Multiple sequence alignment - TraesCS3A01G507600

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G507600 chr3A 100.000 4327 0 0 1 4327 728991322 728986996 0.000000e+00 7991.0
1 TraesCS3A01G507600 chr3A 99.306 144 1 0 3874 4017 728987307 728987164 1.190000e-65 261.0
2 TraesCS3A01G507600 chr3A 99.306 144 1 0 4016 4159 728987449 728987306 1.190000e-65 261.0
3 TraesCS3A01G507600 chr3A 96.774 31 1 0 2282 2312 176157238 176157268 8.000000e-03 52.8
4 TraesCS3A01G507600 chr3D 85.730 883 82 22 950 1818 598884941 598884089 0.000000e+00 893.0
5 TraesCS3A01G507600 chr3D 85.950 605 52 12 996 1592 598869092 598868513 2.210000e-172 616.0
6 TraesCS3A01G507600 chr3D 87.200 500 33 10 1 470 598886741 598886243 1.370000e-149 540.0
7 TraesCS3A01G507600 chr3D 90.418 407 33 5 3159 3561 598882998 598882594 8.240000e-147 531.0
8 TraesCS3A01G507600 chr3D 74.749 598 94 41 2342 2911 598883749 598883181 9.420000e-52 215.0
9 TraesCS3A01G507600 chr3D 96.748 123 4 0 4205 4327 19544301 19544423 5.670000e-49 206.0
10 TraesCS3A01G507600 chr3D 83.010 206 26 5 472 671 598886196 598885994 1.240000e-40 178.0
11 TraesCS3A01G507600 chr3D 89.796 49 3 2 3871 3919 598882262 598882216 1.300000e-05 62.1
12 TraesCS3A01G507600 chr3D 90.909 44 3 1 4018 4061 598882258 598882216 1.680000e-04 58.4
13 TraesCS3A01G507600 chr3B 86.294 715 58 19 996 1702 806081797 806081115 0.000000e+00 741.0
14 TraesCS3A01G507600 chr3B 88.661 635 29 22 2244 2876 805685537 805684944 0.000000e+00 734.0
15 TraesCS3A01G507600 chr3B 86.888 633 54 15 2876 3489 805684785 805684163 0.000000e+00 682.0
16 TraesCS3A01G507600 chr3B 87.736 530 36 14 3333 3838 806066510 806065986 3.730000e-165 592.0
17 TraesCS3A01G507600 chr3B 84.925 597 37 16 1905 2488 806075160 806074604 4.890000e-154 555.0
18 TraesCS3A01G507600 chr3B 88.043 460 35 12 14 470 806083525 806083083 1.070000e-145 527.0
19 TraesCS3A01G507600 chr3B 84.588 558 50 19 2893 3434 806067565 806067028 4.960000e-144 521.0
20 TraesCS3A01G507600 chr3B 85.545 505 40 15 1057 1547 729466189 729466674 8.360000e-137 497.0
21 TraesCS3A01G507600 chr3B 84.739 498 44 14 1063 1547 194886116 194885638 1.820000e-128 470.0
22 TraesCS3A01G507600 chr3B 85.678 398 27 5 3159 3554 806079843 806079474 4.060000e-105 392.0
23 TraesCS3A01G507600 chr3B 83.019 371 39 13 3159 3526 805980593 805980244 9.030000e-82 315.0
24 TraesCS3A01G507600 chr3B 88.372 215 13 2 3359 3561 806054953 806054739 9.290000e-62 248.0
25 TraesCS3A01G507600 chr3B 79.096 354 56 10 2336 2681 805981399 805981056 1.210000e-55 228.0
26 TraesCS3A01G507600 chr3B 79.272 357 50 16 2333 2682 806080650 806080311 1.210000e-55 228.0
27 TraesCS3A01G507600 chr3B 87.368 190 23 1 2008 2197 805685725 805685537 2.620000e-52 217.0
28 TraesCS3A01G507600 chr3B 88.827 179 12 6 4014 4185 806065917 806065740 3.390000e-51 213.0
29 TraesCS3A01G507600 chr3B 96.610 118 4 0 4210 4327 477627216 477627333 3.410000e-46 196.0
30 TraesCS3A01G507600 chr3B 91.429 140 11 1 1718 1857 806075300 806075162 1.590000e-44 191.0
31 TraesCS3A01G507600 chr3B 94.872 117 6 0 4211 4327 743141355 743141239 2.660000e-42 183.0
32 TraesCS3A01G507600 chr3B 87.500 160 16 2 4031 4186 806038100 806037941 9.560000e-42 182.0
33 TraesCS3A01G507600 chr3B 87.838 148 11 5 3876 4017 806065912 806065766 2.680000e-37 167.0
34 TraesCS3A01G507600 chr3B 87.218 133 13 2 3889 4017 806038100 806037968 9.690000e-32 148.0
35 TraesCS3A01G507600 chr5B 84.018 657 64 21 1054 1699 110037488 110036862 1.040000e-165 593.0
36 TraesCS3A01G507600 chr5B 95.000 40 2 0 2270 2309 75218472 75218433 3.610000e-06 63.9
37 TraesCS3A01G507600 chr5B 85.714 56 8 0 4085 4140 556160627 556160682 4.670000e-05 60.2
38 TraesCS3A01G507600 chr2B 86.071 560 43 17 1054 1599 471716831 471716293 1.750000e-158 569.0
39 TraesCS3A01G507600 chr2B 95.890 146 6 0 4182 4327 81322268 81322123 2.010000e-58 237.0
40 TraesCS3A01G507600 chr2B 93.023 43 3 0 2270 2312 405272936 405272978 3.610000e-06 63.9
41 TraesCS3A01G507600 chr4A 85.178 506 40 17 1057 1547 689059549 689059064 1.810000e-133 486.0
42 TraesCS3A01G507600 chr1B 85.060 502 45 13 1057 1547 605794239 605793757 6.510000e-133 484.0
43 TraesCS3A01G507600 chr1B 97.143 35 0 1 4084 4118 344327998 344328031 1.680000e-04 58.4
44 TraesCS3A01G507600 chr2D 95.935 123 5 0 4205 4327 393213920 393214042 2.640000e-47 200.0
45 TraesCS3A01G507600 chr2D 94.309 123 7 0 4205 4327 607963351 607963229 5.710000e-44 189.0
46 TraesCS3A01G507600 chr7D 95.763 118 5 0 4210 4327 36664235 36664352 1.590000e-44 191.0
47 TraesCS3A01G507600 chr7D 95.690 116 5 0 4212 4327 478336229 478336344 2.050000e-43 187.0
48 TraesCS3A01G507600 chr7D 93.388 121 8 0 4205 4325 30289051 30288931 3.440000e-41 180.0
49 TraesCS3A01G507600 chr5A 89.655 58 5 1 2270 2326 688050670 688050727 6.000000e-09 73.1
50 TraesCS3A01G507600 chr5A 95.000 40 2 0 2270 2309 482123049 482123010 3.610000e-06 63.9
51 TraesCS3A01G507600 chr6B 91.667 48 1 2 2276 2320 662506757 662506710 3.610000e-06 63.9
52 TraesCS3A01G507600 chr7B 97.143 35 1 0 2278 2312 622253320 622253286 4.670000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G507600 chr3A 728986996 728991322 4326 True 7991.000000 7991 100.000000 1 4327 1 chr3A.!!$R1 4326
1 TraesCS3A01G507600 chr3D 598868513 598869092 579 True 616.000000 616 85.950000 996 1592 1 chr3D.!!$R1 596
2 TraesCS3A01G507600 chr3D 598882216 598886741 4525 True 353.928571 893 85.973143 1 4061 7 chr3D.!!$R2 4060
3 TraesCS3A01G507600 chr3B 805684163 805685725 1562 True 544.333333 734 87.639000 2008 3489 3 chr3B.!!$R4 1481
4 TraesCS3A01G507600 chr3B 806079474 806083525 4051 True 472.000000 741 84.821750 14 3554 4 chr3B.!!$R9 3540
5 TraesCS3A01G507600 chr3B 806065740 806067565 1825 True 373.250000 592 87.247250 2893 4185 4 chr3B.!!$R7 1292
6 TraesCS3A01G507600 chr3B 806074604 806075300 696 True 373.000000 555 88.177000 1718 2488 2 chr3B.!!$R8 770
7 TraesCS3A01G507600 chr3B 805980244 805981399 1155 True 271.500000 315 81.057500 2336 3526 2 chr3B.!!$R5 1190
8 TraesCS3A01G507600 chr5B 110036862 110037488 626 True 593.000000 593 84.018000 1054 1699 1 chr5B.!!$R2 645
9 TraesCS3A01G507600 chr2B 471716293 471716831 538 True 569.000000 569 86.071000 1054 1599 1 chr2B.!!$R2 545

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
717 1185 0.037326 CTCGTGGCAAGCTGGAGTAA 60.037 55.0 0.00 0.0 0.00 2.24 F
1164 2098 0.319555 CCTGATCCGTGTGTGTCGTT 60.320 55.0 0.00 0.0 0.00 3.85 F
1452 2391 0.514691 CTTCTCTGCGCCAGTTGTTC 59.485 55.0 4.18 0.0 32.61 3.18 F
2646 3680 0.399833 TGCAGATACCCACACTTGCA 59.600 50.0 0.00 0.0 0.00 4.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1769 2743 0.537188 ATGGGTTCCTACTCACGCTG 59.463 55.000 0.00 0.00 37.65 5.18 R
1972 2964 1.068588 GTGGTGCGTGATAGCCTATCA 59.931 52.381 10.37 10.37 42.56 2.15 R
3311 4632 0.109272 CTGACTAGAAAGACGCCGCA 60.109 55.000 0.00 0.00 0.00 5.69 R
4243 6410 0.025128 GAAAAAGCGGATCGAGCGTC 59.975 55.000 0.00 0.00 40.04 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 68 1.276622 AAAGTCTACCCGCTGGACAT 58.723 50.000 0.00 0.00 32.72 3.06
116 120 2.281761 CTGCCCAGCGTGGAGTTT 60.282 61.111 5.71 0.00 40.96 2.66
179 183 1.358152 TGAACCCCGATGACTTCCTT 58.642 50.000 0.00 0.00 0.00 3.36
185 189 2.290323 CCCCGATGACTTCCTTGACTTT 60.290 50.000 0.00 0.00 0.00 2.66
191 195 5.290643 CGATGACTTCCTTGACTTTGATCTC 59.709 44.000 0.00 0.00 0.00 2.75
242 246 1.376037 GAGGTCCCCGTTGAAGCTG 60.376 63.158 0.00 0.00 0.00 4.24
251 255 0.670546 CGTTGAAGCTGTGGGACGAT 60.671 55.000 0.00 0.00 32.73 3.73
252 256 0.798776 GTTGAAGCTGTGGGACGATG 59.201 55.000 0.00 0.00 0.00 3.84
253 257 0.684535 TTGAAGCTGTGGGACGATGA 59.315 50.000 0.00 0.00 0.00 2.92
254 258 0.904649 TGAAGCTGTGGGACGATGAT 59.095 50.000 0.00 0.00 0.00 2.45
335 342 0.108615 CACGAGAGCTTGGAATCCGT 60.109 55.000 0.00 0.00 0.00 4.69
343 350 3.081804 AGCTTGGAATCCGTTTGGTTAG 58.918 45.455 0.00 0.00 36.30 2.34
369 376 1.269206 CGCTTTGCCATGAGTGTTGTT 60.269 47.619 0.00 0.00 0.00 2.83
370 377 2.397549 GCTTTGCCATGAGTGTTGTTC 58.602 47.619 0.00 0.00 0.00 3.18
371 378 2.863704 GCTTTGCCATGAGTGTTGTTCC 60.864 50.000 0.00 0.00 0.00 3.62
372 379 1.327303 TTGCCATGAGTGTTGTTCCC 58.673 50.000 0.00 0.00 0.00 3.97
373 380 0.184692 TGCCATGAGTGTTGTTCCCA 59.815 50.000 0.00 0.00 0.00 4.37
374 381 1.203038 TGCCATGAGTGTTGTTCCCAT 60.203 47.619 0.00 0.00 0.00 4.00
375 382 1.203052 GCCATGAGTGTTGTTCCCATG 59.797 52.381 0.00 0.00 35.61 3.66
378 385 4.272489 CCATGAGTGTTGTTCCCATGTAT 58.728 43.478 0.00 0.00 34.43 2.29
428 459 5.703592 TCAGGTGCTATTTATTCGTTGTTGT 59.296 36.000 0.00 0.00 0.00 3.32
453 484 1.566018 CTCTTGGTTCCGGTTGTCGC 61.566 60.000 0.00 0.00 37.59 5.19
496 572 1.270839 TGAGGTTGTAACTCTGCAGCC 60.271 52.381 9.47 1.24 38.57 4.85
517 593 1.152694 AAGGCCTGTCAAGCAAGCA 60.153 52.632 5.69 0.00 36.29 3.91
518 594 0.756442 AAGGCCTGTCAAGCAAGCAA 60.756 50.000 5.69 0.00 36.29 3.91
520 596 1.372623 GCCTGTCAAGCAAGCAAGC 60.373 57.895 0.00 0.00 34.76 4.01
527 603 1.958579 TCAAGCAAGCAAGCAGTCATT 59.041 42.857 3.19 0.00 36.85 2.57
530 606 3.844577 AGCAAGCAAGCAGTCATTAAG 57.155 42.857 3.19 0.00 36.85 1.85
543 619 1.451387 ATTAAGTGAAGCCGGCGGG 60.451 57.895 29.48 9.71 0.00 6.13
564 642 3.002656 GGCAATGTCGATCATAGTTGTGG 59.997 47.826 0.00 0.00 35.48 4.17
568 646 4.649088 TGTCGATCATAGTTGTGGGTAG 57.351 45.455 0.00 0.00 0.00 3.18
569 647 3.181479 TGTCGATCATAGTTGTGGGTAGC 60.181 47.826 0.00 0.00 0.00 3.58
572 650 4.830600 TCGATCATAGTTGTGGGTAGCATA 59.169 41.667 0.00 0.00 0.00 3.14
573 651 5.480422 TCGATCATAGTTGTGGGTAGCATAT 59.520 40.000 0.00 0.00 0.00 1.78
574 652 5.578336 CGATCATAGTTGTGGGTAGCATATG 59.422 44.000 0.00 0.00 0.00 1.78
575 653 6.572314 CGATCATAGTTGTGGGTAGCATATGA 60.572 42.308 6.97 0.00 33.93 2.15
576 654 6.493189 TCATAGTTGTGGGTAGCATATGAA 57.507 37.500 6.97 0.00 0.00 2.57
577 655 6.894682 TCATAGTTGTGGGTAGCATATGAAA 58.105 36.000 6.97 0.00 0.00 2.69
578 656 7.517320 TCATAGTTGTGGGTAGCATATGAAAT 58.483 34.615 6.97 0.00 0.00 2.17
582 660 3.314913 TGTGGGTAGCATATGAAATTGCG 59.685 43.478 6.97 0.00 43.61 4.85
587 665 5.008613 GGGTAGCATATGAAATTGCGAAAGA 59.991 40.000 6.97 0.00 43.61 2.52
616 694 7.330208 TGATGTTATCTATGAACGCATCATCAG 59.670 37.037 7.50 5.26 45.91 2.90
627 705 1.400846 GCATCATCAGTCTGTTGCTGG 59.599 52.381 13.83 5.07 38.33 4.85
647 727 6.489700 TGCTGGTCAGAGATATTTTGTTTTCA 59.510 34.615 1.65 0.00 0.00 2.69
671 751 2.594592 ACCGTTGCTGAACCTGCC 60.595 61.111 0.00 0.00 0.00 4.85
672 752 2.594303 CCGTTGCTGAACCTGCCA 60.594 61.111 0.00 0.00 0.00 4.92
676 756 1.666888 CGTTGCTGAACCTGCCATTTC 60.667 52.381 0.00 0.00 0.00 2.17
677 757 1.340889 GTTGCTGAACCTGCCATTTCA 59.659 47.619 0.00 0.00 0.00 2.69
678 758 1.927487 TGCTGAACCTGCCATTTCAT 58.073 45.000 0.00 0.00 31.41 2.57
679 759 1.546923 TGCTGAACCTGCCATTTCATG 59.453 47.619 0.00 0.00 31.41 3.07
681 761 2.231964 GCTGAACCTGCCATTTCATGAA 59.768 45.455 3.38 3.38 31.41 2.57
682 762 3.675228 GCTGAACCTGCCATTTCATGAAG 60.675 47.826 8.41 0.00 31.41 3.02
683 763 2.827322 TGAACCTGCCATTTCATGAAGG 59.173 45.455 8.41 8.72 38.86 3.46
684 764 2.905415 ACCTGCCATTTCATGAAGGA 57.095 45.000 16.00 3.01 37.36 3.36
685 765 2.450476 ACCTGCCATTTCATGAAGGAC 58.550 47.619 16.00 8.80 37.36 3.85
686 766 1.753073 CCTGCCATTTCATGAAGGACC 59.247 52.381 16.00 4.99 36.56 4.46
687 767 2.622452 CCTGCCATTTCATGAAGGACCT 60.622 50.000 16.00 0.00 36.56 3.85
688 768 2.426024 CTGCCATTTCATGAAGGACCTG 59.574 50.000 16.00 7.27 0.00 4.00
689 769 1.753073 GCCATTTCATGAAGGACCTGG 59.247 52.381 16.00 14.87 0.00 4.45
690 770 2.885554 GCCATTTCATGAAGGACCTGGT 60.886 50.000 16.00 0.00 0.00 4.00
691 771 2.756760 CCATTTCATGAAGGACCTGGTG 59.243 50.000 2.82 0.00 0.00 4.17
692 772 3.424703 CATTTCATGAAGGACCTGGTGT 58.575 45.455 2.82 0.00 0.00 4.16
704 1172 1.230635 CCTGGTGTGCTTTCTCGTGG 61.231 60.000 0.00 0.00 0.00 4.94
710 1178 1.227943 TGCTTTCTCGTGGCAAGCT 60.228 52.632 17.50 0.00 42.91 3.74
711 1179 1.208614 GCTTTCTCGTGGCAAGCTG 59.791 57.895 12.37 0.00 39.92 4.24
717 1185 0.037326 CTCGTGGCAAGCTGGAGTAA 60.037 55.000 0.00 0.00 0.00 2.24
721 1189 1.276421 GTGGCAAGCTGGAGTAAGAGA 59.724 52.381 0.00 0.00 0.00 3.10
723 1191 2.573462 TGGCAAGCTGGAGTAAGAGAAT 59.427 45.455 0.00 0.00 0.00 2.40
724 1192 2.941720 GGCAAGCTGGAGTAAGAGAATG 59.058 50.000 0.00 0.00 0.00 2.67
725 1193 2.354199 GCAAGCTGGAGTAAGAGAATGC 59.646 50.000 0.00 0.00 0.00 3.56
731 1593 2.166459 TGGAGTAAGAGAATGCGTGAGG 59.834 50.000 0.00 0.00 0.00 3.86
762 1627 7.538678 CCTGAACTGCAAAATGTGTCTTTATAC 59.461 37.037 0.00 0.00 0.00 1.47
763 1628 7.935520 TGAACTGCAAAATGTGTCTTTATACA 58.064 30.769 0.00 0.00 0.00 2.29
765 1630 9.243637 GAACTGCAAAATGTGTCTTTATACAAA 57.756 29.630 0.00 0.00 29.85 2.83
766 1631 9.762933 AACTGCAAAATGTGTCTTTATACAAAT 57.237 25.926 0.00 0.00 29.85 2.32
767 1632 9.762933 ACTGCAAAATGTGTCTTTATACAAATT 57.237 25.926 0.00 0.00 38.65 1.82
799 1671 7.923344 TCTTTCCAAAATGCATTTACTTTCGAA 59.077 29.630 24.35 15.28 0.00 3.71
850 1722 6.759497 ATATTTTCTTTCTTGGACGGAAGG 57.241 37.500 0.00 0.00 0.00 3.46
851 1723 3.849563 TTTCTTTCTTGGACGGAAGGA 57.150 42.857 0.00 0.00 0.00 3.36
852 1724 3.849563 TTCTTTCTTGGACGGAAGGAA 57.150 42.857 0.00 0.00 36.77 3.36
1094 2020 1.528129 CTCCCCTTCAAAGTGTGAGC 58.472 55.000 0.00 0.00 37.61 4.26
1106 2032 1.229625 TGTGAGCACAGATCCCCCT 60.230 57.895 0.00 0.00 36.21 4.79
1114 2048 1.319799 CAGATCCCCCTCTTCCCCT 59.680 63.158 0.00 0.00 0.00 4.79
1146 2080 1.448922 CTCGGACCAGATCTCGTCCC 61.449 65.000 27.65 14.02 44.88 4.46
1164 2098 0.319555 CCTGATCCGTGTGTGTCGTT 60.320 55.000 0.00 0.00 0.00 3.85
1173 2107 1.885850 GTGTGTCGTTCGGTGGCTT 60.886 57.895 0.00 0.00 0.00 4.35
1372 2308 4.629200 GCTCTGATGCGATTTAGATTAGGG 59.371 45.833 0.00 0.00 0.00 3.53
1376 2312 2.846193 TGCGATTTAGATTAGGGGTGC 58.154 47.619 0.00 0.00 0.00 5.01
1377 2313 1.798813 GCGATTTAGATTAGGGGTGCG 59.201 52.381 0.00 0.00 0.00 5.34
1385 2321 1.956629 ATTAGGGGTGCGTCACGAGG 61.957 60.000 0.00 0.00 34.83 4.63
1407 2346 3.630312 GGCCTATCAGGTTGCGATTTTAA 59.370 43.478 0.00 0.00 37.80 1.52
1429 2368 2.969950 CGGGGAAGTGGTAGATAATCCA 59.030 50.000 0.00 0.00 0.00 3.41
1441 2380 4.018484 AGATAATCCATGGCTTCTCTGC 57.982 45.455 13.68 0.00 0.00 4.26
1442 2381 2.245159 TAATCCATGGCTTCTCTGCG 57.755 50.000 6.96 0.00 0.00 5.18
1443 2382 1.099879 AATCCATGGCTTCTCTGCGC 61.100 55.000 6.96 0.00 0.00 6.09
1444 2383 2.955022 ATCCATGGCTTCTCTGCGCC 62.955 60.000 6.96 0.00 46.46 6.53
1448 2387 2.359230 GGCTTCTCTGCGCCAGTT 60.359 61.111 4.18 0.00 45.59 3.16
1449 2388 2.684843 GGCTTCTCTGCGCCAGTTG 61.685 63.158 4.18 0.00 45.59 3.16
1450 2389 1.963338 GCTTCTCTGCGCCAGTTGT 60.963 57.895 4.18 0.00 32.61 3.32
1451 2390 1.510480 GCTTCTCTGCGCCAGTTGTT 61.510 55.000 4.18 0.00 32.61 2.83
1452 2391 0.514691 CTTCTCTGCGCCAGTTGTTC 59.485 55.000 4.18 0.00 32.61 3.18
1453 2392 0.884704 TTCTCTGCGCCAGTTGTTCC 60.885 55.000 4.18 0.00 32.61 3.62
1454 2393 1.597854 CTCTGCGCCAGTTGTTCCA 60.598 57.895 4.18 0.00 32.61 3.53
1500 2464 9.942850 ATGTTGGAATGATTGATGATATACGTA 57.057 29.630 0.00 0.00 0.00 3.57
1514 2479 9.776158 GATGATATACGTATTCTGTAGGTTCAG 57.224 37.037 14.33 0.00 36.85 3.02
1533 2499 3.459227 TCAGATATGCCTGTGAATTGGGA 59.541 43.478 0.00 0.00 35.71 4.37
1564 2531 5.116180 AGAGTTCACTTTGAATTGTCGACA 58.884 37.500 15.76 15.76 38.79 4.35
1565 2532 5.760253 AGAGTTCACTTTGAATTGTCGACAT 59.240 36.000 20.80 4.97 38.79 3.06
1567 2534 6.888430 AGTTCACTTTGAATTGTCGACATAC 58.112 36.000 20.80 13.75 38.79 2.39
1569 2536 6.466308 TCACTTTGAATTGTCGACATACAG 57.534 37.500 20.80 11.79 0.00 2.74
1572 2539 5.408604 ACTTTGAATTGTCGACATACAGGAC 59.591 40.000 20.80 7.61 0.00 3.85
1611 2578 2.167662 GTATGTTTGTGGGAACAGGGG 58.832 52.381 0.00 0.00 44.46 4.79
1699 2666 1.551883 GGCAAGCCAATTGGTGATTCT 59.448 47.619 25.19 10.80 39.47 2.40
1702 2669 4.141869 GGCAAGCCAATTGGTGATTCTATT 60.142 41.667 25.19 5.63 39.47 1.73
1703 2670 5.045872 GCAAGCCAATTGGTGATTCTATTC 58.954 41.667 25.19 4.91 39.47 1.75
1704 2671 5.163478 GCAAGCCAATTGGTGATTCTATTCT 60.163 40.000 25.19 7.18 39.47 2.40
1705 2672 6.039717 GCAAGCCAATTGGTGATTCTATTCTA 59.960 38.462 25.19 0.00 39.47 2.10
1706 2673 7.646314 CAAGCCAATTGGTGATTCTATTCTAG 58.354 38.462 25.19 1.57 37.57 2.43
1707 2674 5.767168 AGCCAATTGGTGATTCTATTCTAGC 59.233 40.000 25.19 5.31 37.57 3.42
1708 2675 5.334414 GCCAATTGGTGATTCTATTCTAGCG 60.334 44.000 25.19 0.00 37.57 4.26
1709 2676 5.991606 CCAATTGGTGATTCTATTCTAGCGA 59.008 40.000 16.90 0.00 0.00 4.93
1710 2677 6.146837 CCAATTGGTGATTCTATTCTAGCGAG 59.853 42.308 16.90 0.00 0.00 5.03
1711 2678 5.854010 TTGGTGATTCTATTCTAGCGAGT 57.146 39.130 0.00 0.00 0.00 4.18
1712 2679 5.188327 TGGTGATTCTATTCTAGCGAGTG 57.812 43.478 0.00 0.00 0.00 3.51
1713 2680 4.887655 TGGTGATTCTATTCTAGCGAGTGA 59.112 41.667 0.00 0.00 0.00 3.41
1714 2681 5.359860 TGGTGATTCTATTCTAGCGAGTGAA 59.640 40.000 0.00 0.00 0.00 3.18
1715 2682 6.040955 TGGTGATTCTATTCTAGCGAGTGAAT 59.959 38.462 0.00 1.21 36.87 2.57
1716 2683 6.926272 GGTGATTCTATTCTAGCGAGTGAATT 59.074 38.462 0.00 0.00 35.01 2.17
1723 2690 5.702622 TTCTAGCGAGTGAATTTGATTCG 57.297 39.130 0.00 0.00 42.15 3.34
1769 2743 3.309954 GCACCGTTTTCTGAGATATGGAC 59.690 47.826 9.52 0.24 0.00 4.02
1774 2748 4.184629 GTTTTCTGAGATATGGACAGCGT 58.815 43.478 0.00 0.00 0.00 5.07
1818 2792 1.698506 TTTTGCTTTCCGGGACATGT 58.301 45.000 0.00 0.00 0.00 3.21
1822 2796 2.156098 TGCTTTCCGGGACATGTTTAC 58.844 47.619 0.00 0.00 0.00 2.01
1857 2831 0.818040 GGTTGGCACTTCGTGACCTT 60.818 55.000 0.00 0.00 41.60 3.50
1858 2832 1.541670 GGTTGGCACTTCGTGACCTTA 60.542 52.381 0.00 0.00 41.60 2.69
1860 2840 2.614983 GTTGGCACTTCGTGACCTTAAA 59.385 45.455 0.00 0.00 41.60 1.52
1868 2848 5.121768 CACTTCGTGACCTTAAACCTTATGG 59.878 44.000 0.00 0.00 35.23 2.74
1873 2853 4.887655 GTGACCTTAAACCTTATGGGATGG 59.112 45.833 0.00 0.00 38.76 3.51
1876 2856 4.134563 CCTTAAACCTTATGGGATGGTCG 58.865 47.826 0.00 0.00 34.49 4.79
1878 2858 1.591768 AACCTTATGGGATGGTCGGT 58.408 50.000 0.00 0.00 34.49 4.69
1887 2867 1.210967 GGGATGGTCGGTGGTGATTTA 59.789 52.381 0.00 0.00 0.00 1.40
1888 2868 2.285977 GGATGGTCGGTGGTGATTTAC 58.714 52.381 0.00 0.00 0.00 2.01
1889 2869 2.093128 GGATGGTCGGTGGTGATTTACT 60.093 50.000 0.00 0.00 0.00 2.24
1890 2870 2.465860 TGGTCGGTGGTGATTTACTG 57.534 50.000 0.00 0.00 0.00 2.74
1891 2871 1.972075 TGGTCGGTGGTGATTTACTGA 59.028 47.619 0.00 0.00 0.00 3.41
1892 2872 2.569853 TGGTCGGTGGTGATTTACTGAT 59.430 45.455 0.00 0.00 34.93 2.90
1895 2875 4.142687 GGTCGGTGGTGATTTACTGATTTG 60.143 45.833 0.00 0.00 34.93 2.32
1896 2876 4.454504 GTCGGTGGTGATTTACTGATTTGT 59.545 41.667 0.00 0.00 34.93 2.83
1897 2877 4.454161 TCGGTGGTGATTTACTGATTTGTG 59.546 41.667 0.00 0.00 0.00 3.33
1898 2878 4.485163 GGTGGTGATTTACTGATTTGTGC 58.515 43.478 0.00 0.00 0.00 4.57
1899 2879 4.218417 GGTGGTGATTTACTGATTTGTGCT 59.782 41.667 0.00 0.00 0.00 4.40
1900 2880 5.414454 GGTGGTGATTTACTGATTTGTGCTA 59.586 40.000 0.00 0.00 0.00 3.49
1901 2881 6.403636 GGTGGTGATTTACTGATTTGTGCTAG 60.404 42.308 0.00 0.00 0.00 3.42
1902 2882 6.149474 GTGGTGATTTACTGATTTGTGCTAGT 59.851 38.462 0.00 0.00 0.00 2.57
1903 2883 6.714810 TGGTGATTTACTGATTTGTGCTAGTT 59.285 34.615 0.00 0.00 0.00 2.24
1904 2884 7.023575 GGTGATTTACTGATTTGTGCTAGTTG 58.976 38.462 0.00 0.00 0.00 3.16
1905 2885 7.094805 GGTGATTTACTGATTTGTGCTAGTTGA 60.095 37.037 0.00 0.00 0.00 3.18
1906 2886 8.454106 GTGATTTACTGATTTGTGCTAGTTGAT 58.546 33.333 0.00 0.00 0.00 2.57
1907 2887 8.668353 TGATTTACTGATTTGTGCTAGTTGATC 58.332 33.333 0.00 0.00 0.00 2.92
1918 2898 3.938963 TGCTAGTTGATCGTTTTCCATCC 59.061 43.478 0.00 0.00 0.00 3.51
1972 2964 4.072839 AGCGCTTGATGAATGATGATGAT 58.927 39.130 2.64 0.00 0.00 2.45
1986 2978 5.899299 TGATGATGATGATAGGCTATCACG 58.101 41.667 33.28 0.00 46.94 4.35
1987 2979 4.115401 TGATGATGATAGGCTATCACGC 57.885 45.455 33.28 27.28 46.94 5.34
2004 2996 3.058570 TCACGCACCACATTTTGTATGAC 60.059 43.478 0.00 0.00 0.00 3.06
2012 3004 5.879777 ACCACATTTTGTATGACGATGATGA 59.120 36.000 0.00 0.00 0.00 2.92
2035 3027 4.323417 TGATGTGGTGAAGTGGTGATTAC 58.677 43.478 0.00 0.00 0.00 1.89
2044 3036 2.985896 AGTGGTGATTACGAATGTGGG 58.014 47.619 0.00 0.00 0.00 4.61
2046 3038 3.008594 AGTGGTGATTACGAATGTGGGAA 59.991 43.478 0.00 0.00 0.00 3.97
2060 3052 1.002502 GGGAAAACAGTCCTCGGGG 60.003 63.158 0.00 0.00 37.85 5.73
2076 3068 0.469144 GGGGTTTTCCTGTCTTGGCA 60.469 55.000 0.00 0.00 40.46 4.92
2077 3069 0.961753 GGGTTTTCCTGTCTTGGCAG 59.038 55.000 0.00 0.00 40.46 4.85
2171 3188 2.236395 CAAGGATGTACTCCCTCCGTTT 59.764 50.000 7.01 0.00 46.27 3.60
2184 3201 2.163613 CCTCCGTTTGGAAATAAGTGGC 59.836 50.000 0.00 0.00 45.87 5.01
2190 3207 2.279935 TGGAAATAAGTGGCGTGGTT 57.720 45.000 0.00 0.00 0.00 3.67
2194 3211 4.767928 TGGAAATAAGTGGCGTGGTTTTAT 59.232 37.500 0.00 0.00 0.00 1.40
2196 3213 6.160684 GGAAATAAGTGGCGTGGTTTTATTT 58.839 36.000 0.00 0.00 36.91 1.40
2197 3214 6.309494 GGAAATAAGTGGCGTGGTTTTATTTC 59.691 38.462 14.81 14.81 43.35 2.17
2198 3215 5.968528 ATAAGTGGCGTGGTTTTATTTCA 57.031 34.783 0.00 0.00 0.00 2.69
2199 3216 4.657436 AAGTGGCGTGGTTTTATTTCAA 57.343 36.364 0.00 0.00 0.00 2.69
2200 3217 4.864704 AGTGGCGTGGTTTTATTTCAAT 57.135 36.364 0.00 0.00 0.00 2.57
2201 3218 5.208463 AGTGGCGTGGTTTTATTTCAATT 57.792 34.783 0.00 0.00 0.00 2.32
2202 3219 5.606505 AGTGGCGTGGTTTTATTTCAATTT 58.393 33.333 0.00 0.00 0.00 1.82
2205 3222 6.630840 GTGGCGTGGTTTTATTTCAATTTTTG 59.369 34.615 0.00 0.00 0.00 2.44
2227 3244 6.509418 TGAACTAAAACCATGCCACTTATC 57.491 37.500 0.00 0.00 0.00 1.75
2236 3253 3.252701 CCATGCCACTTATCTCTGAATGC 59.747 47.826 0.00 0.00 0.00 3.56
2280 3297 3.119531 TGTTTGTTTGCACTCCTTCTGTG 60.120 43.478 0.00 0.00 38.36 3.66
2295 3312 6.353323 TCCTTCTGTGAACAAATGTAAGACA 58.647 36.000 0.00 0.00 0.00 3.41
2425 3450 8.150945 ACATAGTAATAGTAGCATGGTCCTTTG 58.849 37.037 0.00 0.00 0.00 2.77
2428 3453 7.220030 AGTAATAGTAGCATGGTCCTTTGATG 58.780 38.462 0.00 0.00 0.00 3.07
2429 3454 3.287867 AGTAGCATGGTCCTTTGATGG 57.712 47.619 0.00 0.00 0.00 3.51
2446 3472 7.223387 CCTTTGATGGCTTCTTAATGCAAATAC 59.777 37.037 0.00 0.00 0.00 1.89
2489 3517 1.782201 ATGTGGCCAGCTTCAGGTCA 61.782 55.000 5.11 0.00 38.70 4.02
2503 3535 4.527509 TCAGGTCACTAGAGCAGAAAAG 57.472 45.455 0.00 0.00 44.60 2.27
2577 3611 7.818930 CACTTGAAATAATGTTGCATTTACCCT 59.181 33.333 0.00 0.00 0.00 4.34
2640 3674 4.719773 AGGTACTATTTGCAGATACCCACA 59.280 41.667 4.45 0.00 36.02 4.17
2644 3678 4.943705 ACTATTTGCAGATACCCACACTTG 59.056 41.667 0.00 0.00 0.00 3.16
2646 3680 0.399833 TGCAGATACCCACACTTGCA 59.600 50.000 0.00 0.00 0.00 4.08
2648 3682 2.094675 GCAGATACCCACACTTGCATT 58.905 47.619 0.00 0.00 0.00 3.56
2751 3852 9.039870 CATAGAAATACTTGAGTCACTGGATTC 57.960 37.037 0.00 0.00 0.00 2.52
2766 3867 5.923733 CTGGATTCAGTTGTCTACTAGGT 57.076 43.478 0.00 0.00 34.56 3.08
2768 3869 6.037786 TGGATTCAGTTGTCTACTAGGTTG 57.962 41.667 0.00 0.00 34.56 3.77
2769 3870 5.542635 TGGATTCAGTTGTCTACTAGGTTGT 59.457 40.000 0.00 0.00 34.56 3.32
2882 4156 8.443937 CACTAAAATTGTTGGCTACTAGAACTC 58.556 37.037 0.00 0.00 0.00 3.01
2907 4181 4.425180 TGAGGTAACCAGCTTTTGTGTA 57.575 40.909 0.00 0.00 30.99 2.90
3076 4387 2.570752 ACGTCTCCTGGAGTACTCACTA 59.429 50.000 23.91 9.06 34.21 2.74
3091 4402 8.012957 AGTACTCACTACCATTCTCATTTAGG 57.987 38.462 0.00 0.00 31.45 2.69
3094 4405 8.375493 ACTCACTACCATTCTCATTTAGGTTA 57.625 34.615 0.00 0.00 33.91 2.85
3113 4424 5.433381 AGGTTATTTAATCTTCTCCCAGCCT 59.567 40.000 0.00 0.00 0.00 4.58
3118 4429 1.211456 ATCTTCTCCCAGCCTCCTTG 58.789 55.000 0.00 0.00 0.00 3.61
3194 4514 4.881850 GGACACCACTTCCCTATGTAAATG 59.118 45.833 0.00 0.00 0.00 2.32
3209 4529 4.219115 TGTAAATGTGCCCCTTTTCTTCA 58.781 39.130 0.00 0.00 0.00 3.02
3210 4530 4.837860 TGTAAATGTGCCCCTTTTCTTCAT 59.162 37.500 0.00 0.00 0.00 2.57
3213 4533 1.344114 TGTGCCCCTTTTCTTCATTGC 59.656 47.619 0.00 0.00 0.00 3.56
3216 4536 0.532115 CCCCTTTTCTTCATTGCCCG 59.468 55.000 0.00 0.00 0.00 6.13
3231 4551 0.451783 GCCCGGCTGATGTAAAACTG 59.548 55.000 0.71 0.00 0.00 3.16
3238 4558 5.106317 CCGGCTGATGTAAAACTGTTGTTAT 60.106 40.000 0.00 0.00 34.96 1.89
3281 4602 4.519437 CATGGCTCGGAGCTGCGA 62.519 66.667 28.87 28.87 41.99 5.10
3311 4632 1.581954 CGACAGAGTTGGAGCGACT 59.418 57.895 0.00 0.00 0.00 4.18
3329 4653 0.109272 CTGCGGCGTCTTTCTAGTCA 60.109 55.000 9.37 0.00 0.00 3.41
3343 4667 7.274686 GTCTTTCTAGTCAGTCATTGTTAGAGC 59.725 40.741 0.00 0.00 31.08 4.09
3417 4745 7.307751 CGGTTGTATAATGGATGTAACATGGTC 60.308 40.741 0.00 0.00 0.00 4.02
3478 5433 6.938596 TGATTGACAGGATGAATATAGCTTGG 59.061 38.462 0.00 0.00 39.69 3.61
3482 5437 4.008330 CAGGATGAATATAGCTTGGCAGG 58.992 47.826 0.00 0.00 39.69 4.85
3528 5486 2.421399 GCAGCCCCTGATTTCCTGC 61.421 63.158 0.00 0.00 41.57 4.85
3543 5501 3.325293 TCCTGCTACTGCTCTTGAAAG 57.675 47.619 0.00 0.00 40.48 2.62
3547 5505 2.290514 TGCTACTGCTCTTGAAAGCCAT 60.291 45.455 0.00 0.00 41.77 4.40
3568 5526 3.025619 GCGTCTGCTTGCAGTGTT 58.974 55.556 20.20 0.00 38.39 3.32
3584 5542 4.260948 GCAGTGTTGACTTTTTGAGAGAGG 60.261 45.833 0.00 0.00 0.00 3.69
3585 5543 5.118990 CAGTGTTGACTTTTTGAGAGAGGA 58.881 41.667 0.00 0.00 0.00 3.71
3586 5544 5.586243 CAGTGTTGACTTTTTGAGAGAGGAA 59.414 40.000 0.00 0.00 0.00 3.36
3689 5812 3.121396 CCAAAAATGACATGTTTGCGTCG 60.121 43.478 21.24 7.78 34.78 5.12
3739 5864 7.813148 TCGATCTGGTTTTAGTTCTCTGTTTAG 59.187 37.037 0.00 0.00 0.00 1.85
3752 5877 4.765856 TCTCTGTTTAGTTAGAGAAGCCGT 59.234 41.667 0.00 0.00 44.63 5.68
3756 5881 5.603596 TGTTTAGTTAGAGAAGCCGTGAAA 58.396 37.500 0.00 0.00 0.00 2.69
3778 5903 4.793201 AGAAACTGTTTGCCTTCTTAGGT 58.207 39.130 11.03 0.00 44.00 3.08
3785 5910 0.250727 TGCCTTCTTAGGTGCCACAC 60.251 55.000 0.00 0.00 44.00 3.82
3846 5974 1.918595 GTAGGTACTGCGCCTTACAC 58.081 55.000 4.18 0.00 41.52 2.90
3847 5975 1.475682 GTAGGTACTGCGCCTTACACT 59.524 52.381 4.18 8.09 41.52 3.55
3851 5986 2.095919 GGTACTGCGCCTTACACTTTTG 60.096 50.000 4.18 0.00 0.00 2.44
3855 5990 3.628487 ACTGCGCCTTACACTTTTGTTTA 59.372 39.130 4.18 0.00 37.15 2.01
3858 5993 3.972502 GCGCCTTACACTTTTGTTTAGTG 59.027 43.478 0.00 0.00 46.56 2.74
3867 6002 5.519722 CACTTTTGTTTAGTGTCCATGACC 58.480 41.667 0.00 0.00 38.51 4.02
3877 6012 0.967380 GTCCATGACCAGGCCCAAAG 60.967 60.000 0.00 0.00 0.00 2.77
3878 6013 1.139498 TCCATGACCAGGCCCAAAGA 61.139 55.000 0.00 0.00 0.00 2.52
3879 6014 0.032813 CCATGACCAGGCCCAAAGAT 60.033 55.000 0.00 0.00 0.00 2.40
3880 6015 1.396653 CATGACCAGGCCCAAAGATC 58.603 55.000 0.00 0.00 0.00 2.75
3881 6016 0.107017 ATGACCAGGCCCAAAGATCG 60.107 55.000 0.00 0.00 0.00 3.69
3924 6087 1.073923 CTCCTGCCATACCAATACCCC 59.926 57.143 0.00 0.00 0.00 4.95
3929 6092 2.159382 GCCATACCAATACCCCGATTG 58.841 52.381 0.00 0.00 36.70 2.67
3954 6117 6.695292 TTTTTCCGAGAGTACGTCAATAAC 57.305 37.500 0.00 0.00 0.00 1.89
4003 6166 8.947115 AGGAAACATATTTACAAGAAGTGTAGC 58.053 33.333 0.00 0.00 43.61 3.58
4004 6167 8.726988 GGAAACATATTTACAAGAAGTGTAGCA 58.273 33.333 0.00 0.00 43.61 3.49
4005 6168 9.543018 GAAACATATTTACAAGAAGTGTAGCAC 57.457 33.333 0.00 0.00 43.61 4.40
4006 6169 8.615878 AACATATTTACAAGAAGTGTAGCACA 57.384 30.769 2.01 0.00 43.61 4.57
4007 6170 8.615878 ACATATTTACAAGAAGTGTAGCACAA 57.384 30.769 2.01 0.00 43.61 3.33
4008 6171 9.062524 ACATATTTACAAGAAGTGTAGCACAAA 57.937 29.630 2.01 0.00 43.61 2.83
4011 6174 6.935741 TTACAAGAAGTGTAGCACAAATGT 57.064 33.333 2.01 4.29 43.61 2.71
4012 6175 5.173774 ACAAGAAGTGTAGCACAAATGTG 57.826 39.130 9.17 9.17 43.23 3.21
4013 6176 4.881273 ACAAGAAGTGTAGCACAAATGTGA 59.119 37.500 17.32 0.00 43.12 3.58
4014 6177 5.356751 ACAAGAAGTGTAGCACAAATGTGAA 59.643 36.000 17.32 1.62 43.12 3.18
4015 6178 6.677920 ACAAGAAGTGTAGCACAAATGTGAAC 60.678 38.462 17.32 13.46 43.12 3.18
4016 6179 8.967196 ACAAGAAGTGTAGCACAAATGTGAACA 61.967 37.037 17.32 15.61 43.12 3.18
4026 6189 4.290155 ACAAATGTGAACAAAGATCGTGC 58.710 39.130 0.00 0.00 0.00 5.34
4027 6190 4.036734 ACAAATGTGAACAAAGATCGTGCT 59.963 37.500 0.00 0.00 0.00 4.40
4028 6191 4.410492 AATGTGAACAAAGATCGTGCTC 57.590 40.909 0.00 0.00 0.00 4.26
4029 6192 2.143122 TGTGAACAAAGATCGTGCTCC 58.857 47.619 0.00 0.00 0.00 4.70
4030 6193 1.464997 GTGAACAAAGATCGTGCTCCC 59.535 52.381 0.00 0.00 0.00 4.30
4031 6194 1.347707 TGAACAAAGATCGTGCTCCCT 59.652 47.619 0.00 0.00 0.00 4.20
4032 6195 2.003301 GAACAAAGATCGTGCTCCCTC 58.997 52.381 0.00 0.00 0.00 4.30
4033 6196 0.108615 ACAAAGATCGTGCTCCCTCG 60.109 55.000 0.00 0.00 0.00 4.63
4034 6197 1.153549 AAAGATCGTGCTCCCTCGC 60.154 57.895 0.00 0.00 0.00 5.03
4035 6198 1.888436 AAAGATCGTGCTCCCTCGCA 61.888 55.000 0.00 0.00 37.62 5.10
4036 6199 1.888436 AAGATCGTGCTCCCTCGCAA 61.888 55.000 0.00 0.00 42.32 4.85
4037 6200 1.880340 GATCGTGCTCCCTCGCAAG 60.880 63.158 0.00 0.00 42.32 4.01
4038 6201 4.742201 TCGTGCTCCCTCGCAAGC 62.742 66.667 0.00 0.00 42.32 4.01
4041 6204 2.437180 TGCTCCCTCGCAAGCATG 60.437 61.111 0.00 0.00 43.30 4.06
4042 6205 3.207669 GCTCCCTCGCAAGCATGG 61.208 66.667 0.00 0.00 38.42 3.66
4043 6206 3.207669 CTCCCTCGCAAGCATGGC 61.208 66.667 0.00 0.00 37.18 4.40
4051 6214 3.515286 CAAGCATGGCGGCTCCTG 61.515 66.667 11.43 6.47 45.07 3.86
4064 6227 1.897560 GCTCCTGCCATACCAATACC 58.102 55.000 0.00 0.00 0.00 2.73
4065 6228 1.545651 GCTCCTGCCATACCAATACCC 60.546 57.143 0.00 0.00 0.00 3.69
4066 6229 1.073923 CTCCTGCCATACCAATACCCC 59.926 57.143 0.00 0.00 0.00 4.95
4067 6230 0.250727 CCTGCCATACCAATACCCCG 60.251 60.000 0.00 0.00 0.00 5.73
4068 6231 0.762418 CTGCCATACCAATACCCCGA 59.238 55.000 0.00 0.00 0.00 5.14
4069 6232 1.351017 CTGCCATACCAATACCCCGAT 59.649 52.381 0.00 0.00 0.00 4.18
4070 6233 1.777878 TGCCATACCAATACCCCGATT 59.222 47.619 0.00 0.00 0.00 3.34
4071 6234 2.159382 GCCATACCAATACCCCGATTG 58.841 52.381 0.00 0.00 36.70 2.67
4072 6235 2.488347 GCCATACCAATACCCCGATTGT 60.488 50.000 0.00 0.00 35.42 2.71
4073 6236 3.827722 CCATACCAATACCCCGATTGTT 58.172 45.455 0.00 0.00 35.42 2.83
4074 6237 4.211920 CCATACCAATACCCCGATTGTTT 58.788 43.478 0.00 0.00 35.42 2.83
4075 6238 4.647399 CCATACCAATACCCCGATTGTTTT 59.353 41.667 0.00 0.00 35.42 2.43
4076 6239 5.128008 CCATACCAATACCCCGATTGTTTTT 59.872 40.000 0.00 0.00 35.42 1.94
4095 6258 4.508461 TTTTCCGAGAGTACGTCAATGA 57.492 40.909 0.00 0.00 0.00 2.57
4153 6320 6.935741 TTACAAGAAGTGTAGCACAAATGT 57.064 33.333 2.01 4.29 43.61 2.71
4167 6334 2.955660 ACAAATGTGAACATTCGGGTGT 59.044 40.909 9.03 7.16 45.06 4.16
4185 6352 1.003839 TCCACGATGCACCAACTCC 60.004 57.895 0.00 0.00 0.00 3.85
4186 6353 2.040544 CCACGATGCACCAACTCCC 61.041 63.158 0.00 0.00 0.00 4.30
4187 6354 1.003355 CACGATGCACCAACTCCCT 60.003 57.895 0.00 0.00 0.00 4.20
4188 6355 0.249120 CACGATGCACCAACTCCCTA 59.751 55.000 0.00 0.00 0.00 3.53
4189 6356 0.537188 ACGATGCACCAACTCCCTAG 59.463 55.000 0.00 0.00 0.00 3.02
4190 6357 0.824109 CGATGCACCAACTCCCTAGA 59.176 55.000 0.00 0.00 0.00 2.43
4191 6358 1.207089 CGATGCACCAACTCCCTAGAA 59.793 52.381 0.00 0.00 0.00 2.10
4192 6359 2.739932 CGATGCACCAACTCCCTAGAAG 60.740 54.545 0.00 0.00 0.00 2.85
4193 6360 2.024176 TGCACCAACTCCCTAGAAGA 57.976 50.000 0.00 0.00 0.00 2.87
4194 6361 2.334977 TGCACCAACTCCCTAGAAGAA 58.665 47.619 0.00 0.00 0.00 2.52
4195 6362 2.708861 TGCACCAACTCCCTAGAAGAAA 59.291 45.455 0.00 0.00 0.00 2.52
4196 6363 3.137544 TGCACCAACTCCCTAGAAGAAAA 59.862 43.478 0.00 0.00 0.00 2.29
4197 6364 4.202567 TGCACCAACTCCCTAGAAGAAAAT 60.203 41.667 0.00 0.00 0.00 1.82
4198 6365 5.013704 TGCACCAACTCCCTAGAAGAAAATA 59.986 40.000 0.00 0.00 0.00 1.40
4199 6366 5.944007 GCACCAACTCCCTAGAAGAAAATAA 59.056 40.000 0.00 0.00 0.00 1.40
4200 6367 6.094186 GCACCAACTCCCTAGAAGAAAATAAG 59.906 42.308 0.00 0.00 0.00 1.73
4201 6368 7.394816 CACCAACTCCCTAGAAGAAAATAAGA 58.605 38.462 0.00 0.00 0.00 2.10
4202 6369 7.883311 CACCAACTCCCTAGAAGAAAATAAGAA 59.117 37.037 0.00 0.00 0.00 2.52
4203 6370 8.103935 ACCAACTCCCTAGAAGAAAATAAGAAG 58.896 37.037 0.00 0.00 0.00 2.85
4204 6371 7.554476 CCAACTCCCTAGAAGAAAATAAGAAGG 59.446 40.741 0.00 0.00 0.00 3.46
4205 6372 8.322091 CAACTCCCTAGAAGAAAATAAGAAGGA 58.678 37.037 0.00 0.00 0.00 3.36
4206 6373 8.450780 ACTCCCTAGAAGAAAATAAGAAGGAA 57.549 34.615 0.00 0.00 0.00 3.36
4207 6374 8.891501 ACTCCCTAGAAGAAAATAAGAAGGAAA 58.108 33.333 0.00 0.00 0.00 3.13
4208 6375 9.740710 CTCCCTAGAAGAAAATAAGAAGGAAAA 57.259 33.333 0.00 0.00 0.00 2.29
4209 6376 9.516546 TCCCTAGAAGAAAATAAGAAGGAAAAC 57.483 33.333 0.00 0.00 0.00 2.43
4210 6377 9.521841 CCCTAGAAGAAAATAAGAAGGAAAACT 57.478 33.333 0.00 0.00 0.00 2.66
4212 6379 9.833182 CTAGAAGAAAATAAGAAGGAAAACTGC 57.167 33.333 0.00 0.00 0.00 4.40
4213 6380 7.661968 AGAAGAAAATAAGAAGGAAAACTGCC 58.338 34.615 0.00 0.00 0.00 4.85
4214 6381 6.346477 AGAAAATAAGAAGGAAAACTGCCC 57.654 37.500 0.00 0.00 0.00 5.36
4215 6382 5.246203 AGAAAATAAGAAGGAAAACTGCCCC 59.754 40.000 0.00 0.00 0.00 5.80
4216 6383 2.597578 TAAGAAGGAAAACTGCCCCC 57.402 50.000 0.00 0.00 0.00 5.40
4217 6384 0.539669 AAGAAGGAAAACTGCCCCCG 60.540 55.000 0.00 0.00 0.00 5.73
4218 6385 2.600470 AAGGAAAACTGCCCCCGC 60.600 61.111 0.00 0.00 0.00 6.13
4221 6388 3.733960 GAAAACTGCCCCCGCGTC 61.734 66.667 4.92 0.00 38.08 5.19
4245 6412 4.838486 CTGGGCGACTCGAGCGAC 62.838 72.222 26.02 23.99 35.64 5.19
4259 6426 2.579787 CGACGCTCGATCCGCTTT 60.580 61.111 5.64 0.00 43.74 3.51
4260 6427 2.158959 CGACGCTCGATCCGCTTTT 61.159 57.895 5.64 0.00 43.74 2.27
4261 6428 1.683790 CGACGCTCGATCCGCTTTTT 61.684 55.000 5.64 0.00 43.74 1.94
4262 6429 0.025128 GACGCTCGATCCGCTTTTTC 59.975 55.000 5.64 0.00 0.00 2.29
4263 6430 1.348594 CGCTCGATCCGCTTTTTCC 59.651 57.895 0.00 0.00 0.00 3.13
4264 6431 1.348594 GCTCGATCCGCTTTTTCCG 59.651 57.895 0.00 0.00 0.00 4.30
4265 6432 2.006772 CTCGATCCGCTTTTTCCGG 58.993 57.895 0.00 0.00 46.88 5.14
4266 6433 0.739813 CTCGATCCGCTTTTTCCGGT 60.740 55.000 0.00 0.00 45.71 5.28
4267 6434 1.017177 TCGATCCGCTTTTTCCGGTG 61.017 55.000 0.00 0.00 45.71 4.94
4268 6435 1.296056 CGATCCGCTTTTTCCGGTGT 61.296 55.000 0.00 0.00 45.71 4.16
4269 6436 0.446616 GATCCGCTTTTTCCGGTGTC 59.553 55.000 0.00 0.00 45.71 3.67
4270 6437 1.296056 ATCCGCTTTTTCCGGTGTCG 61.296 55.000 0.00 0.00 45.71 4.35
4271 6438 2.248835 CCGCTTTTTCCGGTGTCGT 61.249 57.895 0.00 0.00 40.84 4.34
4272 6439 1.203313 CGCTTTTTCCGGTGTCGTC 59.797 57.895 0.00 0.00 33.95 4.20
4273 6440 1.572941 GCTTTTTCCGGTGTCGTCC 59.427 57.895 0.00 0.00 33.95 4.79
4274 6441 1.848932 GCTTTTTCCGGTGTCGTCCC 61.849 60.000 0.00 0.00 33.95 4.46
4275 6442 0.250166 CTTTTTCCGGTGTCGTCCCT 60.250 55.000 0.00 0.00 33.95 4.20
4276 6443 0.533308 TTTTTCCGGTGTCGTCCCTG 60.533 55.000 0.00 0.00 33.95 4.45
4277 6444 1.688269 TTTTCCGGTGTCGTCCCTGT 61.688 55.000 0.00 0.00 33.95 4.00
4278 6445 2.372040 TTTCCGGTGTCGTCCCTGTG 62.372 60.000 0.00 0.00 33.95 3.66
4284 6451 4.681978 GTCGTCCCTGTGCGCCTT 62.682 66.667 4.18 0.00 0.00 4.35
4285 6452 4.373116 TCGTCCCTGTGCGCCTTC 62.373 66.667 4.18 0.00 0.00 3.46
4290 6457 4.785453 CCTGTGCGCCTTCCCCTC 62.785 72.222 4.18 0.00 0.00 4.30
4315 6482 4.508128 CCGGTCGGTGTCATCGGG 62.508 72.222 5.50 0.00 37.35 5.14
4317 6484 4.832608 GGTCGGTGTCATCGGGCC 62.833 72.222 5.50 5.02 0.00 5.80
4318 6485 3.771160 GTCGGTGTCATCGGGCCT 61.771 66.667 5.50 0.00 0.00 5.19
4319 6486 3.000819 TCGGTGTCATCGGGCCTT 61.001 61.111 5.50 0.00 0.00 4.35
4320 6487 2.819595 CGGTGTCATCGGGCCTTG 60.820 66.667 0.84 0.00 0.00 3.61
4321 6488 3.134127 GGTGTCATCGGGCCTTGC 61.134 66.667 0.84 0.00 0.00 4.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 3.249189 AGCTTCAGGGGTTGCGGA 61.249 61.111 0.00 0.00 0.00 5.54
12 13 0.250901 TTCAGAGCTTCAGGGGTTGC 60.251 55.000 0.00 0.00 0.00 4.17
47 48 1.053424 TGTCCAGCGGGTAGACTTTT 58.947 50.000 1.81 0.00 34.93 2.27
116 120 1.039785 CGTCTCCCATCTCCTGCTCA 61.040 60.000 0.00 0.00 0.00 4.26
170 174 4.560128 CGAGATCAAAGTCAAGGAAGTCA 58.440 43.478 0.00 0.00 0.00 3.41
179 183 1.541379 TCGTCCCGAGATCAAAGTCA 58.459 50.000 0.00 0.00 0.00 3.41
185 189 1.444917 CGTCCATCGTCCCGAGATCA 61.445 60.000 0.00 0.00 39.91 2.92
212 216 0.808847 GGGACCTCATTTCGCCGTAC 60.809 60.000 0.00 0.00 0.00 3.67
242 246 1.209504 TCCTCCAAATCATCGTCCCAC 59.790 52.381 0.00 0.00 0.00 4.61
251 255 1.275666 TCTCGCCTTCCTCCAAATCA 58.724 50.000 0.00 0.00 0.00 2.57
252 256 2.488952 GATCTCGCCTTCCTCCAAATC 58.511 52.381 0.00 0.00 0.00 2.17
253 257 1.141858 GGATCTCGCCTTCCTCCAAAT 59.858 52.381 0.00 0.00 0.00 2.32
254 258 0.541863 GGATCTCGCCTTCCTCCAAA 59.458 55.000 0.00 0.00 0.00 3.28
335 342 1.606668 CAAAGCGACTGCCTAACCAAA 59.393 47.619 0.00 0.00 44.31 3.28
369 376 4.103943 TGCCAATGCTAGTAATACATGGGA 59.896 41.667 5.19 0.00 37.09 4.37
370 377 4.397420 TGCCAATGCTAGTAATACATGGG 58.603 43.478 0.00 0.00 37.85 4.00
371 378 6.579666 AATGCCAATGCTAGTAATACATGG 57.420 37.500 0.00 0.00 38.71 3.66
372 379 8.327941 ACTAATGCCAATGCTAGTAATACATG 57.672 34.615 0.00 0.00 38.71 3.21
373 380 9.436957 GTACTAATGCCAATGCTAGTAATACAT 57.563 33.333 0.00 0.00 34.43 2.29
374 381 7.876068 GGTACTAATGCCAATGCTAGTAATACA 59.124 37.037 0.00 0.00 34.43 2.29
375 382 7.876068 TGGTACTAATGCCAATGCTAGTAATAC 59.124 37.037 0.00 0.00 37.71 1.89
378 385 6.053005 GTGGTACTAATGCCAATGCTAGTAA 58.947 40.000 0.00 0.00 42.96 2.24
470 501 5.830912 TGCAGAGTTACAACCTCAAAATTG 58.169 37.500 0.00 0.00 0.00 2.32
496 572 2.467946 CTTGCTTGACAGGCCTTGCG 62.468 60.000 0.00 0.00 0.00 4.85
517 593 2.744202 CGGCTTCACTTAATGACTGCTT 59.256 45.455 0.00 0.00 36.92 3.91
518 594 2.350522 CGGCTTCACTTAATGACTGCT 58.649 47.619 0.00 0.00 36.92 4.24
520 596 1.398390 GCCGGCTTCACTTAATGACTG 59.602 52.381 22.15 0.00 36.92 3.51
543 619 3.002656 CCCACAACTATGATCGACATTGC 59.997 47.826 5.94 0.00 40.07 3.56
545 621 4.487714 ACCCACAACTATGATCGACATT 57.512 40.909 5.94 0.00 40.07 2.71
546 622 4.501571 GCTACCCACAACTATGATCGACAT 60.502 45.833 0.00 0.00 42.39 3.06
548 624 3.181479 TGCTACCCACAACTATGATCGAC 60.181 47.826 0.00 0.00 0.00 4.20
564 642 6.060028 TCTTTCGCAATTTCATATGCTACC 57.940 37.500 0.00 0.00 40.39 3.18
568 646 5.972973 TCACATCTTTCGCAATTTCATATGC 59.027 36.000 0.00 0.00 39.17 3.14
569 647 7.646526 ACATCACATCTTTCGCAATTTCATATG 59.353 33.333 0.00 0.00 0.00 1.78
572 650 5.957798 ACATCACATCTTTCGCAATTTCAT 58.042 33.333 0.00 0.00 0.00 2.57
573 651 5.375417 ACATCACATCTTTCGCAATTTCA 57.625 34.783 0.00 0.00 0.00 2.69
574 652 7.912250 AGATAACATCACATCTTTCGCAATTTC 59.088 33.333 0.00 0.00 0.00 2.17
575 653 7.765307 AGATAACATCACATCTTTCGCAATTT 58.235 30.769 0.00 0.00 0.00 1.82
576 654 7.325660 AGATAACATCACATCTTTCGCAATT 57.674 32.000 0.00 0.00 0.00 2.32
577 655 6.932356 AGATAACATCACATCTTTCGCAAT 57.068 33.333 0.00 0.00 0.00 3.56
578 656 7.710475 TCATAGATAACATCACATCTTTCGCAA 59.290 33.333 0.00 0.00 33.58 4.85
582 660 8.006590 GCGTTCATAGATAACATCACATCTTTC 58.993 37.037 0.00 0.00 33.58 2.62
587 665 6.930722 TGATGCGTTCATAGATAACATCACAT 59.069 34.615 0.00 0.00 37.95 3.21
616 694 2.758736 ATCTCTGACCAGCAACAGAC 57.241 50.000 0.00 0.00 38.08 3.51
672 752 3.424703 CACACCAGGTCCTTCATGAAAT 58.575 45.455 9.88 0.00 0.00 2.17
676 756 0.037303 AGCACACCAGGTCCTTCATG 59.963 55.000 0.00 0.00 0.00 3.07
677 757 0.773644 AAGCACACCAGGTCCTTCAT 59.226 50.000 0.00 0.00 0.00 2.57
678 758 0.550914 AAAGCACACCAGGTCCTTCA 59.449 50.000 0.00 0.00 0.00 3.02
679 759 1.202818 AGAAAGCACACCAGGTCCTTC 60.203 52.381 0.00 0.00 0.00 3.46
681 761 0.398318 GAGAAAGCACACCAGGTCCT 59.602 55.000 0.00 0.00 0.00 3.85
682 762 0.951040 CGAGAAAGCACACCAGGTCC 60.951 60.000 0.00 0.00 0.00 4.46
683 763 0.249911 ACGAGAAAGCACACCAGGTC 60.250 55.000 0.00 0.00 0.00 3.85
684 764 0.532862 CACGAGAAAGCACACCAGGT 60.533 55.000 0.00 0.00 0.00 4.00
685 765 1.230635 CCACGAGAAAGCACACCAGG 61.231 60.000 0.00 0.00 0.00 4.45
686 766 1.845809 GCCACGAGAAAGCACACCAG 61.846 60.000 0.00 0.00 0.00 4.00
687 767 1.891919 GCCACGAGAAAGCACACCA 60.892 57.895 0.00 0.00 0.00 4.17
688 768 1.444119 TTGCCACGAGAAAGCACACC 61.444 55.000 0.00 0.00 35.96 4.16
689 769 0.040958 CTTGCCACGAGAAAGCACAC 60.041 55.000 0.00 0.00 35.96 3.82
690 770 1.785041 GCTTGCCACGAGAAAGCACA 61.785 55.000 15.28 0.00 44.53 4.57
691 771 1.081840 GCTTGCCACGAGAAAGCAC 60.082 57.895 15.28 0.00 44.53 4.40
692 772 1.227943 AGCTTGCCACGAGAAAGCA 60.228 52.632 20.21 5.78 46.94 3.91
697 777 0.898326 TACTCCAGCTTGCCACGAGA 60.898 55.000 0.00 0.00 0.00 4.04
704 1172 2.354199 GCATTCTCTTACTCCAGCTTGC 59.646 50.000 0.00 0.00 0.00 4.01
710 1178 2.166459 CCTCACGCATTCTCTTACTCCA 59.834 50.000 0.00 0.00 0.00 3.86
711 1179 2.482142 CCCTCACGCATTCTCTTACTCC 60.482 54.545 0.00 0.00 0.00 3.85
717 1185 0.820871 GTCTCCCTCACGCATTCTCT 59.179 55.000 0.00 0.00 0.00 3.10
721 1189 0.904865 TCAGGTCTCCCTCACGCATT 60.905 55.000 0.00 0.00 39.89 3.56
723 1191 1.533033 TTCAGGTCTCCCTCACGCA 60.533 57.895 0.00 0.00 39.89 5.24
724 1192 1.079750 GTTCAGGTCTCCCTCACGC 60.080 63.158 0.00 0.00 39.89 5.34
725 1193 0.244994 CAGTTCAGGTCTCCCTCACG 59.755 60.000 0.00 0.00 39.89 4.35
731 1593 2.887152 ACATTTTGCAGTTCAGGTCTCC 59.113 45.455 0.00 0.00 0.00 3.71
737 1599 8.075574 TGTATAAAGACACATTTTGCAGTTCAG 58.924 33.333 0.00 0.00 0.00 3.02
738 1600 7.935520 TGTATAAAGACACATTTTGCAGTTCA 58.064 30.769 0.00 0.00 0.00 3.18
762 1627 9.738832 ATGCATTTTGGAAAGAAAAGAAATTTG 57.261 25.926 0.00 0.00 0.00 2.32
767 1632 9.612066 AGTAAATGCATTTTGGAAAGAAAAGAA 57.388 25.926 28.45 3.80 0.00 2.52
768 1633 9.612066 AAGTAAATGCATTTTGGAAAGAAAAGA 57.388 25.926 28.45 4.24 0.00 2.52
774 1646 7.636259 TCGAAAGTAAATGCATTTTGGAAAG 57.364 32.000 28.45 16.27 0.00 2.62
824 1696 8.736244 CCTTCCGTCCAAGAAAGAAAATATTTA 58.264 33.333 0.01 0.00 0.00 1.40
859 1733 9.543783 ACTACGTACTTCTTTTCATTTCTTTCT 57.456 29.630 0.00 0.00 0.00 2.52
901 1775 2.820197 GCCCTTCTTTTTGTGTAGGAGG 59.180 50.000 0.00 0.00 36.97 4.30
941 1826 1.663379 CTGGTGGGTCGCGTGATAGA 61.663 60.000 5.77 0.00 0.00 1.98
942 1827 1.226974 CTGGTGGGTCGCGTGATAG 60.227 63.158 5.77 0.00 0.00 2.08
943 1828 2.717044 CCTGGTGGGTCGCGTGATA 61.717 63.158 5.77 0.00 0.00 2.15
980 1900 4.927782 GTGTGCTGTGGGGTGCGA 62.928 66.667 0.00 0.00 0.00 5.10
983 1903 3.512154 ATGGGTGTGCTGTGGGGTG 62.512 63.158 0.00 0.00 0.00 4.61
984 1904 3.185203 ATGGGTGTGCTGTGGGGT 61.185 61.111 0.00 0.00 0.00 4.95
985 1905 2.677524 CATGGGTGTGCTGTGGGG 60.678 66.667 0.00 0.00 0.00 4.96
1094 2020 1.348775 GGGGAAGAGGGGGATCTGTG 61.349 65.000 0.00 0.00 0.00 3.66
1106 2032 2.459710 GGGAGGGGAAGGGGAAGA 59.540 66.667 0.00 0.00 0.00 2.87
1114 2048 4.089757 CCGAGGAGGGGAGGGGAA 62.090 72.222 0.00 0.00 35.97 3.97
1146 2080 1.060713 GAACGACACACACGGATCAG 58.939 55.000 0.00 0.00 34.93 2.90
1376 2312 1.360551 CTGATAGGCCCTCGTGACG 59.639 63.158 0.00 0.00 0.00 4.35
1377 2313 1.043673 ACCTGATAGGCCCTCGTGAC 61.044 60.000 0.00 0.00 39.63 3.67
1385 2321 1.680338 AAATCGCAACCTGATAGGCC 58.320 50.000 0.00 0.00 39.63 5.19
1387 2323 4.260620 CCGTTAAAATCGCAACCTGATAGG 60.261 45.833 0.00 0.00 42.49 2.57
1407 2346 2.970640 GGATTATCTACCACTTCCCCGT 59.029 50.000 0.00 0.00 0.00 5.28
1441 2380 2.317609 CCGAGTGGAACAACTGGCG 61.318 63.158 0.00 0.00 44.16 5.69
1442 2381 1.227853 ACCGAGTGGAACAACTGGC 60.228 57.895 0.00 0.00 44.16 4.85
1443 2382 2.616969 CACCGAGTGGAACAACTGG 58.383 57.895 0.00 0.00 44.16 4.00
1453 2392 4.137116 TGAAGATAAATCCCACCGAGTG 57.863 45.455 0.00 0.00 0.00 3.51
1454 2393 4.164221 ACATGAAGATAAATCCCACCGAGT 59.836 41.667 0.00 0.00 0.00 4.18
1514 2479 4.464008 TCTTCCCAATTCACAGGCATATC 58.536 43.478 0.00 0.00 0.00 1.63
1547 2513 5.408299 TCCTGTATGTCGACAATTCAAAGTG 59.592 40.000 24.13 9.46 0.00 3.16
1564 2531 3.104512 TCCCACTGAATTCGTCCTGTAT 58.895 45.455 0.04 0.00 0.00 2.29
1565 2532 2.531771 TCCCACTGAATTCGTCCTGTA 58.468 47.619 0.04 0.00 0.00 2.74
1567 2534 2.289694 ACTTCCCACTGAATTCGTCCTG 60.290 50.000 0.04 0.00 31.06 3.86
1569 2536 2.028020 AGACTTCCCACTGAATTCGTCC 60.028 50.000 0.04 0.00 37.63 4.79
1572 2539 3.045601 ACAGACTTCCCACTGAATTCG 57.954 47.619 0.04 0.00 37.63 3.34
1611 2578 3.171277 GTTGAAACCGTGCTATGCATTC 58.829 45.455 3.54 0.00 41.91 2.67
1657 2624 4.521146 CAAAGCCAGGACAGATGAGTAAT 58.479 43.478 0.00 0.00 0.00 1.89
1689 2656 5.359860 TCACTCGCTAGAATAGAATCACCAA 59.640 40.000 0.00 0.00 42.77 3.67
1699 2666 7.394870 CGAATCAAATTCACTCGCTAGAATA 57.605 36.000 0.00 0.00 39.22 1.75
1707 2674 3.242220 CCTCAGCGAATCAAATTCACTCG 60.242 47.826 0.00 0.00 39.22 4.18
1708 2675 3.486542 GCCTCAGCGAATCAAATTCACTC 60.487 47.826 0.00 0.00 39.22 3.51
1709 2676 2.421424 GCCTCAGCGAATCAAATTCACT 59.579 45.455 0.00 0.00 39.22 3.41
1710 2677 2.421424 AGCCTCAGCGAATCAAATTCAC 59.579 45.455 0.00 0.00 46.67 3.18
1711 2678 2.715046 AGCCTCAGCGAATCAAATTCA 58.285 42.857 0.00 0.00 46.67 2.57
1712 2679 3.772060 AAGCCTCAGCGAATCAAATTC 57.228 42.857 0.00 0.00 46.67 2.17
1713 2680 3.119352 GGAAAGCCTCAGCGAATCAAATT 60.119 43.478 0.00 0.00 46.67 1.82
1714 2681 2.424956 GGAAAGCCTCAGCGAATCAAAT 59.575 45.455 0.00 0.00 46.67 2.32
1715 2682 1.812571 GGAAAGCCTCAGCGAATCAAA 59.187 47.619 0.00 0.00 46.67 2.69
1716 2683 1.453155 GGAAAGCCTCAGCGAATCAA 58.547 50.000 0.00 0.00 46.67 2.57
1723 2690 2.035442 GTCCACGGAAAGCCTCAGC 61.035 63.158 0.00 0.00 40.32 4.26
1769 2743 0.537188 ATGGGTTCCTACTCACGCTG 59.463 55.000 0.00 0.00 37.65 5.18
1774 2748 0.618458 GCCACATGGGTTCCTACTCA 59.382 55.000 0.00 0.00 39.58 3.41
1818 2792 6.520272 CAACCATGATTGGAAAACCTGTAAA 58.480 36.000 0.00 0.00 46.92 2.01
1857 2831 3.116959 ACCGACCATCCCATAAGGTTTA 58.883 45.455 0.00 0.00 35.36 2.01
1858 2832 1.920351 ACCGACCATCCCATAAGGTTT 59.080 47.619 0.00 0.00 35.36 3.27
1860 2840 0.837272 CACCGACCATCCCATAAGGT 59.163 55.000 0.00 0.00 38.63 3.50
1868 2848 2.093128 AGTAAATCACCACCGACCATCC 60.093 50.000 0.00 0.00 0.00 3.51
1873 2853 4.454504 ACAAATCAGTAAATCACCACCGAC 59.545 41.667 0.00 0.00 0.00 4.79
1876 2856 4.218417 AGCACAAATCAGTAAATCACCACC 59.782 41.667 0.00 0.00 0.00 4.61
1878 2858 6.237901 ACTAGCACAAATCAGTAAATCACCA 58.762 36.000 0.00 0.00 0.00 4.17
1887 2867 4.569943 ACGATCAACTAGCACAAATCAGT 58.430 39.130 0.00 0.00 0.00 3.41
1888 2868 5.536554 AACGATCAACTAGCACAAATCAG 57.463 39.130 0.00 0.00 0.00 2.90
1889 2869 5.940192 AAACGATCAACTAGCACAAATCA 57.060 34.783 0.00 0.00 0.00 2.57
1890 2870 5.795441 GGAAAACGATCAACTAGCACAAATC 59.205 40.000 0.00 0.00 0.00 2.17
1891 2871 5.240623 TGGAAAACGATCAACTAGCACAAAT 59.759 36.000 0.00 0.00 0.00 2.32
1892 2872 4.576873 TGGAAAACGATCAACTAGCACAAA 59.423 37.500 0.00 0.00 0.00 2.83
1895 2875 4.201822 GGATGGAAAACGATCAACTAGCAC 60.202 45.833 0.00 0.00 0.00 4.40
1896 2876 3.938963 GGATGGAAAACGATCAACTAGCA 59.061 43.478 0.00 0.00 0.00 3.49
1897 2877 3.001330 CGGATGGAAAACGATCAACTAGC 59.999 47.826 0.00 0.00 0.00 3.42
1898 2878 3.555956 CCGGATGGAAAACGATCAACTAG 59.444 47.826 0.00 0.00 37.49 2.57
1899 2879 3.196039 TCCGGATGGAAAACGATCAACTA 59.804 43.478 0.00 0.00 42.85 2.24
1900 2880 2.027561 TCCGGATGGAAAACGATCAACT 60.028 45.455 0.00 0.00 42.85 3.16
1901 2881 2.352388 TCCGGATGGAAAACGATCAAC 58.648 47.619 0.00 0.00 42.85 3.18
1902 2882 2.772077 TCCGGATGGAAAACGATCAA 57.228 45.000 0.00 0.00 42.85 2.57
1918 2898 2.037121 TGATATGTAGTGGCCATGTCCG 59.963 50.000 9.72 0.00 31.60 4.79
1972 2964 1.068588 GTGGTGCGTGATAGCCTATCA 59.931 52.381 10.37 10.37 42.56 2.15
1986 2978 3.822594 TCGTCATACAAAATGTGGTGC 57.177 42.857 0.00 0.00 0.00 5.01
1987 2979 5.544136 TCATCGTCATACAAAATGTGGTG 57.456 39.130 0.00 0.00 0.00 4.17
2004 2996 4.025145 CACTTCACCACATCATCATCATCG 60.025 45.833 0.00 0.00 0.00 3.84
2012 3004 3.726557 ATCACCACTTCACCACATCAT 57.273 42.857 0.00 0.00 0.00 2.45
2035 3027 2.484264 GAGGACTGTTTTCCCACATTCG 59.516 50.000 0.00 0.00 36.12 3.34
2044 3036 1.977056 AAACCCCGAGGACTGTTTTC 58.023 50.000 0.00 0.00 36.73 2.29
2046 3038 1.478105 GGAAAACCCCGAGGACTGTTT 60.478 52.381 0.00 0.00 36.73 2.83
2060 3052 3.569701 TGAATCTGCCAAGACAGGAAAAC 59.430 43.478 0.00 0.00 38.26 2.43
2171 3188 2.279935 AACCACGCCACTTATTTCCA 57.720 45.000 0.00 0.00 0.00 3.53
2196 3213 7.011857 GTGGCATGGTTTTAGTTCAAAAATTGA 59.988 33.333 0.00 0.00 37.85 2.57
2197 3214 7.012232 AGTGGCATGGTTTTAGTTCAAAAATTG 59.988 33.333 0.00 0.00 37.85 2.32
2198 3215 7.053498 AGTGGCATGGTTTTAGTTCAAAAATT 58.947 30.769 0.00 0.00 37.85 1.82
2199 3216 6.591001 AGTGGCATGGTTTTAGTTCAAAAAT 58.409 32.000 0.00 0.00 37.85 1.82
2200 3217 5.983540 AGTGGCATGGTTTTAGTTCAAAAA 58.016 33.333 0.00 0.00 37.85 1.94
2201 3218 5.606348 AGTGGCATGGTTTTAGTTCAAAA 57.394 34.783 0.00 0.00 33.66 2.44
2202 3219 5.606348 AAGTGGCATGGTTTTAGTTCAAA 57.394 34.783 0.00 0.00 0.00 2.69
2205 3222 6.599638 AGAGATAAGTGGCATGGTTTTAGTTC 59.400 38.462 0.00 0.00 0.00 3.01
2216 3233 4.135306 CTGCATTCAGAGATAAGTGGCAT 58.865 43.478 0.00 0.00 42.95 4.40
2217 3234 3.538591 CTGCATTCAGAGATAAGTGGCA 58.461 45.455 0.00 0.00 42.95 4.92
2218 3235 2.877168 CCTGCATTCAGAGATAAGTGGC 59.123 50.000 0.00 0.00 42.95 5.01
2227 3244 8.734386 GGGAAATAATATTACCTGCATTCAGAG 58.266 37.037 0.00 0.00 42.95 3.35
2236 3253 7.823745 ACAAGCTGGGAAATAATATTACCTG 57.176 36.000 0.00 0.55 34.10 4.00
2425 3450 6.060028 TCGTATTTGCATTAAGAAGCCATC 57.940 37.500 0.00 0.00 0.00 3.51
2428 3453 6.972328 TCAAATCGTATTTGCATTAAGAAGCC 59.028 34.615 12.59 0.00 0.00 4.35
2429 3454 7.969387 TCAAATCGTATTTGCATTAAGAAGC 57.031 32.000 12.59 0.00 0.00 3.86
2446 3472 6.545508 TGTTTGACAGCTCATAATCAAATCG 58.454 36.000 8.85 0.00 41.64 3.34
2489 3517 5.880332 TCAACAAACACTTTTCTGCTCTAGT 59.120 36.000 0.00 0.00 0.00 2.57
2503 3535 7.125113 CAGGCAAAACAATAATCAACAAACAC 58.875 34.615 0.00 0.00 0.00 3.32
2577 3611 1.908619 TGCCTACTCCATCTGCAAAGA 59.091 47.619 0.00 0.00 0.00 2.52
2640 3674 9.525409 GCAGATCTGAAATAAAATAATGCAAGT 57.475 29.630 27.04 0.00 0.00 3.16
2644 3678 6.860023 AGCGCAGATCTGAAATAAAATAATGC 59.140 34.615 27.04 5.35 0.00 3.56
2723 3823 6.440647 TCCAGTGACTCAAGTATTTCTATGGT 59.559 38.462 0.00 0.00 0.00 3.55
2751 3852 9.871238 AATATTGTACAACCTAGTAGACAACTG 57.129 33.333 11.22 0.00 39.39 3.16
2758 3859 8.857098 TCCAGCTAATATTGTACAACCTAGTAG 58.143 37.037 11.22 13.58 0.00 2.57
2760 3861 7.670605 TCCAGCTAATATTGTACAACCTAGT 57.329 36.000 11.22 2.43 0.00 2.57
2761 3862 8.204836 AGTTCCAGCTAATATTGTACAACCTAG 58.795 37.037 11.22 12.23 0.00 3.02
2762 3863 7.985184 CAGTTCCAGCTAATATTGTACAACCTA 59.015 37.037 11.22 0.45 0.00 3.08
2763 3864 6.823689 CAGTTCCAGCTAATATTGTACAACCT 59.176 38.462 11.22 0.00 0.00 3.50
2766 3867 8.511321 CAAACAGTTCCAGCTAATATTGTACAA 58.489 33.333 11.41 11.41 0.00 2.41
2768 3869 8.263940 TCAAACAGTTCCAGCTAATATTGTAC 57.736 34.615 0.00 0.00 0.00 2.90
2769 3870 7.552687 CCTCAAACAGTTCCAGCTAATATTGTA 59.447 37.037 0.00 0.00 0.00 2.41
2780 3881 2.874701 CAGTGACCTCAAACAGTTCCAG 59.125 50.000 0.00 0.00 0.00 3.86
2882 4156 4.984161 CACAAAAGCTGGTTACCTCATTTG 59.016 41.667 16.60 16.60 33.85 2.32
2907 4181 8.428063 CCTATGGTGATCATCTACTCTTCTTTT 58.572 37.037 7.64 0.00 37.30 2.27
3091 4402 5.765677 GGAGGCTGGGAGAAGATTAAATAAC 59.234 44.000 0.00 0.00 0.00 1.89
3094 4405 4.050757 AGGAGGCTGGGAGAAGATTAAAT 58.949 43.478 0.00 0.00 0.00 1.40
3113 4424 3.132646 ACAATTTGCAAGCTCAACAAGGA 59.867 39.130 0.00 0.00 0.00 3.36
3118 4429 6.306356 CACAGTATACAATTTGCAAGCTCAAC 59.694 38.462 5.50 0.00 0.00 3.18
3194 4514 1.338105 GGCAATGAAGAAAAGGGGCAC 60.338 52.381 0.00 0.00 0.00 5.01
3209 4529 1.476488 GTTTTACATCAGCCGGGCAAT 59.524 47.619 23.09 11.47 0.00 3.56
3210 4530 0.885196 GTTTTACATCAGCCGGGCAA 59.115 50.000 23.09 9.36 0.00 4.52
3213 4533 1.821216 ACAGTTTTACATCAGCCGGG 58.179 50.000 2.18 0.00 0.00 5.73
3216 4536 8.587952 AAAATAACAACAGTTTTACATCAGCC 57.412 30.769 0.00 0.00 0.00 4.85
3281 4602 3.461773 CTGTCGCGGGGGATGAGT 61.462 66.667 6.13 0.00 0.00 3.41
3311 4632 0.109272 CTGACTAGAAAGACGCCGCA 60.109 55.000 0.00 0.00 0.00 5.69
3417 4745 6.481976 TGGCTGTTGATGGTAAATTATACTCG 59.518 38.462 0.00 0.00 0.00 4.18
3482 5437 1.372499 CAGCAACACATGGCACTGC 60.372 57.895 0.00 0.23 0.00 4.40
3528 5486 2.681848 CCATGGCTTTCAAGAGCAGTAG 59.318 50.000 0.00 0.00 44.49 2.57
3640 5609 3.642848 ACAGAATTGGTTTGTCAATGCCT 59.357 39.130 7.82 0.00 37.42 4.75
3644 5613 5.291971 GCTTCACAGAATTGGTTTGTCAAT 58.708 37.500 0.00 0.00 38.84 2.57
3646 5615 3.068024 GGCTTCACAGAATTGGTTTGTCA 59.932 43.478 0.00 0.00 0.00 3.58
3648 5617 3.030291 TGGCTTCACAGAATTGGTTTGT 58.970 40.909 0.00 0.00 0.00 2.83
3651 5620 4.751767 TTTTGGCTTCACAGAATTGGTT 57.248 36.364 0.00 0.00 0.00 3.67
3652 5621 4.751767 TTTTTGGCTTCACAGAATTGGT 57.248 36.364 0.00 0.00 0.00 3.67
3654 5623 5.754406 TGTCATTTTTGGCTTCACAGAATTG 59.246 36.000 0.00 0.00 0.00 2.32
3655 5624 5.916318 TGTCATTTTTGGCTTCACAGAATT 58.084 33.333 0.00 0.00 0.00 2.17
3656 5625 5.534207 TGTCATTTTTGGCTTCACAGAAT 57.466 34.783 0.00 0.00 0.00 2.40
3658 5627 4.341806 ACATGTCATTTTTGGCTTCACAGA 59.658 37.500 0.00 0.00 0.00 3.41
3689 5812 1.322442 GCATAGGCAAAGGGATGACC 58.678 55.000 0.00 0.00 40.72 4.02
3739 5864 4.750598 AGTTTCTTTCACGGCTTCTCTAAC 59.249 41.667 0.00 0.00 0.00 2.34
3752 5877 5.659440 AAGAAGGCAAACAGTTTCTTTCA 57.341 34.783 15.88 0.00 36.72 2.69
3778 5903 3.146066 GTCTCCTAACAATTGTGTGGCA 58.854 45.455 12.82 4.95 38.27 4.92
3785 5910 5.765182 ACAGAACCTTGTCTCCTAACAATTG 59.235 40.000 3.24 3.24 38.41 2.32
3845 5973 5.197451 TGGTCATGGACACTAAACAAAAGT 58.803 37.500 0.00 0.00 33.68 2.66
3846 5974 5.278463 CCTGGTCATGGACACTAAACAAAAG 60.278 44.000 0.00 0.00 33.68 2.27
3847 5975 4.582656 CCTGGTCATGGACACTAAACAAAA 59.417 41.667 0.00 0.00 33.68 2.44
3851 5986 2.084546 GCCTGGTCATGGACACTAAAC 58.915 52.381 0.00 0.00 33.68 2.01
3855 5990 2.606587 GGGCCTGGTCATGGACACT 61.607 63.158 0.84 0.00 33.26 3.55
3858 5993 0.967380 CTTTGGGCCTGGTCATGGAC 60.967 60.000 4.53 0.00 0.00 4.02
3860 5995 0.032813 ATCTTTGGGCCTGGTCATGG 60.033 55.000 4.53 0.00 0.00 3.66
3867 6002 1.372087 GAGCACGATCTTTGGGCCTG 61.372 60.000 4.53 0.00 0.00 4.85
3977 6140 8.947115 GCTACACTTCTTGTAAATATGTTTCCT 58.053 33.333 0.00 0.00 40.33 3.36
3978 6141 8.726988 TGCTACACTTCTTGTAAATATGTTTCC 58.273 33.333 0.00 0.00 40.33 3.13
3979 6142 9.543018 GTGCTACACTTCTTGTAAATATGTTTC 57.457 33.333 0.00 0.00 40.33 2.78
3980 6143 9.062524 TGTGCTACACTTCTTGTAAATATGTTT 57.937 29.630 0.00 0.00 40.33 2.83
3981 6144 8.615878 TGTGCTACACTTCTTGTAAATATGTT 57.384 30.769 0.00 0.00 40.33 2.71
3982 6145 8.615878 TTGTGCTACACTTCTTGTAAATATGT 57.384 30.769 0.00 0.00 40.33 2.29
3985 6148 9.062524 ACATTTGTGCTACACTTCTTGTAAATA 57.937 29.630 0.00 0.00 40.33 1.40
3986 6149 7.862372 CACATTTGTGCTACACTTCTTGTAAAT 59.138 33.333 0.00 0.00 37.39 1.40
3987 6150 7.066404 TCACATTTGTGCTACACTTCTTGTAAA 59.934 33.333 5.81 0.00 45.25 2.01
3988 6151 6.540551 TCACATTTGTGCTACACTTCTTGTAA 59.459 34.615 5.81 0.00 45.25 2.41
3989 6152 6.052360 TCACATTTGTGCTACACTTCTTGTA 58.948 36.000 5.81 0.00 45.25 2.41
3990 6153 4.881273 TCACATTTGTGCTACACTTCTTGT 59.119 37.500 5.81 0.00 45.25 3.16
3991 6154 5.422666 TCACATTTGTGCTACACTTCTTG 57.577 39.130 5.81 0.00 45.25 3.02
3992 6155 5.356751 TGTTCACATTTGTGCTACACTTCTT 59.643 36.000 5.81 0.00 45.25 2.52
3993 6156 4.881273 TGTTCACATTTGTGCTACACTTCT 59.119 37.500 5.81 0.00 45.25 2.85
3994 6157 5.168526 TGTTCACATTTGTGCTACACTTC 57.831 39.130 5.81 0.00 45.25 3.01
3995 6158 5.574891 TTGTTCACATTTGTGCTACACTT 57.425 34.783 14.10 0.00 45.25 3.16
3996 6159 5.356751 TCTTTGTTCACATTTGTGCTACACT 59.643 36.000 14.10 0.00 45.25 3.55
3997 6160 5.577835 TCTTTGTTCACATTTGTGCTACAC 58.422 37.500 14.10 6.59 45.25 2.90
3998 6161 5.826601 TCTTTGTTCACATTTGTGCTACA 57.173 34.783 5.81 9.41 45.25 2.74
3999 6162 5.565259 CGATCTTTGTTCACATTTGTGCTAC 59.435 40.000 5.81 7.19 45.25 3.58
4000 6163 5.238432 ACGATCTTTGTTCACATTTGTGCTA 59.762 36.000 5.81 0.00 45.25 3.49
4001 6164 4.036734 ACGATCTTTGTTCACATTTGTGCT 59.963 37.500 5.81 0.00 45.25 4.40
4002 6165 4.146961 CACGATCTTTGTTCACATTTGTGC 59.853 41.667 5.81 0.00 45.25 4.57
4003 6166 4.146961 GCACGATCTTTGTTCACATTTGTG 59.853 41.667 4.29 4.29 46.91 3.33
4004 6167 4.036734 AGCACGATCTTTGTTCACATTTGT 59.963 37.500 0.00 0.00 0.00 2.83
4005 6168 4.539870 AGCACGATCTTTGTTCACATTTG 58.460 39.130 0.00 0.00 0.00 2.32
4006 6169 4.320494 GGAGCACGATCTTTGTTCACATTT 60.320 41.667 9.31 0.00 0.00 2.32
4007 6170 3.189287 GGAGCACGATCTTTGTTCACATT 59.811 43.478 9.31 0.00 0.00 2.71
4008 6171 2.744202 GGAGCACGATCTTTGTTCACAT 59.256 45.455 9.31 0.00 0.00 3.21
4009 6172 2.143122 GGAGCACGATCTTTGTTCACA 58.857 47.619 9.31 0.00 0.00 3.58
4010 6173 1.464997 GGGAGCACGATCTTTGTTCAC 59.535 52.381 9.31 3.35 0.00 3.18
4011 6174 1.347707 AGGGAGCACGATCTTTGTTCA 59.652 47.619 9.31 0.00 0.00 3.18
4012 6175 2.003301 GAGGGAGCACGATCTTTGTTC 58.997 52.381 0.00 0.00 0.00 3.18
4013 6176 1.673033 CGAGGGAGCACGATCTTTGTT 60.673 52.381 0.00 0.00 0.00 2.83
4014 6177 0.108615 CGAGGGAGCACGATCTTTGT 60.109 55.000 0.00 0.00 0.00 2.83
4015 6178 1.424493 GCGAGGGAGCACGATCTTTG 61.424 60.000 0.00 0.00 37.05 2.77
4016 6179 1.153549 GCGAGGGAGCACGATCTTT 60.154 57.895 0.00 0.00 37.05 2.52
4017 6180 2.351244 TGCGAGGGAGCACGATCTT 61.351 57.895 0.00 0.00 42.92 2.40
4018 6181 2.755876 TGCGAGGGAGCACGATCT 60.756 61.111 0.00 0.00 42.92 2.75
4025 6188 3.207669 CCATGCTTGCGAGGGAGC 61.208 66.667 2.37 0.00 39.33 4.70
4026 6189 3.207669 GCCATGCTTGCGAGGGAG 61.208 66.667 2.37 0.00 0.00 4.30
4034 6197 3.515286 CAGGAGCCGCCATGCTTG 61.515 66.667 0.00 0.00 42.95 4.01
4045 6208 1.545651 GGGTATTGGTATGGCAGGAGC 60.546 57.143 0.00 0.00 41.10 4.70
4046 6209 1.073923 GGGGTATTGGTATGGCAGGAG 59.926 57.143 0.00 0.00 0.00 3.69
4047 6210 1.145571 GGGGTATTGGTATGGCAGGA 58.854 55.000 0.00 0.00 0.00 3.86
4048 6211 0.250727 CGGGGTATTGGTATGGCAGG 60.251 60.000 0.00 0.00 0.00 4.85
4049 6212 0.762418 TCGGGGTATTGGTATGGCAG 59.238 55.000 0.00 0.00 0.00 4.85
4050 6213 1.440618 ATCGGGGTATTGGTATGGCA 58.559 50.000 0.00 0.00 0.00 4.92
4051 6214 2.159382 CAATCGGGGTATTGGTATGGC 58.841 52.381 0.00 0.00 33.95 4.40
4052 6215 3.502123 ACAATCGGGGTATTGGTATGG 57.498 47.619 0.00 0.00 40.48 2.74
4053 6216 5.845391 AAAACAATCGGGGTATTGGTATG 57.155 39.130 0.00 0.00 40.48 2.39
4073 6236 4.682860 GTCATTGACGTACTCTCGGAAAAA 59.317 41.667 0.13 0.00 34.94 1.94
4074 6237 4.232221 GTCATTGACGTACTCTCGGAAAA 58.768 43.478 0.13 0.00 34.94 2.29
4075 6238 3.829948 GTCATTGACGTACTCTCGGAAA 58.170 45.455 0.13 0.00 34.94 3.13
4076 6239 3.482722 GTCATTGACGTACTCTCGGAA 57.517 47.619 0.13 0.00 34.94 4.30
4120 6283 8.726988 TGCTACACTTCTTGTAAATATGTTTCC 58.273 33.333 0.00 0.00 40.33 3.13
4128 6295 7.862372 CACATTTGTGCTACACTTCTTGTAAAT 59.138 33.333 0.00 0.00 37.39 1.40
4131 6298 6.052360 TCACATTTGTGCTACACTTCTTGTA 58.948 36.000 5.81 0.00 45.25 2.41
4153 6320 0.601576 CGTGGACACCCGAATGTTCA 60.602 55.000 0.00 0.00 35.63 3.18
4165 6332 0.602638 GAGTTGGTGCATCGTGGACA 60.603 55.000 10.63 0.00 40.73 4.02
4167 6334 1.003839 GGAGTTGGTGCATCGTGGA 60.004 57.895 0.00 0.00 0.00 4.02
4186 6353 9.833182 GCAGTTTTCCTTCTTATTTTCTTCTAG 57.167 33.333 0.00 0.00 0.00 2.43
4187 6354 8.793592 GGCAGTTTTCCTTCTTATTTTCTTCTA 58.206 33.333 0.00 0.00 0.00 2.10
4188 6355 7.255977 GGGCAGTTTTCCTTCTTATTTTCTTCT 60.256 37.037 0.00 0.00 0.00 2.85
4189 6356 6.868864 GGGCAGTTTTCCTTCTTATTTTCTTC 59.131 38.462 0.00 0.00 0.00 2.87
4190 6357 6.239600 GGGGCAGTTTTCCTTCTTATTTTCTT 60.240 38.462 0.00 0.00 0.00 2.52
4191 6358 5.246203 GGGGCAGTTTTCCTTCTTATTTTCT 59.754 40.000 0.00 0.00 0.00 2.52
4192 6359 5.479306 GGGGCAGTTTTCCTTCTTATTTTC 58.521 41.667 0.00 0.00 0.00 2.29
4193 6360 4.286032 GGGGGCAGTTTTCCTTCTTATTTT 59.714 41.667 0.00 0.00 0.00 1.82
4194 6361 3.838317 GGGGGCAGTTTTCCTTCTTATTT 59.162 43.478 0.00 0.00 0.00 1.40
4195 6362 3.441101 GGGGGCAGTTTTCCTTCTTATT 58.559 45.455 0.00 0.00 0.00 1.40
4196 6363 2.620627 CGGGGGCAGTTTTCCTTCTTAT 60.621 50.000 0.00 0.00 0.00 1.73
4197 6364 1.271707 CGGGGGCAGTTTTCCTTCTTA 60.272 52.381 0.00 0.00 0.00 2.10
4198 6365 0.539669 CGGGGGCAGTTTTCCTTCTT 60.540 55.000 0.00 0.00 0.00 2.52
4199 6366 1.074951 CGGGGGCAGTTTTCCTTCT 59.925 57.895 0.00 0.00 0.00 2.85
4200 6367 2.636412 GCGGGGGCAGTTTTCCTTC 61.636 63.158 0.00 0.00 0.00 3.46
4201 6368 2.600470 GCGGGGGCAGTTTTCCTT 60.600 61.111 0.00 0.00 0.00 3.36
4204 6371 3.733960 GACGCGGGGGCAGTTTTC 61.734 66.667 12.47 0.00 0.00 2.29
4228 6395 4.838486 GTCGCTCGAGTCGCCCAG 62.838 72.222 19.83 1.04 0.00 4.45
4242 6409 1.683790 AAAAAGCGGATCGAGCGTCG 61.684 55.000 0.00 0.00 42.10 5.12
4243 6410 0.025128 GAAAAAGCGGATCGAGCGTC 59.975 55.000 0.00 0.00 40.04 5.19
4244 6411 1.359459 GGAAAAAGCGGATCGAGCGT 61.359 55.000 0.00 0.92 40.04 5.07
4245 6412 1.348594 GGAAAAAGCGGATCGAGCG 59.651 57.895 0.00 0.00 40.04 5.03
4246 6413 1.348594 CGGAAAAAGCGGATCGAGC 59.651 57.895 0.00 0.00 0.00 5.03
4247 6414 0.739813 ACCGGAAAAAGCGGATCGAG 60.740 55.000 9.46 0.00 0.00 4.04
4248 6415 1.017177 CACCGGAAAAAGCGGATCGA 61.017 55.000 9.46 0.00 0.00 3.59
4249 6416 1.296056 ACACCGGAAAAAGCGGATCG 61.296 55.000 9.46 0.00 0.00 3.69
4250 6417 0.446616 GACACCGGAAAAAGCGGATC 59.553 55.000 9.46 0.00 0.00 3.36
4251 6418 1.296056 CGACACCGGAAAAAGCGGAT 61.296 55.000 9.46 0.00 0.00 4.18
4252 6419 1.957186 CGACACCGGAAAAAGCGGA 60.957 57.895 9.46 0.00 0.00 5.54
4253 6420 2.166584 GACGACACCGGAAAAAGCGG 62.167 60.000 9.46 0.00 40.78 5.52
4254 6421 1.203313 GACGACACCGGAAAAAGCG 59.797 57.895 9.46 5.37 40.78 4.68
4255 6422 1.572941 GGACGACACCGGAAAAAGC 59.427 57.895 9.46 0.00 40.78 3.51
4256 6423 0.250166 AGGGACGACACCGGAAAAAG 60.250 55.000 9.46 0.00 40.78 2.27
4257 6424 0.533308 CAGGGACGACACCGGAAAAA 60.533 55.000 9.46 0.00 40.78 1.94
4258 6425 1.070105 CAGGGACGACACCGGAAAA 59.930 57.895 9.46 0.00 40.78 2.29
4259 6426 2.135581 ACAGGGACGACACCGGAAA 61.136 57.895 9.46 0.00 40.78 3.13
4260 6427 2.522436 ACAGGGACGACACCGGAA 60.522 61.111 9.46 0.00 40.78 4.30
4261 6428 3.299977 CACAGGGACGACACCGGA 61.300 66.667 9.46 0.00 40.78 5.14
4267 6434 4.681978 AAGGCGCACAGGGACGAC 62.682 66.667 10.83 0.00 37.66 4.34
4268 6435 4.373116 GAAGGCGCACAGGGACGA 62.373 66.667 10.83 0.00 0.00 4.20
4273 6440 4.785453 GAGGGGAAGGCGCACAGG 62.785 72.222 10.83 0.00 0.00 4.00
4298 6465 4.508128 CCCGATGACACCGACCGG 62.508 72.222 6.94 6.94 39.85 5.28
4300 6467 4.832608 GGCCCGATGACACCGACC 62.833 72.222 0.00 0.00 0.00 4.79
4301 6468 3.310860 AAGGCCCGATGACACCGAC 62.311 63.158 0.00 0.00 0.00 4.79
4302 6469 3.000819 AAGGCCCGATGACACCGA 61.001 61.111 0.00 0.00 0.00 4.69
4303 6470 2.819595 CAAGGCCCGATGACACCG 60.820 66.667 0.00 0.00 0.00 4.94
4304 6471 3.134127 GCAAGGCCCGATGACACC 61.134 66.667 0.00 0.00 0.00 4.16
4305 6472 3.134127 GGCAAGGCCCGATGACAC 61.134 66.667 0.00 0.00 44.06 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.