CGACAATCTCGGCCTGATCAA 60.472 52.381 0.00 0.00 38.87 2.57
88 89 2.632377 GACAATCTCGGCCTGATCAAA 58.368 47.619 0.00 0.00 0.00 2.69
89 90 3.009723 GACAATCTCGGCCTGATCAAAA 58.990 45.455 0.00 0.00 0.00 2.44
90 91 3.624777 ACAATCTCGGCCTGATCAAAAT 58.375 40.909 0.00 0.00 0.00 1.82
91 92 3.629398 ACAATCTCGGCCTGATCAAAATC 59.371 43.478 0.00 0.00 0.00 2.17
92 93 1.939974 TCTCGGCCTGATCAAAATCG 58.060 50.000 0.00 0.00 34.39 3.34
93 94 0.305922 CTCGGCCTGATCAAAATCGC 59.694 55.000 0.00 0.00 34.39 4.58
94 95 0.392327 TCGGCCTGATCAAAATCGCA 60.392 50.000 0.00 0.00 34.39 5.10
95 96 0.248215 CGGCCTGATCAAAATCGCAC 60.248 55.000 0.00 0.00 34.39 5.34
96 97 1.098050 GGCCTGATCAAAATCGCACT 58.902 50.000 0.00 0.00 34.39 4.40
97 98 1.064654 GGCCTGATCAAAATCGCACTC 59.935 52.381 0.00 0.00 34.39 3.51
98 99 1.064654 GCCTGATCAAAATCGCACTCC 59.935 52.381 0.00 0.00 34.39 3.85
99 100 2.636830 CCTGATCAAAATCGCACTCCT 58.363 47.619 0.00 0.00 34.39 3.69
100 101 3.012518 CCTGATCAAAATCGCACTCCTT 58.987 45.455 0.00 0.00 34.39 3.36
101 102 3.181503 CCTGATCAAAATCGCACTCCTTG 60.182 47.826 0.00 0.00 34.39 3.61
102 103 3.673902 TGATCAAAATCGCACTCCTTGA 58.326 40.909 0.00 0.00 34.39 3.02
103 104 3.436704 TGATCAAAATCGCACTCCTTGAC 59.563 43.478 0.00 0.00 34.39 3.18
104 105 3.126001 TCAAAATCGCACTCCTTGACT 57.874 42.857 0.00 0.00 0.00 3.41
105 106 4.265904 TCAAAATCGCACTCCTTGACTA 57.734 40.909 0.00 0.00 0.00 2.59
106 107 3.994392 TCAAAATCGCACTCCTTGACTAC 59.006 43.478 0.00 0.00 0.00 2.73
107 108 3.963428 AAATCGCACTCCTTGACTACT 57.037 42.857 0.00 0.00 0.00 2.57
108 109 2.949451 ATCGCACTCCTTGACTACTG 57.051 50.000 0.00 0.00 0.00 2.74
109 110 0.888619 TCGCACTCCTTGACTACTGG 59.111 55.000 0.00 0.00 0.00 4.00
110 111 0.603569 CGCACTCCTTGACTACTGGT 59.396 55.000 0.00 0.00 0.00 4.00
111 112 1.000955 CGCACTCCTTGACTACTGGTT 59.999 52.381 0.00 0.00 0.00 3.67
112 113 2.230508 CGCACTCCTTGACTACTGGTTA 59.769 50.000 0.00 0.00 0.00 2.85
113 114 3.119101 CGCACTCCTTGACTACTGGTTAT 60.119 47.826 0.00 0.00 0.00 1.89
114 115 4.620803 CGCACTCCTTGACTACTGGTTATT 60.621 45.833 0.00 0.00 0.00 1.40
115 116 5.246307 GCACTCCTTGACTACTGGTTATTT 58.754 41.667 0.00 0.00 0.00 1.40
116 117 5.122396 GCACTCCTTGACTACTGGTTATTTG 59.878 44.000 0.00 0.00 0.00 2.32
117 118 6.464222 CACTCCTTGACTACTGGTTATTTGA 58.536 40.000 0.00 0.00 0.00 2.69
118 119 7.106239 CACTCCTTGACTACTGGTTATTTGAT 58.894 38.462 0.00 0.00 0.00 2.57
119 120 8.258007 CACTCCTTGACTACTGGTTATTTGATA 58.742 37.037 0.00 0.00 0.00 2.15
120 121 8.993424 ACTCCTTGACTACTGGTTATTTGATAT 58.007 33.333 0.00 0.00 0.00 1.63
130 131 8.882415 ACTGGTTATTTGATATAGTAACCGTG 57.118 34.615 8.20 6.56 45.69 4.94
131 132 8.698210 ACTGGTTATTTGATATAGTAACCGTGA 58.302 33.333 8.20 0.00 45.69 4.35
132 133 8.876275 TGGTTATTTGATATAGTAACCGTGAC 57.124 34.615 8.20 0.00 45.69 3.67
133 134 7.927629 TGGTTATTTGATATAGTAACCGTGACC 59.072 37.037 8.20 0.00 45.69 4.02
134 135 7.927629 GGTTATTTGATATAGTAACCGTGACCA 59.072 37.037 0.00 0.00 37.43 4.02
135 136 9.485206 GTTATTTGATATAGTAACCGTGACCAT 57.515 33.333 0.00 0.00 0.00 3.55
136 137 7.962964 ATTTGATATAGTAACCGTGACCATG 57.037 36.000 0.00 0.00 0.00 3.66
137 138 4.878439 TGATATAGTAACCGTGACCATGC 58.122 43.478 0.00 0.00 0.00 4.06
138 139 2.614829 ATAGTAACCGTGACCATGCC 57.385 50.000 0.00 0.00 0.00 4.40
139 140 1.268066 TAGTAACCGTGACCATGCCA 58.732 50.000 0.00 0.00 0.00 4.92
140 141 0.321298 AGTAACCGTGACCATGCCAC 60.321 55.000 6.44 6.44 0.00 5.01
145 146 2.870372 GTGACCATGCCACGCTTC 59.130 61.111 1.55 0.00 0.00 3.86
146 147 1.965930 GTGACCATGCCACGCTTCA 60.966 57.895 1.55 0.00 0.00 3.02
147 148 1.228094 TGACCATGCCACGCTTCAA 60.228 52.632 0.00 0.00 0.00 2.69
148 149 0.821301 TGACCATGCCACGCTTCAAA 60.821 50.000 0.00 0.00 0.00 2.69
149 150 0.313672 GACCATGCCACGCTTCAAAA 59.686 50.000 0.00 0.00 0.00 2.44
150 151 0.749649 ACCATGCCACGCTTCAAAAA 59.250 45.000 0.00 0.00 0.00 1.94
151 152 1.139163 CCATGCCACGCTTCAAAAAC 58.861 50.000 0.00 0.00 0.00 2.43
152 153 1.269726 CCATGCCACGCTTCAAAAACT 60.270 47.619 0.00 0.00 0.00 2.66
153 154 2.030363 CCATGCCACGCTTCAAAAACTA 60.030 45.455 0.00 0.00 0.00 2.24
154 155 3.236816 CATGCCACGCTTCAAAAACTAG 58.763 45.455 0.00 0.00 0.00 2.57
155 156 2.566913 TGCCACGCTTCAAAAACTAGA 58.433 42.857 0.00 0.00 0.00 2.43
156 157 3.146066 TGCCACGCTTCAAAAACTAGAT 58.854 40.909 0.00 0.00 0.00 1.98
157 158 3.568007 TGCCACGCTTCAAAAACTAGATT 59.432 39.130 0.00 0.00 0.00 2.40
158 159 3.914364 GCCACGCTTCAAAAACTAGATTG 59.086 43.478 0.00 0.00 0.00 2.67
159 160 4.475944 CCACGCTTCAAAAACTAGATTGG 58.524 43.478 0.00 0.00 0.00 3.16
160 161 4.475944 CACGCTTCAAAAACTAGATTGGG 58.524 43.478 0.00 0.00 0.00 4.12
161 162 4.023193 CACGCTTCAAAAACTAGATTGGGT 60.023 41.667 0.00 0.00 0.00 4.51
162 163 4.023193 ACGCTTCAAAAACTAGATTGGGTG 60.023 41.667 0.00 5.50 0.00 4.61
163 164 4.215399 CGCTTCAAAAACTAGATTGGGTGA 59.785 41.667 0.00 0.00 0.00 4.02
164 165 5.106157 CGCTTCAAAAACTAGATTGGGTGAT 60.106 40.000 0.00 0.00 0.00 3.06
165 166 6.325596 GCTTCAAAAACTAGATTGGGTGATC 58.674 40.000 0.00 0.00 0.00 2.92
166 167 6.071952 GCTTCAAAAACTAGATTGGGTGATCA 60.072 38.462 0.00 0.00 0.00 2.92
167 168 7.523709 GCTTCAAAAACTAGATTGGGTGATCAA 60.524 37.037 0.00 0.00 0.00 2.57
168 169 7.831691 TCAAAAACTAGATTGGGTGATCAAA 57.168 32.000 0.00 0.00 0.00 2.69
169 170 8.243961 TCAAAAACTAGATTGGGTGATCAAAA 57.756 30.769 0.00 0.00 0.00 2.44
170 171 8.141268 TCAAAAACTAGATTGGGTGATCAAAAC 58.859 33.333 0.00 0.00 0.00 2.43
171 172 6.590234 AAACTAGATTGGGTGATCAAAACC 57.410 37.500 0.00 0.72 36.94 3.27
172 173 5.255397 ACTAGATTGGGTGATCAAAACCA 57.745 39.130 10.14 10.14 39.65 3.67
173 174 5.640147 ACTAGATTGGGTGATCAAAACCAA 58.360 37.500 22.52 22.52 45.99 3.67
176 177 3.399440 TTGGGTGATCAAAACCAATGC 57.601 42.857 18.63 0.00 39.65 3.56
177 178 1.622811 TGGGTGATCAAAACCAATGCC 59.377 47.619 11.43 0.00 39.65 4.40
178 179 1.066215 GGGTGATCAAAACCAATGCCC 60.066 52.381 0.00 0.00 39.65 5.36
179 180 1.622811 GGTGATCAAAACCAATGCCCA 59.377 47.619 0.00 0.00 37.65 5.36
180 181 2.038295 GGTGATCAAAACCAATGCCCAA 59.962 45.455 0.00 0.00 37.65 4.12
181 182 3.328505 GTGATCAAAACCAATGCCCAAG 58.671 45.455 0.00 0.00 0.00 3.61
182 183 3.006752 GTGATCAAAACCAATGCCCAAGA 59.993 43.478 0.00 0.00 0.00 3.02
183 184 3.839490 TGATCAAAACCAATGCCCAAGAT 59.161 39.130 0.00 0.00 0.00 2.40
184 185 3.959535 TCAAAACCAATGCCCAAGATC 57.040 42.857 0.00 0.00 0.00 2.75
185 186 2.230992 TCAAAACCAATGCCCAAGATCG 59.769 45.455 0.00 0.00 0.00 3.69
186 187 0.532115 AAACCAATGCCCAAGATCGC 59.468 50.000 0.00 0.00 0.00 4.58
187 188 0.323725 AACCAATGCCCAAGATCGCT 60.324 50.000 0.00 0.00 0.00 4.93
188 189 0.749454 ACCAATGCCCAAGATCGCTC 60.749 55.000 0.00 0.00 0.00 5.03
189 190 0.465097 CCAATGCCCAAGATCGCTCT 60.465 55.000 0.00 0.00 0.00 4.09
190 191 1.386533 CAATGCCCAAGATCGCTCTT 58.613 50.000 0.00 0.00 42.59 2.85
191 192 1.332997 CAATGCCCAAGATCGCTCTTC 59.667 52.381 0.00 0.00 39.78 2.87
192 193 0.179034 ATGCCCAAGATCGCTCTTCC 60.179 55.000 0.00 0.00 39.78 3.46
193 194 1.884926 GCCCAAGATCGCTCTTCCG 60.885 63.158 0.00 0.00 39.78 4.30
194 195 1.816537 CCCAAGATCGCTCTTCCGA 59.183 57.895 0.00 0.00 39.78 4.55
195 196 0.175760 CCCAAGATCGCTCTTCCGAA 59.824 55.000 0.00 0.00 39.78 4.30
196 197 1.405526 CCCAAGATCGCTCTTCCGAAA 60.406 52.381 0.00 0.00 39.78 3.46
197 198 1.661112 CCAAGATCGCTCTTCCGAAAC 59.339 52.381 0.00 0.00 39.78 2.78
198 199 2.337583 CAAGATCGCTCTTCCGAAACA 58.662 47.619 0.00 0.00 39.78 2.83
199 200 1.997669 AGATCGCTCTTCCGAAACAC 58.002 50.000 0.00 0.00 41.01 3.32
200 201 1.000145 GATCGCTCTTCCGAAACACC 59.000 55.000 0.00 0.00 41.01 4.16
201 202 0.320374 ATCGCTCTTCCGAAACACCA 59.680 50.000 0.00 0.00 41.01 4.17
202 203 0.599204 TCGCTCTTCCGAAACACCAC 60.599 55.000 0.00 0.00 33.77 4.16
203 204 0.878523 CGCTCTTCCGAAACACCACA 60.879 55.000 0.00 0.00 0.00 4.17
204 205 1.523758 GCTCTTCCGAAACACCACAT 58.476 50.000 0.00 0.00 0.00 3.21
205 206 1.880027 GCTCTTCCGAAACACCACATT 59.120 47.619 0.00 0.00 0.00 2.71
206 207 2.293399 GCTCTTCCGAAACACCACATTT 59.707 45.455 0.00 0.00 0.00 2.32
207 208 3.243401 GCTCTTCCGAAACACCACATTTT 60.243 43.478 0.00 0.00 0.00 1.82
208 209 4.537015 CTCTTCCGAAACACCACATTTTC 58.463 43.478 0.00 0.00 0.00 2.29
209 210 3.948473 TCTTCCGAAACACCACATTTTCA 59.052 39.130 0.00 0.00 32.21 2.69
210 211 4.582656 TCTTCCGAAACACCACATTTTCAT 59.417 37.500 0.00 0.00 32.21 2.57
211 212 4.927978 TCCGAAACACCACATTTTCATT 57.072 36.364 0.00 0.00 32.21 2.57
212 213 5.269505 TCCGAAACACCACATTTTCATTT 57.730 34.783 0.00 0.00 32.21 2.32
213 214 6.392625 TCCGAAACACCACATTTTCATTTA 57.607 33.333 0.00 0.00 32.21 1.40
214 215 6.987386 TCCGAAACACCACATTTTCATTTAT 58.013 32.000 0.00 0.00 32.21 1.40
215 216 6.865726 TCCGAAACACCACATTTTCATTTATG 59.134 34.615 0.00 0.00 32.21 1.90
216 217 6.865726 CCGAAACACCACATTTTCATTTATGA 59.134 34.615 0.00 0.00 32.21 2.15
217 218 7.383572 CCGAAACACCACATTTTCATTTATGAA 59.616 33.333 1.12 1.12 44.42 2.57
218 219 8.427012 CGAAACACCACATTTTCATTTATGAAG 58.573 33.333 5.41 0.00 46.34 3.02
219 220 7.656707 AACACCACATTTTCATTTATGAAGC 57.343 32.000 5.41 0.00 46.34 3.86
220 221 5.863397 ACACCACATTTTCATTTATGAAGCG 59.137 36.000 5.41 2.10 46.34 4.68
221 222 4.864247 ACCACATTTTCATTTATGAAGCGC 59.136 37.500 0.00 0.00 46.34 5.92
222 223 5.104374 CCACATTTTCATTTATGAAGCGCT 58.896 37.500 2.64 2.64 46.34 5.92
223 224 5.577945 CCACATTTTCATTTATGAAGCGCTT 59.422 36.000 25.35 25.35 46.34 4.68
224 225 6.237648 CCACATTTTCATTTATGAAGCGCTTC 60.238 38.462 37.21 37.21 46.34 3.86
225 226 5.512788 ACATTTTCATTTATGAAGCGCTTCG 59.487 36.000 37.03 24.83 46.34 3.79
226 227 4.678509 TTTCATTTATGAAGCGCTTCGT 57.321 36.364 38.47 38.47 46.34 3.85
227 228 4.678509 TTCATTTATGAAGCGCTTCGTT 57.321 36.364 40.73 31.66 41.51 3.85
228 229 4.678509 TCATTTATGAAGCGCTTCGTTT 57.321 36.364 40.73 29.51 42.28 3.60
229 230 4.647964 TCATTTATGAAGCGCTTCGTTTC 58.352 39.130 40.73 22.58 44.81 2.78
230 231 4.391830 TCATTTATGAAGCGCTTCGTTTCT 59.608 37.500 40.73 25.45 44.83 2.52
231 232 3.722555 TTATGAAGCGCTTCGTTTCTG 57.277 42.857 40.73 0.00 44.83 3.02
232 233 1.795768 ATGAAGCGCTTCGTTTCTGA 58.204 45.000 37.03 22.74 44.83 3.27
233 234 1.795768 TGAAGCGCTTCGTTTCTGAT 58.204 45.000 37.03 8.19 44.83 2.90
234 235 2.954316 TGAAGCGCTTCGTTTCTGATA 58.046 42.857 37.03 19.04 44.83 2.15
235 236 2.923655 TGAAGCGCTTCGTTTCTGATAG 59.076 45.455 37.03 0.00 44.83 2.08
236 237 1.281899 AGCGCTTCGTTTCTGATAGC 58.718 50.000 2.64 0.00 0.00 2.97
238 239 1.269166 CGCTTCGTTTCTGATAGCGT 58.731 50.000 0.00 0.00 46.82 5.07
239 240 1.654105 CGCTTCGTTTCTGATAGCGTT 59.346 47.619 0.00 0.00 46.82 4.84
240 241 2.284514 CGCTTCGTTTCTGATAGCGTTC 60.285 50.000 0.00 0.00 46.82 3.95
241 242 2.029365 GCTTCGTTTCTGATAGCGTTCC 59.971 50.000 0.00 0.00 0.00 3.62
242 243 2.288961 TCGTTTCTGATAGCGTTCCC 57.711 50.000 0.00 0.00 0.00 3.97
243 244 1.546923 TCGTTTCTGATAGCGTTCCCA 59.453 47.619 0.00 0.00 0.00 4.37
244 245 2.028839 TCGTTTCTGATAGCGTTCCCAA 60.029 45.455 0.00 0.00 0.00 4.12
245 246 2.739913 CGTTTCTGATAGCGTTCCCAAA 59.260 45.455 0.00 0.00 0.00 3.28
246 247 3.187637 CGTTTCTGATAGCGTTCCCAAAA 59.812 43.478 0.00 0.00 0.00 2.44
247 248 4.319911 CGTTTCTGATAGCGTTCCCAAAAA 60.320 41.667 0.00 0.00 0.00 1.94
265 266 3.698029 AAAATACAGATCCATGCACGC 57.302 42.857 0.00 0.00 0.00 5.34
266 267 1.597742 AATACAGATCCATGCACGCC 58.402 50.000 0.00 0.00 0.00 5.68
267 268 0.761187 ATACAGATCCATGCACGCCT 59.239 50.000 0.00 0.00 0.00 5.52
268 269 0.104855 TACAGATCCATGCACGCCTC 59.895 55.000 0.00 0.00 0.00 4.70
269 270 1.153309 CAGATCCATGCACGCCTCA 60.153 57.895 0.00 0.00 0.00 3.86
270 271 0.534427 CAGATCCATGCACGCCTCAT 60.534 55.000 0.00 0.00 0.00 2.90
271 272 0.534427 AGATCCATGCACGCCTCATG 60.534 55.000 0.00 5.47 40.60 3.07
272 273 0.816825 GATCCATGCACGCCTCATGT 60.817 55.000 0.00 0.00 39.60 3.21
273 274 0.816825 ATCCATGCACGCCTCATGTC 60.817 55.000 0.00 0.00 39.60 3.06
274 275 1.450848 CCATGCACGCCTCATGTCT 60.451 57.895 0.00 0.00 39.60 3.41
275 276 1.712018 CCATGCACGCCTCATGTCTG 61.712 60.000 0.00 0.00 39.60 3.51
276 277 0.741927 CATGCACGCCTCATGTCTGA 60.742 55.000 0.00 0.00 37.22 3.27
277 278 0.036105 ATGCACGCCTCATGTCTGAA 60.036 50.000 0.00 0.00 0.00 3.02
278 279 0.250252 TGCACGCCTCATGTCTGAAA 60.250 50.000 0.00 0.00 0.00 2.69
279 280 0.874390 GCACGCCTCATGTCTGAAAA 59.126 50.000 0.00 0.00 0.00 2.29
280 281 1.470098 GCACGCCTCATGTCTGAAAAT 59.530 47.619 0.00 0.00 0.00 1.82
281 282 2.095059 GCACGCCTCATGTCTGAAAATT 60.095 45.455 0.00 0.00 0.00 1.82
282 283 3.612479 GCACGCCTCATGTCTGAAAATTT 60.612 43.478 0.00 0.00 0.00 1.82
283 284 3.916172 CACGCCTCATGTCTGAAAATTTG 59.084 43.478 0.00 0.00 0.00 2.32
284 285 3.057315 ACGCCTCATGTCTGAAAATTTGG 60.057 43.478 0.00 0.00 0.00 3.28
285 286 3.191162 CGCCTCATGTCTGAAAATTTGGA 59.809 43.478 0.00 0.00 0.00 3.53
286 287 4.321156 CGCCTCATGTCTGAAAATTTGGAA 60.321 41.667 0.00 0.00 0.00 3.53
287 288 5.166398 GCCTCATGTCTGAAAATTTGGAAG 58.834 41.667 0.00 0.00 0.00 3.46
288 289 5.717119 CCTCATGTCTGAAAATTTGGAAGG 58.283 41.667 0.00 0.00 0.00 3.46
289 290 5.337009 CCTCATGTCTGAAAATTTGGAAGGG 60.337 44.000 0.00 0.00 0.00 3.95
290 291 4.021192 TCATGTCTGAAAATTTGGAAGGGC 60.021 41.667 0.00 0.00 0.00 5.19
291 292 3.303938 TGTCTGAAAATTTGGAAGGGCA 58.696 40.909 0.00 0.00 0.00 5.36
292 293 3.069443 TGTCTGAAAATTTGGAAGGGCAC 59.931 43.478 0.00 0.00 0.00 5.01
316 317 2.910994 GCAGGGGCATGCATCTCC 60.911 66.667 21.36 14.47 45.77 3.71
317 318 2.203451 CAGGGGCATGCATCTCCC 60.203 66.667 21.36 20.07 39.67 4.30
320 321 4.962836 GGGCATGCATCTCCCCGG 62.963 72.222 21.36 0.00 33.91 5.73
321 322 3.877450 GGCATGCATCTCCCCGGA 61.877 66.667 21.36 0.00 0.00 5.14
322 323 2.433446 GCATGCATCTCCCCGGAT 59.567 61.111 14.21 0.00 0.00 4.18
323 324 1.673665 GCATGCATCTCCCCGGATC 60.674 63.158 14.21 0.00 0.00 3.36
324 325 1.756665 CATGCATCTCCCCGGATCA 59.243 57.895 0.73 0.00 0.00 2.92
325 326 0.109153 CATGCATCTCCCCGGATCAA 59.891 55.000 0.73 0.00 0.00 2.57
326 327 0.846015 ATGCATCTCCCCGGATCAAA 59.154 50.000 0.73 0.00 0.00 2.69
327 328 0.846015 TGCATCTCCCCGGATCAAAT 59.154 50.000 0.73 0.00 0.00 2.32
328 329 1.242076 GCATCTCCCCGGATCAAATG 58.758 55.000 0.73 0.94 0.00 2.32
329 330 1.202806 GCATCTCCCCGGATCAAATGA 60.203 52.381 0.73 0.00 0.00 2.57
330 331 2.553904 GCATCTCCCCGGATCAAATGAT 60.554 50.000 0.73 0.00 37.51 2.45
331 332 2.936919 TCTCCCCGGATCAAATGATG 57.063 50.000 0.73 0.00 34.37 3.07
332 333 1.202806 TCTCCCCGGATCAAATGATGC 60.203 52.381 0.73 2.59 39.18 3.91
333 334 0.846015 TCCCCGGATCAAATGATGCT 59.154 50.000 0.73 0.00 40.22 3.79
334 335 1.215173 TCCCCGGATCAAATGATGCTT 59.785 47.619 0.73 0.00 40.22 3.91
335 336 1.610522 CCCCGGATCAAATGATGCTTC 59.389 52.381 0.73 0.00 40.22 3.86
336 337 1.265095 CCCGGATCAAATGATGCTTCG 59.735 52.381 0.73 5.94 40.22 3.79
337 338 1.942657 CCGGATCAAATGATGCTTCGT 59.057 47.619 12.21 0.00 40.22 3.85
338 339 2.286595 CCGGATCAAATGATGCTTCGTG 60.287 50.000 12.21 0.00 40.22 4.35
339 340 2.609002 CGGATCAAATGATGCTTCGTGA 59.391 45.455 12.21 0.00 40.22 4.35
340 341 3.249320 CGGATCAAATGATGCTTCGTGAT 59.751 43.478 12.21 10.93 40.22 3.06
341 342 4.610007 CGGATCAAATGATGCTTCGTGATC 60.610 45.833 20.83 20.83 40.22 2.92
342 343 4.514441 GGATCAAATGATGCTTCGTGATCT 59.486 41.667 24.31 6.93 39.42 2.75
343 344 5.698089 GGATCAAATGATGCTTCGTGATCTA 59.302 40.000 24.31 0.46 39.42 1.98
344 345 6.370994 GGATCAAATGATGCTTCGTGATCTAT 59.629 38.462 24.31 7.41 39.42 1.98
345 346 7.547019 GGATCAAATGATGCTTCGTGATCTATA 59.453 37.037 24.31 0.00 39.42 1.31
346 347 8.837788 ATCAAATGATGCTTCGTGATCTATAA 57.162 30.769 0.00 0.00 32.68 0.98
347 348 8.661352 TCAAATGATGCTTCGTGATCTATAAA 57.339 30.769 0.00 0.00 0.00 1.40
348 349 8.551205 TCAAATGATGCTTCGTGATCTATAAAC 58.449 33.333 0.00 0.00 0.00 2.01
349 350 8.554528 CAAATGATGCTTCGTGATCTATAAACT 58.445 33.333 0.00 0.00 0.00 2.66
350 351 7.881643 ATGATGCTTCGTGATCTATAAACTC 57.118 36.000 0.00 0.00 0.00 3.01
351 352 6.805713 TGATGCTTCGTGATCTATAAACTCA 58.194 36.000 0.00 0.00 0.00 3.41
352 353 7.436933 TGATGCTTCGTGATCTATAAACTCAT 58.563 34.615 0.00 0.00 0.00 2.90
353 354 7.928167 TGATGCTTCGTGATCTATAAACTCATT 59.072 33.333 0.00 0.00 0.00 2.57
354 355 8.668510 ATGCTTCGTGATCTATAAACTCATTT 57.331 30.769 0.00 0.00 0.00 2.32
355 356 7.909267 TGCTTCGTGATCTATAAACTCATTTG 58.091 34.615 0.00 0.00 0.00 2.32
356 357 7.763985 TGCTTCGTGATCTATAAACTCATTTGA 59.236 33.333 0.00 0.00 0.00 2.69
357 358 8.604035 GCTTCGTGATCTATAAACTCATTTGAA 58.396 33.333 0.00 0.00 0.00 2.69
360 361 9.430623 TCGTGATCTATAAACTCATTTGAAACA 57.569 29.630 0.00 0.00 0.00 2.83
376 377 9.880064 CATTTGAAACATAAAATTGTCAATGCA 57.120 25.926 0.00 0.00 0.00 3.96
378 379 9.880064 TTTGAAACATAAAATTGTCAATGCATG 57.120 25.926 0.00 5.92 0.00 4.06
379 380 8.604640 TGAAACATAAAATTGTCAATGCATGT 57.395 26.923 0.00 6.49 0.00 3.21
380 381 9.702494 TGAAACATAAAATTGTCAATGCATGTA 57.298 25.926 0.00 0.00 0.00 2.29
383 384 9.656040 AACATAAAATTGTCAATGCATGTATGT 57.344 25.926 0.00 10.81 31.57 2.29
384 385 9.656040 ACATAAAATTGTCAATGCATGTATGTT 57.344 25.926 0.00 0.00 0.00 2.71
387 388 7.966246 AAATTGTCAATGCATGTATGTTTGT 57.034 28.000 0.00 0.00 0.00 2.83
388 389 9.486497 AAAATTGTCAATGCATGTATGTTTGTA 57.514 25.926 0.00 0.00 0.00 2.41
389 390 9.656040 AAATTGTCAATGCATGTATGTTTGTAT 57.344 25.926 0.00 0.00 0.00 2.29
390 391 9.656040 AATTGTCAATGCATGTATGTTTGTATT 57.344 25.926 0.00 0.00 0.00 1.89
391 392 8.686397 TTGTCAATGCATGTATGTTTGTATTC 57.314 30.769 0.00 0.00 0.00 1.75
392 393 7.824672 TGTCAATGCATGTATGTTTGTATTCA 58.175 30.769 0.00 0.00 0.00 2.57
393 394 8.302438 TGTCAATGCATGTATGTTTGTATTCAA 58.698 29.630 0.00 0.00 0.00 2.69
394 395 8.800972 GTCAATGCATGTATGTTTGTATTCAAG 58.199 33.333 0.00 0.00 34.88 3.02
395 396 8.522003 TCAATGCATGTATGTTTGTATTCAAGT 58.478 29.630 0.00 0.00 34.88 3.16
396 397 9.786105 CAATGCATGTATGTTTGTATTCAAGTA 57.214 29.630 0.00 0.00 34.88 2.24
398 399 9.787532 ATGCATGTATGTTTGTATTCAAGTAAC 57.212 29.630 0.00 0.00 34.88 2.50
399 400 8.240682 TGCATGTATGTTTGTATTCAAGTAACC 58.759 33.333 0.00 0.00 34.88 2.85
400 401 8.458843 GCATGTATGTTTGTATTCAAGTAACCT 58.541 33.333 0.00 0.00 34.88 3.50
465 466 8.621532 TTTTGTTAAGCTGATGAGTAATCTGT 57.378 30.769 0.00 0.00 36.77 3.41
466 467 8.621532 TTTGTTAAGCTGATGAGTAATCTGTT 57.378 30.769 0.00 0.00 36.77 3.16
467 468 8.621532 TTGTTAAGCTGATGAGTAATCTGTTT 57.378 30.769 0.00 2.67 39.70 2.83
468 469 8.256611 TGTTAAGCTGATGAGTAATCTGTTTC 57.743 34.615 0.49 0.00 38.22 2.78
469 470 7.877612 TGTTAAGCTGATGAGTAATCTGTTTCA 59.122 33.333 0.49 0.00 38.22 2.69
470 471 6.981762 AAGCTGATGAGTAATCTGTTTCAG 57.018 37.500 0.00 1.01 34.13 3.02
471 472 6.047511 AGCTGATGAGTAATCTGTTTCAGT 57.952 37.500 11.61 1.77 36.77 3.41
472 473 7.175347 AGCTGATGAGTAATCTGTTTCAGTA 57.825 36.000 11.61 0.00 36.77 2.74
473 474 7.038659 AGCTGATGAGTAATCTGTTTCAGTAC 58.961 38.462 11.61 0.00 36.77 2.73
474 475 7.038659 GCTGATGAGTAATCTGTTTCAGTACT 58.961 38.462 11.61 0.00 36.77 2.73
475 476 7.547370 GCTGATGAGTAATCTGTTTCAGTACTT 59.453 37.037 0.00 0.00 36.77 2.24
476 477 9.429359 CTGATGAGTAATCTGTTTCAGTACTTT 57.571 33.333 0.00 0.00 36.15 2.66
477 478 9.778741 TGATGAGTAATCTGTTTCAGTACTTTT 57.221 29.630 0.00 0.00 36.15 2.27
479 480 8.378172 TGAGTAATCTGTTTCAGTACTTTTGG 57.622 34.615 0.00 0.00 28.11 3.28
480 481 7.990886 TGAGTAATCTGTTTCAGTACTTTTGGT 59.009 33.333 0.00 0.00 28.11 3.67
481 482 8.747538 AGTAATCTGTTTCAGTACTTTTGGTT 57.252 30.769 0.00 0.00 32.61 3.67
482 483 9.185680 AGTAATCTGTTTCAGTACTTTTGGTTT 57.814 29.630 0.00 0.00 32.61 3.27
483 484 9.797556 GTAATCTGTTTCAGTACTTTTGGTTTT 57.202 29.630 0.00 0.00 32.61 2.43
484 485 8.702163 AATCTGTTTCAGTACTTTTGGTTTTG 57.298 30.769 0.00 0.00 32.61 2.44
485 486 6.626302 TCTGTTTCAGTACTTTTGGTTTTGG 58.374 36.000 0.00 0.00 32.61 3.28
486 487 5.725362 TGTTTCAGTACTTTTGGTTTTGGG 58.275 37.500 0.00 0.00 0.00 4.12
487 488 5.246429 TGTTTCAGTACTTTTGGTTTTGGGT 59.754 36.000 0.00 0.00 0.00 4.51
488 489 5.585820 TTCAGTACTTTTGGTTTTGGGTC 57.414 39.130 0.00 0.00 0.00 4.46
489 490 3.955551 TCAGTACTTTTGGTTTTGGGTCC 59.044 43.478 0.00 0.00 0.00 4.46
490 491 2.953648 AGTACTTTTGGTTTTGGGTCCG 59.046 45.455 0.00 0.00 0.00 4.79
491 492 1.855295 ACTTTTGGTTTTGGGTCCGT 58.145 45.000 0.00 0.00 0.00 4.69
492 493 2.181125 ACTTTTGGTTTTGGGTCCGTT 58.819 42.857 0.00 0.00 0.00 4.44
493 494 2.568062 ACTTTTGGTTTTGGGTCCGTTT 59.432 40.909 0.00 0.00 0.00 3.60
494 495 3.768215 ACTTTTGGTTTTGGGTCCGTTTA 59.232 39.130 0.00 0.00 0.00 2.01
495 496 4.406326 ACTTTTGGTTTTGGGTCCGTTTAT 59.594 37.500 0.00 0.00 0.00 1.40
496 497 4.323553 TTTGGTTTTGGGTCCGTTTATG 57.676 40.909 0.00 0.00 0.00 1.90
497 498 2.946785 TGGTTTTGGGTCCGTTTATGT 58.053 42.857 0.00 0.00 0.00 2.29
498 499 2.885894 TGGTTTTGGGTCCGTTTATGTC 59.114 45.455 0.00 0.00 0.00 3.06
499 500 2.885894 GGTTTTGGGTCCGTTTATGTCA 59.114 45.455 0.00 0.00 0.00 3.58
500 501 3.304861 GGTTTTGGGTCCGTTTATGTCAC 60.305 47.826 0.00 0.00 0.00 3.67
501 502 2.932855 TTGGGTCCGTTTATGTCACA 57.067 45.000 0.00 0.00 0.00 3.58
502 503 3.426787 TTGGGTCCGTTTATGTCACAT 57.573 42.857 0.00 0.00 0.00 3.21
503 504 2.980568 TGGGTCCGTTTATGTCACATC 58.019 47.619 0.00 0.00 0.00 3.06
504 505 2.569853 TGGGTCCGTTTATGTCACATCT 59.430 45.455 0.00 0.00 0.00 2.90
505 506 3.770388 TGGGTCCGTTTATGTCACATCTA 59.230 43.478 0.00 0.00 0.00 1.98
506 507 4.223255 TGGGTCCGTTTATGTCACATCTAA 59.777 41.667 0.00 0.00 0.00 2.10
507 508 5.104693 TGGGTCCGTTTATGTCACATCTAAT 60.105 40.000 0.00 0.00 0.00 1.73
508 509 5.465724 GGGTCCGTTTATGTCACATCTAATC 59.534 44.000 0.00 0.00 0.00 1.75
509 510 6.281405 GGTCCGTTTATGTCACATCTAATCT 58.719 40.000 0.00 0.00 0.00 2.40
510 511 7.431249 GGTCCGTTTATGTCACATCTAATCTA 58.569 38.462 0.00 0.00 0.00 1.98
511 512 7.381678 GGTCCGTTTATGTCACATCTAATCTAC 59.618 40.741 0.00 0.00 0.00 2.59
512 513 8.136165 GTCCGTTTATGTCACATCTAATCTACT 58.864 37.037 0.00 0.00 0.00 2.57
513 514 9.346005 TCCGTTTATGTCACATCTAATCTACTA 57.654 33.333 0.00 0.00 0.00 1.82
514 515 9.395707 CCGTTTATGTCACATCTAATCTACTAC 57.604 37.037 0.00 0.00 0.00 2.73
533 534 6.487299 ACTACCCCTATAAAAGCAAGAGAG 57.513 41.667 0.00 0.00 0.00 3.20
555 556 1.964223 GCGGAGAACCAGATCATCCTA 59.036 52.381 0.00 0.00 35.59 2.94
557 558 3.367910 GCGGAGAACCAGATCATCCTATC 60.368 52.174 0.00 0.00 35.59 2.08
580 581 4.430007 CATCAAAACCTGCAATCTGATGG 58.570 43.478 12.62 0.00 37.55 3.51
606 607 3.181465 ACATCCCTCCAGCATACTAAACG 60.181 47.826 0.00 0.00 0.00 3.60
607 608 1.138266 TCCCTCCAGCATACTAAACGC 59.862 52.381 0.00 0.00 0.00 4.84
615 616 6.041511 TCCAGCATACTAAACGCGTTTTATA 58.958 36.000 38.53 29.18 34.23 0.98
616 617 6.702723 TCCAGCATACTAAACGCGTTTTATAT 59.297 34.615 38.53 29.89 34.23 0.86
634 635 9.908152 GTTTTATATCTTAATTACCCACCATGC 57.092 33.333 0.00 0.00 0.00 4.06
654 655 6.365789 CCATGCCATTGCCTTAATTAATTACG 59.634 38.462 7.43 6.11 36.33 3.18
693 694 6.073314 GGTAACATCTACTACCCCTGTATCA 58.927 44.000 0.00 0.00 32.83 2.15
694 695 6.208994 GGTAACATCTACTACCCCTGTATCAG 59.791 46.154 0.00 0.00 32.83 2.90
726 727 2.040009 GCTAATCCTACCCGCTGCCA 62.040 60.000 0.00 0.00 0.00 4.92
728 729 0.978667 TAATCCTACCCGCTGCCACA 60.979 55.000 0.00 0.00 0.00 4.17
778 801 4.866224 CACCACACCCGCACCACA 62.866 66.667 0.00 0.00 0.00 4.17
794 817 4.473520 CAACCTCGCCCGCTCCAT 62.474 66.667 0.00 0.00 0.00 3.41
806 829 2.515071 GCTCCATCTCCCAGCGGAT 61.515 63.158 0.00 0.00 37.60 4.18
996 1019 2.842936 CGGAGGCGGGGGAGTAAT 60.843 66.667 0.00 0.00 0.00 1.89
1069 1093 0.245539 CGGGTTCTGCTTCCTTACGA 59.754 55.000 0.00 0.00 0.00 3.43
1286 1739 1.303948 CCACACTCCCCATGATGCA 59.696 57.895 0.00 0.00 0.00 3.96
1335 1788 3.726517 CTTGGAACCGCCGCAGTG 61.727 66.667 0.00 0.00 40.66 3.66
2133 2795 2.372264 TGCCTTTGCTCTTGGATCATC 58.628 47.619 0.00 0.00 38.71 2.92
2147 2809 8.162878 TCTTGGATCATCATTCAAGCTTATTC 57.837 34.615 0.00 0.00 43.28 1.75
2420 3085 6.917477 TGAAATATTTCCAATTATCACGCTGC 59.083 34.615 22.42 0.00 36.36 5.25
2789 3468 8.458843 ACTAAAATGTCATTAAGCACCATGTAC 58.541 33.333 0.00 0.00 0.00 2.90
2864 3543 9.515226 TTTGAACTATTTAGCTACAGGACAATT 57.485 29.630 0.00 0.00 0.00 2.32
2964 3643 5.147330 TCTCGGAACATAAAAAGCAGAGA 57.853 39.130 0.00 0.00 0.00 3.10
3061 3743 5.435686 TTCAGGATAGAAAGGCAGCTTTA 57.564 39.130 0.00 0.00 0.00 1.85
3090 3772 4.127171 GGTCGCAAAGATCAAGGCTATTA 58.873 43.478 0.00 0.00 0.00 0.98
3102 3784 9.368416 AGATCAAGGCTATTATGTCAAGTACTA 57.632 33.333 0.00 0.00 0.00 1.82
3154 3837 1.983224 CCCCAGTTCATCACCGACT 59.017 57.895 0.00 0.00 0.00 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.430332 CTGTTTTTGTCCAGGGCAAAGA 59.570 45.455 18.67 12.39 37.18 2.52
1 2 2.168313 ACTGTTTTTGTCCAGGGCAAAG 59.832 45.455 18.67 10.20 37.18 2.77
2 3 2.167487 GACTGTTTTTGTCCAGGGCAAA 59.833 45.455 15.68 15.68 34.47 3.68
4 5 1.398692 GACTGTTTTTGTCCAGGGCA 58.601 50.000 0.00 0.00 32.90 5.36
11 12 6.370166 TGTTTGAAATTGGGACTGTTTTTGTC 59.630 34.615 0.00 0.00 0.00 3.18
12 13 6.234177 TGTTTGAAATTGGGACTGTTTTTGT 58.766 32.000 0.00 0.00 0.00 2.83
13 14 6.734104 TGTTTGAAATTGGGACTGTTTTTG 57.266 33.333 0.00 0.00 0.00 2.44
14 15 7.446931 AGTTTGTTTGAAATTGGGACTGTTTTT 59.553 29.630 0.00 0.00 0.00 1.94
15 16 6.939730 AGTTTGTTTGAAATTGGGACTGTTTT 59.060 30.769 0.00 0.00 0.00 2.43
16 17 6.472016 AGTTTGTTTGAAATTGGGACTGTTT 58.528 32.000 0.00 0.00 0.00 2.83
17 18 6.048732 AGTTTGTTTGAAATTGGGACTGTT 57.951 33.333 0.00 0.00 0.00 3.16
18 19 5.675684 AGTTTGTTTGAAATTGGGACTGT 57.324 34.783 0.00 0.00 0.00 3.55
19 20 7.307337 GCATTAGTTTGTTTGAAATTGGGACTG 60.307 37.037 0.00 0.00 0.00 3.51
20 21 6.705825 GCATTAGTTTGTTTGAAATTGGGACT 59.294 34.615 0.00 0.00 0.00 3.85
21 22 6.705825 AGCATTAGTTTGTTTGAAATTGGGAC 59.294 34.615 0.00 0.00 0.00 4.46
22 23 6.825610 AGCATTAGTTTGTTTGAAATTGGGA 58.174 32.000 0.00 0.00 0.00 4.37
23 24 7.117667 GGTAGCATTAGTTTGTTTGAAATTGGG 59.882 37.037 0.00 0.00 0.00 4.12
24 25 7.148820 CGGTAGCATTAGTTTGTTTGAAATTGG 60.149 37.037 0.00 0.00 0.00 3.16
25 26 7.381139 ACGGTAGCATTAGTTTGTTTGAAATTG 59.619 33.333 0.00 0.00 0.00 2.32
26 27 7.381139 CACGGTAGCATTAGTTTGTTTGAAATT 59.619 33.333 0.00 0.00 0.00 1.82
27 28 6.861055 CACGGTAGCATTAGTTTGTTTGAAAT 59.139 34.615 0.00 0.00 0.00 2.17
28 29 6.183360 ACACGGTAGCATTAGTTTGTTTGAAA 60.183 34.615 0.00 0.00 0.00 2.69
29 30 5.297278 ACACGGTAGCATTAGTTTGTTTGAA 59.703 36.000 0.00 0.00 0.00 2.69
30 31 4.817464 ACACGGTAGCATTAGTTTGTTTGA 59.183 37.500 0.00 0.00 0.00 2.69
31 32 5.103290 ACACGGTAGCATTAGTTTGTTTG 57.897 39.130 0.00 0.00 0.00 2.93
32 33 5.297278 TGAACACGGTAGCATTAGTTTGTTT 59.703 36.000 0.00 0.00 0.00 2.83
33 34 4.817464 TGAACACGGTAGCATTAGTTTGTT 59.183 37.500 0.00 0.00 0.00 2.83
34 35 4.382291 TGAACACGGTAGCATTAGTTTGT 58.618 39.130 0.00 0.00 0.00 2.83
35 36 5.351233 TTGAACACGGTAGCATTAGTTTG 57.649 39.130 0.00 0.00 0.00 2.93
36 37 5.703592 TCATTGAACACGGTAGCATTAGTTT 59.296 36.000 0.00 0.00 0.00 2.66
37 38 5.242434 TCATTGAACACGGTAGCATTAGTT 58.758 37.500 0.00 0.00 0.00 2.24
38 39 4.827692 TCATTGAACACGGTAGCATTAGT 58.172 39.130 0.00 0.00 0.00 2.24
39 40 5.991328 ATCATTGAACACGGTAGCATTAG 57.009 39.130 0.00 0.00 0.00 1.73
40 41 5.645929 ACAATCATTGAACACGGTAGCATTA 59.354 36.000 3.79 0.00 0.00 1.90
41 42 4.458989 ACAATCATTGAACACGGTAGCATT 59.541 37.500 3.79 0.00 0.00 3.56
42 43 4.009675 ACAATCATTGAACACGGTAGCAT 58.990 39.130 3.79 0.00 0.00 3.79
43 44 3.407698 ACAATCATTGAACACGGTAGCA 58.592 40.909 3.79 0.00 0.00 3.49
44 45 5.556382 CGATACAATCATTGAACACGGTAGC 60.556 44.000 3.79 0.00 0.00 3.58
45 46 5.746721 TCGATACAATCATTGAACACGGTAG 59.253 40.000 3.79 0.00 0.00 3.18
46 47 5.517411 GTCGATACAATCATTGAACACGGTA 59.483 40.000 3.79 0.00 0.00 4.02
47 48 4.328983 GTCGATACAATCATTGAACACGGT 59.671 41.667 3.79 0.00 0.00 4.83
48 49 4.328712 TGTCGATACAATCATTGAACACGG 59.671 41.667 3.79 0.00 30.91 4.94
49 50 5.448926 TGTCGATACAATCATTGAACACG 57.551 39.130 3.79 4.76 30.91 4.49
68 69 2.315925 TTGATCAGGCCGAGATTGTC 57.684 50.000 13.89 4.70 0.00 3.18
69 70 2.787473 TTTGATCAGGCCGAGATTGT 57.213 45.000 13.89 0.00 0.00 2.71
70 71 3.303593 CGATTTTGATCAGGCCGAGATTG 60.304 47.826 13.89 0.00 0.00 2.67
71 72 2.874701 CGATTTTGATCAGGCCGAGATT 59.125 45.455 13.89 0.00 0.00 2.40
72 73 2.487934 CGATTTTGATCAGGCCGAGAT 58.512 47.619 12.77 12.77 0.00 2.75
73 74 1.939974 CGATTTTGATCAGGCCGAGA 58.060 50.000 0.00 0.00 0.00 4.04
74 75 0.305922 GCGATTTTGATCAGGCCGAG 59.694 55.000 0.00 0.00 0.00 4.63
75 76 0.392327 TGCGATTTTGATCAGGCCGA 60.392 50.000 0.00 0.00 0.00 5.54
76 77 0.248215 GTGCGATTTTGATCAGGCCG 60.248 55.000 0.00 0.19 0.00 6.13
77 78 1.064654 GAGTGCGATTTTGATCAGGCC 59.935 52.381 0.00 0.00 0.00 5.19
78 79 1.064654 GGAGTGCGATTTTGATCAGGC 59.935 52.381 0.00 0.00 0.00 4.85
79 80 2.636830 AGGAGTGCGATTTTGATCAGG 58.363 47.619 0.00 0.00 0.00 3.86
80 81 3.686241 TCAAGGAGTGCGATTTTGATCAG 59.314 43.478 0.00 0.00 0.00 2.90
81 82 3.436704 GTCAAGGAGTGCGATTTTGATCA 59.563 43.478 0.00 0.00 31.28 2.92
82 83 3.686726 AGTCAAGGAGTGCGATTTTGATC 59.313 43.478 0.00 0.00 31.28 2.92
83 84 3.679389 AGTCAAGGAGTGCGATTTTGAT 58.321 40.909 0.00 0.00 31.28 2.57
84 85 3.126001 AGTCAAGGAGTGCGATTTTGA 57.874 42.857 0.00 0.00 0.00 2.69
85 86 3.997021 AGTAGTCAAGGAGTGCGATTTTG 59.003 43.478 0.00 0.00 0.00 2.44
86 87 3.997021 CAGTAGTCAAGGAGTGCGATTTT 59.003 43.478 0.00 0.00 0.00 1.82
87 88 3.589988 CAGTAGTCAAGGAGTGCGATTT 58.410 45.455 0.00 0.00 0.00 2.17
88 89 2.093973 CCAGTAGTCAAGGAGTGCGATT 60.094 50.000 0.00 0.00 0.00 3.34
89 90 1.478510 CCAGTAGTCAAGGAGTGCGAT 59.521 52.381 0.00 0.00 0.00 4.58
90 91 0.888619 CCAGTAGTCAAGGAGTGCGA 59.111 55.000 0.00 0.00 0.00 5.10
91 92 0.603569 ACCAGTAGTCAAGGAGTGCG 59.396 55.000 0.00 0.00 0.00 5.34
92 93 2.841442 AACCAGTAGTCAAGGAGTGC 57.159 50.000 0.00 0.00 0.00 4.40
93 94 6.464222 TCAAATAACCAGTAGTCAAGGAGTG 58.536 40.000 0.00 0.00 0.00 3.51
94 95 6.681729 TCAAATAACCAGTAGTCAAGGAGT 57.318 37.500 0.00 0.00 0.00 3.85
104 105 9.970395 CACGGTTACTATATCAAATAACCAGTA 57.030 33.333 11.46 0.00 44.57 2.74
105 106 8.698210 TCACGGTTACTATATCAAATAACCAGT 58.302 33.333 11.46 7.78 44.57 4.00
106 107 8.975439 GTCACGGTTACTATATCAAATAACCAG 58.025 37.037 11.46 7.30 44.57 4.00
107 108 7.927629 GGTCACGGTTACTATATCAAATAACCA 59.072 37.037 11.46 0.00 44.57 3.67
108 109 7.927629 TGGTCACGGTTACTATATCAAATAACC 59.072 37.037 0.00 0.00 42.08 2.85
109 110 8.876275 TGGTCACGGTTACTATATCAAATAAC 57.124 34.615 0.00 0.00 0.00 1.89
110 111 9.483916 CATGGTCACGGTTACTATATCAAATAA 57.516 33.333 0.00 0.00 0.00 1.40
111 112 7.601130 GCATGGTCACGGTTACTATATCAAATA 59.399 37.037 0.00 0.00 0.00 1.40
112 113 6.426937 GCATGGTCACGGTTACTATATCAAAT 59.573 38.462 0.00 0.00 0.00 2.32
113 114 5.756347 GCATGGTCACGGTTACTATATCAAA 59.244 40.000 0.00 0.00 0.00 2.69
114 115 5.294356 GCATGGTCACGGTTACTATATCAA 58.706 41.667 0.00 0.00 0.00 2.57
115 116 4.262292 GGCATGGTCACGGTTACTATATCA 60.262 45.833 0.00 0.00 0.00 2.15
116 117 4.243270 GGCATGGTCACGGTTACTATATC 58.757 47.826 0.00 0.00 0.00 1.63
117 118 3.644265 TGGCATGGTCACGGTTACTATAT 59.356 43.478 0.00 0.00 0.00 0.86
118 119 3.032459 TGGCATGGTCACGGTTACTATA 58.968 45.455 0.00 0.00 0.00 1.31
119 120 1.834896 TGGCATGGTCACGGTTACTAT 59.165 47.619 0.00 0.00 0.00 2.12
120 121 1.066716 GTGGCATGGTCACGGTTACTA 60.067 52.381 0.00 0.00 0.00 1.82
121 122 0.321298 GTGGCATGGTCACGGTTACT 60.321 55.000 0.00 0.00 0.00 2.24
122 123 2.168054 GTGGCATGGTCACGGTTAC 58.832 57.895 0.00 0.00 0.00 2.50
123 124 4.705746 GTGGCATGGTCACGGTTA 57.294 55.556 0.00 0.00 0.00 2.85
128 129 1.514678 TTGAAGCGTGGCATGGTCAC 61.515 55.000 12.40 10.00 34.49 3.67
129 130 0.821301 TTTGAAGCGTGGCATGGTCA 60.821 50.000 12.40 9.09 0.00 4.02
130 131 0.313672 TTTTGAAGCGTGGCATGGTC 59.686 50.000 12.40 6.63 0.00 4.02
131 132 0.749649 TTTTTGAAGCGTGGCATGGT 59.250 45.000 5.40 5.40 0.00 3.55
132 133 1.139163 GTTTTTGAAGCGTGGCATGG 58.861 50.000 9.08 0.00 0.00 3.66
133 134 2.138596 AGTTTTTGAAGCGTGGCATG 57.861 45.000 1.31 1.31 0.00 4.06
134 135 3.146066 TCTAGTTTTTGAAGCGTGGCAT 58.854 40.909 0.00 0.00 0.00 4.40
135 136 2.566913 TCTAGTTTTTGAAGCGTGGCA 58.433 42.857 0.00 0.00 0.00 4.92
136 137 3.831715 ATCTAGTTTTTGAAGCGTGGC 57.168 42.857 0.00 0.00 0.00 5.01
137 138 4.475944 CCAATCTAGTTTTTGAAGCGTGG 58.524 43.478 0.00 0.00 0.00 4.94
138 139 4.023193 ACCCAATCTAGTTTTTGAAGCGTG 60.023 41.667 0.00 0.00 0.00 5.34
139 140 4.023193 CACCCAATCTAGTTTTTGAAGCGT 60.023 41.667 0.00 0.00 0.00 5.07
140 141 4.215399 TCACCCAATCTAGTTTTTGAAGCG 59.785 41.667 0.00 0.00 0.00 4.68
141 142 5.705609 TCACCCAATCTAGTTTTTGAAGC 57.294 39.130 0.00 0.00 0.00 3.86
142 143 7.452880 TGATCACCCAATCTAGTTTTTGAAG 57.547 36.000 0.00 0.00 0.00 3.02
143 144 7.831691 TTGATCACCCAATCTAGTTTTTGAA 57.168 32.000 0.00 0.00 0.00 2.69
144 145 7.831691 TTTGATCACCCAATCTAGTTTTTGA 57.168 32.000 0.00 0.00 0.00 2.69
145 146 7.384932 GGTTTTGATCACCCAATCTAGTTTTTG 59.615 37.037 0.00 0.00 0.00 2.44
146 147 7.070571 TGGTTTTGATCACCCAATCTAGTTTTT 59.929 33.333 0.00 0.00 32.71 1.94
147 148 6.553100 TGGTTTTGATCACCCAATCTAGTTTT 59.447 34.615 0.00 0.00 32.71 2.43
148 149 6.074648 TGGTTTTGATCACCCAATCTAGTTT 58.925 36.000 0.00 0.00 32.71 2.66
149 150 5.640147 TGGTTTTGATCACCCAATCTAGTT 58.360 37.500 0.00 0.00 32.71 2.24
150 151 5.255397 TGGTTTTGATCACCCAATCTAGT 57.745 39.130 0.00 0.00 32.71 2.57
151 152 6.567050 CATTGGTTTTGATCACCCAATCTAG 58.433 40.000 21.96 12.78 43.92 2.43
152 153 5.105392 GCATTGGTTTTGATCACCCAATCTA 60.105 40.000 21.96 4.98 43.92 1.98
153 154 4.322953 GCATTGGTTTTGATCACCCAATCT 60.323 41.667 21.96 8.53 43.92 2.40
154 155 3.934579 GCATTGGTTTTGATCACCCAATC 59.065 43.478 21.96 15.83 43.92 2.67
155 156 3.307621 GGCATTGGTTTTGATCACCCAAT 60.308 43.478 20.23 20.23 46.04 3.16
156 157 2.038295 GGCATTGGTTTTGATCACCCAA 59.962 45.455 18.16 18.16 40.95 4.12
157 158 1.622811 GGCATTGGTTTTGATCACCCA 59.377 47.619 0.00 0.00 32.71 4.51
158 159 1.066215 GGGCATTGGTTTTGATCACCC 60.066 52.381 0.00 0.00 32.71 4.61
159 160 1.622811 TGGGCATTGGTTTTGATCACC 59.377 47.619 0.00 0.00 34.52 4.02
160 161 3.006752 TCTTGGGCATTGGTTTTGATCAC 59.993 43.478 0.00 0.00 0.00 3.06
161 162 3.237746 TCTTGGGCATTGGTTTTGATCA 58.762 40.909 0.00 0.00 0.00 2.92
162 163 3.959535 TCTTGGGCATTGGTTTTGATC 57.040 42.857 0.00 0.00 0.00 2.92
163 164 3.119029 CGATCTTGGGCATTGGTTTTGAT 60.119 43.478 0.00 0.00 0.00 2.57
164 165 2.230992 CGATCTTGGGCATTGGTTTTGA 59.769 45.455 0.00 0.00 0.00 2.69
165 166 2.609350 CGATCTTGGGCATTGGTTTTG 58.391 47.619 0.00 0.00 0.00 2.44
166 167 1.066929 GCGATCTTGGGCATTGGTTTT 60.067 47.619 0.00 0.00 0.00 2.43
167 168 0.532115 GCGATCTTGGGCATTGGTTT 59.468 50.000 0.00 0.00 0.00 3.27
168 169 0.323725 AGCGATCTTGGGCATTGGTT 60.324 50.000 0.00 0.00 0.00 3.67
169 170 0.749454 GAGCGATCTTGGGCATTGGT 60.749 55.000 0.00 0.00 0.00 3.67
170 171 0.465097 AGAGCGATCTTGGGCATTGG 60.465 55.000 0.00 0.00 0.00 3.16
171 172 1.332997 GAAGAGCGATCTTGGGCATTG 59.667 52.381 22.47 0.00 0.00 2.82
172 173 1.673168 GAAGAGCGATCTTGGGCATT 58.327 50.000 22.47 0.00 0.00 3.56
173 174 0.179034 GGAAGAGCGATCTTGGGCAT 60.179 55.000 22.47 0.00 0.00 4.40
174 175 1.221840 GGAAGAGCGATCTTGGGCA 59.778 57.895 22.47 0.00 0.00 5.36
175 176 1.884926 CGGAAGAGCGATCTTGGGC 60.885 63.158 22.47 6.34 0.00 5.36
176 177 0.175760 TTCGGAAGAGCGATCTTGGG 59.824 55.000 22.47 12.08 43.69 4.12
177 178 1.661112 GTTTCGGAAGAGCGATCTTGG 59.339 52.381 22.47 12.45 43.69 3.61
178 179 2.092838 GTGTTTCGGAAGAGCGATCTTG 59.907 50.000 22.47 7.58 43.69 3.02
179 180 2.338500 GTGTTTCGGAAGAGCGATCTT 58.662 47.619 17.16 17.16 43.69 2.40
180 181 1.404315 GGTGTTTCGGAAGAGCGATCT 60.404 52.381 0.00 0.00 43.69 2.75
181 182 1.000145 GGTGTTTCGGAAGAGCGATC 59.000 55.000 0.00 0.00 43.69 3.69
182 183 0.320374 TGGTGTTTCGGAAGAGCGAT 59.680 50.000 0.00 0.00 43.69 4.58
183 184 0.599204 GTGGTGTTTCGGAAGAGCGA 60.599 55.000 0.00 0.00 43.69 4.93
184 185 0.878523 TGTGGTGTTTCGGAAGAGCG 60.879 55.000 0.00 0.00 43.69 5.03
185 186 1.523758 ATGTGGTGTTTCGGAAGAGC 58.476 50.000 0.00 0.00 43.69 4.09
186 187 4.036262 TGAAAATGTGGTGTTTCGGAAGAG 59.964 41.667 0.00 0.00 43.69 2.85
187 188 3.948473 TGAAAATGTGGTGTTTCGGAAGA 59.052 39.130 0.00 0.00 36.69 2.87
188 189 4.300189 TGAAAATGTGGTGTTTCGGAAG 57.700 40.909 0.00 0.00 36.69 3.46
189 190 4.927978 ATGAAAATGTGGTGTTTCGGAA 57.072 36.364 0.00 0.00 36.69 4.30
190 191 4.927978 AATGAAAATGTGGTGTTTCGGA 57.072 36.364 0.00 0.00 36.69 4.55
191 192 6.865726 TCATAAATGAAAATGTGGTGTTTCGG 59.134 34.615 0.00 0.00 36.69 4.30
192 193 7.865875 TCATAAATGAAAATGTGGTGTTTCG 57.134 32.000 0.00 0.00 36.69 3.46
193 194 8.223100 GCTTCATAAATGAAAATGTGGTGTTTC 58.777 33.333 6.82 0.00 45.26 2.78
194 195 7.095691 CGCTTCATAAATGAAAATGTGGTGTTT 60.096 33.333 6.82 0.00 45.26 2.83
195 196 6.365789 CGCTTCATAAATGAAAATGTGGTGTT 59.634 34.615 6.82 0.00 45.26 3.32
196 197 5.863397 CGCTTCATAAATGAAAATGTGGTGT 59.137 36.000 6.82 0.00 45.26 4.16
197 198 5.220265 GCGCTTCATAAATGAAAATGTGGTG 60.220 40.000 0.00 2.72 45.26 4.17
198 199 4.864247 GCGCTTCATAAATGAAAATGTGGT 59.136 37.500 0.00 0.00 45.26 4.16
199 200 5.104374 AGCGCTTCATAAATGAAAATGTGG 58.896 37.500 2.64 0.00 45.26 4.17
200 201 6.505265 CGAAGCGCTTCATAAATGAAAATGTG 60.505 38.462 40.22 19.98 45.26 3.21
201 202 5.512788 CGAAGCGCTTCATAAATGAAAATGT 59.487 36.000 40.22 8.49 45.26 2.71
202 203 5.512788 ACGAAGCGCTTCATAAATGAAAATG 59.487 36.000 40.22 24.96 45.26 2.32
203 204 5.640732 ACGAAGCGCTTCATAAATGAAAAT 58.359 33.333 40.22 9.60 45.26 1.82
204 205 5.041951 ACGAAGCGCTTCATAAATGAAAA 57.958 34.783 40.22 0.00 45.26 2.29
205 206 4.678509 ACGAAGCGCTTCATAAATGAAA 57.321 36.364 40.22 0.00 45.26 2.69
206 207 4.678509 AACGAAGCGCTTCATAAATGAA 57.321 36.364 40.22 5.34 43.94 2.57
207 208 4.391830 AGAAACGAAGCGCTTCATAAATGA 59.608 37.500 40.22 0.00 39.46 2.57
208 209 4.493350 CAGAAACGAAGCGCTTCATAAATG 59.507 41.667 40.22 29.53 39.46 2.32
209 210 4.391830 TCAGAAACGAAGCGCTTCATAAAT 59.608 37.500 40.22 25.05 39.46 1.40
210 211 3.743911 TCAGAAACGAAGCGCTTCATAAA 59.256 39.130 40.22 20.81 39.46 1.40
211 212 3.322369 TCAGAAACGAAGCGCTTCATAA 58.678 40.909 40.22 20.34 39.46 1.90
212 213 2.954316 TCAGAAACGAAGCGCTTCATA 58.046 42.857 40.22 15.49 39.46 2.15
213 214 1.795768 TCAGAAACGAAGCGCTTCAT 58.204 45.000 40.22 29.73 39.46 2.57
214 215 1.795768 ATCAGAAACGAAGCGCTTCA 58.204 45.000 40.22 24.67 39.46 3.02
215 216 2.285313 GCTATCAGAAACGAAGCGCTTC 60.285 50.000 34.98 34.98 32.98 3.86
216 217 1.661112 GCTATCAGAAACGAAGCGCTT 59.339 47.619 25.35 25.35 0.00 4.68
217 218 1.281899 GCTATCAGAAACGAAGCGCT 58.718 50.000 2.64 2.64 0.00 5.92
218 219 3.788874 GCTATCAGAAACGAAGCGC 57.211 52.632 0.00 0.00 0.00 5.92
220 221 2.029365 GGAACGCTATCAGAAACGAAGC 59.971 50.000 0.00 0.00 0.00 3.86
221 222 2.603560 GGGAACGCTATCAGAAACGAAG 59.396 50.000 0.00 0.00 0.00 3.79
222 223 2.028839 TGGGAACGCTATCAGAAACGAA 60.029 45.455 0.00 0.00 0.00 3.85
223 224 1.546923 TGGGAACGCTATCAGAAACGA 59.453 47.619 0.00 0.00 0.00 3.85
224 225 2.004583 TGGGAACGCTATCAGAAACG 57.995 50.000 0.00 0.00 0.00 3.60
225 226 4.759516 TTTTGGGAACGCTATCAGAAAC 57.240 40.909 0.00 0.00 0.00 2.78
244 245 3.181487 GGCGTGCATGGATCTGTATTTTT 60.181 43.478 8.27 0.00 0.00 1.94
245 246 2.358898 GGCGTGCATGGATCTGTATTTT 59.641 45.455 8.27 0.00 0.00 1.82
246 247 1.949525 GGCGTGCATGGATCTGTATTT 59.050 47.619 8.27 0.00 0.00 1.40
247 248 1.141657 AGGCGTGCATGGATCTGTATT 59.858 47.619 8.27 0.00 0.00 1.89
248 249 0.761187 AGGCGTGCATGGATCTGTAT 59.239 50.000 8.27 0.00 0.00 2.29
249 250 0.104855 GAGGCGTGCATGGATCTGTA 59.895 55.000 8.27 0.00 0.00 2.74
250 251 1.153289 GAGGCGTGCATGGATCTGT 60.153 57.895 8.27 0.00 0.00 3.41
251 252 0.534427 ATGAGGCGTGCATGGATCTG 60.534 55.000 8.27 0.00 0.00 2.90
252 253 0.534427 CATGAGGCGTGCATGGATCT 60.534 55.000 8.27 0.00 39.48 2.75
253 254 0.816825 ACATGAGGCGTGCATGGATC 60.817 55.000 17.72 0.00 45.62 3.36
254 255 0.816825 GACATGAGGCGTGCATGGAT 60.817 55.000 17.72 3.12 45.62 3.41
255 256 1.450134 GACATGAGGCGTGCATGGA 60.450 57.895 17.72 0.00 45.62 3.41
256 257 1.450848 AGACATGAGGCGTGCATGG 60.451 57.895 17.72 0.00 45.62 3.66
257 258 0.741927 TCAGACATGAGGCGTGCATG 60.742 55.000 0.00 13.77 46.49 4.06
258 259 0.036105 TTCAGACATGAGGCGTGCAT 60.036 50.000 0.00 0.00 36.61 3.96
259 260 0.250252 TTTCAGACATGAGGCGTGCA 60.250 50.000 0.00 0.00 36.61 4.57
260 261 0.874390 TTTTCAGACATGAGGCGTGC 59.126 50.000 0.00 0.00 36.61 5.34
261 262 3.837213 AATTTTCAGACATGAGGCGTG 57.163 42.857 0.00 0.00 36.61 5.34
262 263 3.057315 CCAAATTTTCAGACATGAGGCGT 60.057 43.478 0.00 0.00 36.61 5.68
263 264 3.191162 TCCAAATTTTCAGACATGAGGCG 59.809 43.478 0.00 0.00 36.61 5.52
264 265 4.789012 TCCAAATTTTCAGACATGAGGC 57.211 40.909 0.00 0.00 36.61 4.70
265 266 5.337009 CCCTTCCAAATTTTCAGACATGAGG 60.337 44.000 0.00 0.00 36.61 3.86
266 267 5.717119 CCCTTCCAAATTTTCAGACATGAG 58.283 41.667 0.00 0.00 36.61 2.90
267 268 4.021192 GCCCTTCCAAATTTTCAGACATGA 60.021 41.667 0.00 0.00 0.00 3.07
268 269 4.248058 GCCCTTCCAAATTTTCAGACATG 58.752 43.478 0.00 0.00 0.00 3.21
269 270 3.903090 TGCCCTTCCAAATTTTCAGACAT 59.097 39.130 0.00 0.00 0.00 3.06
270 271 3.069443 GTGCCCTTCCAAATTTTCAGACA 59.931 43.478 0.00 0.00 0.00 3.41
271 272 3.554960 GGTGCCCTTCCAAATTTTCAGAC 60.555 47.826 0.00 0.00 0.00 3.51
272 273 2.632512 GGTGCCCTTCCAAATTTTCAGA 59.367 45.455 0.00 0.00 0.00 3.27
273 274 2.368221 TGGTGCCCTTCCAAATTTTCAG 59.632 45.455 0.00 0.00 31.50 3.02
274 275 2.402564 TGGTGCCCTTCCAAATTTTCA 58.597 42.857 0.00 0.00 31.50 2.69
275 276 3.402110 CTTGGTGCCCTTCCAAATTTTC 58.598 45.455 0.00 0.00 43.16 2.29
276 277 2.106338 CCTTGGTGCCCTTCCAAATTTT 59.894 45.455 0.00 0.00 43.16 1.82
277 278 1.699083 CCTTGGTGCCCTTCCAAATTT 59.301 47.619 0.00 0.00 43.16 1.82
278 279 1.351076 CCTTGGTGCCCTTCCAAATT 58.649 50.000 0.00 0.00 43.16 1.82
279 280 0.190815 ACCTTGGTGCCCTTCCAAAT 59.809 50.000 0.00 0.00 43.16 2.32
280 281 0.758685 CACCTTGGTGCCCTTCCAAA 60.759 55.000 6.88 0.00 43.16 3.28
281 282 1.152567 CACCTTGGTGCCCTTCCAA 60.153 57.895 6.88 0.00 41.84 3.53
282 283 2.520458 CACCTTGGTGCCCTTCCA 59.480 61.111 6.88 0.00 0.00 3.53
283 284 2.991540 GCACCTTGGTGCCCTTCC 60.992 66.667 28.75 5.45 43.99 3.46
290 291 4.601794 TGCCCCTGCACCTTGGTG 62.602 66.667 14.94 14.94 44.23 4.17
299 300 2.910994 GGAGATGCATGCCCCTGC 60.911 66.667 16.68 13.32 42.62 4.85
300 301 2.203451 GGGAGATGCATGCCCCTG 60.203 66.667 19.36 0.00 35.76 4.45
304 305 3.201707 ATCCGGGGAGATGCATGCC 62.202 63.158 16.68 5.13 0.00 4.40
305 306 1.673665 GATCCGGGGAGATGCATGC 60.674 63.158 11.82 11.82 0.00 4.06
306 307 0.109153 TTGATCCGGGGAGATGCATG 59.891 55.000 2.46 0.00 0.00 4.06
307 308 0.846015 TTTGATCCGGGGAGATGCAT 59.154 50.000 0.00 0.00 0.00 3.96
308 309 0.846015 ATTTGATCCGGGGAGATGCA 59.154 50.000 0.00 0.00 0.00 3.96
309 310 1.202806 TCATTTGATCCGGGGAGATGC 60.203 52.381 0.00 0.00 0.00 3.91
310 311 2.936919 TCATTTGATCCGGGGAGATG 57.063 50.000 0.00 0.39 0.00 2.90
311 312 2.553904 GCATCATTTGATCCGGGGAGAT 60.554 50.000 0.00 0.00 31.21 2.75
312 313 1.202806 GCATCATTTGATCCGGGGAGA 60.203 52.381 0.00 0.00 31.21 3.71
313 314 1.202855 AGCATCATTTGATCCGGGGAG 60.203 52.381 0.00 0.00 31.21 4.30
314 315 0.846015 AGCATCATTTGATCCGGGGA 59.154 50.000 0.00 0.00 31.21 4.81
315 316 1.610522 GAAGCATCATTTGATCCGGGG 59.389 52.381 0.00 0.00 31.21 5.73
316 317 1.265095 CGAAGCATCATTTGATCCGGG 59.735 52.381 0.00 0.00 31.21 5.73
317 318 1.942657 ACGAAGCATCATTTGATCCGG 59.057 47.619 0.00 0.00 31.21 5.14
318 319 2.609002 TCACGAAGCATCATTTGATCCG 59.391 45.455 0.00 0.00 31.21 4.18
319 320 4.514441 AGATCACGAAGCATCATTTGATCC 59.486 41.667 15.96 5.03 37.03 3.36
320 321 5.670149 AGATCACGAAGCATCATTTGATC 57.330 39.130 13.42 13.42 36.82 2.92
321 322 8.837788 TTATAGATCACGAAGCATCATTTGAT 57.162 30.769 0.00 0.00 34.56 2.57
322 323 8.551205 GTTTATAGATCACGAAGCATCATTTGA 58.449 33.333 0.00 0.00 0.00 2.69
323 324 8.554528 AGTTTATAGATCACGAAGCATCATTTG 58.445 33.333 0.00 0.00 0.00 2.32
324 325 8.668510 AGTTTATAGATCACGAAGCATCATTT 57.331 30.769 0.00 0.00 0.00 2.32
325 326 7.928167 TGAGTTTATAGATCACGAAGCATCATT 59.072 33.333 0.00 0.00 0.00 2.57
326 327 7.436933 TGAGTTTATAGATCACGAAGCATCAT 58.563 34.615 0.00 0.00 0.00 2.45
327 328 6.805713 TGAGTTTATAGATCACGAAGCATCA 58.194 36.000 0.00 0.00 0.00 3.07
328 329 7.881643 ATGAGTTTATAGATCACGAAGCATC 57.118 36.000 0.00 0.00 0.00 3.91
329 330 8.554528 CAAATGAGTTTATAGATCACGAAGCAT 58.445 33.333 0.00 0.00 0.00 3.79
330 331 7.763985 TCAAATGAGTTTATAGATCACGAAGCA 59.236 33.333 0.00 0.00 0.00 3.91
331 332 8.131455 TCAAATGAGTTTATAGATCACGAAGC 57.869 34.615 0.00 0.00 0.00 3.86
334 335 9.430623 TGTTTCAAATGAGTTTATAGATCACGA 57.569 29.630 0.00 0.00 0.00 4.35
350 351 9.880064 TGCATTGACAATTTTATGTTTCAAATG 57.120 25.926 0.00 0.00 32.57 2.32
352 353 9.880064 CATGCATTGACAATTTTATGTTTCAAA 57.120 25.926 0.00 0.00 32.57 2.69
353 354 9.053840 ACATGCATTGACAATTTTATGTTTCAA 57.946 25.926 0.00 0.00 32.57 2.69
354 355 8.604640 ACATGCATTGACAATTTTATGTTTCA 57.395 26.923 0.00 0.00 32.57 2.69
357 358 9.656040 ACATACATGCATTGACAATTTTATGTT 57.344 25.926 18.97 9.98 32.57 2.71
358 359 9.656040 AACATACATGCATTGACAATTTTATGT 57.344 25.926 18.30 18.30 35.90 2.29
361 362 9.486497 ACAAACATACATGCATTGACAATTTTA 57.514 25.926 0.00 0.00 34.18 1.52
362 363 8.380743 ACAAACATACATGCATTGACAATTTT 57.619 26.923 0.00 0.00 34.18 1.82
363 364 7.966246 ACAAACATACATGCATTGACAATTT 57.034 28.000 0.00 0.00 34.18 1.82
364 365 9.656040 AATACAAACATACATGCATTGACAATT 57.344 25.926 0.00 7.97 34.18 2.32
365 366 9.304731 GAATACAAACATACATGCATTGACAAT 57.695 29.630 0.00 0.00 34.18 2.71
366 367 8.302438 TGAATACAAACATACATGCATTGACAA 58.698 29.630 0.00 0.00 34.18 3.18
367 368 7.824672 TGAATACAAACATACATGCATTGACA 58.175 30.769 0.00 6.70 34.18 3.58
368 369 8.686397 TTGAATACAAACATACATGCATTGAC 57.314 30.769 0.00 5.05 34.18 3.18
369 370 8.522003 ACTTGAATACAAACATACATGCATTGA 58.478 29.630 0.00 0.00 35.49 2.57
370 371 8.692110 ACTTGAATACAAACATACATGCATTG 57.308 30.769 0.00 0.00 35.49 2.82
372 373 9.787532 GTTACTTGAATACAAACATACATGCAT 57.212 29.630 0.00 0.00 35.49 3.96
373 374 8.240682 GGTTACTTGAATACAAACATACATGCA 58.759 33.333 0.00 0.00 35.49 3.96
374 375 8.458843 AGGTTACTTGAATACAAACATACATGC 58.541 33.333 0.00 0.00 35.49 4.06
439 440 9.236006 ACAGATTACTCATCAGCTTAACAAAAT 57.764 29.630 0.00 0.00 33.75 1.82
440 441 8.621532 ACAGATTACTCATCAGCTTAACAAAA 57.378 30.769 0.00 0.00 33.75 2.44
441 442 8.621532 AACAGATTACTCATCAGCTTAACAAA 57.378 30.769 0.00 0.00 33.75 2.83
442 443 8.621532 AAACAGATTACTCATCAGCTTAACAA 57.378 30.769 0.00 0.00 33.75 2.83
443 444 7.877612 TGAAACAGATTACTCATCAGCTTAACA 59.122 33.333 0.00 0.00 33.75 2.41
444 445 8.256611 TGAAACAGATTACTCATCAGCTTAAC 57.743 34.615 0.00 0.00 33.75 2.01
445 446 8.097038 ACTGAAACAGATTACTCATCAGCTTAA 58.903 33.333 5.76 0.00 35.18 1.85
446 447 7.615403 ACTGAAACAGATTACTCATCAGCTTA 58.385 34.615 5.76 0.00 35.18 3.09
447 448 6.471146 ACTGAAACAGATTACTCATCAGCTT 58.529 36.000 5.76 0.00 35.18 3.74
448 449 6.047511 ACTGAAACAGATTACTCATCAGCT 57.952 37.500 5.76 0.00 35.18 4.24
449 450 7.038659 AGTACTGAAACAGATTACTCATCAGC 58.961 38.462 0.00 0.00 35.18 4.26
450 451 8.994429 AAGTACTGAAACAGATTACTCATCAG 57.006 34.615 0.00 0.00 35.18 2.90
451 452 9.778741 AAAAGTACTGAAACAGATTACTCATCA 57.221 29.630 0.00 0.00 35.18 3.07
453 454 9.003658 CCAAAAGTACTGAAACAGATTACTCAT 57.996 33.333 0.00 0.00 35.18 2.90
454 455 7.990886 ACCAAAAGTACTGAAACAGATTACTCA 59.009 33.333 0.00 0.00 35.18 3.41
455 456 8.379457 ACCAAAAGTACTGAAACAGATTACTC 57.621 34.615 0.00 0.00 35.18 2.59
456 457 8.747538 AACCAAAAGTACTGAAACAGATTACT 57.252 30.769 0.00 1.80 35.18 2.24
457 458 9.797556 AAAACCAAAAGTACTGAAACAGATTAC 57.202 29.630 0.00 0.00 35.18 1.89
458 459 9.796120 CAAAACCAAAAGTACTGAAACAGATTA 57.204 29.630 0.00 0.00 35.18 1.75
459 460 7.763985 CCAAAACCAAAAGTACTGAAACAGATT 59.236 33.333 0.00 0.00 35.18 2.40
460 461 7.264947 CCAAAACCAAAAGTACTGAAACAGAT 58.735 34.615 0.00 0.00 35.18 2.90
461 462 6.350612 CCCAAAACCAAAAGTACTGAAACAGA 60.351 38.462 0.00 0.00 35.18 3.41
462 463 5.810074 CCCAAAACCAAAAGTACTGAAACAG 59.190 40.000 0.00 0.00 37.52 3.16
463 464 5.246429 ACCCAAAACCAAAAGTACTGAAACA 59.754 36.000 0.00 0.00 0.00 2.83
464 465 5.726397 ACCCAAAACCAAAAGTACTGAAAC 58.274 37.500 0.00 0.00 0.00 2.78
465 466 5.105269 GGACCCAAAACCAAAAGTACTGAAA 60.105 40.000 0.00 0.00 0.00 2.69
466 467 4.403113 GGACCCAAAACCAAAAGTACTGAA 59.597 41.667 0.00 0.00 0.00 3.02
467 468 3.955551 GGACCCAAAACCAAAAGTACTGA 59.044 43.478 0.00 0.00 0.00 3.41
468 469 3.243267 CGGACCCAAAACCAAAAGTACTG 60.243 47.826 0.00 0.00 0.00 2.74
469 470 2.953648 CGGACCCAAAACCAAAAGTACT 59.046 45.455 0.00 0.00 0.00 2.73
470 471 2.689471 ACGGACCCAAAACCAAAAGTAC 59.311 45.455 0.00 0.00 0.00 2.73
471 472 3.015675 ACGGACCCAAAACCAAAAGTA 57.984 42.857 0.00 0.00 0.00 2.24
472 473 1.855295 ACGGACCCAAAACCAAAAGT 58.145 45.000 0.00 0.00 0.00 2.66
473 474 2.971660 AACGGACCCAAAACCAAAAG 57.028 45.000 0.00 0.00 0.00 2.27
474 475 4.161754 ACATAAACGGACCCAAAACCAAAA 59.838 37.500 0.00 0.00 0.00 2.44
475 476 3.705072 ACATAAACGGACCCAAAACCAAA 59.295 39.130 0.00 0.00 0.00 3.28
476 477 3.297736 ACATAAACGGACCCAAAACCAA 58.702 40.909 0.00 0.00 0.00 3.67
477 478 2.885894 GACATAAACGGACCCAAAACCA 59.114 45.455 0.00 0.00 0.00 3.67
478 479 2.885894 TGACATAAACGGACCCAAAACC 59.114 45.455 0.00 0.00 0.00 3.27
479 480 3.315749 TGTGACATAAACGGACCCAAAAC 59.684 43.478 0.00 0.00 0.00 2.43
480 481 3.552875 TGTGACATAAACGGACCCAAAA 58.447 40.909 0.00 0.00 0.00 2.44
481 482 3.210232 TGTGACATAAACGGACCCAAA 57.790 42.857 0.00 0.00 0.00 3.28
482 483 2.932855 TGTGACATAAACGGACCCAA 57.067 45.000 0.00 0.00 0.00 4.12
483 484 2.569853 AGATGTGACATAAACGGACCCA 59.430 45.455 0.00 0.00 0.00 4.51
484 485 3.261981 AGATGTGACATAAACGGACCC 57.738 47.619 0.00 0.00 0.00 4.46
485 486 6.281405 AGATTAGATGTGACATAAACGGACC 58.719 40.000 0.00 0.00 0.00 4.46
486 487 8.136165 AGTAGATTAGATGTGACATAAACGGAC 58.864 37.037 0.00 0.00 0.00 4.79
487 488 8.234136 AGTAGATTAGATGTGACATAAACGGA 57.766 34.615 0.00 0.00 0.00 4.69
488 489 9.395707 GTAGTAGATTAGATGTGACATAAACGG 57.604 37.037 0.00 0.00 0.00 4.44
489 490 9.395707 GGTAGTAGATTAGATGTGACATAAACG 57.604 37.037 0.00 0.00 0.00 3.60
490 491 9.694137 GGGTAGTAGATTAGATGTGACATAAAC 57.306 37.037 0.00 0.00 0.00 2.01
491 492 8.867097 GGGGTAGTAGATTAGATGTGACATAAA 58.133 37.037 0.00 0.00 0.00 1.40
492 493 8.232412 AGGGGTAGTAGATTAGATGTGACATAA 58.768 37.037 0.00 0.00 0.00 1.90
493 494 7.766628 AGGGGTAGTAGATTAGATGTGACATA 58.233 38.462 0.00 0.00 0.00 2.29
494 495 6.625267 AGGGGTAGTAGATTAGATGTGACAT 58.375 40.000 0.00 0.00 0.00 3.06
495 496 6.027025 AGGGGTAGTAGATTAGATGTGACA 57.973 41.667 0.00 0.00 0.00 3.58
496 497 9.750783 TTATAGGGGTAGTAGATTAGATGTGAC 57.249 37.037 0.00 0.00 0.00 3.67
501 502 9.839185 TGCTTTTATAGGGGTAGTAGATTAGAT 57.161 33.333 0.00 0.00 0.00 1.98
502 503 9.664777 TTGCTTTTATAGGGGTAGTAGATTAGA 57.335 33.333 0.00 0.00 0.00 2.10
503 504 9.930693 CTTGCTTTTATAGGGGTAGTAGATTAG 57.069 37.037 0.00 0.00 0.00 1.73
504 505 9.664777 TCTTGCTTTTATAGGGGTAGTAGATTA 57.335 33.333 0.00 0.00 0.00 1.75
505 506 8.562949 TCTTGCTTTTATAGGGGTAGTAGATT 57.437 34.615 0.00 0.00 0.00 2.40
506 507 8.011290 TCTCTTGCTTTTATAGGGGTAGTAGAT 58.989 37.037 0.00 0.00 0.00 1.98
507 508 7.359849 TCTCTTGCTTTTATAGGGGTAGTAGA 58.640 38.462 0.00 0.00 0.00 2.59
508 509 7.256012 CCTCTCTTGCTTTTATAGGGGTAGTAG 60.256 44.444 0.00 0.00 0.00 2.57
509 510 6.553852 CCTCTCTTGCTTTTATAGGGGTAGTA 59.446 42.308 0.00 0.00 0.00 1.82
510 511 5.367060 CCTCTCTTGCTTTTATAGGGGTAGT 59.633 44.000 0.00 0.00 0.00 2.73
511 512 5.221742 CCCTCTCTTGCTTTTATAGGGGTAG 60.222 48.000 0.00 0.00 38.84 3.18
512 513 4.658901 CCCTCTCTTGCTTTTATAGGGGTA 59.341 45.833 0.00 0.00 38.84 3.69
513 514 3.459969 CCCTCTCTTGCTTTTATAGGGGT 59.540 47.826 0.00 0.00 38.84 4.95
514 515 3.748989 GCCCTCTCTTGCTTTTATAGGGG 60.749 52.174 6.64 0.00 42.12 4.79
533 534 0.250081 GATGATCTGGTTCTCCGCCC 60.250 60.000 0.00 0.00 36.30 6.13
555 556 4.346730 TCAGATTGCAGGTTTTGATGGAT 58.653 39.130 0.00 0.00 0.00 3.41
557 558 4.430007 CATCAGATTGCAGGTTTTGATGG 58.570 43.478 14.18 2.88 38.65 3.51
580 581 3.235200 AGTATGCTGGAGGGATGTAGAC 58.765 50.000 0.00 0.00 0.00 2.59
589 590 1.209128 CGCGTTTAGTATGCTGGAGG 58.791 55.000 0.00 0.00 36.58 4.30
606 607 8.156994 TGGTGGGTAATTAAGATATAAAACGC 57.843 34.615 0.00 0.00 0.00 4.84
615 616 4.534647 TGGCATGGTGGGTAATTAAGAT 57.465 40.909 0.00 0.00 0.00 2.40
616 617 4.534647 ATGGCATGGTGGGTAATTAAGA 57.465 40.909 0.00 0.00 0.00 2.10
634 635 5.689961 GGTGCGTAATTAATTAAGGCAATGG 59.310 40.000 25.11 6.60 36.42 3.16
654 655 2.902423 TTACCCCGATGGCATGGTGC 62.902 60.000 16.03 0.00 44.08 5.01
670 671 7.002879 TCTGATACAGGGGTAGTAGATGTTAC 58.997 42.308 0.00 0.00 31.88 2.50
686 687 3.432890 GCCCCCTCTCTTTTCTGATACAG 60.433 52.174 0.00 0.00 0.00 2.74
693 694 2.780592 GGATTAGCCCCCTCTCTTTTCT 59.219 50.000 0.00 0.00 0.00 2.52
694 695 2.780592 AGGATTAGCCCCCTCTCTTTTC 59.219 50.000 0.00 0.00 37.37 2.29
778 801 4.162690 GATGGAGCGGGCGAGGTT 62.163 66.667 0.00 0.00 0.00 3.50
996 1019 2.710902 CGACCTGGCGACCATCTCA 61.711 63.158 4.82 0.00 30.82 3.27
1335 1788 1.405661 GGTAACCTGACTGTAGCTGCC 60.406 57.143 0.00 0.00 0.00 4.85
1367 1820 5.971763 ACATACAGAGATCAGAACCAAGAC 58.028 41.667 0.00 0.00 0.00 3.01
2133 2795 8.514594 TGTTGTAGGAAAGAATAAGCTTGAATG 58.485 33.333 9.86 0.00 0.00 2.67
2420 3085 5.530543 AGAAGAGCAAGAAAAGTCTTCCTTG 59.469 40.000 17.05 17.05 44.01 3.61
2566 3235 8.402798 TCAAACTCTACAAAATAAATGCCTCA 57.597 30.769 0.00 0.00 0.00 3.86
2593 3262 9.049523 CATGTGATGCTAGATAACAATAACAGT 57.950 33.333 0.00 0.00 0.00 3.55
2717 3390 2.682856 GCAGTTGGAGTTCACTTGTTCA 59.317 45.455 0.00 0.00 0.00 3.18
2818 3497 6.316319 TCAAACTTTTTCACTACACGGTTTC 58.684 36.000 0.00 0.00 0.00 2.78
2856 3535 5.880901 ACATGAAGTCCAACTAATTGTCCT 58.119 37.500 0.00 0.00 33.60 3.85
2964 3643 2.224621 ACCACATGCTGCTGAAGTAAGT 60.225 45.455 0.00 0.00 0.00 2.24
3061 3743 0.827368 GATCTTTGCGACCCCTCTCT 59.173 55.000 0.00 0.00 0.00 3.10
3090 3772 7.066284 GGATGTTTTGAGCATAGTACTTGACAT 59.934 37.037 0.00 4.52 0.00 3.06
3102 3784 2.026641 CCCGATGGATGTTTTGAGCAT 58.973 47.619 0.00 0.00 0.00 3.79
3154 3837 4.188462 CAGTGGATGTAAATCGCTTGGTA 58.812 43.478 0.00 0.00 0.00 3.25


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.