Multiple sequence alignment - TraesCS3A01G510100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G510100 chr3A 100.000 2769 0 0 1 2769 730280978 730278210 0.000000e+00 5114.0
1 TraesCS3A01G510100 chr3A 84.272 1208 90 36 752 1917 730328976 730327827 0.000000e+00 1086.0
2 TraesCS3A01G510100 chr3A 79.254 1099 149 48 856 1917 730208802 730207746 0.000000e+00 693.0
3 TraesCS3A01G510100 chr3A 80.662 936 128 29 856 1769 730178511 730177607 0.000000e+00 676.0
4 TraesCS3A01G510100 chr3A 82.380 664 90 19 812 1459 730267637 730266985 1.120000e-153 553.0
5 TraesCS3A01G510100 chr3A 82.233 636 61 24 3 631 730336970 730336380 4.120000e-138 501.0
6 TraesCS3A01G510100 chr3A 82.609 230 20 10 400 627 730178882 730178671 4.710000e-43 185.0
7 TraesCS3A01G510100 chr3A 77.640 322 33 20 390 692 730267991 730267690 2.850000e-35 159.0
8 TraesCS3A01G510100 chr3A 87.037 108 10 3 2078 2182 593034448 593034554 4.840000e-23 119.0
9 TraesCS3A01G510100 chr3D 92.142 1349 86 8 669 2010 600563048 600564383 0.000000e+00 1886.0
10 TraesCS3A01G510100 chr3D 80.201 1096 133 50 856 1917 600594277 600595322 0.000000e+00 745.0
11 TraesCS3A01G510100 chr3D 79.762 1092 146 49 856 1917 600607698 600608744 0.000000e+00 723.0
12 TraesCS3A01G510100 chr3D 82.071 647 48 22 1 630 600562351 600562946 8.910000e-135 490.0
13 TraesCS3A01G510100 chr3D 82.278 79 12 2 239 315 600591309 600591387 1.780000e-07 67.6
14 TraesCS3A01G510100 chr3B 85.354 1270 98 47 812 2025 807812711 807813948 0.000000e+00 1234.0
15 TraesCS3A01G510100 chr3B 81.644 937 115 36 856 1771 807930227 807931127 0.000000e+00 725.0
16 TraesCS3A01G510100 chr3B 78.760 1097 144 57 850 1917 807881786 807882822 0.000000e+00 652.0
17 TraesCS3A01G510100 chr3B 80.743 592 81 22 885 1459 807855859 807856434 5.480000e-117 431.0
18 TraesCS3A01G510100 chr3B 76.880 359 32 20 279 636 807812285 807812593 3.690000e-34 156.0
19 TraesCS3A01G510100 chr3B 91.089 101 8 1 109 208 807812157 807812257 4.810000e-28 135.0
20 TraesCS3A01G510100 chr3B 100.000 30 0 0 2078 2107 260339512 260339541 3.850000e-04 56.5
21 TraesCS3A01G510100 chrUn 94.872 78 4 0 2105 2182 360193568 360193645 3.750000e-24 122.0
22 TraesCS3A01G510100 chrUn 94.872 78 4 0 2105 2182 396954160 396954083 3.750000e-24 122.0
23 TraesCS3A01G510100 chrUn 94.872 78 4 0 2105 2182 479419753 479419676 3.750000e-24 122.0
24 TraesCS3A01G510100 chr7B 93.902 82 4 1 2102 2182 85134876 85134957 3.750000e-24 122.0
25 TraesCS3A01G510100 chr4A 94.872 78 4 0 2105 2182 669871778 669871701 3.750000e-24 122.0
26 TraesCS3A01G510100 chr2B 93.827 81 5 0 2102 2182 30187524 30187604 3.750000e-24 122.0
27 TraesCS3A01G510100 chr5D 90.217 92 8 1 2091 2182 91616544 91616454 4.840000e-23 119.0
28 TraesCS3A01G510100 chr6B 86.792 106 10 2 2466 2567 543089842 543089947 6.270000e-22 115.0
29 TraesCS3A01G510100 chr6A 87.629 97 10 2 2088 2182 539232181 539232085 8.110000e-21 111.0
30 TraesCS3A01G510100 chr7D 100.000 28 0 0 2404 2431 605585554 605585581 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G510100 chr3A 730278210 730280978 2768 True 5114.000000 5114 100.0000 1 2769 1 chr3A.!!$R2 2768
1 TraesCS3A01G510100 chr3A 730327827 730328976 1149 True 1086.000000 1086 84.2720 752 1917 1 chr3A.!!$R3 1165
2 TraesCS3A01G510100 chr3A 730207746 730208802 1056 True 693.000000 693 79.2540 856 1917 1 chr3A.!!$R1 1061
3 TraesCS3A01G510100 chr3A 730336380 730336970 590 True 501.000000 501 82.2330 3 631 1 chr3A.!!$R4 628
4 TraesCS3A01G510100 chr3A 730177607 730178882 1275 True 430.500000 676 81.6355 400 1769 2 chr3A.!!$R5 1369
5 TraesCS3A01G510100 chr3A 730266985 730267991 1006 True 356.000000 553 80.0100 390 1459 2 chr3A.!!$R6 1069
6 TraesCS3A01G510100 chr3D 600562351 600564383 2032 False 1188.000000 1886 87.1065 1 2010 2 chr3D.!!$F2 2009
7 TraesCS3A01G510100 chr3D 600607698 600608744 1046 False 723.000000 723 79.7620 856 1917 1 chr3D.!!$F1 1061
8 TraesCS3A01G510100 chr3D 600591309 600595322 4013 False 406.300000 745 81.2395 239 1917 2 chr3D.!!$F3 1678
9 TraesCS3A01G510100 chr3B 807930227 807931127 900 False 725.000000 725 81.6440 856 1771 1 chr3B.!!$F4 915
10 TraesCS3A01G510100 chr3B 807881786 807882822 1036 False 652.000000 652 78.7600 850 1917 1 chr3B.!!$F3 1067
11 TraesCS3A01G510100 chr3B 807812157 807813948 1791 False 508.333333 1234 84.4410 109 2025 3 chr3B.!!$F5 1916
12 TraesCS3A01G510100 chr3B 807855859 807856434 575 False 431.000000 431 80.7430 885 1459 1 chr3B.!!$F2 574

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
992 3635 0.035152 TGCTTAGCATCACCACCTGG 60.035 55.0 1.39 0.0 35.7 4.45 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2288 5048 0.036875 GAACCAGGGGTGGAAGACAG 59.963 60.0 0.0 0.0 35.34 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
74 75 6.414732 AGACTAATTATGCAGTTTAGTGGCA 58.585 36.000 18.20 0.00 42.43 4.92
106 107 2.497138 CGCTGCAAATATCTCCCATCA 58.503 47.619 0.00 0.00 0.00 3.07
123 124 5.104151 TCCCATCATGGTTATCTGCTGTTTA 60.104 40.000 2.07 0.00 35.17 2.01
291 310 7.150640 TCATGCTTATGTATGCTTAGTCTCAG 58.849 38.462 2.32 0.00 36.44 3.35
468 2965 2.263945 GCGAGAAAGAGAGTTACAGCC 58.736 52.381 0.00 0.00 0.00 4.85
469 2966 2.094442 GCGAGAAAGAGAGTTACAGCCT 60.094 50.000 0.00 0.00 0.00 4.58
470 2967 3.615351 GCGAGAAAGAGAGTTACAGCCTT 60.615 47.826 0.00 0.00 0.00 4.35
471 2968 4.380655 GCGAGAAAGAGAGTTACAGCCTTA 60.381 45.833 0.00 0.00 0.00 2.69
472 2969 5.096849 CGAGAAAGAGAGTTACAGCCTTAC 58.903 45.833 0.00 0.00 0.00 2.34
473 2970 5.335740 CGAGAAAGAGAGTTACAGCCTTACA 60.336 44.000 0.00 0.00 0.00 2.41
474 2971 6.031751 AGAAAGAGAGTTACAGCCTTACAG 57.968 41.667 0.00 0.00 0.00 2.74
475 2972 4.810191 AAGAGAGTTACAGCCTTACAGG 57.190 45.455 0.00 0.00 38.80 4.00
488 2985 3.255642 GCCTTACAGGAGCACATTTTCAA 59.744 43.478 0.00 0.00 37.67 2.69
491 2988 6.458210 CCTTACAGGAGCACATTTTCAATTT 58.542 36.000 0.00 0.00 37.67 1.82
492 2989 6.930722 CCTTACAGGAGCACATTTTCAATTTT 59.069 34.615 0.00 0.00 37.67 1.82
532 3030 3.765511 AGAGAGAGATATGGATGCTCTGC 59.234 47.826 0.00 0.00 39.00 4.26
550 3048 0.519077 GCTGAAAGGAGCGGAAACAG 59.481 55.000 0.00 0.00 0.00 3.16
575 3073 6.430000 GGAATAACTTTACTGAGTGCTCCAAA 59.570 38.462 0.00 0.00 0.00 3.28
576 3074 7.040686 GGAATAACTTTACTGAGTGCTCCAAAA 60.041 37.037 0.00 0.00 0.00 2.44
577 3075 7.817418 ATAACTTTACTGAGTGCTCCAAAAA 57.183 32.000 0.00 0.00 0.00 1.94
606 3116 4.574892 TGCTCCAAGTTGTCGAATTATCA 58.425 39.130 1.45 0.00 0.00 2.15
651 3186 4.164822 AGAACACGAATCTTGGCAATTG 57.835 40.909 0.00 0.00 0.00 2.32
666 3202 3.416119 CAATTGTGCATGTCAGCCTAG 57.584 47.619 0.00 0.00 0.00 3.02
670 3259 2.910199 TGTGCATGTCAGCCTAGAATC 58.090 47.619 0.00 0.00 0.00 2.52
700 3289 0.537143 CTGTTGGTAGCTGGGTGCAA 60.537 55.000 0.00 0.00 45.94 4.08
716 3305 5.003804 GGGTGCAAAACTTAGAGATTCTGA 58.996 41.667 0.00 0.00 0.00 3.27
778 3367 0.888619 ATTTCTCTGCCGAGTGTCGA 59.111 50.000 4.97 0.00 43.74 4.20
785 3374 0.669619 TGCCGAGTGTCGACAAGTAA 59.330 50.000 21.95 1.12 43.74 2.24
794 3395 5.638783 AGTGTCGACAAGTAACAGCTATAC 58.361 41.667 21.95 2.16 0.00 1.47
836 3438 7.833183 GCAATAATAGAGGGAATCATGGAATCT 59.167 37.037 0.00 0.00 0.00 2.40
851 3456 0.250553 AATCTTCCACGTCCGCCAAA 60.251 50.000 0.00 0.00 0.00 3.28
879 3490 1.550976 GTCCATCTTCTCCGGTCACTT 59.449 52.381 0.00 0.00 0.00 3.16
889 3500 2.372690 CGGTCACTTTCACTCGCCG 61.373 63.158 0.00 0.00 0.00 6.46
992 3635 0.035152 TGCTTAGCATCACCACCTGG 60.035 55.000 1.39 0.00 35.70 4.45
1088 3739 2.552155 GCAGGACCATGTACTCCAACAA 60.552 50.000 0.00 0.00 32.02 2.83
1193 3886 4.758692 CACTGACGTGGAGTGCTT 57.241 55.556 10.53 0.00 37.50 3.91
1195 3888 0.946221 CACTGACGTGGAGTGCTTCC 60.946 60.000 10.53 1.34 46.98 3.46
1368 4091 4.070552 GAGGAGTGCTTCGGCGGT 62.071 66.667 7.21 0.00 45.37 5.68
1371 4094 4.681978 GAGTGCTTCGGCGGTGGT 62.682 66.667 7.21 0.00 45.37 4.16
1398 4121 1.631898 GGGCAGGGGTACTACAAGAAA 59.368 52.381 0.00 0.00 0.00 2.52
1488 4223 7.057894 TCGCCCTGGTAATCAATTAATTAACT 58.942 34.615 0.00 0.00 31.38 2.24
1886 4646 6.534079 TGCTTAAGTACTCTTAATTTCGGCTC 59.466 38.462 4.02 0.00 42.75 4.70
1919 4679 2.020016 GCTGCATGCGTACGTTCG 59.980 61.111 17.90 10.47 0.00 3.95
1956 4716 1.526887 CTCTGTGGTGTAACTTGCGTG 59.473 52.381 0.00 0.00 36.74 5.34
1969 4729 1.392168 CTTGCGTGTGGTACAATACGG 59.608 52.381 19.55 1.32 46.42 4.02
1975 4735 1.473677 TGTGGTACAATACGGGTCGAG 59.526 52.381 0.00 0.00 44.16 4.04
1999 4759 3.602390 ATTTACGCGTGTATGGATTGC 57.398 42.857 24.59 0.00 0.00 3.56
2109 4869 9.495382 ACCTAATAATAAAGGGGTTATTGCAAA 57.505 29.630 1.71 0.00 41.55 3.68
2114 4874 9.830975 ATAATAAAGGGGTTATTGCAAATCAAC 57.169 29.630 1.71 8.24 41.55 3.18
2115 4875 4.551702 AAGGGGTTATTGCAAATCAACC 57.448 40.909 23.08 23.08 39.79 3.77
2116 4876 3.790126 AGGGGTTATTGCAAATCAACCT 58.210 40.909 26.86 19.14 40.27 3.50
2117 4877 3.515104 AGGGGTTATTGCAAATCAACCTG 59.485 43.478 26.86 0.00 40.27 4.00
2118 4878 3.260632 GGGGTTATTGCAAATCAACCTGT 59.739 43.478 26.86 5.14 40.27 4.00
2119 4879 4.244862 GGGTTATTGCAAATCAACCTGTG 58.755 43.478 26.86 0.00 40.27 3.66
2120 4880 3.679502 GGTTATTGCAAATCAACCTGTGC 59.320 43.478 23.53 6.57 37.92 4.57
2121 4881 4.559153 GTTATTGCAAATCAACCTGTGCT 58.441 39.130 1.71 0.00 37.53 4.40
2122 4882 3.756933 ATTGCAAATCAACCTGTGCTT 57.243 38.095 1.71 0.00 37.53 3.91
2123 4883 2.512485 TGCAAATCAACCTGTGCTTG 57.488 45.000 0.00 0.00 37.87 4.01
2124 4884 2.030371 TGCAAATCAACCTGTGCTTGA 58.970 42.857 0.00 0.00 37.87 3.02
2125 4885 2.034939 TGCAAATCAACCTGTGCTTGAG 59.965 45.455 0.00 0.00 37.87 3.02
2126 4886 2.294233 GCAAATCAACCTGTGCTTGAGA 59.706 45.455 0.00 0.00 34.13 3.27
2127 4887 3.057033 GCAAATCAACCTGTGCTTGAGAT 60.057 43.478 0.00 0.00 34.13 2.75
2128 4888 4.482386 CAAATCAACCTGTGCTTGAGATG 58.518 43.478 0.00 0.00 31.22 2.90
2129 4889 2.189594 TCAACCTGTGCTTGAGATGG 57.810 50.000 0.00 0.00 0.00 3.51
2130 4890 1.421268 TCAACCTGTGCTTGAGATGGT 59.579 47.619 0.00 0.00 0.00 3.55
2131 4891 2.158623 TCAACCTGTGCTTGAGATGGTT 60.159 45.455 0.00 0.00 38.18 3.67
2132 4892 3.072330 TCAACCTGTGCTTGAGATGGTTA 59.928 43.478 0.00 0.00 36.22 2.85
2133 4893 3.340814 ACCTGTGCTTGAGATGGTTAG 57.659 47.619 0.00 0.00 0.00 2.34
2134 4894 2.026822 ACCTGTGCTTGAGATGGTTAGG 60.027 50.000 0.00 0.00 0.00 2.69
2135 4895 2.026822 CCTGTGCTTGAGATGGTTAGGT 60.027 50.000 0.00 0.00 0.00 3.08
2136 4896 3.005554 CTGTGCTTGAGATGGTTAGGTG 58.994 50.000 0.00 0.00 0.00 4.00
2137 4897 2.290260 TGTGCTTGAGATGGTTAGGTGG 60.290 50.000 0.00 0.00 0.00 4.61
2138 4898 2.027192 GTGCTTGAGATGGTTAGGTGGA 60.027 50.000 0.00 0.00 0.00 4.02
2139 4899 2.027192 TGCTTGAGATGGTTAGGTGGAC 60.027 50.000 0.00 0.00 0.00 4.02
2140 4900 2.027192 GCTTGAGATGGTTAGGTGGACA 60.027 50.000 0.00 0.00 0.00 4.02
2141 4901 3.866651 CTTGAGATGGTTAGGTGGACAG 58.133 50.000 0.00 0.00 0.00 3.51
2142 4902 2.902608 TGAGATGGTTAGGTGGACAGT 58.097 47.619 0.00 0.00 0.00 3.55
2143 4903 2.567169 TGAGATGGTTAGGTGGACAGTG 59.433 50.000 0.00 0.00 0.00 3.66
2144 4904 1.909302 AGATGGTTAGGTGGACAGTGG 59.091 52.381 0.00 0.00 0.00 4.00
2145 4905 1.628846 GATGGTTAGGTGGACAGTGGT 59.371 52.381 0.00 0.00 0.00 4.16
2146 4906 2.402182 TGGTTAGGTGGACAGTGGTA 57.598 50.000 0.00 0.00 0.00 3.25
2147 4907 2.910544 TGGTTAGGTGGACAGTGGTAT 58.089 47.619 0.00 0.00 0.00 2.73
2148 4908 2.835764 TGGTTAGGTGGACAGTGGTATC 59.164 50.000 0.00 0.00 0.00 2.24
2149 4909 3.105283 GGTTAGGTGGACAGTGGTATCT 58.895 50.000 0.00 0.00 0.00 1.98
2150 4910 3.132467 GGTTAGGTGGACAGTGGTATCTC 59.868 52.174 0.00 0.00 0.00 2.75
2151 4911 1.867363 AGGTGGACAGTGGTATCTCC 58.133 55.000 0.00 0.00 0.00 3.71
2152 4912 1.078823 AGGTGGACAGTGGTATCTCCA 59.921 52.381 0.00 0.00 45.01 3.86
2163 4923 3.041211 TGGTATCTCCAACTCATCAGGG 58.959 50.000 0.00 0.00 44.12 4.45
2164 4924 3.041946 GGTATCTCCAACTCATCAGGGT 58.958 50.000 0.00 0.00 35.97 4.34
2165 4925 3.456277 GGTATCTCCAACTCATCAGGGTT 59.544 47.826 0.00 0.00 35.97 4.11
2166 4926 3.922171 ATCTCCAACTCATCAGGGTTC 57.078 47.619 0.00 0.00 0.00 3.62
2167 4927 2.619931 TCTCCAACTCATCAGGGTTCA 58.380 47.619 0.00 0.00 0.00 3.18
2168 4928 2.978978 TCTCCAACTCATCAGGGTTCAA 59.021 45.455 0.00 0.00 0.00 2.69
2169 4929 3.394274 TCTCCAACTCATCAGGGTTCAAA 59.606 43.478 0.00 0.00 0.00 2.69
2170 4930 4.043310 TCTCCAACTCATCAGGGTTCAAAT 59.957 41.667 0.00 0.00 0.00 2.32
2171 4931 4.335416 TCCAACTCATCAGGGTTCAAATC 58.665 43.478 0.00 0.00 0.00 2.17
2172 4932 3.445096 CCAACTCATCAGGGTTCAAATCC 59.555 47.826 0.00 0.00 0.00 3.01
2173 4933 4.338879 CAACTCATCAGGGTTCAAATCCT 58.661 43.478 0.00 0.00 41.23 3.24
2178 4938 3.363787 AGGGTTCAAATCCTGGTGC 57.636 52.632 0.00 0.00 38.36 5.01
2179 4939 0.779997 AGGGTTCAAATCCTGGTGCT 59.220 50.000 0.00 0.00 38.36 4.40
2180 4940 1.177401 GGGTTCAAATCCTGGTGCTC 58.823 55.000 0.00 0.00 0.00 4.26
2181 4941 0.804989 GGTTCAAATCCTGGTGCTCG 59.195 55.000 0.00 0.00 0.00 5.03
2182 4942 1.610624 GGTTCAAATCCTGGTGCTCGA 60.611 52.381 0.00 0.00 0.00 4.04
2183 4943 2.151202 GTTCAAATCCTGGTGCTCGAA 58.849 47.619 0.00 0.00 0.00 3.71
2184 4944 2.552315 GTTCAAATCCTGGTGCTCGAAA 59.448 45.455 0.00 0.00 0.00 3.46
2185 4945 2.151202 TCAAATCCTGGTGCTCGAAAC 58.849 47.619 0.00 0.00 0.00 2.78
2186 4946 1.135972 CAAATCCTGGTGCTCGAAACG 60.136 52.381 0.00 0.00 0.00 3.60
2187 4947 0.320374 AATCCTGGTGCTCGAAACGA 59.680 50.000 0.00 0.00 0.00 3.85
2188 4948 0.537188 ATCCTGGTGCTCGAAACGAT 59.463 50.000 0.00 0.00 34.61 3.73
2189 4949 0.320374 TCCTGGTGCTCGAAACGATT 59.680 50.000 0.00 0.00 34.61 3.34
2190 4950 0.721718 CCTGGTGCTCGAAACGATTC 59.278 55.000 0.00 0.00 34.61 2.52
2191 4951 1.428448 CTGGTGCTCGAAACGATTCA 58.572 50.000 6.23 0.00 34.61 2.57
2192 4952 2.002586 CTGGTGCTCGAAACGATTCAT 58.997 47.619 6.23 0.00 34.61 2.57
2193 4953 2.416547 CTGGTGCTCGAAACGATTCATT 59.583 45.455 6.23 0.00 34.61 2.57
2194 4954 2.811431 TGGTGCTCGAAACGATTCATTT 59.189 40.909 6.23 0.00 34.61 2.32
2195 4955 3.252215 TGGTGCTCGAAACGATTCATTTT 59.748 39.130 6.23 0.00 34.61 1.82
2196 4956 4.226761 GGTGCTCGAAACGATTCATTTTT 58.773 39.130 6.23 0.00 34.61 1.94
2219 4979 4.764679 TTTCAAAGTTGTCATCATCCGG 57.235 40.909 0.00 0.00 0.00 5.14
2220 4980 3.417069 TCAAAGTTGTCATCATCCGGT 57.583 42.857 0.00 0.00 0.00 5.28
2221 4981 3.750371 TCAAAGTTGTCATCATCCGGTT 58.250 40.909 0.00 0.00 0.00 4.44
2222 4982 3.751175 TCAAAGTTGTCATCATCCGGTTC 59.249 43.478 0.00 0.00 0.00 3.62
2223 4983 3.417069 AAGTTGTCATCATCCGGTTCA 57.583 42.857 0.00 0.00 0.00 3.18
2224 4984 2.977914 AGTTGTCATCATCCGGTTCAG 58.022 47.619 0.00 0.00 0.00 3.02
2225 4985 1.398390 GTTGTCATCATCCGGTTCAGC 59.602 52.381 0.00 0.00 0.00 4.26
2226 4986 0.904649 TGTCATCATCCGGTTCAGCT 59.095 50.000 0.00 0.00 0.00 4.24
2227 4987 1.134699 TGTCATCATCCGGTTCAGCTC 60.135 52.381 0.00 0.00 0.00 4.09
2228 4988 1.137872 GTCATCATCCGGTTCAGCTCT 59.862 52.381 0.00 0.00 0.00 4.09
2229 4989 2.362397 GTCATCATCCGGTTCAGCTCTA 59.638 50.000 0.00 0.00 0.00 2.43
2230 4990 3.031013 TCATCATCCGGTTCAGCTCTAA 58.969 45.455 0.00 0.00 0.00 2.10
2231 4991 3.643320 TCATCATCCGGTTCAGCTCTAAT 59.357 43.478 0.00 0.00 0.00 1.73
2232 4992 4.832823 TCATCATCCGGTTCAGCTCTAATA 59.167 41.667 0.00 0.00 0.00 0.98
2233 4993 4.585955 TCATCCGGTTCAGCTCTAATAC 57.414 45.455 0.00 0.00 0.00 1.89
2234 4994 3.958147 TCATCCGGTTCAGCTCTAATACA 59.042 43.478 0.00 0.00 0.00 2.29
2235 4995 4.404394 TCATCCGGTTCAGCTCTAATACAA 59.596 41.667 0.00 0.00 0.00 2.41
2236 4996 5.070446 TCATCCGGTTCAGCTCTAATACAAT 59.930 40.000 0.00 0.00 0.00 2.71
2237 4997 4.693283 TCCGGTTCAGCTCTAATACAATG 58.307 43.478 0.00 0.00 0.00 2.82
2238 4998 4.404394 TCCGGTTCAGCTCTAATACAATGA 59.596 41.667 0.00 0.00 0.00 2.57
2239 4999 5.070446 TCCGGTTCAGCTCTAATACAATGAT 59.930 40.000 0.00 0.00 0.00 2.45
2240 5000 6.266786 TCCGGTTCAGCTCTAATACAATGATA 59.733 38.462 0.00 0.00 0.00 2.15
2241 5001 6.366332 CCGGTTCAGCTCTAATACAATGATAC 59.634 42.308 0.00 0.00 0.00 2.24
2242 5002 6.366332 CGGTTCAGCTCTAATACAATGATACC 59.634 42.308 0.00 0.00 0.00 2.73
2243 5003 6.651225 GGTTCAGCTCTAATACAATGATACCC 59.349 42.308 0.00 0.00 0.00 3.69
2244 5004 7.445945 GTTCAGCTCTAATACAATGATACCCT 58.554 38.462 0.00 0.00 0.00 4.34
2245 5005 7.618019 TCAGCTCTAATACAATGATACCCTT 57.382 36.000 0.00 0.00 0.00 3.95
2246 5006 8.721133 TCAGCTCTAATACAATGATACCCTTA 57.279 34.615 0.00 0.00 0.00 2.69
2247 5007 8.585881 TCAGCTCTAATACAATGATACCCTTAC 58.414 37.037 0.00 0.00 0.00 2.34
2248 5008 8.367911 CAGCTCTAATACAATGATACCCTTACA 58.632 37.037 0.00 0.00 0.00 2.41
2249 5009 9.105844 AGCTCTAATACAATGATACCCTTACAT 57.894 33.333 0.00 0.00 0.00 2.29
2272 5032 8.671921 ACATATATTAGAAGGACATACGTACCG 58.328 37.037 0.00 0.00 0.00 4.02
2273 5033 3.698029 TTAGAAGGACATACGTACCGC 57.302 47.619 0.00 0.00 0.00 5.68
2274 5034 1.466856 AGAAGGACATACGTACCGCA 58.533 50.000 0.00 0.00 0.00 5.69
2275 5035 1.820519 AGAAGGACATACGTACCGCAA 59.179 47.619 0.00 0.00 0.00 4.85
2276 5036 2.429610 AGAAGGACATACGTACCGCAAT 59.570 45.455 0.00 0.00 0.00 3.56
2277 5037 2.218953 AGGACATACGTACCGCAATG 57.781 50.000 0.00 0.00 32.38 2.82
2278 5038 1.202486 AGGACATACGTACCGCAATGG 60.202 52.381 0.00 0.00 46.41 3.16
2279 5039 0.580104 GACATACGTACCGCAATGGC 59.420 55.000 0.00 0.00 43.94 4.40
2280 5040 0.177141 ACATACGTACCGCAATGGCT 59.823 50.000 0.00 0.00 43.94 4.75
2281 5041 1.409790 ACATACGTACCGCAATGGCTA 59.590 47.619 0.00 0.00 43.94 3.93
2282 5042 2.058798 CATACGTACCGCAATGGCTAG 58.941 52.381 0.00 0.00 43.94 3.42
2283 5043 1.391577 TACGTACCGCAATGGCTAGA 58.608 50.000 0.00 0.00 43.94 2.43
2284 5044 0.102481 ACGTACCGCAATGGCTAGAG 59.898 55.000 0.00 0.00 43.94 2.43
2285 5045 0.102481 CGTACCGCAATGGCTAGAGT 59.898 55.000 0.00 0.00 43.94 3.24
2286 5046 1.470979 CGTACCGCAATGGCTAGAGTT 60.471 52.381 0.00 0.00 43.94 3.01
2287 5047 1.933853 GTACCGCAATGGCTAGAGTTG 59.066 52.381 0.00 0.00 43.94 3.16
2288 5048 1.026718 ACCGCAATGGCTAGAGTTGC 61.027 55.000 13.81 13.81 43.94 4.17
2289 5049 0.745845 CCGCAATGGCTAGAGTTGCT 60.746 55.000 18.61 0.00 44.44 3.91
2290 5050 0.376152 CGCAATGGCTAGAGTTGCTG 59.624 55.000 18.61 11.79 44.44 4.41
2291 5051 1.457346 GCAATGGCTAGAGTTGCTGT 58.543 50.000 15.59 0.00 43.56 4.40
2292 5052 1.399791 GCAATGGCTAGAGTTGCTGTC 59.600 52.381 15.59 0.00 43.56 3.51
2293 5053 2.938756 GCAATGGCTAGAGTTGCTGTCT 60.939 50.000 15.59 0.00 43.56 3.41
2294 5054 3.341823 CAATGGCTAGAGTTGCTGTCTT 58.658 45.455 0.00 0.00 0.00 3.01
2295 5055 2.751166 TGGCTAGAGTTGCTGTCTTC 57.249 50.000 0.00 0.00 0.00 2.87
2296 5056 1.276421 TGGCTAGAGTTGCTGTCTTCC 59.724 52.381 0.00 0.00 0.00 3.46
2297 5057 1.276421 GGCTAGAGTTGCTGTCTTCCA 59.724 52.381 0.00 0.00 0.00 3.53
2298 5058 2.342179 GCTAGAGTTGCTGTCTTCCAC 58.658 52.381 0.00 0.00 0.00 4.02
2299 5059 2.933056 GCTAGAGTTGCTGTCTTCCACC 60.933 54.545 0.00 0.00 0.00 4.61
2300 5060 0.398318 AGAGTTGCTGTCTTCCACCC 59.602 55.000 0.00 0.00 0.00 4.61
2301 5061 0.606673 GAGTTGCTGTCTTCCACCCC 60.607 60.000 0.00 0.00 0.00 4.95
2302 5062 1.062488 AGTTGCTGTCTTCCACCCCT 61.062 55.000 0.00 0.00 0.00 4.79
2303 5063 0.890996 GTTGCTGTCTTCCACCCCTG 60.891 60.000 0.00 0.00 0.00 4.45
2304 5064 2.067932 TTGCTGTCTTCCACCCCTGG 62.068 60.000 0.00 0.00 39.23 4.45
2305 5065 2.529744 GCTGTCTTCCACCCCTGGT 61.530 63.158 0.00 0.00 38.90 4.00
2306 5066 2.069165 GCTGTCTTCCACCCCTGGTT 62.069 60.000 0.00 0.00 38.90 3.67
2307 5067 0.036875 CTGTCTTCCACCCCTGGTTC 59.963 60.000 0.00 0.00 38.90 3.62
2308 5068 1.003718 GTCTTCCACCCCTGGTTCG 60.004 63.158 0.00 0.00 38.90 3.95
2309 5069 1.152204 TCTTCCACCCCTGGTTCGA 60.152 57.895 0.00 0.00 38.90 3.71
2310 5070 0.546747 TCTTCCACCCCTGGTTCGAT 60.547 55.000 0.00 0.00 38.90 3.59
2311 5071 0.107654 CTTCCACCCCTGGTTCGATC 60.108 60.000 0.00 0.00 38.90 3.69
2312 5072 1.559065 TTCCACCCCTGGTTCGATCC 61.559 60.000 5.52 5.52 38.90 3.36
2313 5073 2.590092 CACCCCTGGTTCGATCCC 59.410 66.667 10.02 2.41 31.02 3.85
2314 5074 3.081409 ACCCCTGGTTCGATCCCG 61.081 66.667 10.02 3.58 27.29 5.14
2315 5075 3.861797 CCCCTGGTTCGATCCCGG 61.862 72.222 14.38 14.38 36.24 5.73
2316 5076 3.861797 CCCTGGTTCGATCCCGGG 61.862 72.222 23.08 23.08 46.57 5.73
2317 5077 3.081409 CCTGGTTCGATCCCGGGT 61.081 66.667 22.86 8.01 42.68 5.28
2318 5078 1.759299 CCTGGTTCGATCCCGGGTA 60.759 63.158 22.86 7.86 42.68 3.69
2319 5079 1.440476 CTGGTTCGATCCCGGGTAC 59.560 63.158 22.86 14.72 36.24 3.34
2320 5080 1.000739 TGGTTCGATCCCGGGTACT 59.999 57.895 22.86 6.52 36.24 2.73
2321 5081 0.258484 TGGTTCGATCCCGGGTACTA 59.742 55.000 22.86 0.00 36.24 1.82
2322 5082 0.670706 GGTTCGATCCCGGGTACTAC 59.329 60.000 22.86 13.09 36.24 2.73
2323 5083 0.670706 GTTCGATCCCGGGTACTACC 59.329 60.000 22.86 2.01 37.60 3.18
2354 5114 8.912787 TTCTCTACTTTTATCTCTTAACAGCG 57.087 34.615 0.00 0.00 0.00 5.18
2355 5115 8.277490 TCTCTACTTTTATCTCTTAACAGCGA 57.723 34.615 0.00 0.00 0.00 4.93
2356 5116 8.399425 TCTCTACTTTTATCTCTTAACAGCGAG 58.601 37.037 0.00 0.00 0.00 5.03
2357 5117 6.973474 TCTACTTTTATCTCTTAACAGCGAGC 59.027 38.462 0.00 0.00 0.00 5.03
2358 5118 4.563184 ACTTTTATCTCTTAACAGCGAGCG 59.437 41.667 0.00 0.00 0.00 5.03
2359 5119 4.365899 TTTATCTCTTAACAGCGAGCGA 57.634 40.909 0.00 0.00 0.00 4.93
2360 5120 2.483583 ATCTCTTAACAGCGAGCGAG 57.516 50.000 0.00 0.00 0.00 5.03
2361 5121 0.179161 TCTCTTAACAGCGAGCGAGC 60.179 55.000 0.00 0.00 37.41 5.03
2362 5122 1.142778 CTCTTAACAGCGAGCGAGCC 61.143 60.000 2.87 0.00 38.01 4.70
2363 5123 1.153745 CTTAACAGCGAGCGAGCCT 60.154 57.895 2.87 0.00 38.01 4.58
2364 5124 1.142778 CTTAACAGCGAGCGAGCCTC 61.143 60.000 2.87 0.00 38.01 4.70
2365 5125 2.558554 TTAACAGCGAGCGAGCCTCC 62.559 60.000 2.87 0.00 37.27 4.30
2367 5127 4.567385 CAGCGAGCGAGCCTCCTC 62.567 72.222 2.87 1.41 37.27 3.71
2378 5138 4.559063 CCTCCTCCGCCCTGCATG 62.559 72.222 0.00 0.00 0.00 4.06
2379 5139 3.790437 CTCCTCCGCCCTGCATGT 61.790 66.667 0.00 0.00 0.00 3.21
2380 5140 4.100084 TCCTCCGCCCTGCATGTG 62.100 66.667 0.00 0.00 0.00 3.21
2381 5141 4.415150 CCTCCGCCCTGCATGTGT 62.415 66.667 0.00 0.00 0.00 3.72
2382 5142 2.360350 CTCCGCCCTGCATGTGTT 60.360 61.111 0.00 0.00 0.00 3.32
2383 5143 2.359850 TCCGCCCTGCATGTGTTC 60.360 61.111 0.00 0.00 0.00 3.18
2384 5144 2.672651 CCGCCCTGCATGTGTTCA 60.673 61.111 0.00 0.00 0.00 3.18
2385 5145 2.048023 CCGCCCTGCATGTGTTCAT 61.048 57.895 0.00 0.00 34.21 2.57
2395 5155 1.180029 ATGTGTTCATGAGCCAAGCC 58.820 50.000 7.13 0.00 32.51 4.35
2396 5156 0.178995 TGTGTTCATGAGCCAAGCCA 60.179 50.000 7.13 0.00 0.00 4.75
2397 5157 1.180029 GTGTTCATGAGCCAAGCCAT 58.820 50.000 7.13 0.00 0.00 4.40
2398 5158 1.135199 GTGTTCATGAGCCAAGCCATG 60.135 52.381 7.13 10.11 38.01 3.66
2399 5159 1.272037 TGTTCATGAGCCAAGCCATGA 60.272 47.619 7.13 13.31 41.06 3.07
2400 5160 1.133790 GTTCATGAGCCAAGCCATGAC 59.866 52.381 15.63 10.14 41.80 3.06
2401 5161 0.328926 TCATGAGCCAAGCCATGACA 59.671 50.000 13.31 0.00 39.42 3.58
2402 5162 0.454600 CATGAGCCAAGCCATGACAC 59.545 55.000 10.62 0.00 38.51 3.67
2403 5163 0.682209 ATGAGCCAAGCCATGACACC 60.682 55.000 0.00 0.00 0.00 4.16
2404 5164 2.036256 AGCCAAGCCATGACACCC 59.964 61.111 0.00 0.00 0.00 4.61
2405 5165 3.070576 GCCAAGCCATGACACCCC 61.071 66.667 0.00 0.00 0.00 4.95
2406 5166 2.362889 CCAAGCCATGACACCCCC 60.363 66.667 0.00 0.00 0.00 5.40
2407 5167 2.765969 CAAGCCATGACACCCCCT 59.234 61.111 0.00 0.00 0.00 4.79
2408 5168 1.077265 CAAGCCATGACACCCCCTT 59.923 57.895 0.00 0.00 0.00 3.95
2409 5169 0.542702 CAAGCCATGACACCCCCTTT 60.543 55.000 0.00 0.00 0.00 3.11
2410 5170 0.190815 AAGCCATGACACCCCCTTTT 59.809 50.000 0.00 0.00 0.00 2.27
2411 5171 0.190815 AGCCATGACACCCCCTTTTT 59.809 50.000 0.00 0.00 0.00 1.94
2412 5172 0.608130 GCCATGACACCCCCTTTTTC 59.392 55.000 0.00 0.00 0.00 2.29
2413 5173 1.827245 GCCATGACACCCCCTTTTTCT 60.827 52.381 0.00 0.00 0.00 2.52
2414 5174 2.608623 CCATGACACCCCCTTTTTCTT 58.391 47.619 0.00 0.00 0.00 2.52
2415 5175 2.972021 CCATGACACCCCCTTTTTCTTT 59.028 45.455 0.00 0.00 0.00 2.52
2416 5176 3.390967 CCATGACACCCCCTTTTTCTTTT 59.609 43.478 0.00 0.00 0.00 2.27
2417 5177 4.503123 CCATGACACCCCCTTTTTCTTTTC 60.503 45.833 0.00 0.00 0.00 2.29
2418 5178 3.989056 TGACACCCCCTTTTTCTTTTCT 58.011 40.909 0.00 0.00 0.00 2.52
2419 5179 4.358214 TGACACCCCCTTTTTCTTTTCTT 58.642 39.130 0.00 0.00 0.00 2.52
2420 5180 5.520751 TGACACCCCCTTTTTCTTTTCTTA 58.479 37.500 0.00 0.00 0.00 2.10
2421 5181 6.140377 TGACACCCCCTTTTTCTTTTCTTAT 58.860 36.000 0.00 0.00 0.00 1.73
2422 5182 6.613679 TGACACCCCCTTTTTCTTTTCTTATT 59.386 34.615 0.00 0.00 0.00 1.40
2423 5183 7.126573 TGACACCCCCTTTTTCTTTTCTTATTT 59.873 33.333 0.00 0.00 0.00 1.40
2424 5184 7.506114 ACACCCCCTTTTTCTTTTCTTATTTC 58.494 34.615 0.00 0.00 0.00 2.17
2425 5185 7.347222 ACACCCCCTTTTTCTTTTCTTATTTCT 59.653 33.333 0.00 0.00 0.00 2.52
2426 5186 7.657354 CACCCCCTTTTTCTTTTCTTATTTCTG 59.343 37.037 0.00 0.00 0.00 3.02
2427 5187 7.347222 ACCCCCTTTTTCTTTTCTTATTTCTGT 59.653 33.333 0.00 0.00 0.00 3.41
2428 5188 8.210946 CCCCCTTTTTCTTTTCTTATTTCTGTT 58.789 33.333 0.00 0.00 0.00 3.16
2429 5189 9.613428 CCCCTTTTTCTTTTCTTATTTCTGTTT 57.387 29.630 0.00 0.00 0.00 2.83
2441 5201 9.635404 TTCTTATTTCTGTTTTTCCTTCTACCA 57.365 29.630 0.00 0.00 0.00 3.25
2442 5202 9.063615 TCTTATTTCTGTTTTTCCTTCTACCAC 57.936 33.333 0.00 0.00 0.00 4.16
2443 5203 8.990163 TTATTTCTGTTTTTCCTTCTACCACT 57.010 30.769 0.00 0.00 0.00 4.00
2444 5204 7.898014 ATTTCTGTTTTTCCTTCTACCACTT 57.102 32.000 0.00 0.00 0.00 3.16
2445 5205 8.990163 ATTTCTGTTTTTCCTTCTACCACTTA 57.010 30.769 0.00 0.00 0.00 2.24
2446 5206 8.810990 TTTCTGTTTTTCCTTCTACCACTTAA 57.189 30.769 0.00 0.00 0.00 1.85
2447 5207 7.797038 TCTGTTTTTCCTTCTACCACTTAAC 57.203 36.000 0.00 0.00 0.00 2.01
2448 5208 7.571025 TCTGTTTTTCCTTCTACCACTTAACT 58.429 34.615 0.00 0.00 0.00 2.24
2449 5209 7.713942 TCTGTTTTTCCTTCTACCACTTAACTC 59.286 37.037 0.00 0.00 0.00 3.01
2450 5210 6.480981 TGTTTTTCCTTCTACCACTTAACTCG 59.519 38.462 0.00 0.00 0.00 4.18
2451 5211 4.796038 TTCCTTCTACCACTTAACTCGG 57.204 45.455 0.00 0.00 0.00 4.63
2452 5212 3.094572 TCCTTCTACCACTTAACTCGGG 58.905 50.000 0.00 0.00 0.00 5.14
2453 5213 3.094572 CCTTCTACCACTTAACTCGGGA 58.905 50.000 0.00 0.00 0.00 5.14
2454 5214 3.705072 CCTTCTACCACTTAACTCGGGAT 59.295 47.826 0.00 0.00 0.00 3.85
2455 5215 4.161754 CCTTCTACCACTTAACTCGGGATT 59.838 45.833 0.00 0.00 0.00 3.01
2456 5216 5.338137 CCTTCTACCACTTAACTCGGGATTT 60.338 44.000 0.00 0.00 0.00 2.17
2457 5217 5.334724 TCTACCACTTAACTCGGGATTTC 57.665 43.478 0.00 0.00 0.00 2.17
2458 5218 3.345508 ACCACTTAACTCGGGATTTCC 57.654 47.619 0.00 0.00 0.00 3.13
2459 5219 2.640826 ACCACTTAACTCGGGATTTCCA 59.359 45.455 0.00 0.00 37.91 3.53
2460 5220 3.073356 ACCACTTAACTCGGGATTTCCAA 59.927 43.478 0.00 0.00 37.91 3.53
2461 5221 4.076394 CCACTTAACTCGGGATTTCCAAA 58.924 43.478 0.00 0.00 37.91 3.28
2462 5222 4.521256 CCACTTAACTCGGGATTTCCAAAA 59.479 41.667 0.00 0.00 37.91 2.44
2463 5223 5.335661 CCACTTAACTCGGGATTTCCAAAAG 60.336 44.000 0.00 0.00 37.91 2.27
2464 5224 5.240844 CACTTAACTCGGGATTTCCAAAAGT 59.759 40.000 0.00 0.00 37.91 2.66
2465 5225 5.831525 ACTTAACTCGGGATTTCCAAAAGTT 59.168 36.000 12.31 12.31 37.35 2.66
2466 5226 4.584327 AACTCGGGATTTCCAAAAGTTG 57.416 40.909 0.00 0.00 34.46 3.16
2467 5227 2.296190 ACTCGGGATTTCCAAAAGTTGC 59.704 45.455 0.00 0.00 37.91 4.17
2468 5228 1.268352 TCGGGATTTCCAAAAGTTGCG 59.732 47.619 0.00 0.00 37.91 4.85
2469 5229 1.268352 CGGGATTTCCAAAAGTTGCGA 59.732 47.619 0.00 0.00 37.91 5.10
2470 5230 2.668279 CGGGATTTCCAAAAGTTGCGAG 60.668 50.000 0.00 0.00 37.91 5.03
2471 5231 2.296190 GGGATTTCCAAAAGTTGCGAGT 59.704 45.455 0.00 0.00 37.91 4.18
2472 5232 3.243737 GGGATTTCCAAAAGTTGCGAGTT 60.244 43.478 0.00 0.00 37.91 3.01
2473 5233 4.368315 GGATTTCCAAAAGTTGCGAGTTT 58.632 39.130 0.51 0.51 35.64 2.66
2474 5234 4.808895 GGATTTCCAAAAGTTGCGAGTTTT 59.191 37.500 12.90 12.90 38.60 2.43
2475 5235 5.051039 GGATTTCCAAAAGTTGCGAGTTTTC 60.051 40.000 15.36 4.99 36.50 2.29
2476 5236 4.442375 TTCCAAAAGTTGCGAGTTTTCA 57.558 36.364 15.36 4.24 36.50 2.69
2477 5237 4.442375 TCCAAAAGTTGCGAGTTTTCAA 57.558 36.364 15.36 5.39 36.50 2.69
2478 5238 5.004922 TCCAAAAGTTGCGAGTTTTCAAT 57.995 34.783 15.36 0.00 36.50 2.57
2479 5239 5.415221 TCCAAAAGTTGCGAGTTTTCAATT 58.585 33.333 15.36 0.00 36.50 2.32
2480 5240 5.872070 TCCAAAAGTTGCGAGTTTTCAATTT 59.128 32.000 15.36 0.00 36.50 1.82
2481 5241 6.370166 TCCAAAAGTTGCGAGTTTTCAATTTT 59.630 30.769 15.36 0.00 36.50 1.82
2482 5242 7.545965 TCCAAAAGTTGCGAGTTTTCAATTTTA 59.454 29.630 15.36 0.00 36.50 1.52
2483 5243 8.334632 CCAAAAGTTGCGAGTTTTCAATTTTAT 58.665 29.630 15.36 0.00 36.50 1.40
2484 5244 9.701355 CAAAAGTTGCGAGTTTTCAATTTTATT 57.299 25.926 15.36 0.00 36.50 1.40
2486 5246 9.701355 AAAGTTGCGAGTTTTCAATTTTATTTG 57.299 25.926 0.51 0.00 32.73 2.32
2487 5247 8.641499 AGTTGCGAGTTTTCAATTTTATTTGA 57.359 26.923 0.00 0.00 33.89 2.69
2488 5248 8.755018 AGTTGCGAGTTTTCAATTTTATTTGAG 58.245 29.630 0.00 0.00 36.97 3.02
2489 5249 8.751335 GTTGCGAGTTTTCAATTTTATTTGAGA 58.249 29.630 0.00 0.00 36.97 3.27
2490 5250 8.864069 TGCGAGTTTTCAATTTTATTTGAGAA 57.136 26.923 0.00 0.00 36.97 2.87
2491 5251 9.307121 TGCGAGTTTTCAATTTTATTTGAGAAA 57.693 25.926 0.00 0.00 36.97 2.52
2543 5303 9.790344 AATGTTTGGAAAATCATAAAATGTCCA 57.210 25.926 0.00 0.00 31.94 4.02
2544 5304 8.830201 TGTTTGGAAAATCATAAAATGTCCAG 57.170 30.769 0.00 0.00 35.24 3.86
2545 5305 8.428063 TGTTTGGAAAATCATAAAATGTCCAGT 58.572 29.630 0.00 0.00 35.24 4.00
2546 5306 9.921637 GTTTGGAAAATCATAAAATGTCCAGTA 57.078 29.630 0.00 0.00 35.24 2.74
2576 5336 6.651755 AAAACTGTTTGCATTGTTTCTGAG 57.348 33.333 6.53 0.00 32.35 3.35
2577 5337 5.581126 AACTGTTTGCATTGTTTCTGAGA 57.419 34.783 0.00 0.00 0.00 3.27
2578 5338 5.581126 ACTGTTTGCATTGTTTCTGAGAA 57.419 34.783 0.00 0.00 0.00 2.87
2579 5339 5.964758 ACTGTTTGCATTGTTTCTGAGAAA 58.035 33.333 3.02 3.02 0.00 2.52
2580 5340 6.576185 ACTGTTTGCATTGTTTCTGAGAAAT 58.424 32.000 11.20 0.00 0.00 2.17
2581 5341 6.698766 ACTGTTTGCATTGTTTCTGAGAAATC 59.301 34.615 11.20 5.84 0.00 2.17
2582 5342 6.571605 TGTTTGCATTGTTTCTGAGAAATCA 58.428 32.000 11.20 8.27 0.00 2.57
2583 5343 7.211573 TGTTTGCATTGTTTCTGAGAAATCAT 58.788 30.769 11.20 3.69 0.00 2.45
2584 5344 8.358895 TGTTTGCATTGTTTCTGAGAAATCATA 58.641 29.630 11.20 0.00 0.00 2.15
2585 5345 9.195411 GTTTGCATTGTTTCTGAGAAATCATAA 57.805 29.630 11.20 5.35 0.00 1.90
2586 5346 9.761504 TTTGCATTGTTTCTGAGAAATCATAAA 57.238 25.926 11.20 6.06 0.00 1.40
2587 5347 9.761504 TTGCATTGTTTCTGAGAAATCATAAAA 57.238 25.926 11.20 0.69 0.00 1.52
2588 5348 9.932207 TGCATTGTTTCTGAGAAATCATAAAAT 57.068 25.926 11.20 2.87 0.00 1.82
2632 5392 9.829507 TGTTTGGAAAATCATAAAATGTTCAGT 57.170 25.926 0.00 0.00 0.00 3.41
2696 5456 7.623268 AAAAATGTTCGCAGAAAACATACTC 57.377 32.000 2.24 0.00 44.44 2.59
2697 5457 5.940192 AATGTTCGCAGAAAACATACTCA 57.060 34.783 2.24 0.00 44.44 3.41
2698 5458 6.500684 AATGTTCGCAGAAAACATACTCAT 57.499 33.333 2.24 0.00 44.44 2.90
2699 5459 5.281693 TGTTCGCAGAAAACATACTCATG 57.718 39.130 0.00 0.00 45.90 3.07
2700 5460 4.994217 TGTTCGCAGAAAACATACTCATGA 59.006 37.500 0.00 0.00 45.90 3.07
2701 5461 5.643348 TGTTCGCAGAAAACATACTCATGAT 59.357 36.000 0.00 0.00 45.90 2.45
2702 5462 6.149308 TGTTCGCAGAAAACATACTCATGATT 59.851 34.615 0.00 0.00 45.90 2.57
2703 5463 6.741992 TCGCAGAAAACATACTCATGATTT 57.258 33.333 0.00 0.00 39.17 2.17
2704 5464 7.144722 TCGCAGAAAACATACTCATGATTTT 57.855 32.000 0.00 0.00 37.30 1.82
2705 5465 8.262715 TCGCAGAAAACATACTCATGATTTTA 57.737 30.769 0.00 0.00 37.30 1.52
2706 5466 8.390354 TCGCAGAAAACATACTCATGATTTTAG 58.610 33.333 0.00 0.00 37.30 1.85
2707 5467 8.390354 CGCAGAAAACATACTCATGATTTTAGA 58.610 33.333 0.00 0.00 37.30 2.10
2750 5510 9.846248 AACAGATCTGTAAATAATGAACAAAGC 57.154 29.630 28.10 0.00 44.13 3.51
2751 5511 9.236006 ACAGATCTGTAAATAATGAACAAAGCT 57.764 29.630 26.87 0.00 42.90 3.74
2756 5516 8.447833 TCTGTAAATAATGAACAAAGCTAACCG 58.552 33.333 0.00 0.00 0.00 4.44
2757 5517 7.531716 TGTAAATAATGAACAAAGCTAACCGG 58.468 34.615 0.00 0.00 0.00 5.28
2758 5518 4.632538 ATAATGAACAAAGCTAACCGGC 57.367 40.909 0.00 0.00 0.00 6.13
2759 5519 2.200373 ATGAACAAAGCTAACCGGCT 57.800 45.000 0.00 0.00 45.30 5.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 3.763897 GCAGTTCATATGTTTCCAAGGGT 59.236 43.478 1.90 0.00 0.00 4.34
53 54 6.968904 CACTTGCCACTAAACTGCATAATTAG 59.031 38.462 10.20 10.20 34.51 1.73
62 63 5.455392 CATTTCTCACTTGCCACTAAACTG 58.545 41.667 0.00 0.00 0.00 3.16
74 75 0.953727 TTGCAGCGCATTTCTCACTT 59.046 45.000 11.47 0.00 38.76 3.16
106 107 6.186957 TGGTCAATAAACAGCAGATAACCAT 58.813 36.000 0.00 0.00 0.00 3.55
123 124 6.435277 ACAAACAGCTCTCATATTTGGTCAAT 59.565 34.615 0.00 0.00 35.12 2.57
168 178 5.634020 ACAAGCGTACTACTTCAATTCTCAC 59.366 40.000 0.00 0.00 0.00 3.51
186 197 9.607285 AAAGTATTAGATTTTGTAACACAAGCG 57.393 29.630 0.00 0.00 39.53 4.68
364 388 9.667107 CTGTCATAAACTTTAATCTACCCTCAA 57.333 33.333 0.00 0.00 0.00 3.02
365 389 8.822805 ACTGTCATAAACTTTAATCTACCCTCA 58.177 33.333 0.00 0.00 0.00 3.86
407 2893 4.729868 AGTTCAGCTGATGGGTAAAAGTT 58.270 39.130 19.04 0.00 0.00 2.66
408 2894 4.373156 AGTTCAGCTGATGGGTAAAAGT 57.627 40.909 19.04 0.00 0.00 2.66
468 2965 7.951530 AAAATTGAAAATGTGCTCCTGTAAG 57.048 32.000 0.00 0.00 0.00 2.34
492 2989 9.653287 TCTCTCTCTCTTTTATTGCGAATAAAA 57.347 29.630 17.84 17.84 45.88 1.52
496 2993 9.421806 CATATCTCTCTCTCTTTTATTGCGAAT 57.578 33.333 0.00 0.00 0.00 3.34
497 2994 7.869937 CCATATCTCTCTCTCTTTTATTGCGAA 59.130 37.037 0.00 0.00 0.00 4.70
498 2995 7.231519 TCCATATCTCTCTCTCTTTTATTGCGA 59.768 37.037 0.00 0.00 0.00 5.10
499 2996 7.374272 TCCATATCTCTCTCTCTTTTATTGCG 58.626 38.462 0.00 0.00 0.00 4.85
500 2997 9.153721 CATCCATATCTCTCTCTCTTTTATTGC 57.846 37.037 0.00 0.00 0.00 3.56
501 2998 9.153721 GCATCCATATCTCTCTCTCTTTTATTG 57.846 37.037 0.00 0.00 0.00 1.90
502 2999 9.103582 AGCATCCATATCTCTCTCTCTTTTATT 57.896 33.333 0.00 0.00 0.00 1.40
503 3000 8.669055 AGCATCCATATCTCTCTCTCTTTTAT 57.331 34.615 0.00 0.00 0.00 1.40
504 3001 7.949565 AGAGCATCCATATCTCTCTCTCTTTTA 59.050 37.037 0.00 0.00 32.11 1.52
505 3002 6.783977 AGAGCATCCATATCTCTCTCTCTTTT 59.216 38.462 0.00 0.00 32.11 2.27
506 3003 6.209986 CAGAGCATCCATATCTCTCTCTCTTT 59.790 42.308 0.00 0.00 35.19 2.52
507 3004 5.713389 CAGAGCATCCATATCTCTCTCTCTT 59.287 44.000 0.00 0.00 35.19 2.85
511 3008 3.765511 AGCAGAGCATCCATATCTCTCTC 59.234 47.826 0.00 0.00 35.19 3.20
532 3030 1.160137 CCTGTTTCCGCTCCTTTCAG 58.840 55.000 0.00 0.00 0.00 3.02
550 3048 5.488341 TGGAGCACTCAGTAAAGTTATTCC 58.512 41.667 0.00 0.00 0.00 3.01
590 3094 9.436957 AAAGAGTATGTGATAATTCGACAACTT 57.563 29.630 0.00 0.00 0.00 2.66
651 3186 3.191078 AGATTCTAGGCTGACATGCAC 57.809 47.619 0.00 0.00 34.04 4.57
670 3259 7.099764 CCCAGCTACCAACAGATGTTATATAG 58.900 42.308 0.00 2.63 36.32 1.31
685 3274 0.184933 AGTTTTGCACCCAGCTACCA 59.815 50.000 0.00 0.00 45.94 3.25
688 3277 3.326588 TCTCTAAGTTTTGCACCCAGCTA 59.673 43.478 0.00 0.00 45.94 3.32
745 3334 6.183360 CGGCAGAGAAATTTTGTGAAAACAAA 60.183 34.615 0.04 0.04 37.77 2.83
746 3335 5.290643 CGGCAGAGAAATTTTGTGAAAACAA 59.709 36.000 0.00 0.00 32.37 2.83
747 3336 4.803088 CGGCAGAGAAATTTTGTGAAAACA 59.197 37.500 0.00 0.00 32.37 2.83
748 3337 5.040635 TCGGCAGAGAAATTTTGTGAAAAC 58.959 37.500 0.00 0.00 32.37 2.43
749 3338 5.255710 TCGGCAGAGAAATTTTGTGAAAA 57.744 34.783 0.00 0.00 34.41 2.29
750 3339 4.909696 TCGGCAGAGAAATTTTGTGAAA 57.090 36.364 0.00 0.00 0.00 2.69
755 3344 7.787832 GTCGACACTCGGCAGAGAAATTTTG 62.788 48.000 21.22 9.39 45.01 2.44
767 3356 1.058404 GTTACTTGTCGACACTCGGC 58.942 55.000 19.90 5.31 46.01 5.54
778 3367 4.713824 TGCGAGTATAGCTGTTACTTGT 57.286 40.909 19.38 0.45 37.72 3.16
785 3374 4.500545 CCATTCTCTTGCGAGTATAGCTGT 60.501 45.833 0.00 0.00 37.72 4.40
794 3395 1.159285 TTGCACCATTCTCTTGCGAG 58.841 50.000 0.00 0.00 39.22 5.03
806 3408 5.645056 TGATTCCCTCTATTATTGCACCA 57.355 39.130 0.00 0.00 0.00 4.17
836 3438 2.592287 GGTTTGGCGGACGTGGAA 60.592 61.111 0.00 0.00 0.00 3.53
839 3444 2.280524 TGAGGTTTGGCGGACGTG 60.281 61.111 0.00 0.00 0.00 4.49
840 3445 2.280592 GTGAGGTTTGGCGGACGT 60.281 61.111 0.00 0.00 0.00 4.34
841 3446 3.047877 GGTGAGGTTTGGCGGACG 61.048 66.667 0.00 0.00 0.00 4.79
843 3448 3.524648 GACGGTGAGGTTTGGCGGA 62.525 63.158 0.00 0.00 0.00 5.54
844 3449 3.047877 GACGGTGAGGTTTGGCGG 61.048 66.667 0.00 0.00 0.00 6.13
846 3451 1.303317 ATGGACGGTGAGGTTTGGC 60.303 57.895 0.00 0.00 0.00 4.52
851 3456 1.187087 GAGAAGATGGACGGTGAGGT 58.813 55.000 0.00 0.00 0.00 3.85
879 3490 0.179132 TTTATAGCGCGGCGAGTGAA 60.179 50.000 28.54 11.17 0.00 3.18
889 3500 3.006537 TGAGGAGGGTGTATTTATAGCGC 59.993 47.826 0.00 0.00 0.00 5.92
992 3635 1.413077 AGTAGGCCGCCATTCTAAGAC 59.587 52.381 13.15 0.00 0.00 3.01
1088 3739 1.962822 TCGTAGCAGTCGTCGGTGT 60.963 57.895 0.00 0.00 0.00 4.16
1190 3883 3.672295 CTGCCGGAGTCCTGGAAGC 62.672 68.421 20.17 10.16 41.53 3.86
1192 3885 3.003173 CCTGCCGGAGTCCTGGAA 61.003 66.667 20.17 11.33 41.53 3.53
1195 3888 4.767255 GTGCCTGCCGGAGTCCTG 62.767 72.222 5.05 1.09 0.00 3.86
1371 4094 4.346889 TACCCCTGCCCCTGCTCA 62.347 66.667 0.00 0.00 38.71 4.26
1398 4121 0.761187 TCTTGTGCTGCTTCACCTCT 59.239 50.000 0.00 0.00 36.17 3.69
1488 4223 5.139435 TGTGATGTTGTTTTGTTGGTGAA 57.861 34.783 0.00 0.00 0.00 3.18
1886 4646 5.390673 GCATGCAGCTAGCTTATTGTAGATG 60.391 44.000 16.46 9.13 45.94 2.90
1919 4679 1.006102 AGCACGTGACTGGTAGCAC 60.006 57.895 22.23 0.00 0.00 4.40
1956 4716 1.745087 TCTCGACCCGTATTGTACCAC 59.255 52.381 0.00 0.00 0.00 4.16
1969 4729 2.107178 CACGCGTAAATACTCTCGACC 58.893 52.381 13.44 0.00 0.00 4.79
1975 4735 5.611844 GCAATCCATACACGCGTAAATACTC 60.612 44.000 13.44 0.00 0.00 2.59
2083 4843 9.495382 TTTGCAATAACCCCTTTATTATTAGGT 57.505 29.630 0.00 0.00 38.17 3.08
2088 4848 9.830975 GTTGATTTGCAATAACCCCTTTATTAT 57.169 29.630 0.00 0.00 38.17 1.28
2089 4849 8.261522 GGTTGATTTGCAATAACCCCTTTATTA 58.738 33.333 21.23 0.00 38.17 0.98
2090 4850 7.037658 AGGTTGATTTGCAATAACCCCTTTATT 60.038 33.333 25.12 11.24 42.71 1.40
2091 4851 6.443527 AGGTTGATTTGCAATAACCCCTTTAT 59.556 34.615 25.12 11.73 42.71 1.40
2092 4852 5.782845 AGGTTGATTTGCAATAACCCCTTTA 59.217 36.000 25.12 0.85 42.71 1.85
2093 4853 4.597075 AGGTTGATTTGCAATAACCCCTTT 59.403 37.500 25.12 12.48 42.71 3.11
2094 4854 4.020307 CAGGTTGATTTGCAATAACCCCTT 60.020 41.667 25.12 12.73 42.71 3.95
2095 4855 3.515104 CAGGTTGATTTGCAATAACCCCT 59.485 43.478 25.12 15.48 42.71 4.79
2096 4856 3.260632 ACAGGTTGATTTGCAATAACCCC 59.739 43.478 25.12 13.92 42.71 4.95
2097 4857 4.244862 CACAGGTTGATTTGCAATAACCC 58.755 43.478 25.12 13.09 42.71 4.11
2098 4858 3.679502 GCACAGGTTGATTTGCAATAACC 59.320 43.478 23.02 23.02 42.19 2.85
2099 4859 4.559153 AGCACAGGTTGATTTGCAATAAC 58.441 39.130 0.00 6.58 39.03 1.89
2100 4860 4.870123 AGCACAGGTTGATTTGCAATAA 57.130 36.364 0.00 0.00 39.03 1.40
2101 4861 4.280425 TCAAGCACAGGTTGATTTGCAATA 59.720 37.500 0.00 0.00 43.62 1.90
2102 4862 3.069872 TCAAGCACAGGTTGATTTGCAAT 59.930 39.130 0.00 0.00 43.62 3.56
2103 4863 2.429971 TCAAGCACAGGTTGATTTGCAA 59.570 40.909 7.47 0.00 43.62 4.08
2104 4864 2.030371 TCAAGCACAGGTTGATTTGCA 58.970 42.857 7.47 0.00 43.62 4.08
2105 4865 2.294233 TCTCAAGCACAGGTTGATTTGC 59.706 45.455 11.46 0.00 46.49 3.68
2106 4866 4.482386 CATCTCAAGCACAGGTTGATTTG 58.518 43.478 11.46 8.75 46.49 2.32
2107 4867 3.508793 CCATCTCAAGCACAGGTTGATTT 59.491 43.478 11.46 1.17 46.49 2.17
2108 4868 3.087031 CCATCTCAAGCACAGGTTGATT 58.913 45.455 11.46 1.48 46.49 2.57
2109 4869 2.040813 ACCATCTCAAGCACAGGTTGAT 59.959 45.455 11.46 0.00 46.49 2.57
2110 4870 1.421268 ACCATCTCAAGCACAGGTTGA 59.579 47.619 10.70 10.70 45.75 3.18
2111 4871 1.901591 ACCATCTCAAGCACAGGTTG 58.098 50.000 2.74 2.74 41.65 3.77
2112 4872 2.664402 AACCATCTCAAGCACAGGTT 57.336 45.000 0.00 0.00 34.72 3.50
2113 4873 2.026822 CCTAACCATCTCAAGCACAGGT 60.027 50.000 0.00 0.00 0.00 4.00
2114 4874 2.026822 ACCTAACCATCTCAAGCACAGG 60.027 50.000 0.00 0.00 0.00 4.00
2115 4875 3.005554 CACCTAACCATCTCAAGCACAG 58.994 50.000 0.00 0.00 0.00 3.66
2116 4876 2.290260 CCACCTAACCATCTCAAGCACA 60.290 50.000 0.00 0.00 0.00 4.57
2117 4877 2.027192 TCCACCTAACCATCTCAAGCAC 60.027 50.000 0.00 0.00 0.00 4.40
2118 4878 2.027192 GTCCACCTAACCATCTCAAGCA 60.027 50.000 0.00 0.00 0.00 3.91
2119 4879 2.027192 TGTCCACCTAACCATCTCAAGC 60.027 50.000 0.00 0.00 0.00 4.01
2120 4880 3.261897 ACTGTCCACCTAACCATCTCAAG 59.738 47.826 0.00 0.00 0.00 3.02
2121 4881 3.007940 CACTGTCCACCTAACCATCTCAA 59.992 47.826 0.00 0.00 0.00 3.02
2122 4882 2.567169 CACTGTCCACCTAACCATCTCA 59.433 50.000 0.00 0.00 0.00 3.27
2123 4883 2.093447 CCACTGTCCACCTAACCATCTC 60.093 54.545 0.00 0.00 0.00 2.75
2124 4884 1.909302 CCACTGTCCACCTAACCATCT 59.091 52.381 0.00 0.00 0.00 2.90
2125 4885 1.628846 ACCACTGTCCACCTAACCATC 59.371 52.381 0.00 0.00 0.00 3.51
2126 4886 1.742308 ACCACTGTCCACCTAACCAT 58.258 50.000 0.00 0.00 0.00 3.55
2127 4887 2.402182 TACCACTGTCCACCTAACCA 57.598 50.000 0.00 0.00 0.00 3.67
2128 4888 3.105283 AGATACCACTGTCCACCTAACC 58.895 50.000 0.00 0.00 0.00 2.85
2129 4889 3.132467 GGAGATACCACTGTCCACCTAAC 59.868 52.174 0.00 0.00 38.79 2.34
2130 4890 3.245839 TGGAGATACCACTGTCCACCTAA 60.246 47.826 0.00 0.00 44.64 2.69
2131 4891 2.313643 TGGAGATACCACTGTCCACCTA 59.686 50.000 0.00 0.00 44.64 3.08
2132 4892 1.078823 TGGAGATACCACTGTCCACCT 59.921 52.381 0.00 0.00 44.64 4.00
2133 4893 1.568504 TGGAGATACCACTGTCCACC 58.431 55.000 0.00 0.00 44.64 4.61
2143 4903 3.041946 ACCCTGATGAGTTGGAGATACC 58.958 50.000 0.00 0.00 39.54 2.73
2144 4904 4.162320 TGAACCCTGATGAGTTGGAGATAC 59.838 45.833 0.00 0.00 0.00 2.24
2145 4905 4.361783 TGAACCCTGATGAGTTGGAGATA 58.638 43.478 0.00 0.00 0.00 1.98
2146 4906 3.184628 TGAACCCTGATGAGTTGGAGAT 58.815 45.455 0.00 0.00 0.00 2.75
2147 4907 2.619931 TGAACCCTGATGAGTTGGAGA 58.380 47.619 0.00 0.00 0.00 3.71
2148 4908 3.423539 TTGAACCCTGATGAGTTGGAG 57.576 47.619 0.00 0.00 0.00 3.86
2149 4909 3.874383 TTTGAACCCTGATGAGTTGGA 57.126 42.857 0.00 0.00 0.00 3.53
2150 4910 3.445096 GGATTTGAACCCTGATGAGTTGG 59.555 47.826 0.00 0.00 0.00 3.77
2151 4911 4.338879 AGGATTTGAACCCTGATGAGTTG 58.661 43.478 0.00 0.00 0.00 3.16
2152 4912 4.664688 AGGATTTGAACCCTGATGAGTT 57.335 40.909 0.00 0.00 0.00 3.01
2153 4913 7.793327 CACCAGGATTTGAACCCTGATGAGT 62.793 48.000 5.67 0.00 45.07 3.41
2154 4914 5.405202 CACCAGGATTTGAACCCTGATGAG 61.405 50.000 5.67 0.00 45.07 2.90
2155 4915 3.561960 CACCAGGATTTGAACCCTGATGA 60.562 47.826 5.67 0.00 45.07 2.92
2160 4920 0.779997 AGCACCAGGATTTGAACCCT 59.220 50.000 0.00 0.00 0.00 4.34
2161 4921 1.177401 GAGCACCAGGATTTGAACCC 58.823 55.000 0.00 0.00 0.00 4.11
2162 4922 0.804989 CGAGCACCAGGATTTGAACC 59.195 55.000 0.00 0.00 0.00 3.62
2163 4923 1.808411 TCGAGCACCAGGATTTGAAC 58.192 50.000 0.00 0.00 0.00 3.18
2164 4924 2.552315 GTTTCGAGCACCAGGATTTGAA 59.448 45.455 0.00 0.00 0.00 2.69
2165 4925 2.151202 GTTTCGAGCACCAGGATTTGA 58.849 47.619 0.00 0.00 0.00 2.69
2166 4926 1.135972 CGTTTCGAGCACCAGGATTTG 60.136 52.381 0.00 0.00 0.00 2.32
2167 4927 1.156736 CGTTTCGAGCACCAGGATTT 58.843 50.000 0.00 0.00 0.00 2.17
2168 4928 0.320374 TCGTTTCGAGCACCAGGATT 59.680 50.000 0.00 0.00 0.00 3.01
2169 4929 0.537188 ATCGTTTCGAGCACCAGGAT 59.463 50.000 0.00 0.00 39.91 3.24
2170 4930 0.320374 AATCGTTTCGAGCACCAGGA 59.680 50.000 0.00 0.00 39.91 3.86
2171 4931 0.721718 GAATCGTTTCGAGCACCAGG 59.278 55.000 0.00 0.00 39.91 4.45
2172 4932 1.428448 TGAATCGTTTCGAGCACCAG 58.572 50.000 2.00 0.00 39.91 4.00
2173 4933 2.093306 ATGAATCGTTTCGAGCACCA 57.907 45.000 2.00 0.00 39.91 4.17
2174 4934 3.471495 AAATGAATCGTTTCGAGCACC 57.529 42.857 0.00 0.00 39.91 5.01
2196 4956 5.068460 ACCGGATGATGACAACTTTGAAAAA 59.932 36.000 9.46 0.00 0.00 1.94
2197 4957 4.582656 ACCGGATGATGACAACTTTGAAAA 59.417 37.500 9.46 0.00 0.00 2.29
2198 4958 4.141287 ACCGGATGATGACAACTTTGAAA 58.859 39.130 9.46 0.00 0.00 2.69
2199 4959 3.750371 ACCGGATGATGACAACTTTGAA 58.250 40.909 9.46 0.00 0.00 2.69
2200 4960 3.417069 ACCGGATGATGACAACTTTGA 57.583 42.857 9.46 0.00 0.00 2.69
2201 4961 3.501828 TGAACCGGATGATGACAACTTTG 59.498 43.478 9.46 0.00 0.00 2.77
2202 4962 3.750371 TGAACCGGATGATGACAACTTT 58.250 40.909 9.46 0.00 0.00 2.66
2203 4963 3.338249 CTGAACCGGATGATGACAACTT 58.662 45.455 9.46 0.00 0.00 2.66
2204 4964 2.936993 GCTGAACCGGATGATGACAACT 60.937 50.000 9.46 0.00 0.00 3.16
2205 4965 1.398390 GCTGAACCGGATGATGACAAC 59.602 52.381 9.46 0.00 0.00 3.32
2206 4966 1.278985 AGCTGAACCGGATGATGACAA 59.721 47.619 9.46 0.00 0.00 3.18
2207 4967 0.904649 AGCTGAACCGGATGATGACA 59.095 50.000 9.46 0.00 0.00 3.58
2208 4968 1.137872 AGAGCTGAACCGGATGATGAC 59.862 52.381 9.46 0.00 0.00 3.06
2209 4969 1.489481 AGAGCTGAACCGGATGATGA 58.511 50.000 9.46 0.00 0.00 2.92
2210 4970 3.459232 TTAGAGCTGAACCGGATGATG 57.541 47.619 9.46 0.00 0.00 3.07
2211 4971 4.588951 TGTATTAGAGCTGAACCGGATGAT 59.411 41.667 9.46 0.00 0.00 2.45
2212 4972 3.958147 TGTATTAGAGCTGAACCGGATGA 59.042 43.478 9.46 0.00 0.00 2.92
2213 4973 4.322080 TGTATTAGAGCTGAACCGGATG 57.678 45.455 9.46 0.00 0.00 3.51
2214 4974 5.070446 TCATTGTATTAGAGCTGAACCGGAT 59.930 40.000 9.46 0.00 0.00 4.18
2215 4975 4.404394 TCATTGTATTAGAGCTGAACCGGA 59.596 41.667 9.46 0.00 0.00 5.14
2216 4976 4.693283 TCATTGTATTAGAGCTGAACCGG 58.307 43.478 0.00 0.00 0.00 5.28
2217 4977 6.366332 GGTATCATTGTATTAGAGCTGAACCG 59.634 42.308 0.00 0.00 0.00 4.44
2218 4978 6.651225 GGGTATCATTGTATTAGAGCTGAACC 59.349 42.308 0.00 0.00 0.00 3.62
2219 4979 7.445945 AGGGTATCATTGTATTAGAGCTGAAC 58.554 38.462 0.00 0.00 0.00 3.18
2220 4980 7.618019 AGGGTATCATTGTATTAGAGCTGAA 57.382 36.000 0.00 0.00 0.00 3.02
2221 4981 7.618019 AAGGGTATCATTGTATTAGAGCTGA 57.382 36.000 0.00 0.00 0.00 4.26
2222 4982 8.367911 TGTAAGGGTATCATTGTATTAGAGCTG 58.632 37.037 0.00 0.00 0.00 4.24
2223 4983 8.492415 TGTAAGGGTATCATTGTATTAGAGCT 57.508 34.615 0.00 0.00 0.00 4.09
2267 5027 1.933853 CAACTCTAGCCATTGCGGTAC 59.066 52.381 0.00 0.00 44.33 3.34
2268 5028 1.742411 GCAACTCTAGCCATTGCGGTA 60.742 52.381 8.92 0.00 44.33 4.02
2269 5029 1.026718 GCAACTCTAGCCATTGCGGT 61.027 55.000 8.92 0.00 44.33 5.68
2270 5030 1.723870 GCAACTCTAGCCATTGCGG 59.276 57.895 8.92 0.00 44.33 5.69
2273 5033 2.983229 AGACAGCAACTCTAGCCATTG 58.017 47.619 0.00 0.00 0.00 2.82
2274 5034 3.604582 GAAGACAGCAACTCTAGCCATT 58.395 45.455 0.00 0.00 0.00 3.16
2275 5035 2.093235 GGAAGACAGCAACTCTAGCCAT 60.093 50.000 0.00 0.00 0.00 4.40
2276 5036 1.276421 GGAAGACAGCAACTCTAGCCA 59.724 52.381 0.00 0.00 0.00 4.75
2277 5037 1.276421 TGGAAGACAGCAACTCTAGCC 59.724 52.381 0.00 0.00 0.00 3.93
2278 5038 2.342179 GTGGAAGACAGCAACTCTAGC 58.658 52.381 0.00 0.00 0.00 3.42
2279 5039 2.966050 GGTGGAAGACAGCAACTCTAG 58.034 52.381 0.00 0.00 46.64 2.43
2287 5047 2.069165 AACCAGGGGTGGAAGACAGC 62.069 60.000 0.00 0.00 46.68 4.40
2288 5048 0.036875 GAACCAGGGGTGGAAGACAG 59.963 60.000 0.00 0.00 35.34 3.51
2289 5049 1.764571 CGAACCAGGGGTGGAAGACA 61.765 60.000 0.00 0.00 35.34 3.41
2290 5050 1.003718 CGAACCAGGGGTGGAAGAC 60.004 63.158 0.00 0.00 35.34 3.01
2291 5051 0.546747 ATCGAACCAGGGGTGGAAGA 60.547 55.000 0.00 0.00 35.34 2.87
2292 5052 0.107654 GATCGAACCAGGGGTGGAAG 60.108 60.000 0.00 0.00 35.34 3.46
2293 5053 1.559065 GGATCGAACCAGGGGTGGAA 61.559 60.000 6.88 0.00 35.34 3.53
2294 5054 1.993391 GGATCGAACCAGGGGTGGA 60.993 63.158 6.88 0.00 35.34 4.02
2295 5055 2.590092 GGATCGAACCAGGGGTGG 59.410 66.667 6.88 0.00 35.34 4.61
2296 5056 2.590092 GGGATCGAACCAGGGGTG 59.410 66.667 14.28 0.00 35.34 4.61
2297 5057 3.081409 CGGGATCGAACCAGGGGT 61.081 66.667 14.28 0.00 39.00 4.95
2298 5058 3.861797 CCGGGATCGAACCAGGGG 61.862 72.222 20.94 11.35 40.65 4.79
2300 5060 1.759299 TACCCGGGATCGAACCAGG 60.759 63.158 32.02 21.59 43.23 4.45
2301 5061 1.041447 AGTACCCGGGATCGAACCAG 61.041 60.000 32.02 9.54 39.00 4.00
2302 5062 0.258484 TAGTACCCGGGATCGAACCA 59.742 55.000 32.02 3.01 39.00 3.67
2303 5063 0.670706 GTAGTACCCGGGATCGAACC 59.329 60.000 32.02 2.47 39.00 3.62
2304 5064 0.670706 GGTAGTACCCGGGATCGAAC 59.329 60.000 32.02 20.11 39.00 3.95
2305 5065 3.116091 GGTAGTACCCGGGATCGAA 57.884 57.895 32.02 10.28 39.00 3.71
2306 5066 4.907457 GGTAGTACCCGGGATCGA 57.093 61.111 32.02 12.96 39.00 3.59
2328 5088 9.355215 CGCTGTTAAGAGATAAAAGTAGAGAAA 57.645 33.333 3.33 0.00 32.22 2.52
2329 5089 8.737175 TCGCTGTTAAGAGATAAAAGTAGAGAA 58.263 33.333 3.33 0.00 32.22 2.87
2330 5090 8.277490 TCGCTGTTAAGAGATAAAAGTAGAGA 57.723 34.615 3.33 0.00 32.22 3.10
2331 5091 7.166804 GCTCGCTGTTAAGAGATAAAAGTAGAG 59.833 40.741 3.33 0.00 37.99 2.43
2332 5092 6.973474 GCTCGCTGTTAAGAGATAAAAGTAGA 59.027 38.462 3.33 0.00 36.65 2.59
2333 5093 6.075310 CGCTCGCTGTTAAGAGATAAAAGTAG 60.075 42.308 3.33 0.00 36.65 2.57
2334 5094 5.742453 CGCTCGCTGTTAAGAGATAAAAGTA 59.258 40.000 3.33 0.00 36.65 2.24
2335 5095 4.563184 CGCTCGCTGTTAAGAGATAAAAGT 59.437 41.667 3.33 0.00 36.65 2.66
2336 5096 4.798907 TCGCTCGCTGTTAAGAGATAAAAG 59.201 41.667 3.33 0.00 36.65 2.27
2337 5097 4.740268 TCGCTCGCTGTTAAGAGATAAAA 58.260 39.130 3.33 0.00 36.65 1.52
2338 5098 4.352039 CTCGCTCGCTGTTAAGAGATAAA 58.648 43.478 3.33 0.00 36.65 1.40
2339 5099 3.792459 GCTCGCTCGCTGTTAAGAGATAA 60.792 47.826 3.33 0.00 36.65 1.75
2340 5100 2.287069 GCTCGCTCGCTGTTAAGAGATA 60.287 50.000 3.33 0.00 36.65 1.98
2341 5101 1.535015 GCTCGCTCGCTGTTAAGAGAT 60.535 52.381 3.33 0.00 36.65 2.75
2342 5102 0.179161 GCTCGCTCGCTGTTAAGAGA 60.179 55.000 3.33 0.00 36.65 3.10
2343 5103 1.142778 GGCTCGCTCGCTGTTAAGAG 61.143 60.000 0.00 0.00 37.54 2.85
2344 5104 1.153823 GGCTCGCTCGCTGTTAAGA 60.154 57.895 0.00 0.00 0.00 2.10
2345 5105 1.142778 GAGGCTCGCTCGCTGTTAAG 61.143 60.000 0.00 0.00 0.00 1.85
2346 5106 1.153823 GAGGCTCGCTCGCTGTTAA 60.154 57.895 0.00 0.00 0.00 2.01
2347 5107 2.490217 GAGGCTCGCTCGCTGTTA 59.510 61.111 0.00 0.00 0.00 2.41
2348 5108 4.443266 GGAGGCTCGCTCGCTGTT 62.443 66.667 8.69 0.00 0.00 3.16
2350 5110 4.567385 GAGGAGGCTCGCTCGCTG 62.567 72.222 8.69 0.00 0.00 5.18
2361 5121 4.559063 CATGCAGGGCGGAGGAGG 62.559 72.222 0.00 0.00 0.00 4.30
2362 5122 3.790437 ACATGCAGGGCGGAGGAG 61.790 66.667 2.31 0.00 0.00 3.69
2363 5123 4.100084 CACATGCAGGGCGGAGGA 62.100 66.667 2.31 0.00 0.00 3.71
2364 5124 3.925630 AACACATGCAGGGCGGAGG 62.926 63.158 2.31 0.00 0.00 4.30
2365 5125 2.360350 AACACATGCAGGGCGGAG 60.360 61.111 2.31 0.00 0.00 4.63
2366 5126 2.359850 GAACACATGCAGGGCGGA 60.360 61.111 2.31 0.00 0.00 5.54
2367 5127 2.048023 ATGAACACATGCAGGGCGG 61.048 57.895 2.31 0.00 0.00 6.13
2368 5128 1.138036 CATGAACACATGCAGGGCG 59.862 57.895 2.31 0.00 35.67 6.13
2369 5129 0.454600 CTCATGAACACATGCAGGGC 59.545 55.000 2.31 0.00 40.55 5.19
2370 5130 0.454600 GCTCATGAACACATGCAGGG 59.545 55.000 2.31 0.00 40.55 4.45
2371 5131 0.454600 GGCTCATGAACACATGCAGG 59.545 55.000 0.00 0.00 40.55 4.85
2372 5132 1.170442 TGGCTCATGAACACATGCAG 58.830 50.000 0.00 0.00 40.55 4.41
2373 5133 1.542472 CTTGGCTCATGAACACATGCA 59.458 47.619 0.00 0.00 40.55 3.96
2374 5134 1.734707 GCTTGGCTCATGAACACATGC 60.735 52.381 12.70 12.70 40.55 4.06
2375 5135 1.135199 GGCTTGGCTCATGAACACATG 60.135 52.381 0.00 0.00 41.67 3.21
2376 5136 1.180029 GGCTTGGCTCATGAACACAT 58.820 50.000 0.00 0.00 0.00 3.21
2377 5137 0.178995 TGGCTTGGCTCATGAACACA 60.179 50.000 0.00 0.00 0.00 3.72
2378 5138 1.135199 CATGGCTTGGCTCATGAACAC 60.135 52.381 0.00 0.00 38.51 3.32
2379 5139 1.179152 CATGGCTTGGCTCATGAACA 58.821 50.000 0.00 0.00 38.51 3.18
2380 5140 1.133790 GTCATGGCTTGGCTCATGAAC 59.866 52.381 17.97 0.00 42.74 3.18
2381 5141 1.272037 TGTCATGGCTTGGCTCATGAA 60.272 47.619 17.97 10.50 42.74 2.57
2382 5142 0.328926 TGTCATGGCTTGGCTCATGA 59.671 50.000 14.70 14.70 40.78 3.07
2383 5143 0.454600 GTGTCATGGCTTGGCTCATG 59.545 55.000 6.54 11.75 38.01 3.07
2384 5144 0.682209 GGTGTCATGGCTTGGCTCAT 60.682 55.000 6.54 0.00 0.00 2.90
2385 5145 1.303561 GGTGTCATGGCTTGGCTCA 60.304 57.895 6.54 0.00 0.00 4.26
2386 5146 2.048603 GGGTGTCATGGCTTGGCTC 61.049 63.158 6.54 2.67 0.00 4.70
2387 5147 2.036256 GGGTGTCATGGCTTGGCT 59.964 61.111 6.54 0.00 0.00 4.75
2388 5148 3.070576 GGGGTGTCATGGCTTGGC 61.071 66.667 0.00 0.00 0.00 4.52
2389 5149 2.362889 GGGGGTGTCATGGCTTGG 60.363 66.667 0.00 0.00 0.00 3.61
2390 5150 0.542702 AAAGGGGGTGTCATGGCTTG 60.543 55.000 0.00 0.00 0.00 4.01
2391 5151 0.190815 AAAAGGGGGTGTCATGGCTT 59.809 50.000 0.00 0.00 0.00 4.35
2392 5152 0.190815 AAAAAGGGGGTGTCATGGCT 59.809 50.000 0.00 0.00 0.00 4.75
2393 5153 0.608130 GAAAAAGGGGGTGTCATGGC 59.392 55.000 0.00 0.00 0.00 4.40
2394 5154 2.309136 AGAAAAAGGGGGTGTCATGG 57.691 50.000 0.00 0.00 0.00 3.66
2395 5155 4.344968 AGAAAAGAAAAAGGGGGTGTCATG 59.655 41.667 0.00 0.00 0.00 3.07
2396 5156 4.556697 AGAAAAGAAAAAGGGGGTGTCAT 58.443 39.130 0.00 0.00 0.00 3.06
2397 5157 3.989056 AGAAAAGAAAAAGGGGGTGTCA 58.011 40.909 0.00 0.00 0.00 3.58
2398 5158 6.665992 ATAAGAAAAGAAAAAGGGGGTGTC 57.334 37.500 0.00 0.00 0.00 3.67
2399 5159 7.347222 AGAAATAAGAAAAGAAAAAGGGGGTGT 59.653 33.333 0.00 0.00 0.00 4.16
2400 5160 7.657354 CAGAAATAAGAAAAGAAAAAGGGGGTG 59.343 37.037 0.00 0.00 0.00 4.61
2401 5161 7.347222 ACAGAAATAAGAAAAGAAAAAGGGGGT 59.653 33.333 0.00 0.00 0.00 4.95
2402 5162 7.735917 ACAGAAATAAGAAAAGAAAAAGGGGG 58.264 34.615 0.00 0.00 0.00 5.40
2403 5163 9.613428 AAACAGAAATAAGAAAAGAAAAAGGGG 57.387 29.630 0.00 0.00 0.00 4.79
2415 5175 9.635404 TGGTAGAAGGAAAAACAGAAATAAGAA 57.365 29.630 0.00 0.00 0.00 2.52
2416 5176 9.063615 GTGGTAGAAGGAAAAACAGAAATAAGA 57.936 33.333 0.00 0.00 0.00 2.10
2417 5177 9.067986 AGTGGTAGAAGGAAAAACAGAAATAAG 57.932 33.333 0.00 0.00 0.00 1.73
2418 5178 8.990163 AGTGGTAGAAGGAAAAACAGAAATAA 57.010 30.769 0.00 0.00 0.00 1.40
2419 5179 8.990163 AAGTGGTAGAAGGAAAAACAGAAATA 57.010 30.769 0.00 0.00 0.00 1.40
2420 5180 7.898014 AAGTGGTAGAAGGAAAAACAGAAAT 57.102 32.000 0.00 0.00 0.00 2.17
2421 5181 8.680001 GTTAAGTGGTAGAAGGAAAAACAGAAA 58.320 33.333 0.00 0.00 0.00 2.52
2422 5182 8.050930 AGTTAAGTGGTAGAAGGAAAAACAGAA 58.949 33.333 0.00 0.00 0.00 3.02
2423 5183 7.571025 AGTTAAGTGGTAGAAGGAAAAACAGA 58.429 34.615 0.00 0.00 0.00 3.41
2424 5184 7.307219 CGAGTTAAGTGGTAGAAGGAAAAACAG 60.307 40.741 0.00 0.00 0.00 3.16
2425 5185 6.480981 CGAGTTAAGTGGTAGAAGGAAAAACA 59.519 38.462 0.00 0.00 0.00 2.83
2426 5186 6.073385 CCGAGTTAAGTGGTAGAAGGAAAAAC 60.073 42.308 0.00 0.00 0.00 2.43
2427 5187 5.993441 CCGAGTTAAGTGGTAGAAGGAAAAA 59.007 40.000 0.00 0.00 0.00 1.94
2428 5188 5.511888 CCCGAGTTAAGTGGTAGAAGGAAAA 60.512 44.000 0.00 0.00 0.00 2.29
2429 5189 4.020839 CCCGAGTTAAGTGGTAGAAGGAAA 60.021 45.833 0.00 0.00 0.00 3.13
2430 5190 3.512724 CCCGAGTTAAGTGGTAGAAGGAA 59.487 47.826 0.00 0.00 0.00 3.36
2431 5191 3.094572 CCCGAGTTAAGTGGTAGAAGGA 58.905 50.000 0.00 0.00 0.00 3.36
2432 5192 3.094572 TCCCGAGTTAAGTGGTAGAAGG 58.905 50.000 0.00 0.00 0.00 3.46
2433 5193 5.340439 AATCCCGAGTTAAGTGGTAGAAG 57.660 43.478 0.00 0.00 0.00 2.85
2434 5194 5.337813 GGAAATCCCGAGTTAAGTGGTAGAA 60.338 44.000 0.00 0.00 0.00 2.10
2435 5195 4.161001 GGAAATCCCGAGTTAAGTGGTAGA 59.839 45.833 0.00 0.00 0.00 2.59
2436 5196 4.081309 TGGAAATCCCGAGTTAAGTGGTAG 60.081 45.833 0.00 0.00 37.93 3.18
2437 5197 3.839490 TGGAAATCCCGAGTTAAGTGGTA 59.161 43.478 0.00 0.00 37.93 3.25
2438 5198 2.640826 TGGAAATCCCGAGTTAAGTGGT 59.359 45.455 0.00 0.00 37.93 4.16
2439 5199 3.343941 TGGAAATCCCGAGTTAAGTGG 57.656 47.619 0.00 0.00 37.93 4.00
2440 5200 5.240844 ACTTTTGGAAATCCCGAGTTAAGTG 59.759 40.000 0.00 0.00 37.93 3.16
2441 5201 5.382616 ACTTTTGGAAATCCCGAGTTAAGT 58.617 37.500 0.00 0.00 37.93 2.24
2442 5202 5.959618 ACTTTTGGAAATCCCGAGTTAAG 57.040 39.130 0.00 0.00 37.93 1.85
2443 5203 5.508320 GCAACTTTTGGAAATCCCGAGTTAA 60.508 40.000 10.12 0.00 35.09 2.01
2444 5204 4.022676 GCAACTTTTGGAAATCCCGAGTTA 60.023 41.667 10.12 0.00 35.09 2.24
2445 5205 3.243737 GCAACTTTTGGAAATCCCGAGTT 60.244 43.478 0.00 2.32 36.34 3.01
2446 5206 2.296190 GCAACTTTTGGAAATCCCGAGT 59.704 45.455 0.00 0.00 37.93 4.18
2447 5207 2.668279 CGCAACTTTTGGAAATCCCGAG 60.668 50.000 0.00 0.00 37.93 4.63
2448 5208 1.268352 CGCAACTTTTGGAAATCCCGA 59.732 47.619 0.00 0.00 37.93 5.14
2449 5209 1.268352 TCGCAACTTTTGGAAATCCCG 59.732 47.619 0.00 0.00 37.93 5.14
2450 5210 2.296190 ACTCGCAACTTTTGGAAATCCC 59.704 45.455 0.00 0.00 34.29 3.85
2451 5211 3.643159 ACTCGCAACTTTTGGAAATCC 57.357 42.857 0.00 0.00 0.00 3.01
2452 5212 5.518487 TGAAAACTCGCAACTTTTGGAAATC 59.482 36.000 0.00 0.00 0.00 2.17
2453 5213 5.415221 TGAAAACTCGCAACTTTTGGAAAT 58.585 33.333 0.00 0.00 0.00 2.17
2454 5214 4.810790 TGAAAACTCGCAACTTTTGGAAA 58.189 34.783 0.00 0.00 0.00 3.13
2455 5215 4.442375 TGAAAACTCGCAACTTTTGGAA 57.558 36.364 0.00 0.00 0.00 3.53
2456 5216 4.442375 TTGAAAACTCGCAACTTTTGGA 57.558 36.364 0.00 0.00 0.00 3.53
2457 5217 5.717038 AATTGAAAACTCGCAACTTTTGG 57.283 34.783 0.00 0.00 0.00 3.28
2458 5218 9.701355 AATAAAATTGAAAACTCGCAACTTTTG 57.299 25.926 0.00 0.00 28.23 2.44
2460 5220 9.701355 CAAATAAAATTGAAAACTCGCAACTTT 57.299 25.926 0.00 0.00 31.84 2.66
2461 5221 9.092876 TCAAATAAAATTGAAAACTCGCAACTT 57.907 25.926 0.00 0.00 36.42 2.66
2462 5222 8.641499 TCAAATAAAATTGAAAACTCGCAACT 57.359 26.923 0.00 0.00 36.42 3.16
2463 5223 8.751335 TCTCAAATAAAATTGAAAACTCGCAAC 58.249 29.630 0.00 0.00 38.75 4.17
2464 5224 8.864069 TCTCAAATAAAATTGAAAACTCGCAA 57.136 26.923 0.00 0.00 38.75 4.85
2465 5225 8.864069 TTCTCAAATAAAATTGAAAACTCGCA 57.136 26.923 0.00 0.00 38.75 5.10
2517 5277 9.790344 TGGACATTTTATGATTTTCCAAACATT 57.210 25.926 0.00 0.00 31.26 2.71
2518 5278 9.439500 CTGGACATTTTATGATTTTCCAAACAT 57.561 29.630 0.00 0.00 33.14 2.71
2519 5279 8.428063 ACTGGACATTTTATGATTTTCCAAACA 58.572 29.630 0.00 0.00 33.14 2.83
2520 5280 8.831715 ACTGGACATTTTATGATTTTCCAAAC 57.168 30.769 0.00 0.00 33.14 2.93
2552 5312 6.873076 TCTCAGAAACAATGCAAACAGTTTTT 59.127 30.769 0.00 3.42 34.62 1.94
2553 5313 6.397272 TCTCAGAAACAATGCAAACAGTTTT 58.603 32.000 0.00 0.00 34.62 2.43
2554 5314 5.964758 TCTCAGAAACAATGCAAACAGTTT 58.035 33.333 8.33 8.33 36.94 2.66
2555 5315 5.581126 TCTCAGAAACAATGCAAACAGTT 57.419 34.783 0.00 0.00 0.00 3.16
2556 5316 5.581126 TTCTCAGAAACAATGCAAACAGT 57.419 34.783 0.00 0.00 0.00 3.55
2557 5317 6.698329 TGATTTCTCAGAAACAATGCAAACAG 59.302 34.615 0.68 0.00 0.00 3.16
2558 5318 6.571605 TGATTTCTCAGAAACAATGCAAACA 58.428 32.000 0.68 0.00 0.00 2.83
2559 5319 7.647907 ATGATTTCTCAGAAACAATGCAAAC 57.352 32.000 0.68 0.00 34.12 2.93
2560 5320 9.761504 TTTATGATTTCTCAGAAACAATGCAAA 57.238 25.926 0.68 0.00 37.60 3.68
2561 5321 9.761504 TTTTATGATTTCTCAGAAACAATGCAA 57.238 25.926 0.68 0.00 41.08 4.08
2562 5322 9.932207 ATTTTATGATTTCTCAGAAACAATGCA 57.068 25.926 0.68 0.00 41.08 3.96
2606 5366 9.829507 ACTGAACATTTTATGATTTTCCAAACA 57.170 25.926 0.00 0.00 0.00 2.83
2672 5432 7.199766 TGAGTATGTTTTCTGCGAACATTTTT 58.800 30.769 7.66 0.00 43.23 1.94
2673 5433 6.734137 TGAGTATGTTTTCTGCGAACATTTT 58.266 32.000 7.66 0.00 43.23 1.82
2674 5434 6.312399 TGAGTATGTTTTCTGCGAACATTT 57.688 33.333 7.66 0.00 43.23 2.32
2675 5435 5.940192 TGAGTATGTTTTCTGCGAACATT 57.060 34.783 7.66 0.00 43.23 2.71
2676 5436 5.643348 TCATGAGTATGTTTTCTGCGAACAT 59.357 36.000 7.51 7.51 46.34 2.71
2677 5437 4.994217 TCATGAGTATGTTTTCTGCGAACA 59.006 37.500 0.00 0.00 40.86 3.18
2678 5438 5.530519 TCATGAGTATGTTTTCTGCGAAC 57.469 39.130 0.00 0.00 35.73 3.95
2679 5439 6.741992 AATCATGAGTATGTTTTCTGCGAA 57.258 33.333 0.09 0.00 35.73 4.70
2680 5440 6.741992 AAATCATGAGTATGTTTTCTGCGA 57.258 33.333 0.09 0.00 33.19 5.10
2681 5441 8.390354 TCTAAAATCATGAGTATGTTTTCTGCG 58.610 33.333 0.09 0.00 35.96 5.18
2724 5484 9.846248 GCTTTGTTCATTATTTACAGATCTGTT 57.154 29.630 32.14 17.71 41.83 3.16
2725 5485 9.236006 AGCTTTGTTCATTATTTACAGATCTGT 57.764 29.630 30.11 30.11 46.87 3.41
2730 5490 8.447833 CGGTTAGCTTTGTTCATTATTTACAGA 58.552 33.333 0.00 0.00 0.00 3.41
2731 5491 7.696453 CCGGTTAGCTTTGTTCATTATTTACAG 59.304 37.037 0.00 0.00 0.00 2.74
2732 5492 7.531716 CCGGTTAGCTTTGTTCATTATTTACA 58.468 34.615 0.00 0.00 0.00 2.41
2733 5493 6.471198 GCCGGTTAGCTTTGTTCATTATTTAC 59.529 38.462 1.90 0.00 0.00 2.01
2734 5494 6.376018 AGCCGGTTAGCTTTGTTCATTATTTA 59.624 34.615 1.90 0.00 41.41 1.40
2735 5495 5.185056 AGCCGGTTAGCTTTGTTCATTATTT 59.815 36.000 1.90 0.00 41.41 1.40
2736 5496 4.705023 AGCCGGTTAGCTTTGTTCATTATT 59.295 37.500 1.90 0.00 41.41 1.40
2737 5497 4.270008 AGCCGGTTAGCTTTGTTCATTAT 58.730 39.130 1.90 0.00 41.41 1.28
2738 5498 3.681593 AGCCGGTTAGCTTTGTTCATTA 58.318 40.909 1.90 0.00 41.41 1.90
2739 5499 2.514803 AGCCGGTTAGCTTTGTTCATT 58.485 42.857 1.90 0.00 41.41 2.57
2740 5500 2.200373 AGCCGGTTAGCTTTGTTCAT 57.800 45.000 1.90 0.00 41.41 2.57
2741 5501 3.717842 AGCCGGTTAGCTTTGTTCA 57.282 47.368 1.90 0.00 41.41 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.