Multiple sequence alignment - TraesCS3A01G509900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G509900 chr3A 100.000 2764 0 0 1 2764 730209652 730206889 0.000000e+00 5105.0
1 TraesCS3A01G509900 chr3A 88.265 1568 121 18 476 2000 730178882 730177335 0.000000e+00 1818.0
2 TraesCS3A01G509900 chr3A 80.943 1039 118 34 466 1456 730267991 730266985 0.000000e+00 749.0
3 TraesCS3A01G509900 chr3A 79.254 1099 149 50 851 1907 730280123 730279062 0.000000e+00 693.0
4 TraesCS3A01G509900 chr3A 80.678 295 38 15 453 737 730336616 730336331 7.760000e-51 211.0
5 TraesCS3A01G509900 chr3D 94.719 2045 70 16 476 2517 600593902 600595911 0.000000e+00 3144.0
6 TraesCS3A01G509900 chr3D 89.281 1502 116 16 476 1962 600607328 600608799 0.000000e+00 1840.0
7 TraesCS3A01G509900 chr3D 78.664 1153 155 60 800 1907 600563185 600564291 0.000000e+00 682.0
8 TraesCS3A01G509900 chr3D 81.527 812 88 27 682 1456 600584567 600585353 1.820000e-171 612.0
9 TraesCS3A01G509900 chr3D 89.831 472 39 4 1 469 600590968 600591433 5.100000e-167 597.0
10 TraesCS3A01G509900 chr3D 89.333 225 23 1 2511 2735 601860581 601860804 5.830000e-72 281.0
11 TraesCS3A01G509900 chr3D 95.455 44 2 0 2516 2559 231963964 231964007 1.370000e-08 71.3
12 TraesCS3A01G509900 chr3D 89.362 47 2 1 1995 2038 339592249 339592295 3.850000e-04 56.5
13 TraesCS3A01G509900 chr3B 87.612 1897 155 31 225 2093 807881153 807882997 0.000000e+00 2128.0
14 TraesCS3A01G509900 chr3B 87.922 1747 147 24 509 2233 807929889 807931593 0.000000e+00 1999.0
15 TraesCS3A01G509900 chr3B 79.250 1547 202 69 453 1922 807812356 807813860 0.000000e+00 968.0
16 TraesCS3A01G509900 chr3B 78.274 1031 123 57 473 1456 807855458 807856434 1.110000e-158 569.0
17 TraesCS3A01G509900 chr3B 93.023 43 3 0 2003 2045 751412478 751412436 2.300000e-06 63.9
18 TraesCS3A01G509900 chr7A 89.147 258 28 0 2505 2762 657434564 657434307 3.430000e-84 322.0
19 TraesCS3A01G509900 chr7A 83.621 116 18 1 2499 2613 58239574 58239689 1.050000e-19 108.0
20 TraesCS3A01G509900 chr4A 84.259 108 17 0 2510 2617 489633168 489633061 3.760000e-19 106.0
21 TraesCS3A01G509900 chr4A 89.796 49 5 0 1990 2038 708712532 708712580 2.300000e-06 63.9
22 TraesCS3A01G509900 chr7D 92.683 41 2 1 1998 2038 584302590 584302629 1.070000e-04 58.4
23 TraesCS3A01G509900 chr4B 97.059 34 1 0 2005 2038 420505909 420505876 1.070000e-04 58.4
24 TraesCS3A01G509900 chr2A 89.362 47 4 1 1993 2038 617465265 617465219 1.070000e-04 58.4
25 TraesCS3A01G509900 chr2A 96.970 33 1 0 2006 2038 645178089 645178057 3.850000e-04 56.5
26 TraesCS3A01G509900 chr5D 90.698 43 0 3 1994 2036 382960325 382960363 1.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G509900 chr3A 730206889 730209652 2763 True 5105.0 5105 100.000 1 2764 1 chr3A.!!$R2 2763
1 TraesCS3A01G509900 chr3A 730177335 730178882 1547 True 1818.0 1818 88.265 476 2000 1 chr3A.!!$R1 1524
2 TraesCS3A01G509900 chr3A 730266985 730267991 1006 True 749.0 749 80.943 466 1456 1 chr3A.!!$R3 990
3 TraesCS3A01G509900 chr3A 730279062 730280123 1061 True 693.0 693 79.254 851 1907 1 chr3A.!!$R4 1056
4 TraesCS3A01G509900 chr3D 600590968 600595911 4943 False 1870.5 3144 92.275 1 2517 2 chr3D.!!$F7 2516
5 TraesCS3A01G509900 chr3D 600607328 600608799 1471 False 1840.0 1840 89.281 476 1962 1 chr3D.!!$F5 1486
6 TraesCS3A01G509900 chr3D 600563185 600564291 1106 False 682.0 682 78.664 800 1907 1 chr3D.!!$F3 1107
7 TraesCS3A01G509900 chr3D 600584567 600585353 786 False 612.0 612 81.527 682 1456 1 chr3D.!!$F4 774
8 TraesCS3A01G509900 chr3B 807881153 807882997 1844 False 2128.0 2128 87.612 225 2093 1 chr3B.!!$F3 1868
9 TraesCS3A01G509900 chr3B 807929889 807931593 1704 False 1999.0 1999 87.922 509 2233 1 chr3B.!!$F4 1724
10 TraesCS3A01G509900 chr3B 807812356 807813860 1504 False 968.0 968 79.250 453 1922 1 chr3B.!!$F1 1469
11 TraesCS3A01G509900 chr3B 807855458 807856434 976 False 569.0 569 78.274 473 1456 1 chr3B.!!$F2 983

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
933 3472 0.746063 TTTGTGACAGCCAAGCAAGG 59.254 50.0 0.0 0.0 0.0 3.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2739 5462 0.034337 GGACACGGACTTGGTAAGCA 59.966 55.0 0.0 0.0 0.0 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 5.003160 CCATGAGTGATAACAACAAGTCCA 58.997 41.667 0.00 0.00 0.00 4.02
38 39 7.397892 TGAGTGATAACAACAAGTCCAAAAA 57.602 32.000 0.00 0.00 0.00 1.94
40 41 7.338196 TGAGTGATAACAACAAGTCCAAAAAGA 59.662 33.333 0.00 0.00 0.00 2.52
46 47 5.478407 ACAACAAGTCCAAAAAGAAGGTTG 58.522 37.500 0.00 0.00 39.07 3.77
52 53 1.953686 CCAAAAAGAAGGTTGCCGAGA 59.046 47.619 0.00 0.00 0.00 4.04
67 68 1.220749 GAGAATACTGCCACCGCCA 59.779 57.895 0.00 0.00 0.00 5.69
70 71 2.845752 GAATACTGCCACCGCCACGA 62.846 60.000 0.00 0.00 0.00 4.35
141 142 5.172934 TGTTTATTCCTGTGTTAGCCGTAG 58.827 41.667 0.00 0.00 0.00 3.51
194 195 5.646692 ACATTAGTATGGGCTTACATGGT 57.353 39.130 0.00 0.00 36.01 3.55
236 237 7.492020 GCTTAATATTGTGAATGCCATGTTCAA 59.508 33.333 0.00 0.00 37.34 2.69
385 405 8.668510 TTAATCAAGAGAACTCATCCTTATGC 57.331 34.615 4.64 0.00 32.76 3.14
419 439 3.651803 TTTACCAAAGGCATCAAACGG 57.348 42.857 0.00 0.00 0.00 4.44
497 2981 6.640518 TGTTAACAGTTCCTCATACTCATCC 58.359 40.000 3.59 0.00 0.00 3.51
517 3001 6.535150 TCATCCGCTGAACTGTTAATAAGAAG 59.465 38.462 0.00 0.00 0.00 2.85
538 3022 5.330455 AGCATATGTGACGAGAAAGAGAA 57.670 39.130 4.29 0.00 0.00 2.87
578 3062 7.912250 GCACATTTTCATTTGGTACTAGAGATG 59.088 37.037 0.00 0.00 0.00 2.90
625 3114 5.644206 AGGAGCGGAAAGAAGAATAACTTTC 59.356 40.000 0.00 0.00 46.16 2.62
710 3208 4.511826 AGAAAACCACTTGATGAGACGAAC 59.488 41.667 0.00 0.00 0.00 3.95
933 3472 0.746063 TTTGTGACAGCCAAGCAAGG 59.254 50.000 0.00 0.00 0.00 3.61
1005 3553 1.517242 CATCCGCTCTTAGAATGGCC 58.483 55.000 0.00 0.00 0.00 5.36
1222 3812 2.828095 GCATGTACGGGCATGGCA 60.828 61.111 22.06 0.00 44.58 4.92
1428 4051 2.469826 CACAAGAATATGGAGCGCGTA 58.530 47.619 8.43 0.00 0.00 4.42
1478 4101 3.802675 GCCTTCGCCCTGGTAATTAGTAG 60.803 52.174 0.00 0.00 0.00 2.57
1479 4102 3.244112 CCTTCGCCCTGGTAATTAGTAGG 60.244 52.174 7.63 7.63 0.00 3.18
1480 4103 3.317455 TCGCCCTGGTAATTAGTAGGA 57.683 47.619 13.92 0.00 31.91 2.94
1481 4104 3.228453 TCGCCCTGGTAATTAGTAGGAG 58.772 50.000 13.92 9.05 31.91 3.69
1483 4106 4.141181 TCGCCCTGGTAATTAGTAGGAGTA 60.141 45.833 13.92 0.29 31.91 2.59
1484 4107 4.217983 CGCCCTGGTAATTAGTAGGAGTAG 59.782 50.000 13.92 2.24 31.91 2.57
1485 4108 5.146298 GCCCTGGTAATTAGTAGGAGTAGT 58.854 45.833 13.92 0.00 31.91 2.73
1486 4109 6.310149 GCCCTGGTAATTAGTAGGAGTAGTA 58.690 44.000 13.92 0.00 31.91 1.82
1488 4111 6.718912 CCCTGGTAATTAGTAGGAGTAGTACC 59.281 46.154 13.92 0.00 31.91 3.34
1501 4124 9.500785 GTAGGAGTAGTACCTAATTACTGTAGG 57.499 40.741 0.00 0.00 43.37 3.18
1519 4153 5.886992 TGTAGGTCAACATCACATACTACG 58.113 41.667 0.00 0.00 33.22 3.51
1549 4189 6.208204 GCAATTAACCCATCTAATCATCAGCT 59.792 38.462 0.00 0.00 0.00 4.24
1715 4363 1.068250 GAAGCAGCCTAGCTACGGG 59.932 63.158 10.17 3.49 45.89 5.28
1893 4592 1.138266 GCGTCCCTACAATAAGCCAGA 59.862 52.381 0.00 0.00 0.00 3.86
1978 4698 8.766000 ACGTGTGTAATGTGATCTAAAACATA 57.234 30.769 0.00 0.00 35.99 2.29
1979 4699 9.210329 ACGTGTGTAATGTGATCTAAAACATAA 57.790 29.630 0.00 0.00 35.99 1.90
2055 4775 4.012374 TGGCTTGGAATTGCTCTTCTTAG 58.988 43.478 0.00 0.00 0.00 2.18
2060 4780 4.666512 TGGAATTGCTCTTCTTAGCCTTT 58.333 39.130 0.00 0.00 42.05 3.11
2061 4781 5.815581 TGGAATTGCTCTTCTTAGCCTTTA 58.184 37.500 0.00 0.00 42.05 1.85
2062 4782 6.426587 TGGAATTGCTCTTCTTAGCCTTTAT 58.573 36.000 0.00 0.00 42.05 1.40
2063 4783 7.573710 TGGAATTGCTCTTCTTAGCCTTTATA 58.426 34.615 0.00 0.00 42.05 0.98
2093 4813 5.006746 CGTAAGTCCAGATACCAATTCAAGC 59.993 44.000 0.00 0.00 0.00 4.01
2105 4825 2.556622 CAATTCAAGCAAGGTAACCCGT 59.443 45.455 0.00 0.00 35.12 5.28
2109 4829 0.037605 AAGCAAGGTAACCCGTCTCG 60.038 55.000 0.00 0.00 35.12 4.04
2178 4898 5.303078 TCTCTCAGTTCTTCTTTAGTGCAGT 59.697 40.000 0.00 0.00 0.00 4.40
2187 4907 7.891183 TCTTCTTTAGTGCAGTCAGAAATAC 57.109 36.000 14.18 0.00 0.00 1.89
2195 4915 4.278419 GTGCAGTCAGAAATACAAAGGGTT 59.722 41.667 0.00 0.00 0.00 4.11
2202 4922 7.172703 AGTCAGAAATACAAAGGGTTAAACTCG 59.827 37.037 0.00 0.00 0.00 4.18
2220 4940 7.972832 AAACTCGAGTGGTTTGTAAATATGA 57.027 32.000 20.85 0.00 35.84 2.15
2250 4970 5.594317 GCTAACATTCATATCCCAACACCTT 59.406 40.000 0.00 0.00 0.00 3.50
2422 5143 1.334556 TGCTATGGCATGCATCGAAAC 59.665 47.619 21.36 0.00 44.28 2.78
2444 5165 7.675962 AACGGCTTCATATTGTTGTTTACTA 57.324 32.000 0.00 0.00 0.00 1.82
2552 5275 5.679601 AGATGGAAGCTTTCATAGTTCTCC 58.320 41.667 20.48 6.24 0.00 3.71
2553 5276 4.908601 TGGAAGCTTTCATAGTTCTCCA 57.091 40.909 2.32 0.00 0.00 3.86
2554 5277 5.441718 TGGAAGCTTTCATAGTTCTCCAT 57.558 39.130 2.32 0.00 0.00 3.41
2555 5278 6.560003 TGGAAGCTTTCATAGTTCTCCATA 57.440 37.500 2.32 0.00 0.00 2.74
2556 5279 7.141758 TGGAAGCTTTCATAGTTCTCCATAT 57.858 36.000 2.32 0.00 0.00 1.78
2557 5280 6.994496 TGGAAGCTTTCATAGTTCTCCATATG 59.006 38.462 2.32 0.00 0.00 1.78
2558 5281 6.995091 GGAAGCTTTCATAGTTCTCCATATGT 59.005 38.462 0.00 0.00 32.37 2.29
2559 5282 7.500559 GGAAGCTTTCATAGTTCTCCATATGTT 59.499 37.037 0.00 0.00 32.37 2.71
2560 5283 9.547753 GAAGCTTTCATAGTTCTCCATATGTTA 57.452 33.333 0.00 0.00 32.37 2.41
2561 5284 8.894768 AGCTTTCATAGTTCTCCATATGTTAC 57.105 34.615 1.24 0.00 32.37 2.50
2562 5285 7.934120 AGCTTTCATAGTTCTCCATATGTTACC 59.066 37.037 1.24 0.00 32.37 2.85
2563 5286 7.173390 GCTTTCATAGTTCTCCATATGTTACCC 59.827 40.741 1.24 0.00 32.37 3.69
2564 5287 6.681729 TCATAGTTCTCCATATGTTACCCC 57.318 41.667 1.24 0.00 32.37 4.95
2565 5288 6.390504 TCATAGTTCTCCATATGTTACCCCT 58.609 40.000 1.24 0.00 32.37 4.79
2566 5289 6.849697 TCATAGTTCTCCATATGTTACCCCTT 59.150 38.462 1.24 0.00 32.37 3.95
2567 5290 7.349859 TCATAGTTCTCCATATGTTACCCCTTT 59.650 37.037 1.24 0.00 32.37 3.11
2568 5291 8.656806 CATAGTTCTCCATATGTTACCCCTTTA 58.343 37.037 1.24 0.00 0.00 1.85
2569 5292 7.707467 AGTTCTCCATATGTTACCCCTTTAT 57.293 36.000 1.24 0.00 0.00 1.40
2570 5293 8.808240 AGTTCTCCATATGTTACCCCTTTATA 57.192 34.615 1.24 0.00 0.00 0.98
2571 5294 9.406662 AGTTCTCCATATGTTACCCCTTTATAT 57.593 33.333 1.24 0.00 0.00 0.86
2572 5295 9.668497 GTTCTCCATATGTTACCCCTTTATATC 57.332 37.037 1.24 0.00 0.00 1.63
2573 5296 8.388656 TCTCCATATGTTACCCCTTTATATCC 57.611 38.462 1.24 0.00 0.00 2.59
2574 5297 7.125204 TCTCCATATGTTACCCCTTTATATCCG 59.875 40.741 1.24 0.00 0.00 4.18
2575 5298 6.731919 TCCATATGTTACCCCTTTATATCCGT 59.268 38.462 1.24 0.00 0.00 4.69
2576 5299 7.238096 TCCATATGTTACCCCTTTATATCCGTT 59.762 37.037 1.24 0.00 0.00 4.44
2577 5300 7.335924 CCATATGTTACCCCTTTATATCCGTTG 59.664 40.741 1.24 0.00 0.00 4.10
2578 5301 5.954153 TGTTACCCCTTTATATCCGTTGA 57.046 39.130 0.00 0.00 0.00 3.18
2579 5302 6.503560 TGTTACCCCTTTATATCCGTTGAT 57.496 37.500 0.00 0.00 34.87 2.57
2580 5303 6.902408 TGTTACCCCTTTATATCCGTTGATT 58.098 36.000 0.00 0.00 32.18 2.57
2581 5304 7.348033 TGTTACCCCTTTATATCCGTTGATTT 58.652 34.615 0.00 0.00 32.18 2.17
2582 5305 7.835181 TGTTACCCCTTTATATCCGTTGATTTT 59.165 33.333 0.00 0.00 32.18 1.82
2583 5306 6.709018 ACCCCTTTATATCCGTTGATTTTG 57.291 37.500 0.00 0.00 32.18 2.44
2584 5307 5.596772 ACCCCTTTATATCCGTTGATTTTGG 59.403 40.000 0.00 0.00 32.18 3.28
2585 5308 5.010617 CCCCTTTATATCCGTTGATTTTGGG 59.989 44.000 0.00 0.00 32.18 4.12
2586 5309 5.596772 CCCTTTATATCCGTTGATTTTGGGT 59.403 40.000 0.00 0.00 32.18 4.51
2587 5310 6.097696 CCCTTTATATCCGTTGATTTTGGGTT 59.902 38.462 0.00 0.00 32.18 4.11
2588 5311 7.285858 CCCTTTATATCCGTTGATTTTGGGTTA 59.714 37.037 0.00 0.00 32.18 2.85
2589 5312 8.349983 CCTTTATATCCGTTGATTTTGGGTTAG 58.650 37.037 0.00 0.00 32.18 2.34
2590 5313 8.810990 TTTATATCCGTTGATTTTGGGTTAGT 57.189 30.769 0.00 0.00 32.18 2.24
2591 5314 6.937436 ATATCCGTTGATTTTGGGTTAGTC 57.063 37.500 0.00 0.00 32.18 2.59
2592 5315 4.088056 TCCGTTGATTTTGGGTTAGTCA 57.912 40.909 0.00 0.00 0.00 3.41
2593 5316 4.658063 TCCGTTGATTTTGGGTTAGTCAT 58.342 39.130 0.00 0.00 0.00 3.06
2594 5317 5.806818 TCCGTTGATTTTGGGTTAGTCATA 58.193 37.500 0.00 0.00 0.00 2.15
2595 5318 6.239396 TCCGTTGATTTTGGGTTAGTCATAA 58.761 36.000 0.00 0.00 0.00 1.90
2596 5319 6.715718 TCCGTTGATTTTGGGTTAGTCATAAA 59.284 34.615 0.00 0.00 0.00 1.40
2597 5320 7.394923 TCCGTTGATTTTGGGTTAGTCATAAAT 59.605 33.333 0.00 0.00 0.00 1.40
2598 5321 8.679100 CCGTTGATTTTGGGTTAGTCATAAATA 58.321 33.333 0.00 0.00 0.00 1.40
2606 5329 7.759489 TGGGTTAGTCATAAATATTGATGGC 57.241 36.000 9.13 9.13 0.00 4.40
2607 5330 7.526041 TGGGTTAGTCATAAATATTGATGGCT 58.474 34.615 21.18 21.18 40.93 4.75
2608 5331 7.448161 TGGGTTAGTCATAAATATTGATGGCTG 59.552 37.037 24.69 0.00 38.45 4.85
2609 5332 7.094205 GGGTTAGTCATAAATATTGATGGCTGG 60.094 40.741 24.69 0.00 38.45 4.85
2610 5333 7.094205 GGTTAGTCATAAATATTGATGGCTGGG 60.094 40.741 24.69 0.00 38.45 4.45
2611 5334 6.204852 AGTCATAAATATTGATGGCTGGGA 57.795 37.500 17.64 0.00 36.66 4.37
2612 5335 6.797707 AGTCATAAATATTGATGGCTGGGAT 58.202 36.000 17.64 0.00 36.66 3.85
2613 5336 7.243824 AGTCATAAATATTGATGGCTGGGATT 58.756 34.615 17.64 0.00 36.66 3.01
2614 5337 7.731688 AGTCATAAATATTGATGGCTGGGATTT 59.268 33.333 17.64 0.00 36.66 2.17
2615 5338 9.023962 GTCATAAATATTGATGGCTGGGATTTA 57.976 33.333 9.81 0.00 0.00 1.40
2616 5339 9.599056 TCATAAATATTGATGGCTGGGATTTAA 57.401 29.630 12.16 0.00 0.00 1.52
2617 5340 9.643693 CATAAATATTGATGGCTGGGATTTAAC 57.356 33.333 4.98 0.00 0.00 2.01
2618 5341 7.673641 AAATATTGATGGCTGGGATTTAACA 57.326 32.000 0.00 0.00 0.00 2.41
2619 5342 6.906157 ATATTGATGGCTGGGATTTAACAG 57.094 37.500 0.00 0.00 37.76 3.16
2620 5343 4.314522 TTGATGGCTGGGATTTAACAGA 57.685 40.909 0.00 0.00 36.86 3.41
2621 5344 4.524802 TGATGGCTGGGATTTAACAGAT 57.475 40.909 0.00 0.00 36.86 2.90
2622 5345 5.645056 TGATGGCTGGGATTTAACAGATA 57.355 39.130 0.00 0.00 36.86 1.98
2623 5346 6.012337 TGATGGCTGGGATTTAACAGATAA 57.988 37.500 0.00 0.00 36.86 1.75
2624 5347 6.430864 TGATGGCTGGGATTTAACAGATAAA 58.569 36.000 0.00 0.00 37.86 1.40
2625 5348 7.068702 TGATGGCTGGGATTTAACAGATAAAT 58.931 34.615 0.00 0.00 44.92 1.40
2626 5349 8.224025 TGATGGCTGGGATTTAACAGATAAATA 58.776 33.333 0.00 0.00 42.84 1.40
2627 5350 9.247861 GATGGCTGGGATTTAACAGATAAATAT 57.752 33.333 0.00 0.00 42.84 1.28
2629 5352 9.515226 TGGCTGGGATTTAACAGATAAATATAC 57.485 33.333 0.00 0.00 42.84 1.47
2630 5353 8.957466 GGCTGGGATTTAACAGATAAATATACC 58.043 37.037 0.00 1.45 42.84 2.73
2631 5354 9.740710 GCTGGGATTTAACAGATAAATATACCT 57.259 33.333 0.00 0.00 42.84 3.08
2648 5371 3.214696 ACCTATTTAGATGCACCAGGC 57.785 47.619 0.00 0.00 45.13 4.85
2649 5372 2.780010 ACCTATTTAGATGCACCAGGCT 59.220 45.455 0.00 0.00 45.15 4.58
2650 5373 3.203040 ACCTATTTAGATGCACCAGGCTT 59.797 43.478 0.00 0.00 45.15 4.35
2651 5374 3.567164 CCTATTTAGATGCACCAGGCTTG 59.433 47.826 0.00 0.00 45.15 4.01
2652 5375 2.877097 TTTAGATGCACCAGGCTTGA 57.123 45.000 0.00 0.00 45.15 3.02
2653 5376 2.113860 TTAGATGCACCAGGCTTGAC 57.886 50.000 0.00 0.00 45.15 3.18
2654 5377 0.983467 TAGATGCACCAGGCTTGACA 59.017 50.000 0.00 0.00 45.15 3.58
2655 5378 0.111061 AGATGCACCAGGCTTGACAA 59.889 50.000 0.00 0.00 45.15 3.18
2656 5379 0.242017 GATGCACCAGGCTTGACAAC 59.758 55.000 0.00 0.00 45.15 3.32
2657 5380 0.467844 ATGCACCAGGCTTGACAACA 60.468 50.000 0.00 0.00 45.15 3.33
2658 5381 0.682532 TGCACCAGGCTTGACAACAA 60.683 50.000 0.00 0.00 45.15 2.83
2659 5382 0.675633 GCACCAGGCTTGACAACAAT 59.324 50.000 0.00 0.00 40.25 2.71
2660 5383 1.069049 GCACCAGGCTTGACAACAATT 59.931 47.619 0.00 0.00 40.25 2.32
2661 5384 2.483538 GCACCAGGCTTGACAACAATTT 60.484 45.455 0.00 0.00 40.25 1.82
2662 5385 3.795877 CACCAGGCTTGACAACAATTTT 58.204 40.909 0.00 0.00 35.37 1.82
2663 5386 4.739137 GCACCAGGCTTGACAACAATTTTA 60.739 41.667 0.00 0.00 40.25 1.52
2664 5387 5.540911 CACCAGGCTTGACAACAATTTTAT 58.459 37.500 0.00 0.00 35.37 1.40
2665 5388 5.990996 CACCAGGCTTGACAACAATTTTATT 59.009 36.000 0.00 0.00 35.37 1.40
2666 5389 6.146021 CACCAGGCTTGACAACAATTTTATTC 59.854 38.462 0.00 0.00 35.37 1.75
2667 5390 5.639082 CCAGGCTTGACAACAATTTTATTCC 59.361 40.000 0.00 0.00 35.37 3.01
2668 5391 6.222389 CAGGCTTGACAACAATTTTATTCCA 58.778 36.000 0.00 0.00 35.37 3.53
2669 5392 6.705381 CAGGCTTGACAACAATTTTATTCCAA 59.295 34.615 0.00 0.00 35.37 3.53
2670 5393 6.930722 AGGCTTGACAACAATTTTATTCCAAG 59.069 34.615 0.00 0.00 35.37 3.61
2671 5394 6.147656 GGCTTGACAACAATTTTATTCCAAGG 59.852 38.462 0.00 0.00 35.37 3.61
2672 5395 6.705825 GCTTGACAACAATTTTATTCCAAGGT 59.294 34.615 0.00 0.00 35.37 3.50
2673 5396 7.307337 GCTTGACAACAATTTTATTCCAAGGTG 60.307 37.037 0.00 0.00 35.37 4.00
2674 5397 7.118496 TGACAACAATTTTATTCCAAGGTGT 57.882 32.000 0.00 0.00 0.00 4.16
2675 5398 8.239038 TGACAACAATTTTATTCCAAGGTGTA 57.761 30.769 0.00 0.00 0.00 2.90
2676 5399 8.865090 TGACAACAATTTTATTCCAAGGTGTAT 58.135 29.630 0.00 0.00 0.00 2.29
2679 5402 9.284594 CAACAATTTTATTCCAAGGTGTATACG 57.715 33.333 0.00 0.00 0.00 3.06
2680 5403 7.992008 ACAATTTTATTCCAAGGTGTATACGG 58.008 34.615 0.00 0.00 0.00 4.02
2681 5404 6.628919 ATTTTATTCCAAGGTGTATACGGC 57.371 37.500 0.00 0.00 0.00 5.68
2682 5405 5.362105 TTTATTCCAAGGTGTATACGGCT 57.638 39.130 0.00 0.00 0.00 5.52
2683 5406 2.684001 TTCCAAGGTGTATACGGCTG 57.316 50.000 0.00 0.00 0.00 4.85
2684 5407 0.828022 TCCAAGGTGTATACGGCTGG 59.172 55.000 0.00 2.97 0.00 4.85
2685 5408 0.814010 CCAAGGTGTATACGGCTGGC 60.814 60.000 0.00 0.00 0.00 4.85
2686 5409 0.107897 CAAGGTGTATACGGCTGGCA 60.108 55.000 1.08 0.00 0.00 4.92
2687 5410 0.616371 AAGGTGTATACGGCTGGCAA 59.384 50.000 1.08 0.00 0.00 4.52
2688 5411 0.178068 AGGTGTATACGGCTGGCAAG 59.822 55.000 1.08 0.00 0.00 4.01
2689 5412 0.107848 GGTGTATACGGCTGGCAAGT 60.108 55.000 1.08 0.00 0.00 3.16
2690 5413 1.137479 GGTGTATACGGCTGGCAAGTA 59.863 52.381 1.08 0.00 0.00 2.24
2691 5414 2.419021 GGTGTATACGGCTGGCAAGTAA 60.419 50.000 1.08 0.00 0.00 2.24
2692 5415 2.606272 GTGTATACGGCTGGCAAGTAAC 59.394 50.000 1.08 0.00 0.00 2.50
2693 5416 2.207590 GTATACGGCTGGCAAGTAACC 58.792 52.381 1.08 0.00 0.00 2.85
2694 5417 0.616371 ATACGGCTGGCAAGTAACCA 59.384 50.000 1.08 0.00 35.40 3.67
2695 5418 0.397187 TACGGCTGGCAAGTAACCAA 59.603 50.000 1.08 0.00 36.56 3.67
2696 5419 1.170290 ACGGCTGGCAAGTAACCAAC 61.170 55.000 1.08 0.00 36.56 3.77
2697 5420 1.169661 CGGCTGGCAAGTAACCAACA 61.170 55.000 1.08 0.00 36.56 3.33
2698 5421 0.598065 GGCTGGCAAGTAACCAACAG 59.402 55.000 0.00 0.00 36.56 3.16
2699 5422 1.318576 GCTGGCAAGTAACCAACAGT 58.681 50.000 0.00 0.00 36.56 3.55
2700 5423 1.266989 GCTGGCAAGTAACCAACAGTC 59.733 52.381 0.00 0.00 36.56 3.51
2701 5424 1.880027 CTGGCAAGTAACCAACAGTCC 59.120 52.381 0.00 0.00 36.56 3.85
2702 5425 1.213182 TGGCAAGTAACCAACAGTCCA 59.787 47.619 0.00 0.00 33.12 4.02
2703 5426 2.158534 TGGCAAGTAACCAACAGTCCAT 60.159 45.455 0.00 0.00 33.12 3.41
2704 5427 2.488153 GGCAAGTAACCAACAGTCCATC 59.512 50.000 0.00 0.00 0.00 3.51
2705 5428 3.146066 GCAAGTAACCAACAGTCCATCA 58.854 45.455 0.00 0.00 0.00 3.07
2706 5429 3.758554 GCAAGTAACCAACAGTCCATCAT 59.241 43.478 0.00 0.00 0.00 2.45
2707 5430 4.379813 GCAAGTAACCAACAGTCCATCATG 60.380 45.833 0.00 0.00 0.00 3.07
2708 5431 3.955471 AGTAACCAACAGTCCATCATGG 58.045 45.455 0.00 0.00 39.43 3.66
2709 5432 1.549203 AACCAACAGTCCATCATGGC 58.451 50.000 0.00 0.00 37.47 4.40
2710 5433 0.323725 ACCAACAGTCCATCATGGCC 60.324 55.000 0.00 0.00 37.47 5.36
2711 5434 1.039233 CCAACAGTCCATCATGGCCC 61.039 60.000 0.00 0.00 37.47 5.80
2712 5435 0.033796 CAACAGTCCATCATGGCCCT 60.034 55.000 0.00 0.00 37.47 5.19
2713 5436 0.257039 AACAGTCCATCATGGCCCTC 59.743 55.000 0.00 0.00 37.47 4.30
2714 5437 0.915872 ACAGTCCATCATGGCCCTCA 60.916 55.000 0.00 0.00 37.47 3.86
2715 5438 0.465097 CAGTCCATCATGGCCCTCAC 60.465 60.000 0.00 0.00 37.47 3.51
2716 5439 1.524621 GTCCATCATGGCCCTCACG 60.525 63.158 0.00 0.00 37.47 4.35
2717 5440 1.995066 TCCATCATGGCCCTCACGT 60.995 57.895 0.00 0.00 37.47 4.49
2718 5441 1.077501 CCATCATGGCCCTCACGTT 60.078 57.895 0.00 0.00 0.00 3.99
2719 5442 0.680921 CCATCATGGCCCTCACGTTT 60.681 55.000 0.00 0.00 0.00 3.60
2720 5443 0.734889 CATCATGGCCCTCACGTTTC 59.265 55.000 0.00 0.00 0.00 2.78
2721 5444 0.327924 ATCATGGCCCTCACGTTTCA 59.672 50.000 0.00 0.00 0.00 2.69
2722 5445 0.327924 TCATGGCCCTCACGTTTCAT 59.672 50.000 0.00 0.00 0.00 2.57
2723 5446 1.176527 CATGGCCCTCACGTTTCATT 58.823 50.000 0.00 0.00 0.00 2.57
2724 5447 2.026729 TCATGGCCCTCACGTTTCATTA 60.027 45.455 0.00 0.00 0.00 1.90
2725 5448 2.107950 TGGCCCTCACGTTTCATTAG 57.892 50.000 0.00 0.00 0.00 1.73
2726 5449 1.349688 TGGCCCTCACGTTTCATTAGT 59.650 47.619 0.00 0.00 0.00 2.24
2727 5450 2.224670 TGGCCCTCACGTTTCATTAGTT 60.225 45.455 0.00 0.00 0.00 2.24
2728 5451 2.161609 GGCCCTCACGTTTCATTAGTTG 59.838 50.000 0.00 0.00 0.00 3.16
2729 5452 2.812011 GCCCTCACGTTTCATTAGTTGT 59.188 45.455 0.00 0.00 0.00 3.32
2730 5453 3.120304 GCCCTCACGTTTCATTAGTTGTC 60.120 47.826 0.00 0.00 0.00 3.18
2731 5454 4.062293 CCCTCACGTTTCATTAGTTGTCA 58.938 43.478 0.00 0.00 0.00 3.58
2732 5455 4.695455 CCCTCACGTTTCATTAGTTGTCAT 59.305 41.667 0.00 0.00 0.00 3.06
2733 5456 5.181245 CCCTCACGTTTCATTAGTTGTCATT 59.819 40.000 0.00 0.00 0.00 2.57
2734 5457 6.079763 CCTCACGTTTCATTAGTTGTCATTG 58.920 40.000 0.00 0.00 0.00 2.82
2735 5458 5.996219 TCACGTTTCATTAGTTGTCATTGG 58.004 37.500 0.00 0.00 0.00 3.16
2736 5459 5.760743 TCACGTTTCATTAGTTGTCATTGGA 59.239 36.000 0.00 0.00 0.00 3.53
2737 5460 6.261158 TCACGTTTCATTAGTTGTCATTGGAA 59.739 34.615 0.00 0.00 0.00 3.53
2738 5461 7.040755 TCACGTTTCATTAGTTGTCATTGGAAT 60.041 33.333 0.00 0.00 0.00 3.01
2739 5462 7.594758 CACGTTTCATTAGTTGTCATTGGAATT 59.405 33.333 0.00 0.00 0.00 2.17
2740 5463 7.594758 ACGTTTCATTAGTTGTCATTGGAATTG 59.405 33.333 0.00 0.00 0.00 2.32
2741 5464 7.410728 CGTTTCATTAGTTGTCATTGGAATTGC 60.411 37.037 0.00 0.00 0.00 3.56
2742 5465 6.839124 TCATTAGTTGTCATTGGAATTGCT 57.161 33.333 0.00 0.00 0.00 3.91
2743 5466 7.230849 TCATTAGTTGTCATTGGAATTGCTT 57.769 32.000 0.00 0.00 0.00 3.91
2744 5467 8.347004 TCATTAGTTGTCATTGGAATTGCTTA 57.653 30.769 0.00 0.00 0.00 3.09
2745 5468 8.243426 TCATTAGTTGTCATTGGAATTGCTTAC 58.757 33.333 0.00 0.00 0.00 2.34
2746 5469 5.391312 AGTTGTCATTGGAATTGCTTACC 57.609 39.130 0.00 0.00 0.00 2.85
2747 5470 4.832266 AGTTGTCATTGGAATTGCTTACCA 59.168 37.500 0.00 0.00 0.00 3.25
2748 5471 5.304101 AGTTGTCATTGGAATTGCTTACCAA 59.696 36.000 0.00 0.00 45.64 3.67
2749 5472 5.389859 TGTCATTGGAATTGCTTACCAAG 57.610 39.130 0.00 0.00 44.95 3.61
2750 5473 4.832266 TGTCATTGGAATTGCTTACCAAGT 59.168 37.500 0.00 0.00 44.95 3.16
2751 5474 5.048083 TGTCATTGGAATTGCTTACCAAGTC 60.048 40.000 0.00 0.00 45.26 3.01
2755 5478 3.471495 GAATTGCTTACCAAGTCCGTG 57.529 47.619 0.00 0.00 41.41 4.94
2756 5479 2.561478 ATTGCTTACCAAGTCCGTGT 57.439 45.000 0.00 0.00 36.76 4.49
2757 5480 1.873698 TTGCTTACCAAGTCCGTGTC 58.126 50.000 0.00 0.00 0.00 3.67
2758 5481 0.034337 TGCTTACCAAGTCCGTGTCC 59.966 55.000 0.00 0.00 0.00 4.02
2759 5482 0.034337 GCTTACCAAGTCCGTGTCCA 59.966 55.000 0.00 0.00 0.00 4.02
2760 5483 1.541670 GCTTACCAAGTCCGTGTCCAA 60.542 52.381 0.00 0.00 0.00 3.53
2761 5484 2.413837 CTTACCAAGTCCGTGTCCAAG 58.586 52.381 0.00 0.00 0.00 3.61
2762 5485 1.707106 TACCAAGTCCGTGTCCAAGA 58.293 50.000 0.00 0.00 0.00 3.02
2763 5486 0.834612 ACCAAGTCCGTGTCCAAGAA 59.165 50.000 0.00 0.00 0.00 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 7.489160 ACCTTCTTTTTGGACTTGTTGTTATC 58.511 34.615 0.00 0.00 0.00 1.75
21 22 6.844097 ACCTTCTTTTTGGACTTGTTGTTA 57.156 33.333 0.00 0.00 0.00 2.41
23 24 5.478407 CAACCTTCTTTTTGGACTTGTTGT 58.522 37.500 0.00 0.00 0.00 3.32
28 29 2.100749 CGGCAACCTTCTTTTTGGACTT 59.899 45.455 0.00 0.00 0.00 3.01
29 30 1.681264 CGGCAACCTTCTTTTTGGACT 59.319 47.619 0.00 0.00 0.00 3.85
34 35 5.048713 CAGTATTCTCGGCAACCTTCTTTTT 60.049 40.000 0.00 0.00 0.00 1.94
38 39 2.678190 GCAGTATTCTCGGCAACCTTCT 60.678 50.000 0.00 0.00 0.00 2.85
40 41 1.679032 GGCAGTATTCTCGGCAACCTT 60.679 52.381 0.00 0.00 0.00 3.50
46 47 1.883084 CGGTGGCAGTATTCTCGGC 60.883 63.158 0.00 0.00 0.00 5.54
52 53 2.435938 CGTGGCGGTGGCAGTATT 60.436 61.111 0.00 0.00 42.47 1.89
67 68 2.030562 CCAGGTCAAAGCCGTCGT 59.969 61.111 0.00 0.00 0.00 4.34
126 127 1.076332 GCAACTACGGCTAACACAGG 58.924 55.000 0.00 0.00 0.00 4.00
163 164 6.627087 AGCCCATACTAATGTATACTGCAT 57.373 37.500 4.17 0.00 37.28 3.96
166 167 9.371136 CATGTAAGCCCATACTAATGTATACTG 57.629 37.037 4.17 0.00 37.28 2.74
167 168 8.540388 CCATGTAAGCCCATACTAATGTATACT 58.460 37.037 4.17 0.00 37.28 2.12
202 203 7.444183 GGCATTCACAATATTAAGCCAGTACTA 59.556 37.037 0.00 0.00 40.50 1.82
211 212 8.929827 TTGAACATGGCATTCACAATATTAAG 57.070 30.769 0.00 0.00 35.82 1.85
220 221 9.403110 GAAATATATCTTGAACATGGCATTCAC 57.597 33.333 0.00 0.00 35.82 3.18
221 222 9.358406 AGAAATATATCTTGAACATGGCATTCA 57.642 29.630 0.00 0.00 34.27 2.57
268 269 8.713271 GCTTAGAGATCGTTTGATAAATTAGGG 58.287 37.037 0.00 0.00 34.09 3.53
280 281 5.564048 ACGAGTTAGCTTAGAGATCGTTT 57.436 39.130 0.00 0.00 38.65 3.60
307 308 6.624642 GCCATTTGTTTTTGGAGAAAGCAAAA 60.625 34.615 14.35 0.00 34.45 2.44
309 310 4.335037 GCCATTTGTTTTTGGAGAAAGCAA 59.665 37.500 0.00 0.00 34.81 3.91
310 311 3.876320 GCCATTTGTTTTTGGAGAAAGCA 59.124 39.130 0.00 0.00 34.81 3.91
311 312 3.876320 TGCCATTTGTTTTTGGAGAAAGC 59.124 39.130 0.00 0.00 34.81 3.51
312 313 4.874966 TGTGCCATTTGTTTTTGGAGAAAG 59.125 37.500 0.00 0.00 34.81 2.62
378 391 6.630444 AAATGAGACTAAGCATGCATAAGG 57.370 37.500 21.98 4.01 0.00 2.69
385 405 6.678900 GCCTTTGGTAAATGAGACTAAGCATG 60.679 42.308 0.00 0.00 0.00 4.06
469 489 7.276658 TGAGTATGAGGAACTGTTAACAAACA 58.723 34.615 10.03 4.52 41.55 2.83
479 2961 2.363680 AGCGGATGAGTATGAGGAACTG 59.636 50.000 0.00 0.00 41.55 3.16
484 2966 2.363680 AGTTCAGCGGATGAGTATGAGG 59.636 50.000 0.00 0.00 39.68 3.86
497 2981 5.530519 TGCTTCTTATTAACAGTTCAGCG 57.469 39.130 0.00 0.00 0.00 5.18
517 3001 5.750547 TGATTCTCTTTCTCGTCACATATGC 59.249 40.000 1.58 0.00 0.00 3.14
578 3062 6.017275 CCTTTCAACAGAGCATTCATATCTCC 60.017 42.308 0.00 0.00 0.00 3.71
625 3114 2.925306 GCATTTCTTTGCAGCACTCAGG 60.925 50.000 0.00 0.00 42.31 3.86
694 3192 3.364366 GCAAAGGTTCGTCTCATCAAGTG 60.364 47.826 0.00 0.00 0.00 3.16
933 3472 2.721797 CGTACGTGTTGATGCTTGCTTC 60.722 50.000 7.22 2.12 0.00 3.86
1488 4111 8.948631 ATGTGATGTTGACCTACAGTAATTAG 57.051 34.615 0.00 0.00 0.00 1.73
1497 4120 6.127810 TCGTAGTATGTGATGTTGACCTAC 57.872 41.667 0.00 0.00 0.00 3.18
1501 4124 6.183360 TGCAATTCGTAGTATGTGATGTTGAC 60.183 38.462 0.00 0.00 0.00 3.18
1519 4153 9.415544 GATGATTAGATGGGTTAATTGCAATTC 57.584 33.333 27.28 14.36 0.00 2.17
1549 4189 5.703130 TGTACCACATGAAACGATCATTCAA 59.297 36.000 13.19 0.83 46.85 2.69
1715 4363 0.690762 TCCTGTACACCTGCTTTCCC 59.309 55.000 0.00 0.00 0.00 3.97
1871 4570 0.534427 GGCTTATTGTAGGGACGCCC 60.534 60.000 6.80 6.80 45.90 6.13
2001 4721 3.436704 CACGGGTTGACGACTAGTTACTA 59.563 47.826 0.00 0.00 37.61 1.82
2002 4722 2.227388 CACGGGTTGACGACTAGTTACT 59.773 50.000 0.00 0.00 37.61 2.24
2003 4723 2.589014 CACGGGTTGACGACTAGTTAC 58.411 52.381 0.00 0.00 37.61 2.50
2004 4724 1.068333 GCACGGGTTGACGACTAGTTA 60.068 52.381 0.00 0.00 37.61 2.24
2005 4725 0.319297 GCACGGGTTGACGACTAGTT 60.319 55.000 0.00 0.00 37.61 2.24
2006 4726 1.288127 GCACGGGTTGACGACTAGT 59.712 57.895 0.00 0.00 37.61 2.57
2007 4727 0.108804 ATGCACGGGTTGACGACTAG 60.109 55.000 0.00 0.00 37.61 2.57
2033 4753 2.592102 AGAAGAGCAATTCCAAGCCA 57.408 45.000 0.00 0.00 0.00 4.75
2055 4775 7.769220 TCTGGACTTACGCTATATATAAAGGC 58.231 38.462 6.78 3.92 0.00 4.35
2060 4780 9.910267 TTGGTATCTGGACTTACGCTATATATA 57.090 33.333 0.00 0.00 0.00 0.86
2061 4781 8.818622 TTGGTATCTGGACTTACGCTATATAT 57.181 34.615 0.00 0.00 0.00 0.86
2062 4782 8.818622 ATTGGTATCTGGACTTACGCTATATA 57.181 34.615 0.00 0.00 0.00 0.86
2063 4783 7.719871 ATTGGTATCTGGACTTACGCTATAT 57.280 36.000 0.00 0.00 0.00 0.86
2093 4813 1.012486 GCACGAGACGGGTTACCTTG 61.012 60.000 0.00 0.00 30.42 3.61
2105 4825 7.122055 AGGGAAATATTTTGTTAATGCACGAGA 59.878 33.333 1.43 0.00 0.00 4.04
2109 4829 7.327214 TGGAGGGAAATATTTTGTTAATGCAC 58.673 34.615 1.43 0.00 0.00 4.57
2161 4881 6.604735 TTTCTGACTGCACTAAAGAAGAAC 57.395 37.500 0.00 0.00 0.00 3.01
2178 4898 7.218614 TCGAGTTTAACCCTTTGTATTTCTGA 58.781 34.615 0.00 0.00 0.00 3.27
2187 4907 3.473625 ACCACTCGAGTTTAACCCTTTG 58.526 45.455 17.26 0.00 0.00 2.77
2195 4915 8.928733 GTCATATTTACAAACCACTCGAGTTTA 58.071 33.333 17.26 0.00 35.71 2.01
2202 4922 6.751888 GCAATGGTCATATTTACAAACCACTC 59.248 38.462 0.00 0.00 42.44 3.51
2220 4940 5.704354 TGGGATATGAATGTTAGCAATGGT 58.296 37.500 0.00 0.00 0.00 3.55
2322 5042 9.410556 GTTGTCATACTGTAATTGAAAGCAAAT 57.589 29.630 0.00 0.00 37.59 2.32
2342 5062 6.621316 TTTTAGGCATCGTTAAAGTTGTCA 57.379 33.333 6.80 0.00 0.00 3.58
2385 5105 5.410439 CCATAGCATGACATGATTCGAATGA 59.590 40.000 16.96 7.77 0.00 2.57
2524 5247 9.520515 AGAACTATGAAAGCTTCCATCTTTTAA 57.479 29.630 0.00 0.00 34.24 1.52
2525 5248 9.167311 GAGAACTATGAAAGCTTCCATCTTTTA 57.833 33.333 0.00 0.00 34.24 1.52
2526 5249 7.121907 GGAGAACTATGAAAGCTTCCATCTTTT 59.878 37.037 0.00 0.00 34.24 2.27
2527 5250 6.601217 GGAGAACTATGAAAGCTTCCATCTTT 59.399 38.462 0.00 0.00 36.55 2.52
2528 5251 6.118852 GGAGAACTATGAAAGCTTCCATCTT 58.881 40.000 0.00 0.00 0.00 2.40
2529 5252 5.190528 TGGAGAACTATGAAAGCTTCCATCT 59.809 40.000 0.00 0.00 31.14 2.90
2530 5253 5.431765 TGGAGAACTATGAAAGCTTCCATC 58.568 41.667 0.00 0.00 31.14 3.51
2531 5254 5.441718 TGGAGAACTATGAAAGCTTCCAT 57.558 39.130 2.90 2.90 31.14 3.41
2532 5255 4.908601 TGGAGAACTATGAAAGCTTCCA 57.091 40.909 0.00 0.00 32.72 3.53
2533 5256 6.995091 ACATATGGAGAACTATGAAAGCTTCC 59.005 38.462 7.80 0.00 0.00 3.46
2534 5257 8.443953 AACATATGGAGAACTATGAAAGCTTC 57.556 34.615 7.80 0.00 0.00 3.86
2535 5258 9.331282 GTAACATATGGAGAACTATGAAAGCTT 57.669 33.333 7.80 0.00 0.00 3.74
2536 5259 7.934120 GGTAACATATGGAGAACTATGAAAGCT 59.066 37.037 7.80 0.00 0.00 3.74
2537 5260 7.173390 GGGTAACATATGGAGAACTATGAAAGC 59.827 40.741 7.80 0.00 39.74 3.51
2538 5261 7.661847 GGGGTAACATATGGAGAACTATGAAAG 59.338 40.741 7.80 0.00 39.74 2.62
2539 5262 7.349859 AGGGGTAACATATGGAGAACTATGAAA 59.650 37.037 7.80 0.00 39.74 2.69
2540 5263 6.849697 AGGGGTAACATATGGAGAACTATGAA 59.150 38.462 7.80 0.00 39.74 2.57
2541 5264 6.390504 AGGGGTAACATATGGAGAACTATGA 58.609 40.000 7.80 0.00 39.74 2.15
2542 5265 6.688073 AGGGGTAACATATGGAGAACTATG 57.312 41.667 7.80 0.00 39.74 2.23
2543 5266 7.707467 AAAGGGGTAACATATGGAGAACTAT 57.293 36.000 7.80 0.00 39.74 2.12
2544 5267 8.808240 ATAAAGGGGTAACATATGGAGAACTA 57.192 34.615 7.80 0.00 39.74 2.24
2545 5268 7.707467 ATAAAGGGGTAACATATGGAGAACT 57.293 36.000 7.80 0.00 39.74 3.01
2546 5269 9.668497 GATATAAAGGGGTAACATATGGAGAAC 57.332 37.037 7.80 0.00 39.74 3.01
2547 5270 8.832735 GGATATAAAGGGGTAACATATGGAGAA 58.167 37.037 7.80 0.00 39.74 2.87
2548 5271 7.125204 CGGATATAAAGGGGTAACATATGGAGA 59.875 40.741 7.80 0.00 39.74 3.71
2549 5272 7.093024 ACGGATATAAAGGGGTAACATATGGAG 60.093 40.741 7.80 0.00 39.74 3.86
2550 5273 6.731919 ACGGATATAAAGGGGTAACATATGGA 59.268 38.462 7.80 0.00 39.74 3.41
2551 5274 6.954232 ACGGATATAAAGGGGTAACATATGG 58.046 40.000 7.80 0.00 39.74 2.74
2552 5275 8.098286 TCAACGGATATAAAGGGGTAACATATG 58.902 37.037 0.00 0.00 39.74 1.78
2553 5276 8.209802 TCAACGGATATAAAGGGGTAACATAT 57.790 34.615 0.00 0.00 39.74 1.78
2554 5277 7.615039 TCAACGGATATAAAGGGGTAACATA 57.385 36.000 0.00 0.00 39.74 2.29
2555 5278 6.503560 TCAACGGATATAAAGGGGTAACAT 57.496 37.500 0.00 0.00 39.74 2.71
2556 5279 5.954153 TCAACGGATATAAAGGGGTAACA 57.046 39.130 0.00 0.00 39.74 2.41
2557 5280 7.812690 AAATCAACGGATATAAAGGGGTAAC 57.187 36.000 0.00 0.00 32.09 2.50
2558 5281 7.285858 CCAAAATCAACGGATATAAAGGGGTAA 59.714 37.037 0.00 0.00 32.09 2.85
2559 5282 6.773685 CCAAAATCAACGGATATAAAGGGGTA 59.226 38.462 0.00 0.00 32.09 3.69
2560 5283 5.596772 CCAAAATCAACGGATATAAAGGGGT 59.403 40.000 0.00 0.00 32.09 4.95
2561 5284 5.010617 CCCAAAATCAACGGATATAAAGGGG 59.989 44.000 0.00 0.00 32.09 4.79
2562 5285 5.596772 ACCCAAAATCAACGGATATAAAGGG 59.403 40.000 0.00 0.00 34.25 3.95
2563 5286 6.709018 ACCCAAAATCAACGGATATAAAGG 57.291 37.500 0.00 0.00 32.09 3.11
2564 5287 8.899771 ACTAACCCAAAATCAACGGATATAAAG 58.100 33.333 0.00 0.00 32.09 1.85
2565 5288 8.810990 ACTAACCCAAAATCAACGGATATAAA 57.189 30.769 0.00 0.00 32.09 1.40
2566 5289 8.047911 TGACTAACCCAAAATCAACGGATATAA 58.952 33.333 0.00 0.00 32.09 0.98
2567 5290 7.566569 TGACTAACCCAAAATCAACGGATATA 58.433 34.615 0.00 0.00 32.09 0.86
2568 5291 6.419791 TGACTAACCCAAAATCAACGGATAT 58.580 36.000 0.00 0.00 32.09 1.63
2569 5292 5.806818 TGACTAACCCAAAATCAACGGATA 58.193 37.500 0.00 0.00 32.09 2.59
2570 5293 4.658063 TGACTAACCCAAAATCAACGGAT 58.342 39.130 0.00 0.00 34.43 4.18
2571 5294 4.088056 TGACTAACCCAAAATCAACGGA 57.912 40.909 0.00 0.00 0.00 4.69
2572 5295 6.503589 TTATGACTAACCCAAAATCAACGG 57.496 37.500 0.00 0.00 0.00 4.44
2580 5303 8.637986 GCCATCAATATTTATGACTAACCCAAA 58.362 33.333 10.59 0.00 0.00 3.28
2581 5304 8.004215 AGCCATCAATATTTATGACTAACCCAA 58.996 33.333 10.59 0.00 0.00 4.12
2582 5305 7.448161 CAGCCATCAATATTTATGACTAACCCA 59.552 37.037 10.59 0.00 0.00 4.51
2583 5306 7.094205 CCAGCCATCAATATTTATGACTAACCC 60.094 40.741 10.59 0.00 0.00 4.11
2584 5307 7.094205 CCCAGCCATCAATATTTATGACTAACC 60.094 40.741 10.59 0.00 0.00 2.85
2585 5308 7.665559 TCCCAGCCATCAATATTTATGACTAAC 59.334 37.037 10.59 0.00 0.00 2.34
2586 5309 7.754624 TCCCAGCCATCAATATTTATGACTAA 58.245 34.615 10.59 0.00 0.00 2.24
2587 5310 7.328404 TCCCAGCCATCAATATTTATGACTA 57.672 36.000 10.59 0.00 0.00 2.59
2588 5311 6.204852 TCCCAGCCATCAATATTTATGACT 57.795 37.500 10.59 2.35 0.00 3.41
2589 5312 7.472334 AATCCCAGCCATCAATATTTATGAC 57.528 36.000 10.59 0.06 0.00 3.06
2590 5313 9.599056 TTAAATCCCAGCCATCAATATTTATGA 57.401 29.630 10.59 0.00 0.00 2.15
2591 5314 9.643693 GTTAAATCCCAGCCATCAATATTTATG 57.356 33.333 3.07 3.07 0.00 1.90
2592 5315 9.378504 TGTTAAATCCCAGCCATCAATATTTAT 57.621 29.630 0.00 0.00 0.00 1.40
2593 5316 8.774546 TGTTAAATCCCAGCCATCAATATTTA 57.225 30.769 0.00 0.00 0.00 1.40
2594 5317 7.564660 TCTGTTAAATCCCAGCCATCAATATTT 59.435 33.333 0.00 0.00 0.00 1.40
2595 5318 7.068702 TCTGTTAAATCCCAGCCATCAATATT 58.931 34.615 0.00 0.00 0.00 1.28
2596 5319 6.613699 TCTGTTAAATCCCAGCCATCAATAT 58.386 36.000 0.00 0.00 0.00 1.28
2597 5320 6.012337 TCTGTTAAATCCCAGCCATCAATA 57.988 37.500 0.00 0.00 0.00 1.90
2598 5321 4.870636 TCTGTTAAATCCCAGCCATCAAT 58.129 39.130 0.00 0.00 0.00 2.57
2599 5322 4.314522 TCTGTTAAATCCCAGCCATCAA 57.685 40.909 0.00 0.00 0.00 2.57
2600 5323 4.524802 ATCTGTTAAATCCCAGCCATCA 57.475 40.909 0.00 0.00 0.00 3.07
2601 5324 6.959639 TTTATCTGTTAAATCCCAGCCATC 57.040 37.500 0.00 0.00 0.00 3.51
2603 5326 9.515226 GTATATTTATCTGTTAAATCCCAGCCA 57.485 33.333 6.92 0.00 40.29 4.75
2604 5327 8.957466 GGTATATTTATCTGTTAAATCCCAGCC 58.043 37.037 6.92 2.65 40.29 4.85
2605 5328 9.740710 AGGTATATTTATCTGTTAAATCCCAGC 57.259 33.333 6.92 4.76 40.29 4.85
2622 5345 7.611855 GCCTGGTGCATCTAAATAGGTATATTT 59.388 37.037 0.00 0.00 40.94 1.40
2623 5346 7.037297 AGCCTGGTGCATCTAAATAGGTATATT 60.037 37.037 0.00 0.00 44.83 1.28
2624 5347 6.445139 AGCCTGGTGCATCTAAATAGGTATAT 59.555 38.462 0.00 0.00 44.83 0.86
2625 5348 5.785423 AGCCTGGTGCATCTAAATAGGTATA 59.215 40.000 0.00 0.00 44.83 1.47
2626 5349 4.599241 AGCCTGGTGCATCTAAATAGGTAT 59.401 41.667 0.00 0.00 44.83 2.73
2627 5350 3.973973 AGCCTGGTGCATCTAAATAGGTA 59.026 43.478 0.00 0.00 44.83 3.08
2628 5351 2.780010 AGCCTGGTGCATCTAAATAGGT 59.220 45.455 0.00 0.00 44.83 3.08
2629 5352 3.498774 AGCCTGGTGCATCTAAATAGG 57.501 47.619 0.00 0.00 44.83 2.57
2630 5353 4.274459 GTCAAGCCTGGTGCATCTAAATAG 59.726 45.833 0.00 0.00 44.83 1.73
2631 5354 4.199310 GTCAAGCCTGGTGCATCTAAATA 58.801 43.478 0.00 0.00 44.83 1.40
2632 5355 3.019564 GTCAAGCCTGGTGCATCTAAAT 58.980 45.455 0.00 0.00 44.83 1.40
2633 5356 2.224744 TGTCAAGCCTGGTGCATCTAAA 60.225 45.455 0.00 0.00 44.83 1.85
2634 5357 1.350684 TGTCAAGCCTGGTGCATCTAA 59.649 47.619 0.00 0.00 44.83 2.10
2635 5358 0.983467 TGTCAAGCCTGGTGCATCTA 59.017 50.000 0.00 0.00 44.83 1.98
2636 5359 0.111061 TTGTCAAGCCTGGTGCATCT 59.889 50.000 0.00 0.00 44.83 2.90
2637 5360 0.242017 GTTGTCAAGCCTGGTGCATC 59.758 55.000 0.00 0.00 44.83 3.91
2638 5361 0.467844 TGTTGTCAAGCCTGGTGCAT 60.468 50.000 0.00 0.00 44.83 3.96
2639 5362 0.682532 TTGTTGTCAAGCCTGGTGCA 60.683 50.000 0.00 0.00 44.83 4.57
2640 5363 0.675633 ATTGTTGTCAAGCCTGGTGC 59.324 50.000 0.00 0.00 36.97 5.01
2641 5364 3.457610 AAATTGTTGTCAAGCCTGGTG 57.542 42.857 0.00 0.00 36.97 4.17
2642 5365 5.806654 ATAAAATTGTTGTCAAGCCTGGT 57.193 34.783 0.00 0.00 36.97 4.00
2643 5366 5.639082 GGAATAAAATTGTTGTCAAGCCTGG 59.361 40.000 0.00 0.00 36.97 4.45
2644 5367 6.222389 TGGAATAAAATTGTTGTCAAGCCTG 58.778 36.000 0.00 0.00 36.97 4.85
2645 5368 6.418057 TGGAATAAAATTGTTGTCAAGCCT 57.582 33.333 0.00 0.00 36.97 4.58
2646 5369 6.147656 CCTTGGAATAAAATTGTTGTCAAGCC 59.852 38.462 0.00 0.00 36.97 4.35
2647 5370 6.705825 ACCTTGGAATAAAATTGTTGTCAAGC 59.294 34.615 0.00 0.00 36.97 4.01
2648 5371 7.710475 ACACCTTGGAATAAAATTGTTGTCAAG 59.290 33.333 0.00 0.00 36.97 3.02
2649 5372 7.560368 ACACCTTGGAATAAAATTGTTGTCAA 58.440 30.769 0.00 0.00 37.98 3.18
2650 5373 7.118496 ACACCTTGGAATAAAATTGTTGTCA 57.882 32.000 0.00 0.00 0.00 3.58
2653 5376 9.284594 CGTATACACCTTGGAATAAAATTGTTG 57.715 33.333 3.32 0.00 0.00 3.33
2654 5377 8.463607 CCGTATACACCTTGGAATAAAATTGTT 58.536 33.333 3.32 0.00 0.00 2.83
2655 5378 7.415877 GCCGTATACACCTTGGAATAAAATTGT 60.416 37.037 3.32 0.00 0.00 2.71
2656 5379 6.915843 GCCGTATACACCTTGGAATAAAATTG 59.084 38.462 3.32 0.00 0.00 2.32
2657 5380 6.831868 AGCCGTATACACCTTGGAATAAAATT 59.168 34.615 3.32 0.00 0.00 1.82
2658 5381 6.262273 CAGCCGTATACACCTTGGAATAAAAT 59.738 38.462 3.32 0.00 0.00 1.82
2659 5382 5.587043 CAGCCGTATACACCTTGGAATAAAA 59.413 40.000 3.32 0.00 0.00 1.52
2660 5383 5.120399 CAGCCGTATACACCTTGGAATAAA 58.880 41.667 3.32 0.00 0.00 1.40
2661 5384 4.443739 CCAGCCGTATACACCTTGGAATAA 60.444 45.833 3.32 0.00 0.00 1.40
2662 5385 3.070446 CCAGCCGTATACACCTTGGAATA 59.930 47.826 3.32 0.00 0.00 1.75
2663 5386 2.158813 CCAGCCGTATACACCTTGGAAT 60.159 50.000 3.32 0.00 0.00 3.01
2664 5387 1.208535 CCAGCCGTATACACCTTGGAA 59.791 52.381 3.32 0.00 0.00 3.53
2665 5388 0.828022 CCAGCCGTATACACCTTGGA 59.172 55.000 3.32 0.00 0.00 3.53
2666 5389 0.814010 GCCAGCCGTATACACCTTGG 60.814 60.000 3.32 6.08 0.00 3.61
2667 5390 0.107897 TGCCAGCCGTATACACCTTG 60.108 55.000 3.32 0.00 0.00 3.61
2668 5391 0.616371 TTGCCAGCCGTATACACCTT 59.384 50.000 3.32 0.00 0.00 3.50
2669 5392 0.178068 CTTGCCAGCCGTATACACCT 59.822 55.000 3.32 0.00 0.00 4.00
2670 5393 0.107848 ACTTGCCAGCCGTATACACC 60.108 55.000 3.32 0.00 0.00 4.16
2671 5394 2.589798 TACTTGCCAGCCGTATACAC 57.410 50.000 3.32 0.00 0.00 2.90
2672 5395 2.419021 GGTTACTTGCCAGCCGTATACA 60.419 50.000 3.32 0.00 0.00 2.29
2673 5396 2.207590 GGTTACTTGCCAGCCGTATAC 58.792 52.381 0.00 0.00 0.00 1.47
2674 5397 1.832366 TGGTTACTTGCCAGCCGTATA 59.168 47.619 0.00 0.00 0.00 1.47
2675 5398 0.616371 TGGTTACTTGCCAGCCGTAT 59.384 50.000 0.00 0.00 0.00 3.06
2676 5399 0.397187 TTGGTTACTTGCCAGCCGTA 59.603 50.000 0.00 0.00 37.31 4.02
2677 5400 1.149627 TTGGTTACTTGCCAGCCGT 59.850 52.632 0.00 0.00 37.31 5.68
2678 5401 1.169661 TGTTGGTTACTTGCCAGCCG 61.170 55.000 0.00 0.00 36.56 5.52
2679 5402 0.598065 CTGTTGGTTACTTGCCAGCC 59.402 55.000 0.00 0.00 36.56 4.85
2680 5403 1.266989 GACTGTTGGTTACTTGCCAGC 59.733 52.381 0.00 0.00 37.31 4.85
2681 5404 1.880027 GGACTGTTGGTTACTTGCCAG 59.120 52.381 0.00 0.00 37.31 4.85
2682 5405 1.213182 TGGACTGTTGGTTACTTGCCA 59.787 47.619 0.00 0.00 0.00 4.92
2683 5406 1.975660 TGGACTGTTGGTTACTTGCC 58.024 50.000 0.00 0.00 0.00 4.52
2684 5407 3.146066 TGATGGACTGTTGGTTACTTGC 58.854 45.455 0.00 0.00 0.00 4.01
2685 5408 4.156556 CCATGATGGACTGTTGGTTACTTG 59.843 45.833 5.27 0.00 40.96 3.16
2686 5409 4.335416 CCATGATGGACTGTTGGTTACTT 58.665 43.478 5.27 0.00 40.96 2.24
2687 5410 3.873801 GCCATGATGGACTGTTGGTTACT 60.874 47.826 17.22 0.00 40.96 2.24
2688 5411 2.423538 GCCATGATGGACTGTTGGTTAC 59.576 50.000 17.22 0.00 40.96 2.50
2689 5412 2.620367 GGCCATGATGGACTGTTGGTTA 60.620 50.000 17.22 0.00 44.12 2.85
2690 5413 1.549203 GCCATGATGGACTGTTGGTT 58.451 50.000 17.22 0.00 40.96 3.67
2691 5414 0.323725 GGCCATGATGGACTGTTGGT 60.324 55.000 17.22 0.00 44.12 3.67
2692 5415 2.496942 GGCCATGATGGACTGTTGG 58.503 57.895 17.22 0.00 44.12 3.77
2699 5422 1.561769 AACGTGAGGGCCATGATGGA 61.562 55.000 17.22 0.00 40.96 3.41
2700 5423 0.680921 AAACGTGAGGGCCATGATGG 60.681 55.000 7.21 7.21 41.55 3.51
2701 5424 0.734889 GAAACGTGAGGGCCATGATG 59.265 55.000 6.18 0.00 35.74 3.07
2702 5425 0.327924 TGAAACGTGAGGGCCATGAT 59.672 50.000 6.18 0.00 35.74 2.45
2703 5426 0.327924 ATGAAACGTGAGGGCCATGA 59.672 50.000 6.18 0.00 35.74 3.07
2704 5427 1.176527 AATGAAACGTGAGGGCCATG 58.823 50.000 6.18 0.00 37.78 3.66
2705 5428 2.026262 ACTAATGAAACGTGAGGGCCAT 60.026 45.455 6.18 0.00 0.00 4.40
2706 5429 1.349688 ACTAATGAAACGTGAGGGCCA 59.650 47.619 6.18 0.00 0.00 5.36
2707 5430 2.109425 ACTAATGAAACGTGAGGGCC 57.891 50.000 0.00 0.00 0.00 5.80
2708 5431 2.812011 ACAACTAATGAAACGTGAGGGC 59.188 45.455 0.00 0.00 0.00 5.19
2709 5432 4.062293 TGACAACTAATGAAACGTGAGGG 58.938 43.478 0.00 0.00 0.00 4.30
2710 5433 5.862924 ATGACAACTAATGAAACGTGAGG 57.137 39.130 0.00 0.00 0.00 3.86
2711 5434 6.073276 TCCAATGACAACTAATGAAACGTGAG 60.073 38.462 0.00 0.00 0.00 3.51
2712 5435 5.760743 TCCAATGACAACTAATGAAACGTGA 59.239 36.000 0.00 0.00 0.00 4.35
2713 5436 5.996219 TCCAATGACAACTAATGAAACGTG 58.004 37.500 0.00 0.00 0.00 4.49
2714 5437 6.627395 TTCCAATGACAACTAATGAAACGT 57.373 33.333 0.00 0.00 0.00 3.99
2715 5438 7.410728 GCAATTCCAATGACAACTAATGAAACG 60.411 37.037 0.00 0.00 0.00 3.60
2716 5439 7.599998 AGCAATTCCAATGACAACTAATGAAAC 59.400 33.333 0.00 0.00 0.00 2.78
2717 5440 7.669427 AGCAATTCCAATGACAACTAATGAAA 58.331 30.769 0.00 0.00 0.00 2.69
2718 5441 7.230849 AGCAATTCCAATGACAACTAATGAA 57.769 32.000 0.00 0.00 0.00 2.57
2719 5442 6.839124 AGCAATTCCAATGACAACTAATGA 57.161 33.333 0.00 0.00 0.00 2.57
2720 5443 7.489113 GGTAAGCAATTCCAATGACAACTAATG 59.511 37.037 0.00 0.00 0.00 1.90
2721 5444 7.178274 TGGTAAGCAATTCCAATGACAACTAAT 59.822 33.333 0.00 0.00 0.00 1.73
2722 5445 6.491745 TGGTAAGCAATTCCAATGACAACTAA 59.508 34.615 0.00 0.00 0.00 2.24
2723 5446 6.007076 TGGTAAGCAATTCCAATGACAACTA 58.993 36.000 0.00 0.00 0.00 2.24
2724 5447 4.832266 TGGTAAGCAATTCCAATGACAACT 59.168 37.500 0.00 0.00 0.00 3.16
2725 5448 5.132897 TGGTAAGCAATTCCAATGACAAC 57.867 39.130 0.00 0.00 0.00 3.32
2726 5449 5.304101 ACTTGGTAAGCAATTCCAATGACAA 59.696 36.000 1.96 0.00 39.91 3.18
2727 5450 4.832266 ACTTGGTAAGCAATTCCAATGACA 59.168 37.500 1.96 0.00 39.91 3.58
2728 5451 5.391312 ACTTGGTAAGCAATTCCAATGAC 57.609 39.130 1.96 0.00 39.91 3.06
2729 5452 4.462483 GGACTTGGTAAGCAATTCCAATGA 59.538 41.667 0.00 0.00 39.91 2.57
2730 5453 4.675146 CGGACTTGGTAAGCAATTCCAATG 60.675 45.833 0.00 2.09 39.91 2.82
2731 5454 3.443681 CGGACTTGGTAAGCAATTCCAAT 59.556 43.478 0.00 0.00 39.91 3.16
2732 5455 2.817258 CGGACTTGGTAAGCAATTCCAA 59.183 45.455 0.00 3.33 38.65 3.53
2733 5456 2.224670 ACGGACTTGGTAAGCAATTCCA 60.225 45.455 0.00 0.00 32.83 3.53
2734 5457 2.161609 CACGGACTTGGTAAGCAATTCC 59.838 50.000 0.00 0.00 0.00 3.01
2735 5458 2.812011 ACACGGACTTGGTAAGCAATTC 59.188 45.455 0.00 0.00 0.00 2.17
2736 5459 2.812011 GACACGGACTTGGTAAGCAATT 59.188 45.455 0.00 0.00 0.00 2.32
2737 5460 2.423577 GACACGGACTTGGTAAGCAAT 58.576 47.619 0.00 0.00 0.00 3.56
2738 5461 1.541670 GGACACGGACTTGGTAAGCAA 60.542 52.381 0.00 0.00 0.00 3.91
2739 5462 0.034337 GGACACGGACTTGGTAAGCA 59.966 55.000 0.00 0.00 0.00 3.91
2740 5463 0.034337 TGGACACGGACTTGGTAAGC 59.966 55.000 0.00 0.00 0.00 3.09
2741 5464 2.036733 TCTTGGACACGGACTTGGTAAG 59.963 50.000 0.00 0.00 0.00 2.34
2742 5465 2.040939 TCTTGGACACGGACTTGGTAA 58.959 47.619 0.00 0.00 0.00 2.85
2743 5466 1.707106 TCTTGGACACGGACTTGGTA 58.293 50.000 0.00 0.00 0.00 3.25
2744 5467 0.834612 TTCTTGGACACGGACTTGGT 59.165 50.000 0.00 0.00 0.00 3.67
2745 5468 3.698250 TTCTTGGACACGGACTTGG 57.302 52.632 0.00 0.00 0.00 3.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.