Multiple sequence alignment - TraesCS3A01G508300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G508300 chr3A 100.000 4754 0 0 1 4754 729579784 729575031 0.000000e+00 8780.0
1 TraesCS3A01G508300 chr3A 94.361 2979 91 32 840 3771 729182378 729185326 0.000000e+00 4499.0
2 TraesCS3A01G508300 chr3A 96.134 983 31 2 3774 4754 729185362 729186339 0.000000e+00 1598.0
3 TraesCS3A01G508300 chr3A 94.014 1019 42 8 2656 3661 729353233 729354245 0.000000e+00 1526.0
4 TraesCS3A01G508300 chr3A 92.500 120 9 0 3657 3776 729356330 729356449 6.330000e-39 172.0
5 TraesCS3A01G508300 chr3A 86.066 122 16 1 4499 4620 369461371 369461251 3.860000e-26 130.0
6 TraesCS3A01G508300 chr3A 87.000 100 12 1 4498 4597 585433562 585433464 1.400000e-20 111.0
7 TraesCS3A01G508300 chr3B 92.488 3022 117 41 1075 4023 807078914 807081898 0.000000e+00 4222.0
8 TraesCS3A01G508300 chr3B 96.322 734 22 1 4021 4754 807081973 807082701 0.000000e+00 1201.0
9 TraesCS3A01G508300 chr3B 77.149 442 64 20 822 1249 807187236 807186818 6.190000e-54 222.0
10 TraesCS3A01G508300 chr3B 89.011 91 3 3 2307 2390 257512492 257512402 6.510000e-19 106.0
11 TraesCS3A01G508300 chr3D 95.125 923 38 3 2861 3776 599165151 599166073 0.000000e+00 1448.0
12 TraesCS3A01G508300 chr3D 93.333 510 30 2 1802 2311 599164610 599165115 0.000000e+00 750.0
13 TraesCS3A01G508300 chr3D 92.089 316 19 4 1075 1384 599163907 599164222 1.570000e-119 440.0
14 TraesCS3A01G508300 chr3D 89.823 226 18 2 1461 1686 599164254 599164474 7.790000e-73 285.0
15 TraesCS3A01G508300 chr3D 81.643 207 29 9 381 585 356951703 356951902 3.810000e-36 163.0
16 TraesCS3A01G508300 chr5B 81.749 526 64 17 3993 4490 11149115 11148594 1.230000e-110 411.0
17 TraesCS3A01G508300 chr5B 81.188 202 32 6 406 602 369331160 369330960 1.770000e-34 158.0
18 TraesCS3A01G508300 chr7A 82.609 207 26 10 401 599 4589097 4589301 1.760000e-39 174.0
19 TraesCS3A01G508300 chr7D 82.514 183 28 3 381 561 618984683 618984503 1.770000e-34 158.0
20 TraesCS3A01G508300 chr7D 79.535 215 29 13 383 592 458518605 458518401 6.420000e-29 139.0
21 TraesCS3A01G508300 chr7D 94.444 54 2 1 652 705 528881942 528881890 1.100000e-11 82.4
22 TraesCS3A01G508300 chr7D 78.862 123 23 3 4499 4620 524553858 524553978 3.940000e-11 80.5
23 TraesCS3A01G508300 chr2A 83.333 168 18 7 3967 4131 578905614 578905774 3.830000e-31 147.0
24 TraesCS3A01G508300 chr2A 82.500 120 13 7 485 599 617697107 617697223 1.090000e-16 99.0
25 TraesCS3A01G508300 chr2A 100.000 33 0 0 669 701 617439978 617439946 1.430000e-05 62.1
26 TraesCS3A01G508300 chr2B 90.741 108 8 1 405 510 52862329 52862222 4.960000e-30 143.0
27 TraesCS3A01G508300 chr2B 88.764 89 6 4 2298 2383 168852032 168851945 6.510000e-19 106.0
28 TraesCS3A01G508300 chr2B 93.750 48 3 0 657 704 101069389 101069436 6.600000e-09 73.1
29 TraesCS3A01G508300 chr2B 96.970 33 1 0 669 701 555849427 555849395 6.650000e-04 56.5
30 TraesCS3A01G508300 chr1D 79.695 197 29 8 4263 4451 370311226 370311419 1.070000e-26 132.0
31 TraesCS3A01G508300 chr6B 79.793 193 26 12 401 584 30284228 30284040 1.390000e-25 128.0
32 TraesCS3A01G508300 chr5D 97.143 70 0 2 2310 2377 546839010 546838941 3.010000e-22 117.0
33 TraesCS3A01G508300 chr7B 77.835 194 34 9 413 599 583173203 583173394 1.400000e-20 111.0
34 TraesCS3A01G508300 chr6A 77.778 198 33 8 406 599 466086453 466086643 1.400000e-20 111.0
35 TraesCS3A01G508300 chr1A 92.405 79 4 2 2306 2383 24740562 24740639 1.400000e-20 111.0
36 TraesCS3A01G508300 chr1A 91.463 82 4 3 2304 2383 24610948 24611028 5.030000e-20 110.0
37 TraesCS3A01G508300 chr1A 90.361 83 5 3 2303 2383 24591517 24591598 6.510000e-19 106.0
38 TraesCS3A01G508300 chr1A 90.244 82 6 2 2303 2383 24759786 24759866 6.510000e-19 106.0
39 TraesCS3A01G508300 chr4D 88.889 90 8 2 2299 2386 43548860 43548949 5.030000e-20 110.0
40 TraesCS3A01G508300 chr4D 92.593 54 4 0 652 705 22570484 22570431 1.420000e-10 78.7
41 TraesCS3A01G508300 chr4D 100.000 30 0 0 26 55 134683936 134683907 6.650000e-04 56.5
42 TraesCS3A01G508300 chr2D 95.833 48 2 0 657 704 64731436 64731483 1.420000e-10 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G508300 chr3A 729575031 729579784 4753 True 8780.00 8780 100.0000 1 4754 1 chr3A.!!$R3 4753
1 TraesCS3A01G508300 chr3A 729182378 729186339 3961 False 3048.50 4499 95.2475 840 4754 2 chr3A.!!$F1 3914
2 TraesCS3A01G508300 chr3A 729353233 729356449 3216 False 849.00 1526 93.2570 2656 3776 2 chr3A.!!$F2 1120
3 TraesCS3A01G508300 chr3B 807078914 807082701 3787 False 2711.50 4222 94.4050 1075 4754 2 chr3B.!!$F1 3679
4 TraesCS3A01G508300 chr3D 599163907 599166073 2166 False 730.75 1448 92.5925 1075 3776 4 chr3D.!!$F2 2701
5 TraesCS3A01G508300 chr5B 11148594 11149115 521 True 411.00 411 81.7490 3993 4490 1 chr5B.!!$R1 497

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
845 846 0.030235 TCGTGTCCGAGTCTTGTGTG 59.970 55.0 0.00 0.0 38.40 3.82 F
897 898 0.248289 TTTCGGCCCGGAGTAGAAAG 59.752 55.0 0.73 0.0 0.00 2.62 F
957 958 0.254747 TGCCCCTACCAAAATCCGAG 59.745 55.0 0.00 0.0 0.00 4.63 F
2894 3028 0.473755 TGGTTCCTGCAAGCTGAAGA 59.526 50.0 0.16 0.0 33.27 2.87 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1707 1801 3.884091 ACAAATACAGGTAAACCGCAACA 59.116 39.130 0.00 0.0 42.08 3.33 R
2787 2908 6.037423 CAGAAGTGCATACCGTAAATTCTC 57.963 41.667 0.00 0.0 0.00 2.87 R
3405 3546 1.915141 ACTGCCCTTCAATGACTTGG 58.085 50.000 0.00 0.0 32.95 3.61 R
4669 7040 0.604243 ACGGCCATTACTGTTTGCGA 60.604 50.000 2.24 0.0 0.00 5.10 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 5.243207 CAGCATCTGCCATCATAAGTATCA 58.757 41.667 0.00 0.00 43.38 2.15
27 28 5.704053 CAGCATCTGCCATCATAAGTATCAA 59.296 40.000 0.00 0.00 43.38 2.57
29 30 6.374613 AGCATCTGCCATCATAAGTATCAATG 59.625 38.462 0.00 0.00 43.38 2.82
30 31 6.373495 GCATCTGCCATCATAAGTATCAATGA 59.627 38.462 0.00 0.00 34.28 2.57
31 32 7.094506 GCATCTGCCATCATAAGTATCAATGAA 60.095 37.037 0.00 0.00 33.83 2.57
33 34 8.557592 TCTGCCATCATAAGTATCAATGAATC 57.442 34.615 0.00 0.00 35.82 2.52
34 35 8.158789 TCTGCCATCATAAGTATCAATGAATCA 58.841 33.333 0.00 0.00 35.82 2.57
35 36 8.873186 TGCCATCATAAGTATCAATGAATCAT 57.127 30.769 0.00 0.00 35.82 2.45
36 37 8.953313 TGCCATCATAAGTATCAATGAATCATC 58.047 33.333 0.00 0.00 35.82 2.92
37 38 8.953313 GCCATCATAAGTATCAATGAATCATCA 58.047 33.333 0.00 0.00 40.57 3.07
39 40 9.989869 CATCATAAGTATCAATGAATCATCAGC 57.010 33.333 0.00 0.00 39.39 4.26
40 41 9.734984 ATCATAAGTATCAATGAATCATCAGCA 57.265 29.630 0.00 0.00 39.39 4.41
41 42 9.563748 TCATAAGTATCAATGAATCATCAGCAA 57.436 29.630 0.00 0.00 39.39 3.91
52 53 9.976511 AATGAATCATCAGCAAATAATAAGTGG 57.023 29.630 0.00 0.00 39.39 4.00
53 54 7.944061 TGAATCATCAGCAAATAATAAGTGGG 58.056 34.615 0.00 0.00 0.00 4.61
54 55 7.779326 TGAATCATCAGCAAATAATAAGTGGGA 59.221 33.333 0.00 0.00 0.00 4.37
55 56 7.756395 ATCATCAGCAAATAATAAGTGGGAG 57.244 36.000 0.00 0.00 0.00 4.30
56 57 6.899089 TCATCAGCAAATAATAAGTGGGAGA 58.101 36.000 0.00 0.00 0.00 3.71
57 58 7.520798 TCATCAGCAAATAATAAGTGGGAGAT 58.479 34.615 0.00 0.00 0.00 2.75
58 59 8.659527 TCATCAGCAAATAATAAGTGGGAGATA 58.340 33.333 0.00 0.00 0.00 1.98
59 60 9.288576 CATCAGCAAATAATAAGTGGGAGATAA 57.711 33.333 0.00 0.00 0.00 1.75
60 61 9.866655 ATCAGCAAATAATAAGTGGGAGATAAA 57.133 29.630 0.00 0.00 0.00 1.40
61 62 9.120538 TCAGCAAATAATAAGTGGGAGATAAAC 57.879 33.333 0.00 0.00 0.00 2.01
62 63 8.902806 CAGCAAATAATAAGTGGGAGATAAACA 58.097 33.333 0.00 0.00 0.00 2.83
63 64 9.125026 AGCAAATAATAAGTGGGAGATAAACAG 57.875 33.333 0.00 0.00 0.00 3.16
64 65 8.352942 GCAAATAATAAGTGGGAGATAAACAGG 58.647 37.037 0.00 0.00 0.00 4.00
65 66 8.850156 CAAATAATAAGTGGGAGATAAACAGGG 58.150 37.037 0.00 0.00 0.00 4.45
66 67 7.947782 ATAATAAGTGGGAGATAAACAGGGA 57.052 36.000 0.00 0.00 0.00 4.20
67 68 6.652205 AATAAGTGGGAGATAAACAGGGAA 57.348 37.500 0.00 0.00 0.00 3.97
68 69 4.576330 AAGTGGGAGATAAACAGGGAAG 57.424 45.455 0.00 0.00 0.00 3.46
69 70 2.239907 AGTGGGAGATAAACAGGGAAGC 59.760 50.000 0.00 0.00 0.00 3.86
70 71 1.564348 TGGGAGATAAACAGGGAAGCC 59.436 52.381 0.00 0.00 0.00 4.35
71 72 1.133761 GGGAGATAAACAGGGAAGCCC 60.134 57.143 0.00 0.00 45.90 5.19
80 81 2.434774 GGGAAGCCCGACAAACCT 59.565 61.111 0.00 0.00 32.13 3.50
81 82 1.681076 GGGAAGCCCGACAAACCTA 59.319 57.895 0.00 0.00 32.13 3.08
82 83 0.392595 GGGAAGCCCGACAAACCTAG 60.393 60.000 0.00 0.00 32.13 3.02
83 84 0.611714 GGAAGCCCGACAAACCTAGA 59.388 55.000 0.00 0.00 0.00 2.43
84 85 1.675116 GGAAGCCCGACAAACCTAGAC 60.675 57.143 0.00 0.00 0.00 2.59
85 86 0.323957 AAGCCCGACAAACCTAGACC 59.676 55.000 0.00 0.00 0.00 3.85
86 87 1.078637 GCCCGACAAACCTAGACCC 60.079 63.158 0.00 0.00 0.00 4.46
87 88 1.600638 CCCGACAAACCTAGACCCC 59.399 63.158 0.00 0.00 0.00 4.95
88 89 0.908180 CCCGACAAACCTAGACCCCT 60.908 60.000 0.00 0.00 0.00 4.79
89 90 0.981943 CCGACAAACCTAGACCCCTT 59.018 55.000 0.00 0.00 0.00 3.95
90 91 1.350019 CCGACAAACCTAGACCCCTTT 59.650 52.381 0.00 0.00 0.00 3.11
91 92 2.614734 CCGACAAACCTAGACCCCTTTC 60.615 54.545 0.00 0.00 0.00 2.62
92 93 2.038033 CGACAAACCTAGACCCCTTTCA 59.962 50.000 0.00 0.00 0.00 2.69
93 94 3.676093 GACAAACCTAGACCCCTTTCAG 58.324 50.000 0.00 0.00 0.00 3.02
94 95 2.375509 ACAAACCTAGACCCCTTTCAGG 59.624 50.000 0.00 0.00 34.30 3.86
95 96 2.375509 CAAACCTAGACCCCTTTCAGGT 59.624 50.000 0.00 0.00 41.38 4.00
96 97 1.657804 ACCTAGACCCCTTTCAGGTG 58.342 55.000 0.00 0.00 38.20 4.00
97 98 0.253327 CCTAGACCCCTTTCAGGTGC 59.747 60.000 0.00 0.00 37.88 5.01
98 99 0.253327 CTAGACCCCTTTCAGGTGCC 59.747 60.000 0.00 0.00 37.88 5.01
99 100 1.205460 TAGACCCCTTTCAGGTGCCC 61.205 60.000 0.00 0.00 37.88 5.36
100 101 2.780924 ACCCCTTTCAGGTGCCCA 60.781 61.111 0.00 0.00 35.85 5.36
101 102 2.155197 GACCCCTTTCAGGTGCCCAT 62.155 60.000 0.00 0.00 37.88 4.00
102 103 1.079073 CCCCTTTCAGGTGCCCATT 59.921 57.895 0.00 0.00 31.93 3.16
103 104 0.972471 CCCCTTTCAGGTGCCCATTC 60.972 60.000 0.00 0.00 31.93 2.67
104 105 0.040204 CCCTTTCAGGTGCCCATTCT 59.960 55.000 0.00 0.00 31.93 2.40
105 106 1.467920 CCTTTCAGGTGCCCATTCTC 58.532 55.000 0.00 0.00 0.00 2.87
106 107 1.467920 CTTTCAGGTGCCCATTCTCC 58.532 55.000 0.00 0.00 0.00 3.71
107 108 1.005215 CTTTCAGGTGCCCATTCTCCT 59.995 52.381 0.00 0.00 0.00 3.69
108 109 0.620556 TTCAGGTGCCCATTCTCCTC 59.379 55.000 0.00 0.00 0.00 3.71
109 110 1.225704 CAGGTGCCCATTCTCCTCC 59.774 63.158 0.00 0.00 0.00 4.30
110 111 1.083706 AGGTGCCCATTCTCCTCCT 59.916 57.895 0.00 0.00 0.00 3.69
111 112 0.985490 AGGTGCCCATTCTCCTCCTC 60.985 60.000 0.00 0.00 0.00 3.71
112 113 1.274703 GGTGCCCATTCTCCTCCTCA 61.275 60.000 0.00 0.00 0.00 3.86
113 114 0.842635 GTGCCCATTCTCCTCCTCAT 59.157 55.000 0.00 0.00 0.00 2.90
114 115 0.841961 TGCCCATTCTCCTCCTCATG 59.158 55.000 0.00 0.00 0.00 3.07
115 116 1.135094 GCCCATTCTCCTCCTCATGA 58.865 55.000 0.00 0.00 0.00 3.07
116 117 1.072015 GCCCATTCTCCTCCTCATGAG 59.928 57.143 16.24 16.24 41.07 2.90
117 118 1.072015 CCCATTCTCCTCCTCATGAGC 59.928 57.143 17.76 0.00 39.98 4.26
118 119 1.767088 CCATTCTCCTCCTCATGAGCA 59.233 52.381 17.76 0.58 39.98 4.26
119 120 2.172082 CCATTCTCCTCCTCATGAGCAA 59.828 50.000 17.76 6.53 39.98 3.91
120 121 3.181442 CCATTCTCCTCCTCATGAGCAAT 60.181 47.826 17.76 5.10 39.98 3.56
121 122 4.462133 CATTCTCCTCCTCATGAGCAATT 58.538 43.478 17.76 0.00 39.98 2.32
122 123 5.455755 CCATTCTCCTCCTCATGAGCAATTA 60.456 44.000 17.76 0.43 39.98 1.40
123 124 5.698741 TTCTCCTCCTCATGAGCAATTAA 57.301 39.130 17.76 4.14 39.98 1.40
124 125 5.698741 TCTCCTCCTCATGAGCAATTAAA 57.301 39.130 17.76 0.00 39.98 1.52
125 126 5.678583 TCTCCTCCTCATGAGCAATTAAAG 58.321 41.667 17.76 7.57 39.98 1.85
126 127 4.202441 TCCTCCTCATGAGCAATTAAAGC 58.798 43.478 17.76 0.00 39.98 3.51
127 128 4.080129 TCCTCCTCATGAGCAATTAAAGCT 60.080 41.667 17.76 5.56 46.82 3.74
128 129 4.036498 CCTCCTCATGAGCAATTAAAGCTG 59.964 45.833 17.76 0.00 43.58 4.24
129 130 4.847198 TCCTCATGAGCAATTAAAGCTGA 58.153 39.130 17.76 3.01 43.58 4.26
130 131 4.637534 TCCTCATGAGCAATTAAAGCTGAC 59.362 41.667 17.76 0.00 43.58 3.51
131 132 4.639310 CCTCATGAGCAATTAAAGCTGACT 59.361 41.667 17.76 0.00 43.58 3.41
132 133 5.125097 CCTCATGAGCAATTAAAGCTGACTT 59.875 40.000 17.76 0.00 43.58 3.01
133 134 6.187125 TCATGAGCAATTAAAGCTGACTTC 57.813 37.500 10.14 0.00 43.58 3.01
134 135 5.706833 TCATGAGCAATTAAAGCTGACTTCA 59.293 36.000 10.14 3.33 43.58 3.02
135 136 6.376299 TCATGAGCAATTAAAGCTGACTTCAT 59.624 34.615 10.14 5.22 43.58 2.57
136 137 7.553760 TCATGAGCAATTAAAGCTGACTTCATA 59.446 33.333 10.14 0.00 43.58 2.15
137 138 7.686438 TGAGCAATTAAAGCTGACTTCATAA 57.314 32.000 10.14 0.00 43.58 1.90
138 139 8.284945 TGAGCAATTAAAGCTGACTTCATAAT 57.715 30.769 10.14 0.00 43.58 1.28
139 140 9.394767 TGAGCAATTAAAGCTGACTTCATAATA 57.605 29.630 10.14 0.00 43.58 0.98
166 167 8.995027 AGAAACATTCATAGGCCATAATAACA 57.005 30.769 5.01 0.00 0.00 2.41
167 168 9.592196 AGAAACATTCATAGGCCATAATAACAT 57.408 29.630 5.01 0.00 0.00 2.71
169 170 9.985730 AAACATTCATAGGCCATAATAACATTG 57.014 29.630 5.01 0.00 0.00 2.82
170 171 7.605449 ACATTCATAGGCCATAATAACATTGC 58.395 34.615 5.01 0.00 0.00 3.56
171 172 6.588719 TTCATAGGCCATAATAACATTGCC 57.411 37.500 5.01 0.00 37.06 4.52
172 173 5.639139 TCATAGGCCATAATAACATTGCCA 58.361 37.500 5.01 0.00 38.81 4.92
173 174 5.711506 TCATAGGCCATAATAACATTGCCAG 59.288 40.000 5.01 0.00 38.81 4.85
174 175 3.914771 AGGCCATAATAACATTGCCAGT 58.085 40.909 5.01 0.00 38.81 4.00
175 176 3.638160 AGGCCATAATAACATTGCCAGTG 59.362 43.478 5.01 0.00 38.81 3.66
176 177 3.636300 GGCCATAATAACATTGCCAGTGA 59.364 43.478 0.00 0.00 36.85 3.41
177 178 4.099266 GGCCATAATAACATTGCCAGTGAA 59.901 41.667 0.00 0.00 36.85 3.18
178 179 5.284079 GCCATAATAACATTGCCAGTGAAG 58.716 41.667 0.00 0.00 0.00 3.02
179 180 5.067674 GCCATAATAACATTGCCAGTGAAGA 59.932 40.000 0.00 0.00 0.00 2.87
180 181 6.239120 GCCATAATAACATTGCCAGTGAAGAT 60.239 38.462 0.00 0.00 0.00 2.40
181 182 7.365741 CCATAATAACATTGCCAGTGAAGATC 58.634 38.462 0.00 0.00 0.00 2.75
182 183 5.841957 AATAACATTGCCAGTGAAGATCC 57.158 39.130 0.00 0.00 0.00 3.36
183 184 1.742761 ACATTGCCAGTGAAGATCCG 58.257 50.000 0.00 0.00 0.00 4.18
184 185 1.278985 ACATTGCCAGTGAAGATCCGA 59.721 47.619 0.00 0.00 0.00 4.55
185 186 1.667724 CATTGCCAGTGAAGATCCGAC 59.332 52.381 0.00 0.00 0.00 4.79
186 187 0.976641 TTGCCAGTGAAGATCCGACT 59.023 50.000 0.00 0.00 0.00 4.18
187 188 1.847328 TGCCAGTGAAGATCCGACTA 58.153 50.000 0.00 0.00 0.00 2.59
188 189 1.751351 TGCCAGTGAAGATCCGACTAG 59.249 52.381 0.00 0.00 0.00 2.57
189 190 1.067821 GCCAGTGAAGATCCGACTAGG 59.932 57.143 0.00 0.00 42.97 3.02
201 202 3.252974 CCGACTAGGAATGAAAGCACT 57.747 47.619 0.00 0.00 45.00 4.40
202 203 3.600388 CCGACTAGGAATGAAAGCACTT 58.400 45.455 0.00 0.00 45.00 3.16
203 204 4.003648 CCGACTAGGAATGAAAGCACTTT 58.996 43.478 0.00 0.00 45.00 2.66
204 205 4.142816 CCGACTAGGAATGAAAGCACTTTG 60.143 45.833 0.00 0.00 45.00 2.77
205 206 4.670221 CGACTAGGAATGAAAGCACTTTGC 60.670 45.833 0.00 0.00 45.46 3.68
218 219 4.461992 GCACTTTGCGTTTCACTAGTAA 57.538 40.909 0.00 0.00 31.71 2.24
219 220 5.030874 GCACTTTGCGTTTCACTAGTAAT 57.969 39.130 0.00 0.00 31.71 1.89
220 221 4.846137 GCACTTTGCGTTTCACTAGTAATG 59.154 41.667 0.00 0.00 31.71 1.90
221 222 5.560183 GCACTTTGCGTTTCACTAGTAATGT 60.560 40.000 0.00 0.00 31.71 2.71
222 223 6.071463 CACTTTGCGTTTCACTAGTAATGTC 58.929 40.000 0.00 0.00 0.00 3.06
223 224 5.756347 ACTTTGCGTTTCACTAGTAATGTCA 59.244 36.000 0.00 0.00 0.00 3.58
224 225 5.839262 TTGCGTTTCACTAGTAATGTCAG 57.161 39.130 0.00 0.00 0.00 3.51
225 226 4.242475 TGCGTTTCACTAGTAATGTCAGG 58.758 43.478 0.00 0.00 0.00 3.86
226 227 4.021807 TGCGTTTCACTAGTAATGTCAGGA 60.022 41.667 0.00 0.00 0.00 3.86
227 228 4.927425 GCGTTTCACTAGTAATGTCAGGAA 59.073 41.667 0.00 0.00 0.00 3.36
228 229 5.062308 GCGTTTCACTAGTAATGTCAGGAAG 59.938 44.000 0.00 0.00 0.00 3.46
229 230 5.577164 CGTTTCACTAGTAATGTCAGGAAGG 59.423 44.000 0.00 0.00 0.00 3.46
230 231 6.571731 CGTTTCACTAGTAATGTCAGGAAGGA 60.572 42.308 0.00 0.00 0.00 3.36
231 232 6.928348 TTCACTAGTAATGTCAGGAAGGAA 57.072 37.500 0.00 0.00 0.00 3.36
232 233 6.928348 TCACTAGTAATGTCAGGAAGGAAA 57.072 37.500 0.00 0.00 0.00 3.13
233 234 7.311092 TCACTAGTAATGTCAGGAAGGAAAA 57.689 36.000 0.00 0.00 0.00 2.29
234 235 7.159372 TCACTAGTAATGTCAGGAAGGAAAAC 58.841 38.462 0.00 0.00 0.00 2.43
235 236 7.016268 TCACTAGTAATGTCAGGAAGGAAAACT 59.984 37.037 0.00 0.00 0.00 2.66
236 237 7.661847 CACTAGTAATGTCAGGAAGGAAAACTT 59.338 37.037 0.00 0.00 43.65 2.66
237 238 8.218488 ACTAGTAATGTCAGGAAGGAAAACTTT 58.782 33.333 0.00 0.00 40.21 2.66
238 239 9.720769 CTAGTAATGTCAGGAAGGAAAACTTTA 57.279 33.333 0.00 0.00 40.21 1.85
239 240 8.990163 AGTAATGTCAGGAAGGAAAACTTTAA 57.010 30.769 0.00 0.00 40.21 1.52
240 241 9.067986 AGTAATGTCAGGAAGGAAAACTTTAAG 57.932 33.333 0.00 0.00 40.21 1.85
241 242 5.767816 TGTCAGGAAGGAAAACTTTAAGC 57.232 39.130 0.00 0.00 40.21 3.09
242 243 4.583073 TGTCAGGAAGGAAAACTTTAAGCC 59.417 41.667 0.00 0.00 40.21 4.35
243 244 4.827835 GTCAGGAAGGAAAACTTTAAGCCT 59.172 41.667 0.00 0.00 40.21 4.58
244 245 6.002082 GTCAGGAAGGAAAACTTTAAGCCTA 58.998 40.000 0.00 0.00 40.21 3.93
245 246 6.149640 GTCAGGAAGGAAAACTTTAAGCCTAG 59.850 42.308 0.00 0.00 40.21 3.02
246 247 5.010933 AGGAAGGAAAACTTTAAGCCTAGC 58.989 41.667 0.00 0.00 40.21 3.42
247 248 5.010933 GGAAGGAAAACTTTAAGCCTAGCT 58.989 41.667 0.00 0.00 40.21 3.32
248 249 5.106118 GGAAGGAAAACTTTAAGCCTAGCTG 60.106 44.000 0.00 0.00 40.21 4.24
249 250 3.759086 AGGAAAACTTTAAGCCTAGCTGC 59.241 43.478 0.00 0.00 39.62 5.25
250 251 3.119459 GGAAAACTTTAAGCCTAGCTGCC 60.119 47.826 0.00 0.00 39.62 4.85
251 252 2.879103 AACTTTAAGCCTAGCTGCCA 57.121 45.000 0.00 0.00 39.62 4.92
252 253 2.879103 ACTTTAAGCCTAGCTGCCAA 57.121 45.000 0.00 0.00 39.62 4.52
253 254 2.437413 ACTTTAAGCCTAGCTGCCAAC 58.563 47.619 0.00 0.00 39.62 3.77
254 255 2.224769 ACTTTAAGCCTAGCTGCCAACA 60.225 45.455 0.00 0.00 39.62 3.33
255 256 2.806945 TTAAGCCTAGCTGCCAACAT 57.193 45.000 0.00 0.00 39.62 2.71
256 257 2.806945 TAAGCCTAGCTGCCAACATT 57.193 45.000 0.00 0.00 39.62 2.71
257 258 1.928868 AAGCCTAGCTGCCAACATTT 58.071 45.000 0.00 0.00 39.62 2.32
258 259 1.928868 AGCCTAGCTGCCAACATTTT 58.071 45.000 0.00 0.00 37.57 1.82
259 260 2.250924 AGCCTAGCTGCCAACATTTTT 58.749 42.857 0.00 0.00 37.57 1.94
260 261 2.028748 AGCCTAGCTGCCAACATTTTTG 60.029 45.455 0.00 0.00 37.57 2.44
261 262 2.340337 CCTAGCTGCCAACATTTTTGC 58.660 47.619 0.00 0.00 0.00 3.68
262 263 2.288948 CCTAGCTGCCAACATTTTTGCA 60.289 45.455 0.00 0.00 32.66 4.08
263 264 2.328819 AGCTGCCAACATTTTTGCAA 57.671 40.000 0.00 0.00 33.22 4.08
264 265 2.853705 AGCTGCCAACATTTTTGCAAT 58.146 38.095 0.00 0.00 33.22 3.56
265 266 2.550606 AGCTGCCAACATTTTTGCAATG 59.449 40.909 0.00 0.00 33.22 2.82
266 267 2.548904 GCTGCCAACATTTTTGCAATGA 59.451 40.909 0.00 0.00 33.22 2.57
267 268 3.607542 GCTGCCAACATTTTTGCAATGAC 60.608 43.478 0.00 0.00 33.22 3.06
268 269 3.806380 TGCCAACATTTTTGCAATGACT 58.194 36.364 0.00 0.00 30.67 3.41
269 270 4.197750 TGCCAACATTTTTGCAATGACTT 58.802 34.783 0.00 0.00 30.67 3.01
270 271 4.639310 TGCCAACATTTTTGCAATGACTTT 59.361 33.333 0.00 0.00 30.67 2.66
271 272 5.819379 TGCCAACATTTTTGCAATGACTTTA 59.181 32.000 0.00 0.00 30.67 1.85
272 273 6.485984 TGCCAACATTTTTGCAATGACTTTAT 59.514 30.769 0.00 0.00 30.67 1.40
273 274 7.658982 TGCCAACATTTTTGCAATGACTTTATA 59.341 29.630 0.00 0.00 30.67 0.98
274 275 8.170553 GCCAACATTTTTGCAATGACTTTATAG 58.829 33.333 0.00 0.00 0.00 1.31
275 276 9.421806 CCAACATTTTTGCAATGACTTTATAGA 57.578 29.630 0.00 0.00 0.00 1.98
277 278 8.986477 ACATTTTTGCAATGACTTTATAGACC 57.014 30.769 0.00 0.00 0.00 3.85
278 279 8.584157 ACATTTTTGCAATGACTTTATAGACCA 58.416 29.630 0.00 0.00 0.00 4.02
279 280 8.863049 CATTTTTGCAATGACTTTATAGACCAC 58.137 33.333 0.00 0.00 0.00 4.16
280 281 7.759489 TTTTGCAATGACTTTATAGACCACT 57.241 32.000 0.00 0.00 0.00 4.00
281 282 6.741992 TTGCAATGACTTTATAGACCACTG 57.258 37.500 0.00 0.00 0.00 3.66
282 283 4.635765 TGCAATGACTTTATAGACCACTGC 59.364 41.667 0.00 0.00 34.23 4.40
283 284 4.635765 GCAATGACTTTATAGACCACTGCA 59.364 41.667 0.00 0.00 34.01 4.41
284 285 5.297776 GCAATGACTTTATAGACCACTGCAT 59.702 40.000 0.00 0.00 34.01 3.96
285 286 6.183360 GCAATGACTTTATAGACCACTGCATT 60.183 38.462 0.00 0.00 34.01 3.56
286 287 7.629222 GCAATGACTTTATAGACCACTGCATTT 60.629 37.037 0.00 0.00 34.01 2.32
287 288 7.944729 ATGACTTTATAGACCACTGCATTTT 57.055 32.000 0.00 0.00 0.00 1.82
288 289 7.759489 TGACTTTATAGACCACTGCATTTTT 57.241 32.000 0.00 0.00 0.00 1.94
305 306 2.346099 TTTTTATCACGCTGCCAAGC 57.654 45.000 0.00 0.00 46.66 4.01
314 315 3.494850 GCTGCCAAGCCACCTATAA 57.505 52.632 0.00 0.00 44.22 0.98
315 316 1.312815 GCTGCCAAGCCACCTATAAG 58.687 55.000 0.00 0.00 44.22 1.73
316 317 1.972872 CTGCCAAGCCACCTATAAGG 58.027 55.000 0.00 0.00 42.49 2.69
317 318 4.662349 GCTGCCAAGCCACCTATAAGGT 62.662 54.545 0.00 0.00 44.80 3.50
318 319 5.328312 GCTGCCAAGCCACCTATAAGGTA 62.328 52.174 0.00 0.00 45.04 3.08
334 335 9.132923 CCTATAAGGTACACTCTATGAACTTGA 57.867 37.037 0.00 0.00 0.00 3.02
336 337 8.824756 ATAAGGTACACTCTATGAACTTGAGA 57.175 34.615 0.00 0.00 31.94 3.27
337 338 7.726033 AAGGTACACTCTATGAACTTGAGAT 57.274 36.000 0.00 0.00 31.94 2.75
338 339 7.726033 AGGTACACTCTATGAACTTGAGATT 57.274 36.000 0.00 0.00 31.94 2.40
339 340 8.824756 AGGTACACTCTATGAACTTGAGATTA 57.175 34.615 0.00 0.00 31.94 1.75
340 341 8.688151 AGGTACACTCTATGAACTTGAGATTAC 58.312 37.037 0.00 0.00 31.94 1.89
341 342 8.467598 GGTACACTCTATGAACTTGAGATTACA 58.532 37.037 0.00 0.00 31.94 2.41
342 343 9.291664 GTACACTCTATGAACTTGAGATTACAC 57.708 37.037 0.00 0.00 31.94 2.90
343 344 8.128322 ACACTCTATGAACTTGAGATTACACT 57.872 34.615 0.00 0.00 31.94 3.55
344 345 8.031864 ACACTCTATGAACTTGAGATTACACTG 58.968 37.037 0.00 0.00 31.94 3.66
345 346 7.009999 CACTCTATGAACTTGAGATTACACTGC 59.990 40.741 0.00 0.00 31.94 4.40
346 347 6.341316 TCTATGAACTTGAGATTACACTGCC 58.659 40.000 0.00 0.00 0.00 4.85
347 348 3.674997 TGAACTTGAGATTACACTGCCC 58.325 45.455 0.00 0.00 0.00 5.36
348 349 2.789409 ACTTGAGATTACACTGCCCC 57.211 50.000 0.00 0.00 0.00 5.80
349 350 1.985159 ACTTGAGATTACACTGCCCCA 59.015 47.619 0.00 0.00 0.00 4.96
350 351 2.290323 ACTTGAGATTACACTGCCCCAC 60.290 50.000 0.00 0.00 0.00 4.61
351 352 0.618458 TGAGATTACACTGCCCCACC 59.382 55.000 0.00 0.00 0.00 4.61
352 353 0.618458 GAGATTACACTGCCCCACCA 59.382 55.000 0.00 0.00 0.00 4.17
353 354 1.212935 GAGATTACACTGCCCCACCAT 59.787 52.381 0.00 0.00 0.00 3.55
354 355 1.064463 AGATTACACTGCCCCACCATG 60.064 52.381 0.00 0.00 0.00 3.66
355 356 0.704076 ATTACACTGCCCCACCATGT 59.296 50.000 0.00 0.00 0.00 3.21
356 357 0.251121 TTACACTGCCCCACCATGTG 60.251 55.000 0.00 0.00 35.09 3.21
368 369 1.506262 CCATGTGGTTAGCGGTTGC 59.494 57.895 0.00 0.00 43.24 4.17
378 379 4.533566 GCGGTTGCTTTTTCTCGG 57.466 55.556 0.00 0.00 38.39 4.63
379 380 1.081442 GCGGTTGCTTTTTCTCGGG 60.081 57.895 0.00 0.00 38.39 5.14
380 381 1.512156 GCGGTTGCTTTTTCTCGGGA 61.512 55.000 0.00 0.00 38.39 5.14
381 382 0.948678 CGGTTGCTTTTTCTCGGGAA 59.051 50.000 0.00 0.00 0.00 3.97
382 383 1.335496 CGGTTGCTTTTTCTCGGGAAA 59.665 47.619 6.31 6.31 39.38 3.13
383 384 2.223618 CGGTTGCTTTTTCTCGGGAAAA 60.224 45.455 19.14 19.14 45.97 2.29
434 435 9.638239 AATGTTAATCAAGCATTCGTAAAATGT 57.362 25.926 0.30 0.00 0.00 2.71
435 436 9.638239 ATGTTAATCAAGCATTCGTAAAATGTT 57.362 25.926 0.30 0.00 0.00 2.71
436 437 8.910666 TGTTAATCAAGCATTCGTAAAATGTTG 58.089 29.630 0.30 4.14 0.00 3.33
437 438 9.123709 GTTAATCAAGCATTCGTAAAATGTTGA 57.876 29.630 13.17 13.17 34.96 3.18
438 439 9.684448 TTAATCAAGCATTCGTAAAATGTTGAA 57.316 25.926 14.05 0.00 34.59 2.69
439 440 8.761575 AATCAAGCATTCGTAAAATGTTGAAT 57.238 26.923 14.05 7.90 34.59 2.57
440 441 8.761575 ATCAAGCATTCGTAAAATGTTGAATT 57.238 26.923 14.05 0.00 34.59 2.17
441 442 8.586570 TCAAGCATTCGTAAAATGTTGAATTT 57.413 26.923 10.51 0.00 31.44 1.82
442 443 8.486383 TCAAGCATTCGTAAAATGTTGAATTTG 58.514 29.630 10.51 0.00 31.44 2.32
443 444 7.945033 AGCATTCGTAAAATGTTGAATTTGT 57.055 28.000 0.30 0.00 0.00 2.83
444 445 9.469807 AAGCATTCGTAAAATGTTGAATTTGTA 57.530 25.926 0.30 0.00 0.00 2.41
445 446 9.638239 AGCATTCGTAAAATGTTGAATTTGTAT 57.362 25.926 0.30 0.00 0.00 2.29
565 566 8.460831 ACGTTGACCATTTATTTAAAAGATGC 57.539 30.769 0.00 0.00 0.00 3.91
566 567 8.303876 ACGTTGACCATTTATTTAAAAGATGCT 58.696 29.630 0.00 0.00 0.00 3.79
567 568 9.139174 CGTTGACCATTTATTTAAAAGATGCTT 57.861 29.630 0.00 0.00 0.00 3.91
608 609 4.924019 CAAGTATTGGACCGGCGA 57.076 55.556 9.30 0.00 43.94 5.54
609 610 2.677971 CAAGTATTGGACCGGCGAG 58.322 57.895 9.30 0.06 43.94 5.03
610 611 0.174845 CAAGTATTGGACCGGCGAGA 59.825 55.000 9.30 0.00 43.94 4.04
611 612 0.175073 AAGTATTGGACCGGCGAGAC 59.825 55.000 9.30 0.00 0.00 3.36
612 613 0.968901 AGTATTGGACCGGCGAGACA 60.969 55.000 9.30 0.00 0.00 3.41
613 614 0.104304 GTATTGGACCGGCGAGACAT 59.896 55.000 9.30 0.00 0.00 3.06
614 615 1.338973 GTATTGGACCGGCGAGACATA 59.661 52.381 9.30 0.00 0.00 2.29
615 616 0.389391 ATTGGACCGGCGAGACATAG 59.611 55.000 9.30 0.00 0.00 2.23
616 617 0.681887 TTGGACCGGCGAGACATAGA 60.682 55.000 9.30 0.00 0.00 1.98
617 618 0.681887 TGGACCGGCGAGACATAGAA 60.682 55.000 9.30 0.00 0.00 2.10
618 619 0.248949 GGACCGGCGAGACATAGAAC 60.249 60.000 9.30 0.00 0.00 3.01
619 620 0.591741 GACCGGCGAGACATAGAACG 60.592 60.000 9.30 0.00 0.00 3.95
620 621 1.028330 ACCGGCGAGACATAGAACGA 61.028 55.000 9.30 0.00 0.00 3.85
621 622 0.317103 CCGGCGAGACATAGAACGAG 60.317 60.000 9.30 0.00 0.00 4.18
622 623 0.377554 CGGCGAGACATAGAACGAGT 59.622 55.000 0.00 0.00 0.00 4.18
623 624 1.596260 CGGCGAGACATAGAACGAGTA 59.404 52.381 0.00 0.00 0.00 2.59
624 625 2.223611 CGGCGAGACATAGAACGAGTAT 59.776 50.000 0.00 0.00 0.00 2.12
625 626 3.303857 CGGCGAGACATAGAACGAGTATT 60.304 47.826 0.00 0.00 0.00 1.89
626 627 3.975670 GGCGAGACATAGAACGAGTATTG 59.024 47.826 0.00 0.00 0.00 1.90
627 628 3.975670 GCGAGACATAGAACGAGTATTGG 59.024 47.826 0.00 0.00 0.00 3.16
628 629 4.261072 GCGAGACATAGAACGAGTATTGGA 60.261 45.833 0.00 0.00 0.00 3.53
629 630 5.206299 CGAGACATAGAACGAGTATTGGAC 58.794 45.833 0.00 0.00 0.00 4.02
630 631 5.517322 AGACATAGAACGAGTATTGGACC 57.483 43.478 0.00 0.00 0.00 4.46
631 632 4.036498 AGACATAGAACGAGTATTGGACCG 59.964 45.833 0.00 0.00 0.00 4.79
632 633 3.067742 ACATAGAACGAGTATTGGACCGG 59.932 47.826 0.00 0.00 0.00 5.28
633 634 0.175073 AGAACGAGTATTGGACCGGC 59.825 55.000 0.00 0.00 0.00 6.13
634 635 1.143969 GAACGAGTATTGGACCGGCG 61.144 60.000 0.00 0.00 0.00 6.46
635 636 2.960129 CGAGTATTGGACCGGCGC 60.960 66.667 0.00 0.00 0.00 6.53
636 637 2.960129 GAGTATTGGACCGGCGCG 60.960 66.667 0.00 0.00 0.00 6.86
648 649 4.090057 GGCGCGCTGGACAAGAAC 62.090 66.667 32.29 5.91 0.00 3.01
649 650 4.430423 GCGCGCTGGACAAGAACG 62.430 66.667 26.67 0.00 0.00 3.95
650 651 2.733218 CGCGCTGGACAAGAACGA 60.733 61.111 5.56 0.00 0.00 3.85
651 652 2.094659 CGCGCTGGACAAGAACGAT 61.095 57.895 5.56 0.00 0.00 3.73
652 653 1.626654 CGCGCTGGACAAGAACGATT 61.627 55.000 5.56 0.00 0.00 3.34
653 654 0.095417 GCGCTGGACAAGAACGATTC 59.905 55.000 0.00 0.00 0.00 2.52
654 655 1.428448 CGCTGGACAAGAACGATTCA 58.572 50.000 0.00 0.00 0.00 2.57
655 656 2.002586 CGCTGGACAAGAACGATTCAT 58.997 47.619 0.00 0.00 0.00 2.57
656 657 2.029728 CGCTGGACAAGAACGATTCATC 59.970 50.000 0.00 0.00 0.00 2.92
671 672 4.861210 GATTCATCGAGACGGATGTTAGT 58.139 43.478 8.70 0.00 43.39 2.24
672 673 3.965292 TCATCGAGACGGATGTTAGTC 57.035 47.619 8.70 0.00 43.39 2.59
677 678 1.752683 AGACGGATGTTAGTCTCGCT 58.247 50.000 0.00 0.00 43.52 4.93
678 679 2.915349 AGACGGATGTTAGTCTCGCTA 58.085 47.619 0.00 0.00 43.52 4.26
679 680 3.478509 AGACGGATGTTAGTCTCGCTAT 58.521 45.455 0.00 0.00 43.52 2.97
680 681 4.639334 AGACGGATGTTAGTCTCGCTATA 58.361 43.478 0.00 0.00 43.52 1.31
681 682 5.061853 AGACGGATGTTAGTCTCGCTATAA 58.938 41.667 0.00 0.00 43.52 0.98
682 683 5.179742 AGACGGATGTTAGTCTCGCTATAAG 59.820 44.000 0.00 0.00 43.52 1.73
683 684 4.159857 CGGATGTTAGTCTCGCTATAAGC 58.840 47.826 0.00 0.00 38.02 3.09
697 698 5.694674 GCTATAAGCGAGACATAGCATTC 57.305 43.478 7.71 0.00 44.23 2.67
698 699 4.264145 GCTATAAGCGAGACATAGCATTCG 59.736 45.833 7.71 0.00 44.23 3.34
701 702 2.136649 CGAGACATAGCATTCGCGG 58.863 57.895 6.13 0.00 45.49 6.46
702 703 0.595053 CGAGACATAGCATTCGCGGT 60.595 55.000 6.13 0.00 45.49 5.68
703 704 1.571919 GAGACATAGCATTCGCGGTT 58.428 50.000 6.13 0.00 45.49 4.44
704 705 2.739292 GAGACATAGCATTCGCGGTTA 58.261 47.619 6.13 0.00 45.49 2.85
705 706 3.120792 GAGACATAGCATTCGCGGTTAA 58.879 45.455 6.13 0.00 45.49 2.01
706 707 3.527533 AGACATAGCATTCGCGGTTAAA 58.472 40.909 6.13 0.00 45.49 1.52
707 708 3.936453 AGACATAGCATTCGCGGTTAAAA 59.064 39.130 6.13 0.00 45.49 1.52
708 709 4.393680 AGACATAGCATTCGCGGTTAAAAA 59.606 37.500 6.13 0.00 45.49 1.94
709 710 4.408694 ACATAGCATTCGCGGTTAAAAAC 58.591 39.130 6.13 0.00 45.49 2.43
782 783 9.575783 TTTTGAGACAACAAATAAAACCAGTAC 57.424 29.630 0.00 0.00 39.09 2.73
783 784 8.514330 TTGAGACAACAAATAAAACCAGTACT 57.486 30.769 0.00 0.00 0.00 2.73
784 785 7.925993 TGAGACAACAAATAAAACCAGTACTG 58.074 34.615 16.34 16.34 0.00 2.74
785 786 6.735130 AGACAACAAATAAAACCAGTACTGC 58.265 36.000 17.86 0.00 0.00 4.40
786 787 6.320164 AGACAACAAATAAAACCAGTACTGCA 59.680 34.615 17.86 0.00 0.00 4.41
787 788 6.868622 ACAACAAATAAAACCAGTACTGCAA 58.131 32.000 17.86 0.65 0.00 4.08
788 789 7.496747 ACAACAAATAAAACCAGTACTGCAAT 58.503 30.769 17.86 5.73 0.00 3.56
789 790 7.984617 ACAACAAATAAAACCAGTACTGCAATT 59.015 29.630 17.86 12.73 0.00 2.32
790 791 8.825745 CAACAAATAAAACCAGTACTGCAATTT 58.174 29.630 17.86 17.51 0.00 1.82
791 792 8.956533 ACAAATAAAACCAGTACTGCAATTTT 57.043 26.923 23.08 23.08 0.00 1.82
792 793 9.389755 ACAAATAAAACCAGTACTGCAATTTTT 57.610 25.926 23.99 21.22 0.00 1.94
817 818 8.958175 TTTTTAGGCAAACGAGTAAATACATG 57.042 30.769 0.00 0.00 0.00 3.21
818 819 4.616181 AGGCAAACGAGTAAATACATGC 57.384 40.909 0.00 0.00 0.00 4.06
819 820 3.691498 GGCAAACGAGTAAATACATGCC 58.309 45.455 0.00 0.00 44.44 4.40
820 821 3.377172 GGCAAACGAGTAAATACATGCCT 59.623 43.478 6.22 0.00 46.52 4.75
821 822 4.495844 GGCAAACGAGTAAATACATGCCTC 60.496 45.833 6.22 0.00 46.52 4.70
822 823 4.495844 GCAAACGAGTAAATACATGCCTCC 60.496 45.833 0.00 0.00 0.00 4.30
823 824 4.755266 AACGAGTAAATACATGCCTCCT 57.245 40.909 0.00 0.00 0.00 3.69
824 825 4.323553 ACGAGTAAATACATGCCTCCTC 57.676 45.455 0.00 0.00 0.00 3.71
825 826 3.243434 ACGAGTAAATACATGCCTCCTCG 60.243 47.826 14.55 14.55 44.35 4.63
826 827 3.243434 CGAGTAAATACATGCCTCCTCGT 60.243 47.826 10.23 0.00 36.68 4.18
827 828 4.299978 GAGTAAATACATGCCTCCTCGTC 58.700 47.826 0.00 0.00 0.00 4.20
828 829 2.225068 AAATACATGCCTCCTCGTCG 57.775 50.000 0.00 0.00 0.00 5.12
829 830 1.112113 AATACATGCCTCCTCGTCGT 58.888 50.000 0.00 0.00 0.00 4.34
830 831 0.385751 ATACATGCCTCCTCGTCGTG 59.614 55.000 0.00 0.00 0.00 4.35
831 832 0.963856 TACATGCCTCCTCGTCGTGT 60.964 55.000 0.00 0.00 34.67 4.49
832 833 1.517257 CATGCCTCCTCGTCGTGTC 60.517 63.158 0.00 0.00 0.00 3.67
833 834 2.711922 ATGCCTCCTCGTCGTGTCC 61.712 63.158 0.00 0.00 0.00 4.02
834 835 4.477975 GCCTCCTCGTCGTGTCCG 62.478 72.222 0.00 0.00 0.00 4.79
835 836 2.745100 CCTCCTCGTCGTGTCCGA 60.745 66.667 0.00 0.00 41.73 4.55
839 840 3.563842 CTCGTCGTGTCCGAGTCT 58.436 61.111 1.87 0.00 45.26 3.24
840 841 1.867615 CTCGTCGTGTCCGAGTCTT 59.132 57.895 1.87 0.00 45.26 3.01
841 842 0.452950 CTCGTCGTGTCCGAGTCTTG 60.453 60.000 1.87 0.00 45.26 3.02
842 843 1.162181 TCGTCGTGTCCGAGTCTTGT 61.162 55.000 0.00 0.00 45.26 3.16
843 844 0.997226 CGTCGTGTCCGAGTCTTGTG 60.997 60.000 0.00 0.00 45.26 3.33
844 845 0.030369 GTCGTGTCCGAGTCTTGTGT 59.970 55.000 0.00 0.00 45.26 3.72
845 846 0.030235 TCGTGTCCGAGTCTTGTGTG 59.970 55.000 0.00 0.00 38.40 3.82
846 847 0.939577 CGTGTCCGAGTCTTGTGTGG 60.940 60.000 0.00 0.00 35.63 4.17
847 848 0.387929 GTGTCCGAGTCTTGTGTGGA 59.612 55.000 0.00 0.00 0.00 4.02
856 857 2.375174 AGTCTTGTGTGGAAGCCCATTA 59.625 45.455 0.00 0.00 45.68 1.90
858 859 3.057526 GTCTTGTGTGGAAGCCCATTAAC 60.058 47.826 0.00 0.00 45.68 2.01
862 863 2.161609 GTGTGGAAGCCCATTAACGAAG 59.838 50.000 0.00 0.00 45.68 3.79
873 874 0.679640 TTAACGAAGGCCAGCCCATG 60.680 55.000 5.01 0.00 36.58 3.66
893 894 2.186125 GGTTTCGGCCCGGAGTAG 59.814 66.667 0.73 0.00 0.00 2.57
897 898 0.248289 TTTCGGCCCGGAGTAGAAAG 59.752 55.000 0.73 0.00 0.00 2.62
903 904 0.739813 CCCGGAGTAGAAAGCCAACG 60.740 60.000 0.73 0.00 0.00 4.10
914 915 1.077716 AGCCAACGCTACCCCAATC 60.078 57.895 0.00 0.00 46.08 2.67
915 916 1.077716 GCCAACGCTACCCCAATCT 60.078 57.895 0.00 0.00 0.00 2.40
929 930 3.912528 CCCCAATCTGATCTAGGGATTCA 59.087 47.826 18.89 0.00 42.25 2.57
932 933 6.468359 CCCCAATCTGATCTAGGGATTCATTT 60.468 42.308 18.89 0.00 42.25 2.32
934 935 6.658391 CCAATCTGATCTAGGGATTCATTTCC 59.342 42.308 0.00 0.00 34.83 3.13
935 936 7.229308 CAATCTGATCTAGGGATTCATTTCCA 58.771 38.462 0.00 0.00 37.53 3.53
936 937 7.585884 ATCTGATCTAGGGATTCATTTCCAT 57.414 36.000 0.00 0.00 37.53 3.41
937 938 7.398289 TCTGATCTAGGGATTCATTTCCATT 57.602 36.000 0.00 0.00 37.53 3.16
938 939 7.819500 TCTGATCTAGGGATTCATTTCCATTT 58.180 34.615 0.00 0.00 37.53 2.32
939 940 7.722728 TCTGATCTAGGGATTCATTTCCATTTG 59.277 37.037 0.00 0.00 37.53 2.32
940 941 6.266103 TGATCTAGGGATTCATTTCCATTTGC 59.734 38.462 0.00 0.00 37.53 3.68
941 942 4.895297 TCTAGGGATTCATTTCCATTTGCC 59.105 41.667 0.00 0.00 37.53 4.52
942 943 2.773661 AGGGATTCATTTCCATTTGCCC 59.226 45.455 0.00 0.00 37.53 5.36
944 945 2.773661 GGATTCATTTCCATTTGCCCCT 59.226 45.455 0.00 0.00 35.72 4.79
945 946 3.966665 GGATTCATTTCCATTTGCCCCTA 59.033 43.478 0.00 0.00 35.72 3.53
946 947 4.202253 GGATTCATTTCCATTTGCCCCTAC 60.202 45.833 0.00 0.00 35.72 3.18
947 948 2.745968 TCATTTCCATTTGCCCCTACC 58.254 47.619 0.00 0.00 0.00 3.18
948 949 2.043664 TCATTTCCATTTGCCCCTACCA 59.956 45.455 0.00 0.00 0.00 3.25
949 950 2.704190 TTTCCATTTGCCCCTACCAA 57.296 45.000 0.00 0.00 0.00 3.67
952 953 3.197927 TCCATTTGCCCCTACCAAAAT 57.802 42.857 0.00 0.00 35.97 1.82
953 954 3.103742 TCCATTTGCCCCTACCAAAATC 58.896 45.455 0.00 0.00 35.97 2.17
955 956 1.551452 TTTGCCCCTACCAAAATCCG 58.449 50.000 0.00 0.00 29.93 4.18
956 957 0.699399 TTGCCCCTACCAAAATCCGA 59.301 50.000 0.00 0.00 0.00 4.55
957 958 0.254747 TGCCCCTACCAAAATCCGAG 59.745 55.000 0.00 0.00 0.00 4.63
959 960 0.814010 CCCCTACCAAAATCCGAGCG 60.814 60.000 0.00 0.00 0.00 5.03
981 984 3.864686 CGGCGGCGAGGTTTGATG 61.865 66.667 29.19 0.00 0.00 3.07
992 995 2.945668 GAGGTTTGATGGATTCTTCGGG 59.054 50.000 0.00 0.00 0.00 5.14
1013 1028 2.026522 CGGAGATGGAGACGGAGAC 58.973 63.158 0.00 0.00 0.00 3.36
1032 1047 1.040339 CGGAGAGGGAGTCCAGGAAG 61.040 65.000 12.30 0.00 33.14 3.46
1076 1091 2.285743 GGAGGGCCCTTCTCTGGT 60.286 66.667 29.39 0.00 0.00 4.00
1082 1097 4.785453 CCCTTCTCTGGTGGCGGC 62.785 72.222 0.00 0.00 0.00 6.53
1528 1560 3.181465 ACCATTGGCGTCTTAGGTAGATG 60.181 47.826 1.54 0.00 41.93 2.90
2894 3028 0.473755 TGGTTCCTGCAAGCTGAAGA 59.526 50.000 0.16 0.00 33.27 2.87
3405 3546 1.234821 TGGAAGCCACAATTCGTGTC 58.765 50.000 7.09 0.00 44.78 3.67
3503 3644 9.551734 TGTGATGATCTCATTACTGGATTTTAG 57.448 33.333 14.01 0.00 41.65 1.85
3534 3675 0.328926 TGCCAGTTGATGCTGATGGA 59.671 50.000 0.00 0.00 38.70 3.41
3570 3711 4.035017 CACGCCAAGTTGTTTCTGTTAAG 58.965 43.478 1.45 0.00 0.00 1.85
3696 5926 4.881273 AGCACTAATTACATGCCGATGAAA 59.119 37.500 11.63 0.00 40.33 2.69
3752 5982 2.488347 GGTCCCTTTTCAGCTGTTGGTA 60.488 50.000 14.67 0.00 0.00 3.25
3779 6042 8.456124 AGGAATAAGACCAAGAGAGAGATAGAT 58.544 37.037 0.00 0.00 0.00 1.98
3863 6130 4.218417 CCCCTTGTCCTATTGTTTGAAGTG 59.782 45.833 0.00 0.00 0.00 3.16
3874 6141 7.537306 CCTATTGTTTGAAGTGGTATTTTGACG 59.463 37.037 0.00 0.00 0.00 4.35
4133 6480 8.721478 TCTCAAATAAAGATAAGAACACAGCAC 58.279 33.333 0.00 0.00 0.00 4.40
4283 6653 5.931146 AGTGATGTGAGTTTCAGAGAATGTC 59.069 40.000 0.00 0.00 0.00 3.06
4510 6881 4.142600 GCTCAAACTCGGAGTTAAATGCAT 60.143 41.667 22.67 3.61 37.47 3.96
4648 7019 0.749649 TTTTGACATGGCAAAGCGGT 59.250 45.000 25.09 0.00 38.80 5.68
4669 7040 2.203153 GTGGCTTGTGGTGGACGT 60.203 61.111 0.00 0.00 0.00 4.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 5.243207 TGATACTTATGATGGCAGATGCTG 58.757 41.667 4.59 0.00 41.70 4.41
4 5 5.494390 TGATACTTATGATGGCAGATGCT 57.506 39.130 4.59 0.00 41.70 3.79
6 7 7.916914 TCATTGATACTTATGATGGCAGATG 57.083 36.000 0.00 0.00 0.00 2.90
7 8 9.175312 GATTCATTGATACTTATGATGGCAGAT 57.825 33.333 0.00 0.00 31.34 2.90
8 9 8.158789 TGATTCATTGATACTTATGATGGCAGA 58.841 33.333 0.00 0.00 31.34 4.26
9 10 8.331730 TGATTCATTGATACTTATGATGGCAG 57.668 34.615 0.00 0.00 31.34 4.85
10 11 8.873186 ATGATTCATTGATACTTATGATGGCA 57.127 30.769 0.00 0.00 31.34 4.92
11 12 8.953313 TGATGATTCATTGATACTTATGATGGC 58.047 33.333 0.00 0.00 31.34 4.40
13 14 9.989869 GCTGATGATTCATTGATACTTATGATG 57.010 33.333 0.00 0.00 31.34 3.07
14 15 9.734984 TGCTGATGATTCATTGATACTTATGAT 57.265 29.630 0.00 0.00 31.34 2.45
15 16 9.563748 TTGCTGATGATTCATTGATACTTATGA 57.436 29.630 0.00 0.00 0.00 2.15
26 27 9.976511 CCACTTATTATTTGCTGATGATTCATT 57.023 29.630 0.00 0.00 0.00 2.57
27 28 8.582437 CCCACTTATTATTTGCTGATGATTCAT 58.418 33.333 0.00 0.00 0.00 2.57
29 30 8.169977 TCCCACTTATTATTTGCTGATGATTC 57.830 34.615 0.00 0.00 0.00 2.52
30 31 8.000709 TCTCCCACTTATTATTTGCTGATGATT 58.999 33.333 0.00 0.00 0.00 2.57
31 32 7.520798 TCTCCCACTTATTATTTGCTGATGAT 58.479 34.615 0.00 0.00 0.00 2.45
33 34 7.756395 ATCTCCCACTTATTATTTGCTGATG 57.244 36.000 0.00 0.00 0.00 3.07
34 35 9.866655 TTTATCTCCCACTTATTATTTGCTGAT 57.133 29.630 0.00 0.00 0.00 2.90
35 36 9.120538 GTTTATCTCCCACTTATTATTTGCTGA 57.879 33.333 0.00 0.00 0.00 4.26
36 37 8.902806 TGTTTATCTCCCACTTATTATTTGCTG 58.097 33.333 0.00 0.00 0.00 4.41
37 38 9.125026 CTGTTTATCTCCCACTTATTATTTGCT 57.875 33.333 0.00 0.00 0.00 3.91
38 39 8.352942 CCTGTTTATCTCCCACTTATTATTTGC 58.647 37.037 0.00 0.00 0.00 3.68
39 40 8.850156 CCCTGTTTATCTCCCACTTATTATTTG 58.150 37.037 0.00 0.00 0.00 2.32
40 41 8.787818 TCCCTGTTTATCTCCCACTTATTATTT 58.212 33.333 0.00 0.00 0.00 1.40
41 42 8.344939 TCCCTGTTTATCTCCCACTTATTATT 57.655 34.615 0.00 0.00 0.00 1.40
42 43 7.947782 TCCCTGTTTATCTCCCACTTATTAT 57.052 36.000 0.00 0.00 0.00 1.28
43 44 7.637301 GCTTCCCTGTTTATCTCCCACTTATTA 60.637 40.741 0.00 0.00 0.00 0.98
44 45 6.652205 TTCCCTGTTTATCTCCCACTTATT 57.348 37.500 0.00 0.00 0.00 1.40
45 46 5.398012 GCTTCCCTGTTTATCTCCCACTTAT 60.398 44.000 0.00 0.00 0.00 1.73
46 47 4.080526 GCTTCCCTGTTTATCTCCCACTTA 60.081 45.833 0.00 0.00 0.00 2.24
47 48 3.308473 GCTTCCCTGTTTATCTCCCACTT 60.308 47.826 0.00 0.00 0.00 3.16
48 49 2.239907 GCTTCCCTGTTTATCTCCCACT 59.760 50.000 0.00 0.00 0.00 4.00
49 50 2.644676 GCTTCCCTGTTTATCTCCCAC 58.355 52.381 0.00 0.00 0.00 4.61
50 51 1.564348 GGCTTCCCTGTTTATCTCCCA 59.436 52.381 0.00 0.00 0.00 4.37
51 52 1.133761 GGGCTTCCCTGTTTATCTCCC 60.134 57.143 0.00 0.00 41.34 4.30
52 53 1.475213 CGGGCTTCCCTGTTTATCTCC 60.475 57.143 0.00 0.00 42.67 3.71
53 54 1.485066 TCGGGCTTCCCTGTTTATCTC 59.515 52.381 0.00 0.00 42.67 2.75
54 55 1.209747 GTCGGGCTTCCCTGTTTATCT 59.790 52.381 0.00 0.00 42.67 1.98
55 56 1.065709 TGTCGGGCTTCCCTGTTTATC 60.066 52.381 0.00 0.00 42.67 1.75
56 57 0.988832 TGTCGGGCTTCCCTGTTTAT 59.011 50.000 0.00 0.00 42.67 1.40
57 58 0.766131 TTGTCGGGCTTCCCTGTTTA 59.234 50.000 0.00 0.00 42.67 2.01
58 59 0.106419 TTTGTCGGGCTTCCCTGTTT 60.106 50.000 0.00 0.00 42.67 2.83
59 60 0.822121 GTTTGTCGGGCTTCCCTGTT 60.822 55.000 0.00 0.00 42.67 3.16
60 61 1.228154 GTTTGTCGGGCTTCCCTGT 60.228 57.895 0.00 0.00 42.67 4.00
61 62 1.971695 GGTTTGTCGGGCTTCCCTG 60.972 63.158 0.00 0.00 42.67 4.45
62 63 0.838987 TAGGTTTGTCGGGCTTCCCT 60.839 55.000 0.00 0.00 42.67 4.20
63 64 0.392595 CTAGGTTTGTCGGGCTTCCC 60.393 60.000 0.00 0.00 41.09 3.97
64 65 0.611714 TCTAGGTTTGTCGGGCTTCC 59.388 55.000 0.00 0.00 0.00 3.46
65 66 1.675116 GGTCTAGGTTTGTCGGGCTTC 60.675 57.143 0.00 0.00 0.00 3.86
66 67 0.323957 GGTCTAGGTTTGTCGGGCTT 59.676 55.000 0.00 0.00 0.00 4.35
67 68 1.551019 GGGTCTAGGTTTGTCGGGCT 61.551 60.000 0.00 0.00 0.00 5.19
68 69 1.078637 GGGTCTAGGTTTGTCGGGC 60.079 63.158 0.00 0.00 0.00 6.13
69 70 0.908180 AGGGGTCTAGGTTTGTCGGG 60.908 60.000 0.00 0.00 0.00 5.14
70 71 0.981943 AAGGGGTCTAGGTTTGTCGG 59.018 55.000 0.00 0.00 0.00 4.79
71 72 2.038033 TGAAAGGGGTCTAGGTTTGTCG 59.962 50.000 0.00 0.00 0.00 4.35
72 73 3.676093 CTGAAAGGGGTCTAGGTTTGTC 58.324 50.000 0.00 0.00 0.00 3.18
73 74 3.790089 CTGAAAGGGGTCTAGGTTTGT 57.210 47.619 0.00 0.00 0.00 2.83
94 95 0.842635 ATGAGGAGGAGAATGGGCAC 59.157 55.000 0.00 0.00 0.00 5.01
95 96 0.841961 CATGAGGAGGAGAATGGGCA 59.158 55.000 0.00 0.00 0.00 5.36
96 97 1.072015 CTCATGAGGAGGAGAATGGGC 59.928 57.143 15.38 0.00 40.13 5.36
97 98 1.072015 GCTCATGAGGAGGAGAATGGG 59.928 57.143 23.89 0.00 44.22 4.00
98 99 1.767088 TGCTCATGAGGAGGAGAATGG 59.233 52.381 23.89 0.00 44.22 3.16
99 100 3.555527 TTGCTCATGAGGAGGAGAATG 57.444 47.619 23.89 0.00 45.34 2.67
100 101 4.792513 AATTGCTCATGAGGAGGAGAAT 57.207 40.909 23.89 8.59 45.34 2.40
101 102 5.698741 TTAATTGCTCATGAGGAGGAGAA 57.301 39.130 23.89 10.98 45.34 2.87
102 103 5.678583 CTTTAATTGCTCATGAGGAGGAGA 58.321 41.667 23.89 6.83 45.34 3.71
103 104 4.275443 GCTTTAATTGCTCATGAGGAGGAG 59.725 45.833 23.89 14.87 45.34 3.69
104 105 4.080129 AGCTTTAATTGCTCATGAGGAGGA 60.080 41.667 23.89 7.98 44.22 3.71
105 106 4.036498 CAGCTTTAATTGCTCATGAGGAGG 59.964 45.833 23.89 9.24 44.22 4.30
106 107 4.880120 TCAGCTTTAATTGCTCATGAGGAG 59.120 41.667 23.89 9.46 46.93 3.69
107 108 4.637534 GTCAGCTTTAATTGCTCATGAGGA 59.362 41.667 23.89 19.17 38.92 3.71
108 109 4.639310 AGTCAGCTTTAATTGCTCATGAGG 59.361 41.667 23.89 5.96 38.92 3.86
109 110 5.814764 AGTCAGCTTTAATTGCTCATGAG 57.185 39.130 18.84 18.84 38.92 2.90
110 111 5.706833 TGAAGTCAGCTTTAATTGCTCATGA 59.293 36.000 0.00 0.00 38.92 3.07
111 112 5.946298 TGAAGTCAGCTTTAATTGCTCATG 58.054 37.500 1.13 0.00 38.92 3.07
112 113 6.770746 ATGAAGTCAGCTTTAATTGCTCAT 57.229 33.333 1.13 0.59 38.92 2.90
113 114 7.686438 TTATGAAGTCAGCTTTAATTGCTCA 57.314 32.000 1.13 0.00 38.92 4.26
141 142 8.995027 TGTTATTATGGCCTATGAATGTTTCT 57.005 30.769 3.32 0.00 0.00 2.52
143 144 9.985730 CAATGTTATTATGGCCTATGAATGTTT 57.014 29.630 3.32 0.00 0.00 2.83
144 145 8.090214 GCAATGTTATTATGGCCTATGAATGTT 58.910 33.333 3.32 0.00 0.00 2.71
145 146 7.309990 GGCAATGTTATTATGGCCTATGAATGT 60.310 37.037 3.32 0.00 42.79 2.71
146 147 7.037438 GGCAATGTTATTATGGCCTATGAATG 58.963 38.462 3.32 0.00 42.79 2.67
147 148 6.725369 TGGCAATGTTATTATGGCCTATGAAT 59.275 34.615 3.32 0.67 45.71 2.57
148 149 6.073981 TGGCAATGTTATTATGGCCTATGAA 58.926 36.000 3.32 0.00 45.71 2.57
149 150 5.639139 TGGCAATGTTATTATGGCCTATGA 58.361 37.500 3.32 0.00 45.71 2.15
150 151 5.477984 ACTGGCAATGTTATTATGGCCTATG 59.522 40.000 3.32 0.02 45.71 2.23
151 152 5.477984 CACTGGCAATGTTATTATGGCCTAT 59.522 40.000 3.32 0.00 45.71 2.57
152 153 4.826733 CACTGGCAATGTTATTATGGCCTA 59.173 41.667 3.32 0.00 45.71 3.93
153 154 3.638160 CACTGGCAATGTTATTATGGCCT 59.362 43.478 3.32 0.00 45.71 5.19
154 155 3.636300 TCACTGGCAATGTTATTATGGCC 59.364 43.478 0.00 0.00 45.72 5.36
155 156 4.916983 TCACTGGCAATGTTATTATGGC 57.083 40.909 0.00 0.00 39.81 4.40
156 157 6.698008 TCTTCACTGGCAATGTTATTATGG 57.302 37.500 0.00 0.00 0.00 2.74
157 158 7.365741 GGATCTTCACTGGCAATGTTATTATG 58.634 38.462 0.00 0.00 0.00 1.90
158 159 6.205464 CGGATCTTCACTGGCAATGTTATTAT 59.795 38.462 0.00 0.00 0.00 1.28
159 160 5.527214 CGGATCTTCACTGGCAATGTTATTA 59.473 40.000 0.00 0.00 0.00 0.98
160 161 4.336433 CGGATCTTCACTGGCAATGTTATT 59.664 41.667 0.00 0.00 0.00 1.40
161 162 3.879295 CGGATCTTCACTGGCAATGTTAT 59.121 43.478 0.00 0.00 0.00 1.89
162 163 3.055458 TCGGATCTTCACTGGCAATGTTA 60.055 43.478 0.00 0.00 0.00 2.41
163 164 2.086869 CGGATCTTCACTGGCAATGTT 58.913 47.619 0.00 0.00 0.00 2.71
164 165 1.278985 TCGGATCTTCACTGGCAATGT 59.721 47.619 0.00 0.00 0.00 2.71
165 166 1.667724 GTCGGATCTTCACTGGCAATG 59.332 52.381 0.00 0.00 0.00 2.82
166 167 1.556911 AGTCGGATCTTCACTGGCAAT 59.443 47.619 0.00 0.00 0.00 3.56
167 168 0.976641 AGTCGGATCTTCACTGGCAA 59.023 50.000 0.00 0.00 0.00 4.52
168 169 1.751351 CTAGTCGGATCTTCACTGGCA 59.249 52.381 0.00 0.00 0.00 4.92
169 170 1.067821 CCTAGTCGGATCTTCACTGGC 59.932 57.143 0.00 0.00 33.16 4.85
170 171 2.656002 TCCTAGTCGGATCTTCACTGG 58.344 52.381 0.00 0.00 36.69 4.00
171 172 4.339530 TCATTCCTAGTCGGATCTTCACTG 59.660 45.833 0.00 0.00 42.70 3.66
172 173 4.537751 TCATTCCTAGTCGGATCTTCACT 58.462 43.478 0.00 0.00 42.70 3.41
173 174 4.920640 TCATTCCTAGTCGGATCTTCAC 57.079 45.455 0.00 0.00 42.70 3.18
174 175 5.682471 GCTTTCATTCCTAGTCGGATCTTCA 60.682 44.000 0.00 0.00 42.70 3.02
175 176 4.747605 GCTTTCATTCCTAGTCGGATCTTC 59.252 45.833 0.00 0.00 42.70 2.87
176 177 4.162320 TGCTTTCATTCCTAGTCGGATCTT 59.838 41.667 0.00 0.00 42.70 2.40
177 178 3.706594 TGCTTTCATTCCTAGTCGGATCT 59.293 43.478 0.00 0.00 42.70 2.75
178 179 3.804873 GTGCTTTCATTCCTAGTCGGATC 59.195 47.826 0.00 0.00 42.70 3.36
179 180 3.452627 AGTGCTTTCATTCCTAGTCGGAT 59.547 43.478 0.00 0.00 42.70 4.18
180 181 2.832129 AGTGCTTTCATTCCTAGTCGGA 59.168 45.455 0.00 0.00 41.06 4.55
181 182 3.252974 AGTGCTTTCATTCCTAGTCGG 57.747 47.619 0.00 0.00 0.00 4.79
182 183 4.670221 GCAAAGTGCTTTCATTCCTAGTCG 60.670 45.833 0.00 0.00 40.96 4.18
183 184 4.670221 CGCAAAGTGCTTTCATTCCTAGTC 60.670 45.833 0.00 0.00 42.25 2.59
184 185 3.189287 CGCAAAGTGCTTTCATTCCTAGT 59.811 43.478 0.00 0.00 42.25 2.57
185 186 3.189287 ACGCAAAGTGCTTTCATTCCTAG 59.811 43.478 0.00 0.00 42.25 3.02
186 187 3.146066 ACGCAAAGTGCTTTCATTCCTA 58.854 40.909 0.00 0.00 42.25 2.94
187 188 1.956477 ACGCAAAGTGCTTTCATTCCT 59.044 42.857 0.00 0.00 42.25 3.36
188 189 2.422276 ACGCAAAGTGCTTTCATTCC 57.578 45.000 0.00 0.00 42.25 3.01
189 190 3.796178 TGAAACGCAAAGTGCTTTCATTC 59.204 39.130 16.69 7.83 41.18 2.67
190 191 3.551485 GTGAAACGCAAAGTGCTTTCATT 59.449 39.130 20.38 3.35 44.18 2.57
191 192 3.115554 GTGAAACGCAAAGTGCTTTCAT 58.884 40.909 20.38 0.00 44.18 2.57
192 193 2.163412 AGTGAAACGCAAAGTGCTTTCA 59.837 40.909 16.69 16.69 45.86 2.69
193 194 2.797491 AGTGAAACGCAAAGTGCTTTC 58.203 42.857 13.52 13.52 45.86 2.62
194 195 2.939460 AGTGAAACGCAAAGTGCTTT 57.061 40.000 0.00 0.00 45.86 3.51
195 196 2.943033 ACTAGTGAAACGCAAAGTGCTT 59.057 40.909 0.00 0.00 45.86 3.91
196 197 2.561569 ACTAGTGAAACGCAAAGTGCT 58.438 42.857 0.00 0.00 45.86 4.40
197 198 4.461992 TTACTAGTGAAACGCAAAGTGC 57.538 40.909 5.39 0.00 45.86 4.40
198 199 5.985781 ACATTACTAGTGAAACGCAAAGTG 58.014 37.500 5.39 0.00 45.86 3.16
199 200 5.756347 TGACATTACTAGTGAAACGCAAAGT 59.244 36.000 5.39 0.00 45.86 2.66
200 201 6.223138 TGACATTACTAGTGAAACGCAAAG 57.777 37.500 5.39 0.00 45.86 2.77
201 202 5.178623 CCTGACATTACTAGTGAAACGCAAA 59.821 40.000 5.39 0.00 45.86 3.68
202 203 4.688879 CCTGACATTACTAGTGAAACGCAA 59.311 41.667 5.39 0.00 45.86 4.85
203 204 4.021807 TCCTGACATTACTAGTGAAACGCA 60.022 41.667 5.39 0.00 45.86 5.24
204 205 4.491676 TCCTGACATTACTAGTGAAACGC 58.508 43.478 5.39 0.00 45.86 4.84
205 206 5.577164 CCTTCCTGACATTACTAGTGAAACG 59.423 44.000 5.39 0.00 45.86 3.60
206 207 6.698380 TCCTTCCTGACATTACTAGTGAAAC 58.302 40.000 5.39 0.00 0.00 2.78
207 208 6.928348 TCCTTCCTGACATTACTAGTGAAA 57.072 37.500 5.39 0.00 0.00 2.69
208 209 6.928348 TTCCTTCCTGACATTACTAGTGAA 57.072 37.500 5.39 0.00 0.00 3.18
209 210 6.928348 TTTCCTTCCTGACATTACTAGTGA 57.072 37.500 5.39 0.00 0.00 3.41
210 211 7.162082 AGTTTTCCTTCCTGACATTACTAGTG 58.838 38.462 5.39 0.00 0.00 2.74
211 212 7.317722 AGTTTTCCTTCCTGACATTACTAGT 57.682 36.000 0.00 0.00 0.00 2.57
212 213 8.622948 AAAGTTTTCCTTCCTGACATTACTAG 57.377 34.615 0.00 0.00 31.27 2.57
214 215 8.990163 TTAAAGTTTTCCTTCCTGACATTACT 57.010 30.769 0.00 0.00 31.27 2.24
215 216 7.808381 GCTTAAAGTTTTCCTTCCTGACATTAC 59.192 37.037 0.00 0.00 31.27 1.89
216 217 7.039993 GGCTTAAAGTTTTCCTTCCTGACATTA 60.040 37.037 0.00 0.00 31.27 1.90
217 218 6.239317 GGCTTAAAGTTTTCCTTCCTGACATT 60.239 38.462 0.00 0.00 31.27 2.71
218 219 5.243954 GGCTTAAAGTTTTCCTTCCTGACAT 59.756 40.000 0.00 0.00 31.27 3.06
219 220 4.583073 GGCTTAAAGTTTTCCTTCCTGACA 59.417 41.667 0.00 0.00 31.27 3.58
220 221 4.827835 AGGCTTAAAGTTTTCCTTCCTGAC 59.172 41.667 0.00 0.00 31.27 3.51
221 222 5.061721 AGGCTTAAAGTTTTCCTTCCTGA 57.938 39.130 0.00 0.00 31.27 3.86
222 223 5.106118 GCTAGGCTTAAAGTTTTCCTTCCTG 60.106 44.000 0.00 1.73 31.27 3.86
223 224 5.010933 GCTAGGCTTAAAGTTTTCCTTCCT 58.989 41.667 0.00 5.06 31.27 3.36
224 225 5.010933 AGCTAGGCTTAAAGTTTTCCTTCC 58.989 41.667 0.00 0.00 33.89 3.46
225 226 5.620205 GCAGCTAGGCTTAAAGTTTTCCTTC 60.620 44.000 0.00 3.62 36.40 3.46
226 227 4.218635 GCAGCTAGGCTTAAAGTTTTCCTT 59.781 41.667 0.00 0.00 36.40 3.36
227 228 3.759086 GCAGCTAGGCTTAAAGTTTTCCT 59.241 43.478 0.00 1.46 36.40 3.36
228 229 3.119459 GGCAGCTAGGCTTAAAGTTTTCC 60.119 47.826 0.00 0.00 36.40 3.13
229 230 3.506067 TGGCAGCTAGGCTTAAAGTTTTC 59.494 43.478 0.00 0.00 44.55 2.29
230 231 3.496331 TGGCAGCTAGGCTTAAAGTTTT 58.504 40.909 0.00 0.00 44.55 2.43
231 232 3.154827 TGGCAGCTAGGCTTAAAGTTT 57.845 42.857 0.00 0.00 44.55 2.66
232 233 2.820197 GTTGGCAGCTAGGCTTAAAGTT 59.180 45.455 0.00 0.00 44.55 2.66
233 234 2.224769 TGTTGGCAGCTAGGCTTAAAGT 60.225 45.455 2.28 0.00 44.55 2.66
234 235 2.436417 TGTTGGCAGCTAGGCTTAAAG 58.564 47.619 2.28 0.00 44.55 1.85
235 236 2.577606 TGTTGGCAGCTAGGCTTAAA 57.422 45.000 2.28 0.00 44.55 1.52
236 237 2.806945 ATGTTGGCAGCTAGGCTTAA 57.193 45.000 2.28 0.00 44.55 1.85
237 238 2.806945 AATGTTGGCAGCTAGGCTTA 57.193 45.000 2.28 0.00 44.55 3.09
238 239 1.928868 AAATGTTGGCAGCTAGGCTT 58.071 45.000 2.28 0.00 44.55 4.35
239 240 1.928868 AAAATGTTGGCAGCTAGGCT 58.071 45.000 2.28 0.00 44.55 4.58
240 241 2.340337 CAAAAATGTTGGCAGCTAGGC 58.660 47.619 2.28 0.00 44.50 3.93
241 242 2.288948 TGCAAAAATGTTGGCAGCTAGG 60.289 45.455 2.28 0.00 38.84 3.02
242 243 3.029320 TGCAAAAATGTTGGCAGCTAG 57.971 42.857 2.28 0.00 38.84 3.42
243 244 3.465742 TTGCAAAAATGTTGGCAGCTA 57.534 38.095 0.00 0.00 44.60 3.32
244 245 2.328819 TTGCAAAAATGTTGGCAGCT 57.671 40.000 0.00 0.00 44.60 4.24
245 246 2.548904 TCATTGCAAAAATGTTGGCAGC 59.451 40.909 1.71 0.00 44.60 5.25
246 247 3.810941 AGTCATTGCAAAAATGTTGGCAG 59.189 39.130 1.71 0.00 44.60 4.85
247 248 3.806380 AGTCATTGCAAAAATGTTGGCA 58.194 36.364 1.71 0.00 42.18 4.92
248 249 4.816786 AAGTCATTGCAAAAATGTTGGC 57.183 36.364 1.71 0.00 33.86 4.52
249 250 9.421806 TCTATAAAGTCATTGCAAAAATGTTGG 57.578 29.630 1.71 0.00 0.00 3.77
251 252 9.423061 GGTCTATAAAGTCATTGCAAAAATGTT 57.577 29.630 1.71 0.00 0.00 2.71
252 253 8.584157 TGGTCTATAAAGTCATTGCAAAAATGT 58.416 29.630 1.71 0.00 0.00 2.71
253 254 8.863049 GTGGTCTATAAAGTCATTGCAAAAATG 58.137 33.333 1.71 0.00 0.00 2.32
254 255 8.806146 AGTGGTCTATAAAGTCATTGCAAAAAT 58.194 29.630 1.71 0.00 0.00 1.82
255 256 8.081633 CAGTGGTCTATAAAGTCATTGCAAAAA 58.918 33.333 1.71 0.00 0.00 1.94
256 257 7.592938 CAGTGGTCTATAAAGTCATTGCAAAA 58.407 34.615 1.71 0.00 0.00 2.44
257 258 6.349280 GCAGTGGTCTATAAAGTCATTGCAAA 60.349 38.462 1.71 0.00 38.79 3.68
258 259 5.123820 GCAGTGGTCTATAAAGTCATTGCAA 59.876 40.000 0.00 0.00 38.79 4.08
259 260 4.635765 GCAGTGGTCTATAAAGTCATTGCA 59.364 41.667 0.00 0.00 38.79 4.08
260 261 4.635765 TGCAGTGGTCTATAAAGTCATTGC 59.364 41.667 0.00 0.00 39.06 3.56
261 262 6.932356 ATGCAGTGGTCTATAAAGTCATTG 57.068 37.500 0.00 0.00 0.00 2.82
262 263 7.944729 AAATGCAGTGGTCTATAAAGTCATT 57.055 32.000 0.00 0.00 0.00 2.57
263 264 7.944729 AAAATGCAGTGGTCTATAAAGTCAT 57.055 32.000 0.00 0.00 0.00 3.06
264 265 7.759489 AAAAATGCAGTGGTCTATAAAGTCA 57.241 32.000 0.00 0.00 0.00 3.41
286 287 2.346099 GCTTGGCAGCGTGATAAAAA 57.654 45.000 0.00 0.00 35.91 1.94
296 297 1.312815 CTTATAGGTGGCTTGGCAGC 58.687 55.000 16.76 16.76 46.52 5.25
297 298 1.972872 CCTTATAGGTGGCTTGGCAG 58.027 55.000 0.00 0.00 0.00 4.85
308 309 9.132923 TCAAGTTCATAGAGTGTACCTTATAGG 57.867 37.037 0.00 0.00 42.49 2.57
310 311 9.916360 TCTCAAGTTCATAGAGTGTACCTTATA 57.084 33.333 0.00 0.00 0.00 0.98
311 312 8.824756 TCTCAAGTTCATAGAGTGTACCTTAT 57.175 34.615 0.00 0.00 0.00 1.73
312 313 8.824756 ATCTCAAGTTCATAGAGTGTACCTTA 57.175 34.615 0.00 0.00 0.00 2.69
313 314 7.726033 ATCTCAAGTTCATAGAGTGTACCTT 57.274 36.000 0.00 0.00 0.00 3.50
314 315 7.726033 AATCTCAAGTTCATAGAGTGTACCT 57.274 36.000 0.00 0.00 0.00 3.08
315 316 8.467598 TGTAATCTCAAGTTCATAGAGTGTACC 58.532 37.037 0.00 0.00 0.00 3.34
316 317 9.291664 GTGTAATCTCAAGTTCATAGAGTGTAC 57.708 37.037 0.00 0.00 0.00 2.90
317 318 9.244292 AGTGTAATCTCAAGTTCATAGAGTGTA 57.756 33.333 0.00 0.00 0.00 2.90
318 319 8.031864 CAGTGTAATCTCAAGTTCATAGAGTGT 58.968 37.037 0.00 0.00 0.00 3.55
319 320 7.009999 GCAGTGTAATCTCAAGTTCATAGAGTG 59.990 40.741 0.00 0.00 0.00 3.51
320 321 7.038659 GCAGTGTAATCTCAAGTTCATAGAGT 58.961 38.462 0.00 0.00 0.00 3.24
321 322 6.478344 GGCAGTGTAATCTCAAGTTCATAGAG 59.522 42.308 0.00 0.00 0.00 2.43
322 323 6.341316 GGCAGTGTAATCTCAAGTTCATAGA 58.659 40.000 0.00 0.00 0.00 1.98
323 324 5.525378 GGGCAGTGTAATCTCAAGTTCATAG 59.475 44.000 0.00 0.00 0.00 2.23
324 325 5.428253 GGGCAGTGTAATCTCAAGTTCATA 58.572 41.667 0.00 0.00 0.00 2.15
325 326 4.265073 GGGCAGTGTAATCTCAAGTTCAT 58.735 43.478 0.00 0.00 0.00 2.57
326 327 3.559171 GGGGCAGTGTAATCTCAAGTTCA 60.559 47.826 0.00 0.00 0.00 3.18
327 328 3.010420 GGGGCAGTGTAATCTCAAGTTC 58.990 50.000 0.00 0.00 0.00 3.01
328 329 2.375174 TGGGGCAGTGTAATCTCAAGTT 59.625 45.455 0.00 0.00 0.00 2.66
329 330 1.985159 TGGGGCAGTGTAATCTCAAGT 59.015 47.619 0.00 0.00 0.00 3.16
330 331 2.359900 GTGGGGCAGTGTAATCTCAAG 58.640 52.381 0.00 0.00 0.00 3.02
331 332 1.004277 GGTGGGGCAGTGTAATCTCAA 59.996 52.381 0.00 0.00 0.00 3.02
332 333 0.618458 GGTGGGGCAGTGTAATCTCA 59.382 55.000 0.00 0.00 0.00 3.27
333 334 0.618458 TGGTGGGGCAGTGTAATCTC 59.382 55.000 0.00 0.00 0.00 2.75
334 335 1.064463 CATGGTGGGGCAGTGTAATCT 60.064 52.381 0.00 0.00 0.00 2.40
335 336 1.340991 ACATGGTGGGGCAGTGTAATC 60.341 52.381 0.00 0.00 0.00 1.75
336 337 0.704076 ACATGGTGGGGCAGTGTAAT 59.296 50.000 0.00 0.00 0.00 1.89
337 338 0.251121 CACATGGTGGGGCAGTGTAA 60.251 55.000 0.00 0.00 0.00 2.41
338 339 1.378378 CACATGGTGGGGCAGTGTA 59.622 57.895 0.00 0.00 0.00 2.90
339 340 2.115910 CACATGGTGGGGCAGTGT 59.884 61.111 0.00 0.00 0.00 3.55
348 349 3.397921 GCAACCGCTAACCACATGGTG 62.398 57.143 3.82 0.00 40.91 4.17
349 350 1.241315 GCAACCGCTAACCACATGGT 61.241 55.000 0.00 0.00 42.67 3.55
350 351 1.506262 GCAACCGCTAACCACATGG 59.494 57.895 0.00 0.00 36.77 3.66
361 362 1.081442 CCCGAGAAAAAGCAACCGC 60.081 57.895 0.00 0.00 38.99 5.68
362 363 0.948678 TTCCCGAGAAAAAGCAACCG 59.051 50.000 0.00 0.00 0.00 4.44
363 364 3.446310 TTTTCCCGAGAAAAAGCAACC 57.554 42.857 1.96 0.00 46.45 3.77
408 409 9.638239 ACATTTTACGAATGCTTGATTAACATT 57.362 25.926 0.00 0.00 36.74 2.71
409 410 9.638239 AACATTTTACGAATGCTTGATTAACAT 57.362 25.926 0.00 0.00 0.00 2.71
410 411 8.910666 CAACATTTTACGAATGCTTGATTAACA 58.089 29.630 0.00 0.00 0.00 2.41
411 412 9.123709 TCAACATTTTACGAATGCTTGATTAAC 57.876 29.630 0.00 0.00 30.46 2.01
412 413 9.684448 TTCAACATTTTACGAATGCTTGATTAA 57.316 25.926 12.76 0.00 32.88 1.40
413 414 9.853555 ATTCAACATTTTACGAATGCTTGATTA 57.146 25.926 12.76 5.28 32.88 1.75
414 415 8.761575 ATTCAACATTTTACGAATGCTTGATT 57.238 26.923 12.76 9.31 32.88 2.57
415 416 8.761575 AATTCAACATTTTACGAATGCTTGAT 57.238 26.923 12.76 3.38 32.88 2.57
416 417 8.486383 CAAATTCAACATTTTACGAATGCTTGA 58.514 29.630 0.00 0.00 31.94 3.02
417 418 8.274939 ACAAATTCAACATTTTACGAATGCTTG 58.725 29.630 0.00 0.00 0.00 4.01
418 419 8.364129 ACAAATTCAACATTTTACGAATGCTT 57.636 26.923 0.00 0.00 0.00 3.91
419 420 7.945033 ACAAATTCAACATTTTACGAATGCT 57.055 28.000 0.00 0.00 0.00 3.79
539 540 8.921670 GCATCTTTTAAATAAATGGTCAACGTT 58.078 29.630 0.00 0.00 0.00 3.99
540 541 8.303876 AGCATCTTTTAAATAAATGGTCAACGT 58.696 29.630 0.00 0.00 0.00 3.99
541 542 8.687824 AGCATCTTTTAAATAAATGGTCAACG 57.312 30.769 0.00 0.00 0.00 4.10
577 578 9.921637 GGTCCAATACTTGATTAACATTTTCAA 57.078 29.630 0.00 0.00 0.00 2.69
578 579 8.240682 CGGTCCAATACTTGATTAACATTTTCA 58.759 33.333 0.00 0.00 0.00 2.69
579 580 7.700656 CCGGTCCAATACTTGATTAACATTTTC 59.299 37.037 0.00 0.00 0.00 2.29
580 581 7.543756 CCGGTCCAATACTTGATTAACATTTT 58.456 34.615 0.00 0.00 0.00 1.82
581 582 6.405397 GCCGGTCCAATACTTGATTAACATTT 60.405 38.462 1.90 0.00 0.00 2.32
582 583 5.067283 GCCGGTCCAATACTTGATTAACATT 59.933 40.000 1.90 0.00 0.00 2.71
583 584 4.578928 GCCGGTCCAATACTTGATTAACAT 59.421 41.667 1.90 0.00 0.00 2.71
584 585 3.942748 GCCGGTCCAATACTTGATTAACA 59.057 43.478 1.90 0.00 0.00 2.41
585 586 3.001939 CGCCGGTCCAATACTTGATTAAC 59.998 47.826 1.90 0.00 0.00 2.01
586 587 3.118702 TCGCCGGTCCAATACTTGATTAA 60.119 43.478 1.90 0.00 0.00 1.40
587 588 2.431419 TCGCCGGTCCAATACTTGATTA 59.569 45.455 1.90 0.00 0.00 1.75
588 589 1.208535 TCGCCGGTCCAATACTTGATT 59.791 47.619 1.90 0.00 0.00 2.57
589 590 0.828022 TCGCCGGTCCAATACTTGAT 59.172 50.000 1.90 0.00 0.00 2.57
590 591 0.174845 CTCGCCGGTCCAATACTTGA 59.825 55.000 1.90 0.00 0.00 3.02
591 592 0.174845 TCTCGCCGGTCCAATACTTG 59.825 55.000 1.90 0.00 0.00 3.16
592 593 0.175073 GTCTCGCCGGTCCAATACTT 59.825 55.000 1.90 0.00 0.00 2.24
593 594 0.968901 TGTCTCGCCGGTCCAATACT 60.969 55.000 1.90 0.00 0.00 2.12
594 595 0.104304 ATGTCTCGCCGGTCCAATAC 59.896 55.000 1.90 0.00 0.00 1.89
595 596 1.611977 CTATGTCTCGCCGGTCCAATA 59.388 52.381 1.90 0.00 0.00 1.90
596 597 0.389391 CTATGTCTCGCCGGTCCAAT 59.611 55.000 1.90 0.00 0.00 3.16
597 598 0.681887 TCTATGTCTCGCCGGTCCAA 60.682 55.000 1.90 0.00 0.00 3.53
598 599 0.681887 TTCTATGTCTCGCCGGTCCA 60.682 55.000 1.90 0.00 0.00 4.02
599 600 0.248949 GTTCTATGTCTCGCCGGTCC 60.249 60.000 1.90 0.00 0.00 4.46
600 601 0.591741 CGTTCTATGTCTCGCCGGTC 60.592 60.000 1.90 0.00 0.00 4.79
601 602 1.028330 TCGTTCTATGTCTCGCCGGT 61.028 55.000 1.90 0.00 0.00 5.28
602 603 0.317103 CTCGTTCTATGTCTCGCCGG 60.317 60.000 0.00 0.00 0.00 6.13
603 604 0.377554 ACTCGTTCTATGTCTCGCCG 59.622 55.000 0.00 0.00 0.00 6.46
604 605 3.900388 ATACTCGTTCTATGTCTCGCC 57.100 47.619 0.00 0.00 0.00 5.54
605 606 3.975670 CCAATACTCGTTCTATGTCTCGC 59.024 47.826 0.00 0.00 0.00 5.03
606 607 5.206299 GTCCAATACTCGTTCTATGTCTCG 58.794 45.833 0.00 0.00 0.00 4.04
607 608 5.521544 GGTCCAATACTCGTTCTATGTCTC 58.478 45.833 0.00 0.00 0.00 3.36
608 609 4.036498 CGGTCCAATACTCGTTCTATGTCT 59.964 45.833 0.00 0.00 0.00 3.41
609 610 4.288531 CGGTCCAATACTCGTTCTATGTC 58.711 47.826 0.00 0.00 0.00 3.06
610 611 3.067742 CCGGTCCAATACTCGTTCTATGT 59.932 47.826 0.00 0.00 0.00 2.29
611 612 3.639538 CCGGTCCAATACTCGTTCTATG 58.360 50.000 0.00 0.00 0.00 2.23
612 613 2.035576 GCCGGTCCAATACTCGTTCTAT 59.964 50.000 1.90 0.00 0.00 1.98
613 614 1.406539 GCCGGTCCAATACTCGTTCTA 59.593 52.381 1.90 0.00 0.00 2.10
614 615 0.175073 GCCGGTCCAATACTCGTTCT 59.825 55.000 1.90 0.00 0.00 3.01
615 616 1.143969 CGCCGGTCCAATACTCGTTC 61.144 60.000 1.90 0.00 0.00 3.95
616 617 1.153706 CGCCGGTCCAATACTCGTT 60.154 57.895 1.90 0.00 0.00 3.85
617 618 2.493030 CGCCGGTCCAATACTCGT 59.507 61.111 1.90 0.00 0.00 4.18
618 619 2.960129 GCGCCGGTCCAATACTCG 60.960 66.667 1.90 0.00 0.00 4.18
619 620 2.960129 CGCGCCGGTCCAATACTC 60.960 66.667 1.90 0.00 0.00 2.59
631 632 4.090057 GTTCTTGTCCAGCGCGCC 62.090 66.667 30.33 13.41 0.00 6.53
632 633 4.430423 CGTTCTTGTCCAGCGCGC 62.430 66.667 26.66 26.66 0.00 6.86
633 634 1.626654 AATCGTTCTTGTCCAGCGCG 61.627 55.000 0.00 0.00 0.00 6.86
634 635 0.095417 GAATCGTTCTTGTCCAGCGC 59.905 55.000 0.00 0.00 0.00 5.92
635 636 1.428448 TGAATCGTTCTTGTCCAGCG 58.572 50.000 0.00 0.00 0.00 5.18
636 637 2.029728 CGATGAATCGTTCTTGTCCAGC 59.970 50.000 4.53 0.00 44.74 4.85
637 638 3.914555 CGATGAATCGTTCTTGTCCAG 57.085 47.619 4.53 0.00 44.74 3.86
649 650 4.861210 ACTAACATCCGTCTCGATGAATC 58.139 43.478 5.62 0.00 41.92 2.52
650 651 4.580995 AGACTAACATCCGTCTCGATGAAT 59.419 41.667 5.62 0.00 41.92 2.57
651 652 3.945921 AGACTAACATCCGTCTCGATGAA 59.054 43.478 5.62 0.00 41.92 2.57
652 653 3.542648 AGACTAACATCCGTCTCGATGA 58.457 45.455 5.62 0.00 41.92 2.92
653 654 3.879427 GAGACTAACATCCGTCTCGATG 58.121 50.000 3.97 0.00 44.45 3.84
658 659 1.752683 AGCGAGACTAACATCCGTCT 58.247 50.000 0.00 0.00 42.79 4.18
659 660 3.900388 ATAGCGAGACTAACATCCGTC 57.100 47.619 0.00 0.00 33.57 4.79
660 661 4.320348 GCTTATAGCGAGACTAACATCCGT 60.320 45.833 0.00 0.00 33.57 4.69
661 662 4.159857 GCTTATAGCGAGACTAACATCCG 58.840 47.826 0.00 0.00 33.57 4.18
675 676 4.264145 CGAATGCTATGTCTCGCTTATAGC 59.736 45.833 0.00 0.00 45.86 2.97
676 677 5.923486 CGAATGCTATGTCTCGCTTATAG 57.077 43.478 0.00 0.00 0.00 1.31
683 684 0.595053 ACCGCGAATGCTATGTCTCG 60.595 55.000 8.23 0.00 39.65 4.04
684 685 1.571919 AACCGCGAATGCTATGTCTC 58.428 50.000 8.23 0.00 39.65 3.36
685 686 2.882927 TAACCGCGAATGCTATGTCT 57.117 45.000 8.23 0.00 39.65 3.41
686 687 3.936902 TTTAACCGCGAATGCTATGTC 57.063 42.857 8.23 0.00 39.65 3.06
687 688 4.408694 GTTTTTAACCGCGAATGCTATGT 58.591 39.130 8.23 0.00 39.65 2.29
688 689 3.789224 GGTTTTTAACCGCGAATGCTATG 59.211 43.478 8.23 0.00 42.62 2.23
689 690 4.023739 GGTTTTTAACCGCGAATGCTAT 57.976 40.909 8.23 0.00 42.62 2.97
690 691 3.474693 GGTTTTTAACCGCGAATGCTA 57.525 42.857 8.23 0.00 42.62 3.49
691 692 2.341318 GGTTTTTAACCGCGAATGCT 57.659 45.000 8.23 0.00 42.62 3.79
756 757 9.575783 GTACTGGTTTTATTTGTTGTCTCAAAA 57.424 29.630 0.00 0.00 40.05 2.44
757 758 8.962679 AGTACTGGTTTTATTTGTTGTCTCAAA 58.037 29.630 0.00 0.00 40.74 2.69
758 759 8.402472 CAGTACTGGTTTTATTTGTTGTCTCAA 58.598 33.333 15.49 0.00 0.00 3.02
759 760 7.468084 GCAGTACTGGTTTTATTTGTTGTCTCA 60.468 37.037 23.95 0.00 0.00 3.27
760 761 6.856426 GCAGTACTGGTTTTATTTGTTGTCTC 59.144 38.462 23.95 0.00 0.00 3.36
761 762 6.320164 TGCAGTACTGGTTTTATTTGTTGTCT 59.680 34.615 23.95 0.00 0.00 3.41
762 763 6.500041 TGCAGTACTGGTTTTATTTGTTGTC 58.500 36.000 23.95 2.37 0.00 3.18
763 764 6.458232 TGCAGTACTGGTTTTATTTGTTGT 57.542 33.333 23.95 0.00 0.00 3.32
764 765 7.945033 ATTGCAGTACTGGTTTTATTTGTTG 57.055 32.000 23.95 0.00 0.00 3.33
765 766 8.956533 AAATTGCAGTACTGGTTTTATTTGTT 57.043 26.923 23.95 0.00 0.00 2.83
766 767 8.956533 AAAATTGCAGTACTGGTTTTATTTGT 57.043 26.923 23.95 0.00 0.00 2.83
792 793 7.539366 GCATGTATTTACTCGTTTGCCTAAAAA 59.461 33.333 0.00 0.00 0.00 1.94
793 794 7.024768 GCATGTATTTACTCGTTTGCCTAAAA 58.975 34.615 0.00 0.00 0.00 1.52
794 795 6.403855 GGCATGTATTTACTCGTTTGCCTAAA 60.404 38.462 3.47 0.00 43.86 1.85
795 796 5.065474 GGCATGTATTTACTCGTTTGCCTAA 59.935 40.000 3.47 0.00 43.86 2.69
796 797 4.573201 GGCATGTATTTACTCGTTTGCCTA 59.427 41.667 3.47 0.00 43.86 3.93
797 798 3.377172 GGCATGTATTTACTCGTTTGCCT 59.623 43.478 3.47 0.00 43.86 4.75
798 799 3.377172 AGGCATGTATTTACTCGTTTGCC 59.623 43.478 2.47 2.47 46.78 4.52
799 800 4.495844 GGAGGCATGTATTTACTCGTTTGC 60.496 45.833 0.00 0.00 0.00 3.68
800 801 4.876107 AGGAGGCATGTATTTACTCGTTTG 59.124 41.667 0.00 0.00 0.00 2.93
801 802 5.099042 AGGAGGCATGTATTTACTCGTTT 57.901 39.130 0.00 0.00 0.00 3.60
802 803 4.694339 GAGGAGGCATGTATTTACTCGTT 58.306 43.478 0.00 0.00 0.00 3.85
803 804 3.243434 CGAGGAGGCATGTATTTACTCGT 60.243 47.826 14.15 0.00 40.96 4.18
804 805 3.309388 CGAGGAGGCATGTATTTACTCG 58.691 50.000 10.47 10.47 40.19 4.18
805 806 4.299978 GACGAGGAGGCATGTATTTACTC 58.700 47.826 0.00 0.00 0.00 2.59
806 807 3.243434 CGACGAGGAGGCATGTATTTACT 60.243 47.826 0.00 0.00 0.00 2.24
807 808 3.050619 CGACGAGGAGGCATGTATTTAC 58.949 50.000 0.00 0.00 0.00 2.01
808 809 2.691526 ACGACGAGGAGGCATGTATTTA 59.308 45.455 0.00 0.00 0.00 1.40
809 810 1.480954 ACGACGAGGAGGCATGTATTT 59.519 47.619 0.00 0.00 0.00 1.40
810 811 1.112113 ACGACGAGGAGGCATGTATT 58.888 50.000 0.00 0.00 0.00 1.89
811 812 0.385751 CACGACGAGGAGGCATGTAT 59.614 55.000 0.00 0.00 0.00 2.29
812 813 0.963856 ACACGACGAGGAGGCATGTA 60.964 55.000 0.00 0.00 0.00 2.29
813 814 2.214181 GACACGACGAGGAGGCATGT 62.214 60.000 0.00 0.00 0.00 3.21
814 815 1.517257 GACACGACGAGGAGGCATG 60.517 63.158 0.00 0.00 0.00 4.06
815 816 2.711922 GGACACGACGAGGAGGCAT 61.712 63.158 0.00 0.00 0.00 4.40
816 817 3.371063 GGACACGACGAGGAGGCA 61.371 66.667 0.00 0.00 0.00 4.75
817 818 4.477975 CGGACACGACGAGGAGGC 62.478 72.222 0.00 0.00 44.60 4.70
818 819 2.745100 TCGGACACGACGAGGAGG 60.745 66.667 0.00 0.00 45.59 4.30
823 824 1.162181 ACAAGACTCGGACACGACGA 61.162 55.000 0.00 0.00 45.59 4.20
824 825 0.997226 CACAAGACTCGGACACGACG 60.997 60.000 0.00 0.00 45.59 5.12
825 826 0.030369 ACACAAGACTCGGACACGAC 59.970 55.000 0.00 0.00 45.59 4.34
827 828 0.939577 CCACACAAGACTCGGACACG 60.940 60.000 0.00 0.00 42.74 4.49
828 829 0.387929 TCCACACAAGACTCGGACAC 59.612 55.000 0.00 0.00 0.00 3.67
829 830 1.068588 CTTCCACACAAGACTCGGACA 59.931 52.381 0.00 0.00 0.00 4.02
830 831 1.784525 CTTCCACACAAGACTCGGAC 58.215 55.000 0.00 0.00 0.00 4.79
831 832 0.033504 GCTTCCACACAAGACTCGGA 59.966 55.000 0.00 0.00 0.00 4.55
832 833 0.951040 GGCTTCCACACAAGACTCGG 60.951 60.000 0.00 0.00 0.00 4.63
833 834 0.951040 GGGCTTCCACACAAGACTCG 60.951 60.000 0.00 0.00 31.25 4.18
834 835 0.108585 TGGGCTTCCACACAAGACTC 59.891 55.000 0.00 0.00 35.21 3.36
835 836 0.773644 ATGGGCTTCCACACAAGACT 59.226 50.000 0.00 0.00 44.44 3.24
836 837 1.620822 AATGGGCTTCCACACAAGAC 58.379 50.000 0.00 0.00 44.44 3.01
837 838 3.153919 GTTAATGGGCTTCCACACAAGA 58.846 45.455 0.00 0.00 44.44 3.02
838 839 2.095263 CGTTAATGGGCTTCCACACAAG 60.095 50.000 0.00 0.00 44.44 3.16
839 840 1.883275 CGTTAATGGGCTTCCACACAA 59.117 47.619 0.00 0.00 44.44 3.33
840 841 1.072489 TCGTTAATGGGCTTCCACACA 59.928 47.619 0.00 0.00 44.44 3.72
841 842 1.816074 TCGTTAATGGGCTTCCACAC 58.184 50.000 0.00 0.00 44.44 3.82
842 843 2.432444 CTTCGTTAATGGGCTTCCACA 58.568 47.619 0.00 0.00 44.44 4.17
843 844 1.743394 CCTTCGTTAATGGGCTTCCAC 59.257 52.381 0.00 0.00 44.44 4.02
844 845 1.953311 GCCTTCGTTAATGGGCTTCCA 60.953 52.381 7.49 0.00 45.91 3.53
845 846 0.738975 GCCTTCGTTAATGGGCTTCC 59.261 55.000 7.49 0.00 41.20 3.46
846 847 0.738975 GGCCTTCGTTAATGGGCTTC 59.261 55.000 12.85 0.00 43.62 3.86
847 848 0.039035 TGGCCTTCGTTAATGGGCTT 59.961 50.000 3.32 0.00 45.25 4.35
856 857 2.361610 CATGGGCTGGCCTTCGTT 60.362 61.111 21.72 0.00 36.10 3.85
858 859 3.136123 CACATGGGCTGGCCTTCG 61.136 66.667 21.72 11.63 36.10 3.79
880 881 2.718073 GCTTTCTACTCCGGGCCGA 61.718 63.158 30.79 12.88 0.00 5.54
897 898 1.077716 AGATTGGGGTAGCGTTGGC 60.078 57.895 0.00 0.00 40.37 4.52
903 904 2.569404 CCCTAGATCAGATTGGGGTAGC 59.431 54.545 0.00 0.00 34.46 3.58
905 906 4.785173 ATCCCTAGATCAGATTGGGGTA 57.215 45.455 13.84 4.95 38.43 3.69
914 915 7.523380 GCAAATGGAAATGAATCCCTAGATCAG 60.523 40.741 0.00 0.00 38.82 2.90
915 916 6.266103 GCAAATGGAAATGAATCCCTAGATCA 59.734 38.462 0.00 0.00 38.82 2.92
929 930 2.938428 TGGTAGGGGCAAATGGAAAT 57.062 45.000 0.00 0.00 0.00 2.17
932 933 2.704190 TTTTGGTAGGGGCAAATGGA 57.296 45.000 0.00 0.00 0.00 3.41
934 935 2.159114 CGGATTTTGGTAGGGGCAAATG 60.159 50.000 0.00 0.00 0.00 2.32
935 936 2.107366 CGGATTTTGGTAGGGGCAAAT 58.893 47.619 0.00 0.00 0.00 2.32
936 937 1.075698 TCGGATTTTGGTAGGGGCAAA 59.924 47.619 0.00 0.00 0.00 3.68
937 938 0.699399 TCGGATTTTGGTAGGGGCAA 59.301 50.000 0.00 0.00 0.00 4.52
938 939 0.254747 CTCGGATTTTGGTAGGGGCA 59.745 55.000 0.00 0.00 0.00 5.36
939 940 1.101635 GCTCGGATTTTGGTAGGGGC 61.102 60.000 0.00 0.00 0.00 5.80
940 941 0.814010 CGCTCGGATTTTGGTAGGGG 60.814 60.000 0.00 0.00 0.00 4.79
941 942 1.436983 GCGCTCGGATTTTGGTAGGG 61.437 60.000 0.00 0.00 0.00 3.53
942 943 1.436983 GGCGCTCGGATTTTGGTAGG 61.437 60.000 7.64 0.00 0.00 3.18
944 945 1.812093 CGGCGCTCGGATTTTGGTA 60.812 57.895 7.64 0.00 34.75 3.25
945 946 3.124921 CGGCGCTCGGATTTTGGT 61.125 61.111 7.64 0.00 34.75 3.67
946 947 2.817834 TCGGCGCTCGGATTTTGG 60.818 61.111 7.64 0.00 39.77 3.28
947 948 2.399611 GTCGGCGCTCGGATTTTG 59.600 61.111 7.64 0.00 39.77 2.44
948 949 3.186047 CGTCGGCGCTCGGATTTT 61.186 61.111 7.64 0.00 39.77 1.82
977 980 0.104855 CGCTCCCGAAGAATCCATCA 59.895 55.000 0.00 0.00 36.29 3.07
981 984 1.068250 CTCCGCTCCCGAAGAATCC 59.932 63.158 0.00 0.00 36.29 3.01
992 995 1.791103 CTCCGTCTCCATCTCCGCTC 61.791 65.000 0.00 0.00 0.00 5.03
1013 1028 1.000486 TTCCTGGACTCCCTCTCCG 60.000 63.158 0.00 0.00 0.00 4.63
1032 1047 3.617735 GCCGCTACCCTAGGCCTC 61.618 72.222 9.68 0.00 44.80 4.70
1064 1079 4.785453 CCGCCACCAGAGAAGGGC 62.785 72.222 0.00 0.00 42.98 5.19
1092 1107 3.412408 GCCAGAGAAGGGTCCCCC 61.412 72.222 3.51 0.00 45.90 5.40
1093 1108 3.787001 CGCCAGAGAAGGGTCCCC 61.787 72.222 3.51 0.00 0.00 4.81
1094 1109 3.787001 CCGCCAGAGAAGGGTCCC 61.787 72.222 0.00 0.00 0.00 4.46
1095 1110 4.475135 GCCGCCAGAGAAGGGTCC 62.475 72.222 0.00 0.00 0.00 4.46
1096 1111 4.821589 CGCCGCCAGAGAAGGGTC 62.822 72.222 0.00 0.00 0.00 4.46
1686 1721 4.056740 CAAGCAATTGTGTGGCAATAACA 58.943 39.130 7.40 0.00 46.29 2.41
1687 1722 4.057432 ACAAGCAATTGTGTGGCAATAAC 58.943 39.130 7.40 0.00 46.29 1.89
1689 1724 4.056740 CAACAAGCAATTGTGTGGCAATA 58.943 39.130 7.40 0.00 46.29 1.90
1707 1801 3.884091 ACAAATACAGGTAAACCGCAACA 59.116 39.130 0.00 0.00 42.08 3.33
2774 2895 8.928270 ACCGTAAATTCTCTGAGTTGTATTAG 57.072 34.615 4.32 0.00 0.00 1.73
2787 2908 6.037423 CAGAAGTGCATACCGTAAATTCTC 57.963 41.667 0.00 0.00 0.00 2.87
3405 3546 1.915141 ACTGCCCTTCAATGACTTGG 58.085 50.000 0.00 0.00 32.95 3.61
3503 3644 3.664107 TCAACTGGCAACTCATCACTAC 58.336 45.455 0.00 0.00 37.61 2.73
3696 5926 3.173953 TCCATCCAGCACTTCCATTTT 57.826 42.857 0.00 0.00 0.00 1.82
3752 5982 8.285891 TCTATCTCTCTCTTGGTCTTATTCCTT 58.714 37.037 0.00 0.00 0.00 3.36
3779 6042 4.787135 TTGGCATCTCTCTCTCTCTCTA 57.213 45.455 0.00 0.00 0.00 2.43
3863 6130 4.067192 AGTTGGTACACCGTCAAAATACC 58.933 43.478 0.00 0.00 39.29 2.73
3874 6141 3.869246 CACCGATCATTAGTTGGTACACC 59.131 47.826 0.00 0.00 39.29 4.16
4115 6462 3.074412 CCCGTGCTGTGTTCTTATCTTT 58.926 45.455 0.00 0.00 0.00 2.52
4133 6480 1.065418 ACAAGTAATCCTCCTTGCCCG 60.065 52.381 0.00 0.00 41.36 6.13
4221 6591 3.442625 CACCATCTGACAGCAACATGATT 59.557 43.478 0.00 0.00 0.00 2.57
4283 6653 4.202040 TGTTTTGAGCTCCACAGAACAATG 60.202 41.667 12.15 0.00 38.65 2.82
4510 6881 2.215196 GGCACGAAAGTTGTGGTTCTA 58.785 47.619 0.00 0.00 46.40 2.10
4669 7040 0.604243 ACGGCCATTACTGTTTGCGA 60.604 50.000 2.24 0.00 0.00 5.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.