Multiple sequence alignment - TraesCS3A01G503900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G503900 chr3A 100.000 2231 0 0 1 2231 726328675 726330905 0.000000e+00 4120.0
1 TraesCS3A01G503900 chr3A 82.409 631 101 7 500 1129 726304564 726305185 1.950000e-150 542.0
2 TraesCS3A01G503900 chr3A 81.328 241 34 7 1443 1673 726313028 726313267 3.780000e-43 185.0
3 TraesCS3A01G503900 chr3A 96.341 82 3 0 1220 1301 726329854 726329935 3.860000e-28 135.0
4 TraesCS3A01G503900 chr3A 96.341 82 3 0 1180 1261 726329894 726329975 3.860000e-28 135.0
5 TraesCS3A01G503900 chr3D 91.129 992 54 8 1220 2179 595271452 595272441 0.000000e+00 1314.0
6 TraesCS3A01G503900 chr3D 95.151 763 33 3 500 1261 595270774 595271533 0.000000e+00 1201.0
7 TraesCS3A01G503900 chr3D 83.968 630 92 6 500 1129 595240236 595240856 1.470000e-166 595.0
8 TraesCS3A01G503900 chr4A 93.805 452 27 1 57 507 737172846 737173297 0.000000e+00 678.0
9 TraesCS3A01G503900 chr4A 87.273 55 6 1 2176 2229 689081574 689081628 6.650000e-06 62.1
10 TraesCS3A01G503900 chr1B 93.519 108 6 1 569 676 144798833 144798727 2.290000e-35 159.0
11 TraesCS3A01G503900 chr5A 84.118 170 13 8 35 203 667983442 667983598 3.840000e-33 152.0
12 TraesCS3A01G503900 chr1D 89.344 122 12 1 83 204 4993177 4993057 3.840000e-33 152.0
13 TraesCS3A01G503900 chr1D 83.019 159 22 3 5 160 4993407 4993251 2.990000e-29 139.0
14 TraesCS3A01G503900 chr1D 77.326 172 21 6 83 236 470571909 470571738 3.950000e-13 86.1
15 TraesCS3A01G503900 chr1D 82.609 69 9 3 35 102 4993353 4993287 8.610000e-05 58.4
16 TraesCS3A01G503900 chr2D 87.705 122 14 1 83 204 580633319 580633439 8.310000e-30 141.0
17 TraesCS3A01G503900 chr2D 90.909 66 6 0 2 67 580633052 580633117 3.050000e-14 89.8
18 TraesCS3A01G503900 chr6B 80.303 198 28 8 302 495 300676371 300676561 2.990000e-29 139.0
19 TraesCS3A01G503900 chr6A 79.882 169 19 8 5 159 183196403 183196236 2.340000e-20 110.0
20 TraesCS3A01G503900 chr7A 81.720 93 11 2 150 236 195522806 195522714 3.070000e-09 73.1
21 TraesCS3A01G503900 chr7A 84.483 58 7 1 2176 2231 33371466 33371409 3.090000e-04 56.5
22 TraesCS3A01G503900 chr7D 86.441 59 5 2 2172 2228 588838661 588838604 6.650000e-06 62.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G503900 chr3A 726328675 726330905 2230 False 1463.333333 4120 97.560667 1 2231 3 chr3A.!!$F3 2230
1 TraesCS3A01G503900 chr3A 726304564 726305185 621 False 542.000000 542 82.409000 500 1129 1 chr3A.!!$F1 629
2 TraesCS3A01G503900 chr3D 595270774 595272441 1667 False 1257.500000 1314 93.140000 500 2179 2 chr3D.!!$F2 1679
3 TraesCS3A01G503900 chr3D 595240236 595240856 620 False 595.000000 595 83.968000 500 1129 1 chr3D.!!$F1 629

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
402 403 0.110486 GGCAGAAAGAACAGGGGACA 59.89 55.0 0.0 0.0 0.0 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1774 1807 0.466124 AATCAGGCCTCGGCTAACTC 59.534 55.0 0.0 0.0 41.6 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
47 48 6.237313 GTGGAACTACAGTGGAATTTACAC 57.763 41.667 3.38 3.38 39.10 2.90
69 70 8.986477 ACACTGTAAATCTTAATGGATTTTGC 57.014 30.769 7.70 3.99 41.42 3.68
70 71 8.806146 ACACTGTAAATCTTAATGGATTTTGCT 58.194 29.630 7.70 0.00 41.42 3.91
71 72 9.294030 CACTGTAAATCTTAATGGATTTTGCTC 57.706 33.333 7.70 0.74 41.42 4.26
72 73 9.247861 ACTGTAAATCTTAATGGATTTTGCTCT 57.752 29.630 7.70 0.00 41.42 4.09
73 74 9.512435 CTGTAAATCTTAATGGATTTTGCTCTG 57.488 33.333 7.70 0.85 41.42 3.35
74 75 9.023962 TGTAAATCTTAATGGATTTTGCTCTGT 57.976 29.630 7.70 0.00 41.42 3.41
80 81 7.975616 TCTTAATGGATTTTGCTCTGTATTTGC 59.024 33.333 0.00 0.00 0.00 3.68
81 82 5.664294 ATGGATTTTGCTCTGTATTTGCA 57.336 34.783 0.00 0.00 34.69 4.08
82 83 5.465532 TGGATTTTGCTCTGTATTTGCAA 57.534 34.783 0.00 0.00 43.69 4.08
83 84 5.472148 TGGATTTTGCTCTGTATTTGCAAG 58.528 37.500 0.00 0.00 45.52 4.01
84 85 5.010922 TGGATTTTGCTCTGTATTTGCAAGT 59.989 36.000 0.00 0.00 45.52 3.16
85 86 5.346822 GGATTTTGCTCTGTATTTGCAAGTG 59.653 40.000 4.47 0.00 45.52 3.16
86 87 3.921119 TTGCTCTGTATTTGCAAGTGG 57.079 42.857 4.47 0.00 41.06 4.00
87 88 3.138884 TGCTCTGTATTTGCAAGTGGA 57.861 42.857 4.47 0.11 33.48 4.02
88 89 3.485394 TGCTCTGTATTTGCAAGTGGAA 58.515 40.909 4.47 0.00 33.48 3.53
89 90 4.081406 TGCTCTGTATTTGCAAGTGGAAT 58.919 39.130 4.47 0.00 33.48 3.01
90 91 4.523943 TGCTCTGTATTTGCAAGTGGAATT 59.476 37.500 4.47 0.00 33.48 2.17
91 92 5.709631 TGCTCTGTATTTGCAAGTGGAATTA 59.290 36.000 4.47 0.00 33.48 1.40
92 93 6.377996 TGCTCTGTATTTGCAAGTGGAATTAT 59.622 34.615 4.47 0.00 33.48 1.28
93 94 7.555914 TGCTCTGTATTTGCAAGTGGAATTATA 59.444 33.333 4.47 0.00 33.48 0.98
94 95 8.072567 GCTCTGTATTTGCAAGTGGAATTATAG 58.927 37.037 4.47 5.46 0.00 1.31
95 96 9.113838 CTCTGTATTTGCAAGTGGAATTATAGT 57.886 33.333 4.47 0.00 29.57 2.12
96 97 8.892723 TCTGTATTTGCAAGTGGAATTATAGTG 58.107 33.333 4.47 0.00 29.57 2.74
97 98 8.574251 TGTATTTGCAAGTGGAATTATAGTGT 57.426 30.769 4.47 0.00 0.00 3.55
98 99 9.674068 TGTATTTGCAAGTGGAATTATAGTGTA 57.326 29.630 4.47 0.00 0.00 2.90
104 105 9.853555 TGCAAGTGGAATTATAGTGTATTTTTG 57.146 29.630 0.00 0.00 0.00 2.44
105 106 9.301153 GCAAGTGGAATTATAGTGTATTTTTGG 57.699 33.333 0.00 0.00 0.00 3.28
108 109 8.966868 AGTGGAATTATAGTGTATTTTTGGTGG 58.033 33.333 0.00 0.00 0.00 4.61
109 110 8.962679 GTGGAATTATAGTGTATTTTTGGTGGA 58.037 33.333 0.00 0.00 0.00 4.02
110 111 9.535170 TGGAATTATAGTGTATTTTTGGTGGAA 57.465 29.630 0.00 0.00 0.00 3.53
117 118 7.833285 AGTGTATTTTTGGTGGAATTACTGT 57.167 32.000 0.00 0.00 0.00 3.55
118 119 7.657336 AGTGTATTTTTGGTGGAATTACTGTG 58.343 34.615 0.00 0.00 0.00 3.66
119 120 6.364976 GTGTATTTTTGGTGGAATTACTGTGC 59.635 38.462 0.00 0.00 0.00 4.57
120 121 5.543507 ATTTTTGGTGGAATTACTGTGCA 57.456 34.783 0.00 0.00 0.00 4.57
121 122 5.543507 TTTTTGGTGGAATTACTGTGCAT 57.456 34.783 0.00 0.00 0.00 3.96
122 123 5.543507 TTTTGGTGGAATTACTGTGCATT 57.456 34.783 0.00 0.00 0.00 3.56
123 124 5.543507 TTTGGTGGAATTACTGTGCATTT 57.456 34.783 0.00 0.00 0.00 2.32
124 125 5.543507 TTGGTGGAATTACTGTGCATTTT 57.456 34.783 0.00 0.00 0.00 1.82
125 126 5.132897 TGGTGGAATTACTGTGCATTTTC 57.867 39.130 0.00 0.00 0.00 2.29
126 127 4.021544 TGGTGGAATTACTGTGCATTTTCC 60.022 41.667 0.00 0.00 34.54 3.13
127 128 4.165779 GTGGAATTACTGTGCATTTTCCG 58.834 43.478 0.00 0.00 36.30 4.30
128 129 3.823873 TGGAATTACTGTGCATTTTCCGT 59.176 39.130 0.00 0.00 36.30 4.69
129 130 4.165779 GGAATTACTGTGCATTTTCCGTG 58.834 43.478 0.00 0.00 0.00 4.94
130 131 3.848272 ATTACTGTGCATTTTCCGTGG 57.152 42.857 0.00 0.00 0.00 4.94
131 132 2.264005 TACTGTGCATTTTCCGTGGT 57.736 45.000 0.00 0.00 0.00 4.16
132 133 1.398692 ACTGTGCATTTTCCGTGGTT 58.601 45.000 0.00 0.00 0.00 3.67
133 134 1.754226 ACTGTGCATTTTCCGTGGTTT 59.246 42.857 0.00 0.00 0.00 3.27
134 135 2.167487 ACTGTGCATTTTCCGTGGTTTT 59.833 40.909 0.00 0.00 0.00 2.43
135 136 3.194062 CTGTGCATTTTCCGTGGTTTTT 58.806 40.909 0.00 0.00 0.00 1.94
136 137 4.142138 ACTGTGCATTTTCCGTGGTTTTTA 60.142 37.500 0.00 0.00 0.00 1.52
137 138 4.113354 TGTGCATTTTCCGTGGTTTTTAC 58.887 39.130 0.00 0.00 0.00 2.01
138 139 4.113354 GTGCATTTTCCGTGGTTTTTACA 58.887 39.130 0.00 0.00 0.00 2.41
139 140 4.026393 GTGCATTTTCCGTGGTTTTTACAC 60.026 41.667 0.00 0.00 35.55 2.90
140 141 4.142138 TGCATTTTCCGTGGTTTTTACACT 60.142 37.500 0.00 0.00 36.71 3.55
141 142 4.208253 GCATTTTCCGTGGTTTTTACACTG 59.792 41.667 0.00 0.00 36.71 3.66
142 143 5.344884 CATTTTCCGTGGTTTTTACACTGT 58.655 37.500 0.00 0.00 36.71 3.55
143 144 6.496571 CATTTTCCGTGGTTTTTACACTGTA 58.503 36.000 0.00 0.00 36.71 2.74
144 145 6.506500 TTTTCCGTGGTTTTTACACTGTAA 57.493 33.333 0.00 0.00 36.71 2.41
145 146 6.696441 TTTCCGTGGTTTTTACACTGTAAT 57.304 33.333 2.41 0.00 36.71 1.89
146 147 6.696441 TTCCGTGGTTTTTACACTGTAATT 57.304 33.333 2.41 0.00 36.71 1.40
147 148 7.798596 TTCCGTGGTTTTTACACTGTAATTA 57.201 32.000 2.41 0.00 36.71 1.40
148 149 7.188468 TCCGTGGTTTTTACACTGTAATTAC 57.812 36.000 8.75 8.75 36.71 1.89
149 150 6.991531 TCCGTGGTTTTTACACTGTAATTACT 59.008 34.615 16.33 0.00 36.71 2.24
150 151 8.147058 TCCGTGGTTTTTACACTGTAATTACTA 58.853 33.333 16.33 2.90 36.71 1.82
151 152 8.437742 CCGTGGTTTTTACACTGTAATTACTAG 58.562 37.037 16.33 13.42 36.71 2.57
152 153 8.981647 CGTGGTTTTTACACTGTAATTACTAGT 58.018 33.333 16.33 13.98 36.71 2.57
170 171 9.749340 ATTACTAGTGTAATTTTAGCCCTTTGT 57.251 29.630 5.39 0.00 44.35 2.83
184 185 8.815565 TTAGCCCTTTGTATAATTGATTCACA 57.184 30.769 0.00 0.00 0.00 3.58
185 186 7.338800 AGCCCTTTGTATAATTGATTCACAG 57.661 36.000 0.00 0.00 0.00 3.66
186 187 5.979517 GCCCTTTGTATAATTGATTCACAGC 59.020 40.000 0.00 0.00 0.00 4.40
187 188 6.405731 GCCCTTTGTATAATTGATTCACAGCA 60.406 38.462 0.00 0.00 0.00 4.41
188 189 7.198390 CCCTTTGTATAATTGATTCACAGCAG 58.802 38.462 0.00 0.00 0.00 4.24
189 190 6.694411 CCTTTGTATAATTGATTCACAGCAGC 59.306 38.462 0.00 0.00 0.00 5.25
190 191 6.756299 TTGTATAATTGATTCACAGCAGCA 57.244 33.333 0.00 0.00 0.00 4.41
191 192 6.367686 TGTATAATTGATTCACAGCAGCAG 57.632 37.500 0.00 0.00 0.00 4.24
192 193 2.649331 AATTGATTCACAGCAGCAGC 57.351 45.000 0.00 0.00 42.56 5.25
193 194 1.541379 ATTGATTCACAGCAGCAGCA 58.459 45.000 3.17 0.00 45.49 4.41
194 195 0.879090 TTGATTCACAGCAGCAGCAG 59.121 50.000 3.17 0.00 45.49 4.24
195 196 1.136984 GATTCACAGCAGCAGCAGC 59.863 57.895 3.17 0.46 45.49 5.25
207 208 2.458592 GCAGCAGCGGTAATTTAGTG 57.541 50.000 0.00 0.00 0.00 2.74
208 209 1.737793 GCAGCAGCGGTAATTTAGTGT 59.262 47.619 0.00 0.00 0.00 3.55
209 210 2.476185 GCAGCAGCGGTAATTTAGTGTG 60.476 50.000 0.00 0.00 0.00 3.82
210 211 2.095853 CAGCAGCGGTAATTTAGTGTGG 59.904 50.000 0.00 0.00 0.00 4.17
211 212 2.081462 GCAGCGGTAATTTAGTGTGGT 58.919 47.619 0.00 0.00 0.00 4.16
212 213 2.486592 GCAGCGGTAATTTAGTGTGGTT 59.513 45.455 0.00 0.00 0.00 3.67
213 214 3.685756 GCAGCGGTAATTTAGTGTGGTTA 59.314 43.478 0.00 0.00 0.00 2.85
214 215 4.201783 GCAGCGGTAATTTAGTGTGGTTAG 60.202 45.833 0.00 0.00 0.00 2.34
215 216 5.172934 CAGCGGTAATTTAGTGTGGTTAGA 58.827 41.667 0.00 0.00 0.00 2.10
216 217 5.815740 CAGCGGTAATTTAGTGTGGTTAGAT 59.184 40.000 0.00 0.00 0.00 1.98
217 218 5.815740 AGCGGTAATTTAGTGTGGTTAGATG 59.184 40.000 0.00 0.00 0.00 2.90
218 219 5.583457 GCGGTAATTTAGTGTGGTTAGATGT 59.417 40.000 0.00 0.00 0.00 3.06
219 220 6.238022 GCGGTAATTTAGTGTGGTTAGATGTC 60.238 42.308 0.00 0.00 0.00 3.06
220 221 6.814644 CGGTAATTTAGTGTGGTTAGATGTCA 59.185 38.462 0.00 0.00 0.00 3.58
221 222 7.494625 CGGTAATTTAGTGTGGTTAGATGTCAT 59.505 37.037 0.00 0.00 0.00 3.06
222 223 8.827677 GGTAATTTAGTGTGGTTAGATGTCATC 58.172 37.037 4.52 4.52 0.00 2.92
223 224 9.378551 GTAATTTAGTGTGGTTAGATGTCATCA 57.621 33.333 15.20 0.00 0.00 3.07
224 225 8.498054 AATTTAGTGTGGTTAGATGTCATCAG 57.502 34.615 15.20 0.00 0.00 2.90
225 226 6.605471 TTAGTGTGGTTAGATGTCATCAGT 57.395 37.500 15.20 0.00 0.00 3.41
226 227 5.489792 AGTGTGGTTAGATGTCATCAGTT 57.510 39.130 15.20 0.00 0.00 3.16
227 228 5.869579 AGTGTGGTTAGATGTCATCAGTTT 58.130 37.500 15.20 0.00 0.00 2.66
228 229 6.299141 AGTGTGGTTAGATGTCATCAGTTTT 58.701 36.000 15.20 0.00 0.00 2.43
229 230 6.205464 AGTGTGGTTAGATGTCATCAGTTTTG 59.795 38.462 15.20 0.00 0.00 2.44
230 231 5.473162 TGTGGTTAGATGTCATCAGTTTTGG 59.527 40.000 15.20 0.00 0.00 3.28
231 232 5.473504 GTGGTTAGATGTCATCAGTTTTGGT 59.526 40.000 15.20 0.00 0.00 3.67
232 233 5.705441 TGGTTAGATGTCATCAGTTTTGGTC 59.295 40.000 15.20 0.00 0.00 4.02
233 234 5.123979 GGTTAGATGTCATCAGTTTTGGTCC 59.876 44.000 15.20 1.40 0.00 4.46
234 235 4.647564 AGATGTCATCAGTTTTGGTCCT 57.352 40.909 15.20 0.00 0.00 3.85
235 236 4.990526 AGATGTCATCAGTTTTGGTCCTT 58.009 39.130 15.20 0.00 0.00 3.36
236 237 5.388654 AGATGTCATCAGTTTTGGTCCTTT 58.611 37.500 15.20 0.00 0.00 3.11
237 238 5.835280 AGATGTCATCAGTTTTGGTCCTTTT 59.165 36.000 15.20 0.00 0.00 2.27
238 239 5.514274 TGTCATCAGTTTTGGTCCTTTTC 57.486 39.130 0.00 0.00 0.00 2.29
239 240 4.340950 TGTCATCAGTTTTGGTCCTTTTCC 59.659 41.667 0.00 0.00 0.00 3.13
240 241 4.584743 GTCATCAGTTTTGGTCCTTTTCCT 59.415 41.667 0.00 0.00 0.00 3.36
241 242 4.827284 TCATCAGTTTTGGTCCTTTTCCTC 59.173 41.667 0.00 0.00 0.00 3.71
242 243 3.562182 TCAGTTTTGGTCCTTTTCCTCC 58.438 45.455 0.00 0.00 0.00 4.30
243 244 3.204382 TCAGTTTTGGTCCTTTTCCTCCT 59.796 43.478 0.00 0.00 0.00 3.69
244 245 3.570125 CAGTTTTGGTCCTTTTCCTCCTC 59.430 47.826 0.00 0.00 0.00 3.71
245 246 2.552743 GTTTTGGTCCTTTTCCTCCTCG 59.447 50.000 0.00 0.00 0.00 4.63
246 247 1.430992 TTGGTCCTTTTCCTCCTCGT 58.569 50.000 0.00 0.00 0.00 4.18
247 248 0.685097 TGGTCCTTTTCCTCCTCGTG 59.315 55.000 0.00 0.00 0.00 4.35
248 249 0.685660 GGTCCTTTTCCTCCTCGTGT 59.314 55.000 0.00 0.00 0.00 4.49
249 250 1.897802 GGTCCTTTTCCTCCTCGTGTA 59.102 52.381 0.00 0.00 0.00 2.90
250 251 2.094130 GGTCCTTTTCCTCCTCGTGTAG 60.094 54.545 0.00 0.00 0.00 2.74
251 252 2.561858 GTCCTTTTCCTCCTCGTGTAGT 59.438 50.000 0.00 0.00 0.00 2.73
252 253 3.006644 GTCCTTTTCCTCCTCGTGTAGTT 59.993 47.826 0.00 0.00 0.00 2.24
253 254 4.219288 GTCCTTTTCCTCCTCGTGTAGTTA 59.781 45.833 0.00 0.00 0.00 2.24
254 255 4.219288 TCCTTTTCCTCCTCGTGTAGTTAC 59.781 45.833 0.00 0.00 0.00 2.50
255 256 4.492611 CTTTTCCTCCTCGTGTAGTTACC 58.507 47.826 0.00 0.00 0.00 2.85
256 257 3.446442 TTCCTCCTCGTGTAGTTACCT 57.554 47.619 0.00 0.00 0.00 3.08
257 258 3.446442 TCCTCCTCGTGTAGTTACCTT 57.554 47.619 0.00 0.00 0.00 3.50
258 259 3.087031 TCCTCCTCGTGTAGTTACCTTG 58.913 50.000 0.00 0.00 0.00 3.61
259 260 2.165845 CCTCCTCGTGTAGTTACCTTGG 59.834 54.545 0.00 0.00 0.00 3.61
260 261 2.824341 CTCCTCGTGTAGTTACCTTGGT 59.176 50.000 0.00 0.00 0.00 3.67
261 262 2.821969 TCCTCGTGTAGTTACCTTGGTC 59.178 50.000 0.00 0.00 0.00 4.02
262 263 2.094338 CCTCGTGTAGTTACCTTGGTCC 60.094 54.545 0.00 0.00 0.00 4.46
263 264 2.559668 CTCGTGTAGTTACCTTGGTCCA 59.440 50.000 0.00 0.00 0.00 4.02
264 265 2.297033 TCGTGTAGTTACCTTGGTCCAC 59.703 50.000 0.00 0.00 0.00 4.02
265 266 2.611224 CGTGTAGTTACCTTGGTCCACC 60.611 54.545 0.00 0.00 0.00 4.61
266 267 2.636403 GTGTAGTTACCTTGGTCCACCT 59.364 50.000 0.00 0.00 36.82 4.00
267 268 3.072038 GTGTAGTTACCTTGGTCCACCTT 59.928 47.826 0.00 0.00 36.82 3.50
268 269 3.717913 TGTAGTTACCTTGGTCCACCTTT 59.282 43.478 0.00 0.00 36.82 3.11
269 270 3.965470 AGTTACCTTGGTCCACCTTTT 57.035 42.857 0.00 0.00 36.82 2.27
270 271 3.562182 AGTTACCTTGGTCCACCTTTTG 58.438 45.455 0.00 0.00 36.82 2.44
271 272 3.053170 AGTTACCTTGGTCCACCTTTTGT 60.053 43.478 0.00 0.00 36.82 2.83
272 273 2.543037 ACCTTGGTCCACCTTTTGTT 57.457 45.000 0.00 0.00 36.82 2.83
273 274 3.673543 ACCTTGGTCCACCTTTTGTTA 57.326 42.857 0.00 0.00 36.82 2.41
274 275 3.562182 ACCTTGGTCCACCTTTTGTTAG 58.438 45.455 0.00 0.00 36.82 2.34
275 276 3.053170 ACCTTGGTCCACCTTTTGTTAGT 60.053 43.478 0.00 0.00 36.82 2.24
276 277 3.958147 CCTTGGTCCACCTTTTGTTAGTT 59.042 43.478 0.00 0.00 36.82 2.24
277 278 4.404394 CCTTGGTCCACCTTTTGTTAGTTT 59.596 41.667 0.00 0.00 36.82 2.66
278 279 5.105106 CCTTGGTCCACCTTTTGTTAGTTTT 60.105 40.000 0.00 0.00 36.82 2.43
279 280 6.361768 TTGGTCCACCTTTTGTTAGTTTTT 57.638 33.333 0.00 0.00 36.82 1.94
280 281 7.363968 CCTTGGTCCACCTTTTGTTAGTTTTTA 60.364 37.037 0.00 0.00 36.82 1.52
281 282 7.477945 TGGTCCACCTTTTGTTAGTTTTTAA 57.522 32.000 0.00 0.00 36.82 1.52
282 283 7.321908 TGGTCCACCTTTTGTTAGTTTTTAAC 58.678 34.615 0.00 0.00 36.82 2.01
283 284 6.757947 GGTCCACCTTTTGTTAGTTTTTAACC 59.242 38.462 0.00 0.00 0.00 2.85
284 285 6.757947 GTCCACCTTTTGTTAGTTTTTAACCC 59.242 38.462 0.00 0.00 0.00 4.11
285 286 5.749588 CCACCTTTTGTTAGTTTTTAACCCG 59.250 40.000 0.00 0.00 0.00 5.28
286 287 6.331845 CACCTTTTGTTAGTTTTTAACCCGT 58.668 36.000 0.00 0.00 0.00 5.28
287 288 6.812656 CACCTTTTGTTAGTTTTTAACCCGTT 59.187 34.615 0.00 0.00 0.00 4.44
288 289 7.331440 CACCTTTTGTTAGTTTTTAACCCGTTT 59.669 33.333 0.00 0.00 0.00 3.60
289 290 8.526978 ACCTTTTGTTAGTTTTTAACCCGTTTA 58.473 29.630 0.00 0.00 0.00 2.01
290 291 9.022915 CCTTTTGTTAGTTTTTAACCCGTTTAG 57.977 33.333 0.00 0.00 0.00 1.85
291 292 7.984002 TTTGTTAGTTTTTAACCCGTTTAGC 57.016 32.000 0.00 0.00 0.00 3.09
292 293 6.940831 TGTTAGTTTTTAACCCGTTTAGCT 57.059 33.333 0.00 0.00 0.00 3.32
293 294 6.727215 TGTTAGTTTTTAACCCGTTTAGCTG 58.273 36.000 0.00 0.00 0.00 4.24
294 295 6.541641 TGTTAGTTTTTAACCCGTTTAGCTGA 59.458 34.615 0.00 0.00 0.00 4.26
295 296 7.229106 TGTTAGTTTTTAACCCGTTTAGCTGAT 59.771 33.333 0.00 0.00 0.00 2.90
296 297 6.644248 AGTTTTTAACCCGTTTAGCTGATT 57.356 33.333 0.00 0.00 0.00 2.57
297 298 7.046292 AGTTTTTAACCCGTTTAGCTGATTT 57.954 32.000 0.00 0.00 0.00 2.17
298 299 8.168790 AGTTTTTAACCCGTTTAGCTGATTTA 57.831 30.769 0.00 0.00 0.00 1.40
299 300 8.799367 AGTTTTTAACCCGTTTAGCTGATTTAT 58.201 29.630 0.00 0.00 0.00 1.40
303 304 8.967664 TTAACCCGTTTAGCTGATTTATATGT 57.032 30.769 0.00 0.00 0.00 2.29
305 306 7.958053 ACCCGTTTAGCTGATTTATATGTAC 57.042 36.000 0.00 0.00 0.00 2.90
306 307 6.643770 ACCCGTTTAGCTGATTTATATGTACG 59.356 38.462 0.00 0.00 0.00 3.67
307 308 6.090358 CCCGTTTAGCTGATTTATATGTACGG 59.910 42.308 0.00 0.00 42.22 4.02
308 309 6.090358 CCGTTTAGCTGATTTATATGTACGGG 59.910 42.308 0.00 0.00 39.76 5.28
309 310 6.643770 CGTTTAGCTGATTTATATGTACGGGT 59.356 38.462 0.00 0.00 0.00 5.28
310 311 7.170320 CGTTTAGCTGATTTATATGTACGGGTT 59.830 37.037 0.00 0.00 0.00 4.11
311 312 8.833493 GTTTAGCTGATTTATATGTACGGGTTT 58.167 33.333 0.00 0.00 0.00 3.27
312 313 6.861065 AGCTGATTTATATGTACGGGTTTG 57.139 37.500 0.00 0.00 0.00 2.93
313 314 6.588204 AGCTGATTTATATGTACGGGTTTGA 58.412 36.000 0.00 0.00 0.00 2.69
314 315 7.051623 AGCTGATTTATATGTACGGGTTTGAA 58.948 34.615 0.00 0.00 0.00 2.69
315 316 7.719633 AGCTGATTTATATGTACGGGTTTGAAT 59.280 33.333 0.00 0.00 0.00 2.57
316 317 8.995220 GCTGATTTATATGTACGGGTTTGAATA 58.005 33.333 0.00 0.00 0.00 1.75
322 323 9.887629 TTATATGTACGGGTTTGAATAGTTTGA 57.112 29.630 0.00 0.00 0.00 2.69
323 324 8.974060 ATATGTACGGGTTTGAATAGTTTGAT 57.026 30.769 0.00 0.00 0.00 2.57
324 325 6.489127 TGTACGGGTTTGAATAGTTTGATG 57.511 37.500 0.00 0.00 0.00 3.07
325 326 5.998981 TGTACGGGTTTGAATAGTTTGATGT 59.001 36.000 0.00 0.00 0.00 3.06
326 327 7.160049 TGTACGGGTTTGAATAGTTTGATGTA 58.840 34.615 0.00 0.00 0.00 2.29
327 328 7.825270 TGTACGGGTTTGAATAGTTTGATGTAT 59.175 33.333 0.00 0.00 0.00 2.29
328 329 7.083875 ACGGGTTTGAATAGTTTGATGTATG 57.916 36.000 0.00 0.00 0.00 2.39
329 330 6.094881 ACGGGTTTGAATAGTTTGATGTATGG 59.905 38.462 0.00 0.00 0.00 2.74
330 331 6.317642 CGGGTTTGAATAGTTTGATGTATGGA 59.682 38.462 0.00 0.00 0.00 3.41
331 332 7.480810 GGGTTTGAATAGTTTGATGTATGGAC 58.519 38.462 0.00 0.00 0.00 4.02
332 333 7.416326 GGGTTTGAATAGTTTGATGTATGGACC 60.416 40.741 0.00 0.00 0.00 4.46
333 334 7.416326 GGTTTGAATAGTTTGATGTATGGACCC 60.416 40.741 0.00 0.00 0.00 4.46
334 335 5.364778 TGAATAGTTTGATGTATGGACCCG 58.635 41.667 0.00 0.00 0.00 5.28
335 336 5.104693 TGAATAGTTTGATGTATGGACCCGT 60.105 40.000 0.00 0.00 0.00 5.28
336 337 3.713826 AGTTTGATGTATGGACCCGTT 57.286 42.857 0.00 0.00 0.00 4.44
337 338 4.028993 AGTTTGATGTATGGACCCGTTT 57.971 40.909 0.00 0.00 0.00 3.60
338 339 5.168647 AGTTTGATGTATGGACCCGTTTA 57.831 39.130 0.00 0.00 0.00 2.01
339 340 5.751586 AGTTTGATGTATGGACCCGTTTAT 58.248 37.500 0.00 0.00 0.00 1.40
340 341 5.588648 AGTTTGATGTATGGACCCGTTTATG 59.411 40.000 0.00 0.00 0.00 1.90
341 342 4.079980 TGATGTATGGACCCGTTTATGG 57.920 45.455 0.00 0.00 0.00 2.74
342 343 2.335316 TGTATGGACCCGTTTATGGC 57.665 50.000 0.00 0.00 0.00 4.40
343 344 1.841277 TGTATGGACCCGTTTATGGCT 59.159 47.619 0.00 0.00 0.00 4.75
344 345 2.240160 TGTATGGACCCGTTTATGGCTT 59.760 45.455 0.00 0.00 0.00 4.35
345 346 1.762708 ATGGACCCGTTTATGGCTTG 58.237 50.000 0.00 0.00 0.00 4.01
346 347 0.963355 TGGACCCGTTTATGGCTTGC 60.963 55.000 0.00 0.00 0.00 4.01
347 348 0.679960 GGACCCGTTTATGGCTTGCT 60.680 55.000 0.00 0.00 0.00 3.91
348 349 0.451783 GACCCGTTTATGGCTTGCTG 59.548 55.000 0.00 0.00 0.00 4.41
349 350 0.251165 ACCCGTTTATGGCTTGCTGT 60.251 50.000 0.00 0.00 0.00 4.40
350 351 0.171007 CCCGTTTATGGCTTGCTGTG 59.829 55.000 0.00 0.00 0.00 3.66
351 352 0.881118 CCGTTTATGGCTTGCTGTGT 59.119 50.000 0.00 0.00 0.00 3.72
352 353 1.401409 CCGTTTATGGCTTGCTGTGTG 60.401 52.381 0.00 0.00 0.00 3.82
353 354 1.401409 CGTTTATGGCTTGCTGTGTGG 60.401 52.381 0.00 0.00 0.00 4.17
354 355 1.885887 GTTTATGGCTTGCTGTGTGGA 59.114 47.619 0.00 0.00 0.00 4.02
355 356 1.533625 TTATGGCTTGCTGTGTGGAC 58.466 50.000 0.00 0.00 0.00 4.02
356 357 0.322456 TATGGCTTGCTGTGTGGACC 60.322 55.000 0.00 0.00 0.00 4.46
357 358 2.072874 ATGGCTTGCTGTGTGGACCT 62.073 55.000 0.00 0.00 0.00 3.85
358 359 2.263741 GGCTTGCTGTGTGGACCTG 61.264 63.158 0.00 0.00 0.00 4.00
359 360 1.526917 GCTTGCTGTGTGGACCTGT 60.527 57.895 0.00 0.00 0.00 4.00
360 361 1.103398 GCTTGCTGTGTGGACCTGTT 61.103 55.000 0.00 0.00 0.00 3.16
361 362 1.392589 CTTGCTGTGTGGACCTGTTT 58.607 50.000 0.00 0.00 0.00 2.83
362 363 2.571212 CTTGCTGTGTGGACCTGTTTA 58.429 47.619 0.00 0.00 0.00 2.01
363 364 2.254546 TGCTGTGTGGACCTGTTTAG 57.745 50.000 0.00 0.00 0.00 1.85
364 365 1.765904 TGCTGTGTGGACCTGTTTAGA 59.234 47.619 0.00 0.00 0.00 2.10
365 366 2.171659 TGCTGTGTGGACCTGTTTAGAA 59.828 45.455 0.00 0.00 0.00 2.10
366 367 2.548480 GCTGTGTGGACCTGTTTAGAAC 59.452 50.000 0.00 0.00 0.00 3.01
367 368 3.139077 CTGTGTGGACCTGTTTAGAACC 58.861 50.000 0.00 0.00 0.00 3.62
368 369 2.140717 GTGTGGACCTGTTTAGAACCG 58.859 52.381 0.00 0.00 0.00 4.44
369 370 2.040939 TGTGGACCTGTTTAGAACCGA 58.959 47.619 0.00 0.00 0.00 4.69
370 371 2.635915 TGTGGACCTGTTTAGAACCGAT 59.364 45.455 0.00 0.00 0.00 4.18
371 372 3.071892 TGTGGACCTGTTTAGAACCGATT 59.928 43.478 0.00 0.00 0.00 3.34
372 373 4.070009 GTGGACCTGTTTAGAACCGATTT 58.930 43.478 0.00 0.00 0.00 2.17
373 374 4.069304 TGGACCTGTTTAGAACCGATTTG 58.931 43.478 0.00 0.00 0.00 2.32
374 375 3.119955 GGACCTGTTTAGAACCGATTTGC 60.120 47.826 0.00 0.00 0.00 3.68
375 376 3.482436 ACCTGTTTAGAACCGATTTGCA 58.518 40.909 0.00 0.00 0.00 4.08
376 377 3.502211 ACCTGTTTAGAACCGATTTGCAG 59.498 43.478 0.00 0.00 0.00 4.41
377 378 3.119849 CCTGTTTAGAACCGATTTGCAGG 60.120 47.826 0.00 0.00 35.64 4.85
378 379 3.482436 TGTTTAGAACCGATTTGCAGGT 58.518 40.909 0.00 0.00 43.68 4.00
379 380 3.252215 TGTTTAGAACCGATTTGCAGGTG 59.748 43.478 0.00 0.00 41.21 4.00
380 381 1.448985 TAGAACCGATTTGCAGGTGC 58.551 50.000 0.00 0.00 41.21 5.01
390 391 3.447040 GCAGGTGCAAGGCAGAAA 58.553 55.556 0.00 0.00 40.08 2.52
391 392 1.288127 GCAGGTGCAAGGCAGAAAG 59.712 57.895 0.00 0.00 40.08 2.62
392 393 1.174712 GCAGGTGCAAGGCAGAAAGA 61.175 55.000 0.00 0.00 40.08 2.52
393 394 1.321474 CAGGTGCAAGGCAGAAAGAA 58.679 50.000 0.00 0.00 40.08 2.52
394 395 1.000938 CAGGTGCAAGGCAGAAAGAAC 60.001 52.381 0.00 0.00 40.08 3.01
395 396 1.032014 GGTGCAAGGCAGAAAGAACA 58.968 50.000 0.00 0.00 40.08 3.18
396 397 1.000938 GGTGCAAGGCAGAAAGAACAG 60.001 52.381 0.00 0.00 40.08 3.16
397 398 1.000938 GTGCAAGGCAGAAAGAACAGG 60.001 52.381 0.00 0.00 40.08 4.00
398 399 0.600057 GCAAGGCAGAAAGAACAGGG 59.400 55.000 0.00 0.00 0.00 4.45
399 400 1.251251 CAAGGCAGAAAGAACAGGGG 58.749 55.000 0.00 0.00 0.00 4.79
400 401 1.149101 AAGGCAGAAAGAACAGGGGA 58.851 50.000 0.00 0.00 0.00 4.81
401 402 0.402121 AGGCAGAAAGAACAGGGGAC 59.598 55.000 0.00 0.00 0.00 4.46
402 403 0.110486 GGCAGAAAGAACAGGGGACA 59.890 55.000 0.00 0.00 0.00 4.02
403 404 1.239347 GCAGAAAGAACAGGGGACAC 58.761 55.000 0.00 0.00 0.00 3.67
404 405 1.512926 CAGAAAGAACAGGGGACACG 58.487 55.000 0.00 0.00 0.00 4.49
405 406 0.396811 AGAAAGAACAGGGGACACGG 59.603 55.000 0.00 0.00 0.00 4.94
406 407 0.605589 GAAAGAACAGGGGACACGGG 60.606 60.000 0.00 0.00 0.00 5.28
407 408 1.057851 AAAGAACAGGGGACACGGGA 61.058 55.000 0.00 0.00 0.00 5.14
408 409 1.765597 AAGAACAGGGGACACGGGAC 61.766 60.000 0.00 0.00 0.00 4.46
409 410 2.446994 AACAGGGGACACGGGACA 60.447 61.111 0.00 0.00 0.00 4.02
410 411 2.450479 GAACAGGGGACACGGGACAG 62.450 65.000 0.00 0.00 0.00 3.51
411 412 3.706373 CAGGGGACACGGGACAGG 61.706 72.222 0.00 0.00 0.00 4.00
412 413 4.250170 AGGGGACACGGGACAGGT 62.250 66.667 0.00 0.00 0.00 4.00
413 414 4.016706 GGGGACACGGGACAGGTG 62.017 72.222 0.00 0.00 41.15 4.00
414 415 2.920912 GGGACACGGGACAGGTGA 60.921 66.667 0.00 0.00 38.73 4.02
415 416 2.342648 GGACACGGGACAGGTGAC 59.657 66.667 0.00 0.00 38.73 3.67
416 417 2.504274 GGACACGGGACAGGTGACA 61.504 63.158 0.00 0.00 38.73 3.58
417 418 1.006102 GACACGGGACAGGTGACAG 60.006 63.158 0.00 0.00 38.73 3.51
418 419 1.745320 GACACGGGACAGGTGACAGT 61.745 60.000 0.00 0.00 38.73 3.55
419 420 1.335132 ACACGGGACAGGTGACAGTT 61.335 55.000 0.00 0.00 38.73 3.16
420 421 0.677288 CACGGGACAGGTGACAGTTA 59.323 55.000 0.00 0.00 37.60 2.24
421 422 1.275291 CACGGGACAGGTGACAGTTAT 59.725 52.381 0.00 0.00 37.60 1.89
422 423 1.549170 ACGGGACAGGTGACAGTTATC 59.451 52.381 0.00 0.00 0.00 1.75
423 424 1.548719 CGGGACAGGTGACAGTTATCA 59.451 52.381 0.00 0.00 0.00 2.15
424 425 2.168521 CGGGACAGGTGACAGTTATCAT 59.831 50.000 0.00 0.00 0.00 2.45
425 426 3.738281 CGGGACAGGTGACAGTTATCATC 60.738 52.174 0.00 0.00 0.00 2.92
426 427 3.432326 GGGACAGGTGACAGTTATCATCC 60.432 52.174 0.00 0.00 29.13 3.51
427 428 3.452627 GGACAGGTGACAGTTATCATCCT 59.547 47.826 0.00 0.00 33.20 3.24
428 429 4.080863 GGACAGGTGACAGTTATCATCCTT 60.081 45.833 0.00 0.00 31.64 3.36
429 430 5.091261 ACAGGTGACAGTTATCATCCTTC 57.909 43.478 0.00 0.00 31.64 3.46
430 431 4.532126 ACAGGTGACAGTTATCATCCTTCA 59.468 41.667 0.00 0.00 31.64 3.02
431 432 5.114780 CAGGTGACAGTTATCATCCTTCAG 58.885 45.833 0.00 0.00 31.64 3.02
432 433 4.780021 AGGTGACAGTTATCATCCTTCAGT 59.220 41.667 0.00 0.00 30.55 3.41
433 434 5.249393 AGGTGACAGTTATCATCCTTCAGTT 59.751 40.000 0.00 0.00 30.55 3.16
434 435 5.352569 GGTGACAGTTATCATCCTTCAGTTG 59.647 44.000 0.00 0.00 0.00 3.16
435 436 5.352569 GTGACAGTTATCATCCTTCAGTTGG 59.647 44.000 0.00 0.00 0.00 3.77
436 437 4.265073 ACAGTTATCATCCTTCAGTTGGC 58.735 43.478 0.00 0.00 0.00 4.52
437 438 4.018960 ACAGTTATCATCCTTCAGTTGGCT 60.019 41.667 0.00 0.00 0.00 4.75
438 439 4.334759 CAGTTATCATCCTTCAGTTGGCTG 59.665 45.833 0.00 0.00 43.87 4.85
472 473 9.994432 ATGACTGAAAACGAATTAGATTTCATC 57.006 29.630 19.17 17.65 40.42 2.92
473 474 8.450964 TGACTGAAAACGAATTAGATTTCATCC 58.549 33.333 19.17 15.06 40.42 3.51
474 475 7.464358 ACTGAAAACGAATTAGATTTCATCCG 58.536 34.615 19.17 12.80 40.42 4.18
475 476 7.333423 ACTGAAAACGAATTAGATTTCATCCGA 59.667 33.333 19.17 2.71 40.42 4.55
476 477 8.208718 TGAAAACGAATTAGATTTCATCCGAT 57.791 30.769 16.33 0.00 37.77 4.18
477 478 8.122330 TGAAAACGAATTAGATTTCATCCGATG 58.878 33.333 16.33 1.55 37.77 3.84
478 479 7.553881 AAACGAATTAGATTTCATCCGATGT 57.446 32.000 8.24 0.00 0.00 3.06
479 480 8.657074 AAACGAATTAGATTTCATCCGATGTA 57.343 30.769 8.24 0.00 0.00 2.29
480 481 7.875316 ACGAATTAGATTTCATCCGATGTAG 57.125 36.000 8.24 0.00 0.00 2.74
481 482 7.658261 ACGAATTAGATTTCATCCGATGTAGA 58.342 34.615 8.24 0.00 0.00 2.59
482 483 8.141909 ACGAATTAGATTTCATCCGATGTAGAA 58.858 33.333 8.24 3.33 0.00 2.10
483 484 9.144747 CGAATTAGATTTCATCCGATGTAGAAT 57.855 33.333 8.24 7.45 0.00 2.40
488 489 8.183104 AGATTTCATCCGATGTAGAATAGACA 57.817 34.615 8.24 0.00 0.00 3.41
489 490 8.303156 AGATTTCATCCGATGTAGAATAGACAG 58.697 37.037 8.24 0.00 0.00 3.51
490 491 6.961360 TTCATCCGATGTAGAATAGACAGT 57.039 37.500 8.24 0.00 0.00 3.55
491 492 6.561737 TCATCCGATGTAGAATAGACAGTC 57.438 41.667 8.24 0.00 0.00 3.51
492 493 5.473846 TCATCCGATGTAGAATAGACAGTCC 59.526 44.000 8.24 0.00 0.00 3.85
493 494 4.142790 TCCGATGTAGAATAGACAGTCCC 58.857 47.826 0.00 0.00 0.00 4.46
494 495 4.141228 TCCGATGTAGAATAGACAGTCCCT 60.141 45.833 0.00 0.00 0.00 4.20
495 496 5.072736 TCCGATGTAGAATAGACAGTCCCTA 59.927 44.000 0.00 0.00 0.00 3.53
496 497 5.768662 CCGATGTAGAATAGACAGTCCCTAA 59.231 44.000 0.00 0.00 0.00 2.69
497 498 6.264744 CCGATGTAGAATAGACAGTCCCTAAA 59.735 42.308 0.00 0.00 0.00 1.85
498 499 7.201884 CCGATGTAGAATAGACAGTCCCTAAAA 60.202 40.741 0.00 0.00 0.00 1.52
639 641 2.730090 GCGTGATGTCAAGGCAAAGATG 60.730 50.000 0.00 0.00 0.00 2.90
640 642 2.743664 CGTGATGTCAAGGCAAAGATGA 59.256 45.455 0.00 0.00 0.00 2.92
641 643 3.376234 CGTGATGTCAAGGCAAAGATGAT 59.624 43.478 0.00 0.00 0.00 2.45
643 645 4.639310 GTGATGTCAAGGCAAAGATGATCT 59.361 41.667 0.00 0.00 0.00 2.75
672 674 0.402121 ACTCCCTCTTCTTTGGTGGC 59.598 55.000 0.00 0.00 0.00 5.01
888 891 2.358003 GCTCAGCAGTGCCTCGTT 60.358 61.111 12.58 0.00 0.00 3.85
1065 1068 0.608308 GGGTTGGTAGCTTGGACACC 60.608 60.000 0.00 0.00 0.00 4.16
1089 1092 1.808945 GGCAGTGTCAAGGTGAAGATG 59.191 52.381 0.00 0.00 0.00 2.90
1095 1098 4.038763 AGTGTCAAGGTGAAGATGTACGAA 59.961 41.667 0.00 0.00 0.00 3.85
1106 1109 6.525628 GTGAAGATGTACGAAATGAAGTACGA 59.474 38.462 0.00 0.00 44.35 3.43
1143 1146 0.615331 AGCGCCTCATCTTTCAAGGA 59.385 50.000 2.29 0.00 31.44 3.36
1194 1197 3.305676 CGGACTACAGCATTCATAGGGAG 60.306 52.174 0.00 0.00 0.00 4.30
1213 1216 3.378427 GGAGTGTACCCTTCATTTGATGC 59.622 47.826 0.00 0.00 0.00 3.91
1254 1257 5.181748 GGAGTCTACACTTCATTTGATGCT 58.818 41.667 0.00 0.00 30.63 3.79
1255 1258 5.293079 GGAGTCTACACTTCATTTGATGCTC 59.707 44.000 0.00 0.00 30.63 4.26
1256 1259 5.181748 AGTCTACACTTCATTTGATGCTCC 58.818 41.667 0.00 0.00 0.00 4.70
1257 1260 4.033358 GTCTACACTTCATTTGATGCTCCG 59.967 45.833 0.00 0.00 0.00 4.63
1258 1261 1.470098 ACACTTCATTTGATGCTCCGC 59.530 47.619 0.00 0.00 0.00 5.54
1259 1262 1.741706 CACTTCATTTGATGCTCCGCT 59.258 47.619 0.00 0.00 0.00 5.52
1260 1263 2.938451 CACTTCATTTGATGCTCCGCTA 59.062 45.455 0.00 0.00 0.00 4.26
1261 1264 3.002042 CACTTCATTTGATGCTCCGCTAG 59.998 47.826 0.00 0.00 0.00 3.42
1272 1275 2.376808 CTCCGCTAGCATTCATAGGG 57.623 55.000 16.45 5.07 34.05 3.53
1273 1276 1.895798 CTCCGCTAGCATTCATAGGGA 59.104 52.381 16.45 9.39 35.75 4.20
1274 1277 1.895798 TCCGCTAGCATTCATAGGGAG 59.104 52.381 16.45 0.00 35.75 4.30
1275 1278 1.620819 CCGCTAGCATTCATAGGGAGT 59.379 52.381 16.45 0.00 35.75 3.85
1276 1279 2.353208 CCGCTAGCATTCATAGGGAGTC 60.353 54.545 16.45 0.00 35.75 3.36
1277 1280 2.560542 CGCTAGCATTCATAGGGAGTCT 59.439 50.000 16.45 0.00 35.75 3.24
1278 1281 3.759086 CGCTAGCATTCATAGGGAGTCTA 59.241 47.826 16.45 0.00 35.75 2.59
1279 1282 4.380023 CGCTAGCATTCATAGGGAGTCTAC 60.380 50.000 16.45 0.00 35.75 2.59
1280 1283 4.524714 GCTAGCATTCATAGGGAGTCTACA 59.475 45.833 10.63 0.00 0.00 2.74
1281 1284 4.946478 AGCATTCATAGGGAGTCTACAC 57.054 45.455 0.00 0.00 0.00 2.90
1282 1285 4.551671 AGCATTCATAGGGAGTCTACACT 58.448 43.478 0.00 0.00 34.57 3.55
1283 1286 4.965532 AGCATTCATAGGGAGTCTACACTT 59.034 41.667 0.00 0.00 30.63 3.16
1284 1287 5.069781 AGCATTCATAGGGAGTCTACACTTC 59.930 44.000 0.00 0.00 30.63 3.01
1285 1288 5.163405 GCATTCATAGGGAGTCTACACTTCA 60.163 44.000 0.00 0.00 30.63 3.02
1286 1289 6.463614 GCATTCATAGGGAGTCTACACTTCAT 60.464 42.308 0.00 0.00 30.63 2.57
1287 1290 7.504403 CATTCATAGGGAGTCTACACTTCATT 58.496 38.462 0.00 0.00 30.63 2.57
1288 1291 7.496346 TTCATAGGGAGTCTACACTTCATTT 57.504 36.000 0.00 0.00 30.63 2.32
1289 1292 6.878317 TCATAGGGAGTCTACACTTCATTTG 58.122 40.000 0.00 0.00 30.63 2.32
1290 1293 6.667848 TCATAGGGAGTCTACACTTCATTTGA 59.332 38.462 0.00 0.00 30.20 2.69
1291 1294 7.345653 TCATAGGGAGTCTACACTTCATTTGAT 59.654 37.037 0.00 0.00 28.37 2.57
1292 1295 5.738909 AGGGAGTCTACACTTCATTTGATG 58.261 41.667 0.00 0.00 30.63 3.07
1293 1296 4.333926 GGGAGTCTACACTTCATTTGATGC 59.666 45.833 0.00 0.00 30.63 3.91
1344 1347 0.874390 GCCTGAACAGCGATTGAACA 59.126 50.000 0.00 0.00 0.00 3.18
1370 1373 3.189287 AGTTCTATTTTGCTGCCGTCTTG 59.811 43.478 0.00 0.00 0.00 3.02
1444 1471 7.404139 ACGTTAATGTGTTGAGTAGTTCTTC 57.596 36.000 0.00 0.00 0.00 2.87
1447 1474 8.004344 CGTTAATGTGTTGAGTAGTTCTTCTTG 58.996 37.037 0.00 0.00 0.00 3.02
1586 1613 3.531538 TCACACAAACTCAGTCTGGTTC 58.468 45.455 0.00 0.00 0.00 3.62
1594 1621 3.406764 ACTCAGTCTGGTTCATTTCTGC 58.593 45.455 0.00 0.00 0.00 4.26
1601 1628 5.088739 GTCTGGTTCATTTCTGCGTTTATG 58.911 41.667 0.00 0.00 0.00 1.90
1626 1653 9.797642 TGCATGTTTTCATCTATATAGGTCAAT 57.202 29.630 9.89 0.00 38.64 2.57
1646 1673 7.770897 GGTCAATGTAATGAGAATCCTAACACT 59.229 37.037 0.00 0.00 0.00 3.55
1647 1674 8.607459 GTCAATGTAATGAGAATCCTAACACTG 58.393 37.037 0.00 0.00 0.00 3.66
1671 1698 7.537715 TGTGATGGCAATGTTTTTAGATACAG 58.462 34.615 0.00 0.00 0.00 2.74
1673 1700 7.485913 GTGATGGCAATGTTTTTAGATACAGTG 59.514 37.037 0.00 0.00 41.72 3.66
1675 1702 6.908825 TGGCAATGTTTTTAGATACAGTGTC 58.091 36.000 0.00 2.71 43.09 3.67
1678 1705 7.148540 GGCAATGTTTTTAGATACAGTGTCGTA 60.149 37.037 0.00 0.00 41.10 3.43
1679 1706 8.225107 GCAATGTTTTTAGATACAGTGTCGTAA 58.775 33.333 0.00 0.00 41.10 3.18
1732 1765 9.591792 CCTACATGTACATAATAGACCATGATG 57.408 37.037 20.47 5.22 35.04 3.07
1733 1766 7.912056 ACATGTACATAATAGACCATGATGC 57.088 36.000 8.32 0.00 35.04 3.91
1765 1798 4.850859 TTCCGTGTTGCATATTAGAACG 57.149 40.909 0.00 0.00 0.00 3.95
1774 1807 3.243873 TGCATATTAGAACGGCTCAGGAG 60.244 47.826 0.00 0.00 0.00 3.69
1817 1850 3.792124 GCACCAGCACAAGAAACACTTAC 60.792 47.826 0.00 0.00 41.58 2.34
1829 1862 6.935741 AGAAACACTTACATGTTGTGCTAA 57.064 33.333 23.05 4.40 42.01 3.09
1835 1868 6.486657 ACACTTACATGTTGTGCTAACAGATT 59.513 34.615 23.05 5.98 37.67 2.40
1836 1869 7.013274 ACACTTACATGTTGTGCTAACAGATTT 59.987 33.333 23.05 5.45 37.67 2.17
1839 1872 5.927030 ACATGTTGTGCTAACAGATTTACG 58.073 37.500 11.64 0.00 37.67 3.18
1850 1883 5.358298 AACAGATTTACGAAGTTTCCAGC 57.642 39.130 0.00 0.00 37.78 4.85
1867 1900 3.071023 TCCAGCCAAGGTAGAAATATCCG 59.929 47.826 0.00 0.00 0.00 4.18
1913 1946 9.807921 AAAAGAATGTTTCTGAAACTCCCTATA 57.192 29.630 27.75 11.16 40.59 1.31
1918 1951 5.248477 TGTTTCTGAAACTCCCTATACAGCT 59.752 40.000 27.75 0.00 41.90 4.24
1984 2017 5.136828 TGCCCTAACTTGAAAGAACATTGA 58.863 37.500 0.00 0.00 0.00 2.57
2011 2044 9.707957 ATATAACAAATAAGTGTCATTTCCCCA 57.292 29.630 0.00 0.00 0.00 4.96
2064 2099 5.302823 AGCTTTCTTGCTTGACTTTACCAAT 59.697 36.000 0.00 0.00 40.93 3.16
2065 2100 5.985530 GCTTTCTTGCTTGACTTTACCAATT 59.014 36.000 0.00 0.00 0.00 2.32
2066 2101 6.479990 GCTTTCTTGCTTGACTTTACCAATTT 59.520 34.615 0.00 0.00 0.00 1.82
2067 2102 7.011389 GCTTTCTTGCTTGACTTTACCAATTTT 59.989 33.333 0.00 0.00 0.00 1.82
2068 2103 8.785329 TTTCTTGCTTGACTTTACCAATTTTT 57.215 26.923 0.00 0.00 0.00 1.94
2132 2167 4.930963 TGACACTACAAACTTTGCAATGG 58.069 39.130 15.92 7.68 0.00 3.16
2133 2168 3.716601 ACACTACAAACTTTGCAATGGC 58.283 40.909 15.92 0.00 41.68 4.40
2184 2219 7.179076 TGACTTGTAATTAACTACTCCCTCC 57.821 40.000 0.00 0.00 0.00 4.30
2185 2220 6.727231 TGACTTGTAATTAACTACTCCCTCCA 59.273 38.462 0.00 0.00 0.00 3.86
2186 2221 7.402071 TGACTTGTAATTAACTACTCCCTCCAT 59.598 37.037 0.00 0.00 0.00 3.41
2187 2222 8.159229 ACTTGTAATTAACTACTCCCTCCATT 57.841 34.615 0.00 0.00 0.00 3.16
2188 2223 8.612145 ACTTGTAATTAACTACTCCCTCCATTT 58.388 33.333 0.00 0.00 0.00 2.32
2189 2224 9.110502 CTTGTAATTAACTACTCCCTCCATTTC 57.889 37.037 0.00 0.00 0.00 2.17
2190 2225 8.388656 TGTAATTAACTACTCCCTCCATTTCT 57.611 34.615 0.00 0.00 0.00 2.52
2191 2226 9.496710 TGTAATTAACTACTCCCTCCATTTCTA 57.503 33.333 0.00 0.00 0.00 2.10
2194 2229 8.625467 ATTAACTACTCCCTCCATTTCTAAGT 57.375 34.615 0.00 0.00 0.00 2.24
2195 2230 9.725206 ATTAACTACTCCCTCCATTTCTAAGTA 57.275 33.333 0.00 0.00 0.00 2.24
2196 2231 9.725206 TTAACTACTCCCTCCATTTCTAAGTAT 57.275 33.333 0.00 0.00 0.00 2.12
2198 2233 9.725206 AACTACTCCCTCCATTTCTAAGTATAA 57.275 33.333 0.00 0.00 0.00 0.98
2199 2234 9.369672 ACTACTCCCTCCATTTCTAAGTATAAG 57.630 37.037 0.00 0.00 0.00 1.73
2200 2235 9.369672 CTACTCCCTCCATTTCTAAGTATAAGT 57.630 37.037 0.00 0.00 0.00 2.24
2201 2236 8.252624 ACTCCCTCCATTTCTAAGTATAAGTC 57.747 38.462 0.00 0.00 0.00 3.01
2202 2237 8.068733 ACTCCCTCCATTTCTAAGTATAAGTCT 58.931 37.037 0.00 0.00 0.00 3.24
2203 2238 8.855804 TCCCTCCATTTCTAAGTATAAGTCTT 57.144 34.615 0.00 0.00 0.00 3.01
2204 2239 9.280456 TCCCTCCATTTCTAAGTATAAGTCTTT 57.720 33.333 0.00 0.00 0.00 2.52
2223 2258 8.644374 AGTCTTTAGAGATTTCAGTACAGACT 57.356 34.615 0.00 0.00 33.92 3.24
2224 2259 9.742144 AGTCTTTAGAGATTTCAGTACAGACTA 57.258 33.333 0.00 0.00 36.38 2.59
2225 2260 9.777575 GTCTTTAGAGATTTCAGTACAGACTAC 57.222 37.037 0.00 0.00 31.94 2.73
2226 2261 9.516546 TCTTTAGAGATTTCAGTACAGACTACA 57.483 33.333 0.00 0.00 33.32 2.74
2230 2265 7.921787 AGAGATTTCAGTACAGACTACATACG 58.078 38.462 0.00 0.00 33.32 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 9.871238 CTGTAGTTCCACTAATAATTACAGTGT 57.129 33.333 19.96 0.00 39.32 3.55
12 13 9.314321 CCACTGTAGTTCCACTAATAATTACAG 57.686 37.037 13.08 13.08 44.77 2.74
13 14 9.038072 TCCACTGTAGTTCCACTAATAATTACA 57.962 33.333 0.00 0.00 31.62 2.41
14 15 9.880157 TTCCACTGTAGTTCCACTAATAATTAC 57.120 33.333 0.00 0.00 31.62 1.89
16 17 9.975218 AATTCCACTGTAGTTCCACTAATAATT 57.025 29.630 0.00 0.00 31.62 1.40
17 18 9.975218 AAATTCCACTGTAGTTCCACTAATAAT 57.025 29.630 0.00 0.00 31.62 1.28
19 20 9.880157 GTAAATTCCACTGTAGTTCCACTAATA 57.120 33.333 0.00 0.00 31.62 0.98
20 21 8.380099 TGTAAATTCCACTGTAGTTCCACTAAT 58.620 33.333 0.00 0.00 31.62 1.73
21 22 7.658575 GTGTAAATTCCACTGTAGTTCCACTAA 59.341 37.037 1.93 0.00 31.62 2.24
22 23 7.015877 AGTGTAAATTCCACTGTAGTTCCACTA 59.984 37.037 9.29 0.00 41.47 2.74
23 24 5.995897 GTGTAAATTCCACTGTAGTTCCACT 59.004 40.000 1.93 0.00 0.00 4.00
24 25 5.995897 AGTGTAAATTCCACTGTAGTTCCAC 59.004 40.000 9.29 0.00 41.47 4.02
25 26 6.182507 AGTGTAAATTCCACTGTAGTTCCA 57.817 37.500 9.29 0.00 41.47 3.53
44 45 8.806146 AGCAAAATCCATTAAGATTTACAGTGT 58.194 29.630 0.00 0.00 43.90 3.55
45 46 9.294030 GAGCAAAATCCATTAAGATTTACAGTG 57.706 33.333 3.80 0.00 43.90 3.66
46 47 9.247861 AGAGCAAAATCCATTAAGATTTACAGT 57.752 29.630 3.80 0.00 43.90 3.55
47 48 9.512435 CAGAGCAAAATCCATTAAGATTTACAG 57.488 33.333 3.80 0.61 43.90 2.74
48 49 9.023962 ACAGAGCAAAATCCATTAAGATTTACA 57.976 29.630 3.80 0.00 43.90 2.41
54 55 7.975616 GCAAATACAGAGCAAAATCCATTAAGA 59.024 33.333 0.00 0.00 0.00 2.10
55 56 7.760794 TGCAAATACAGAGCAAAATCCATTAAG 59.239 33.333 0.00 0.00 34.97 1.85
56 57 7.609960 TGCAAATACAGAGCAAAATCCATTAA 58.390 30.769 0.00 0.00 34.97 1.40
57 58 7.167924 TGCAAATACAGAGCAAAATCCATTA 57.832 32.000 0.00 0.00 34.97 1.90
58 59 6.040209 TGCAAATACAGAGCAAAATCCATT 57.960 33.333 0.00 0.00 34.97 3.16
59 60 5.664294 TGCAAATACAGAGCAAAATCCAT 57.336 34.783 0.00 0.00 34.97 3.41
60 61 5.010922 ACTTGCAAATACAGAGCAAAATCCA 59.989 36.000 0.00 0.00 46.30 3.41
61 62 5.346822 CACTTGCAAATACAGAGCAAAATCC 59.653 40.000 0.00 0.00 46.30 3.01
62 63 5.346822 CCACTTGCAAATACAGAGCAAAATC 59.653 40.000 0.00 0.00 46.30 2.17
63 64 5.010922 TCCACTTGCAAATACAGAGCAAAAT 59.989 36.000 0.00 0.00 46.30 1.82
64 65 4.340666 TCCACTTGCAAATACAGAGCAAAA 59.659 37.500 0.00 0.00 46.30 2.44
65 66 3.888323 TCCACTTGCAAATACAGAGCAAA 59.112 39.130 0.00 0.00 46.30 3.68
66 67 3.485394 TCCACTTGCAAATACAGAGCAA 58.515 40.909 0.00 0.00 45.07 3.91
67 68 3.138884 TCCACTTGCAAATACAGAGCA 57.861 42.857 0.00 0.00 36.32 4.26
68 69 4.708726 ATTCCACTTGCAAATACAGAGC 57.291 40.909 0.00 0.00 0.00 4.09
69 70 9.113838 ACTATAATTCCACTTGCAAATACAGAG 57.886 33.333 0.00 0.00 0.00 3.35
70 71 8.892723 CACTATAATTCCACTTGCAAATACAGA 58.107 33.333 0.00 0.00 0.00 3.41
71 72 8.677300 ACACTATAATTCCACTTGCAAATACAG 58.323 33.333 0.00 0.00 0.00 2.74
72 73 8.574251 ACACTATAATTCCACTTGCAAATACA 57.426 30.769 0.00 0.00 0.00 2.29
78 79 9.853555 CAAAAATACACTATAATTCCACTTGCA 57.146 29.630 0.00 0.00 0.00 4.08
79 80 9.301153 CCAAAAATACACTATAATTCCACTTGC 57.699 33.333 0.00 0.00 0.00 4.01
82 83 8.966868 CCACCAAAAATACACTATAATTCCACT 58.033 33.333 0.00 0.00 0.00 4.00
83 84 8.962679 TCCACCAAAAATACACTATAATTCCAC 58.037 33.333 0.00 0.00 0.00 4.02
84 85 9.535170 TTCCACCAAAAATACACTATAATTCCA 57.465 29.630 0.00 0.00 0.00 3.53
91 92 9.528489 ACAGTAATTCCACCAAAAATACACTAT 57.472 29.630 0.00 0.00 0.00 2.12
92 93 8.788806 CACAGTAATTCCACCAAAAATACACTA 58.211 33.333 0.00 0.00 0.00 2.74
93 94 7.657336 CACAGTAATTCCACCAAAAATACACT 58.343 34.615 0.00 0.00 0.00 3.55
94 95 6.364976 GCACAGTAATTCCACCAAAAATACAC 59.635 38.462 0.00 0.00 0.00 2.90
95 96 6.040955 TGCACAGTAATTCCACCAAAAATACA 59.959 34.615 0.00 0.00 0.00 2.29
96 97 6.451393 TGCACAGTAATTCCACCAAAAATAC 58.549 36.000 0.00 0.00 0.00 1.89
97 98 6.656632 TGCACAGTAATTCCACCAAAAATA 57.343 33.333 0.00 0.00 0.00 1.40
98 99 5.543507 TGCACAGTAATTCCACCAAAAAT 57.456 34.783 0.00 0.00 0.00 1.82
99 100 5.543507 ATGCACAGTAATTCCACCAAAAA 57.456 34.783 0.00 0.00 0.00 1.94
100 101 5.543507 AATGCACAGTAATTCCACCAAAA 57.456 34.783 0.00 0.00 0.00 2.44
101 102 5.543507 AAATGCACAGTAATTCCACCAAA 57.456 34.783 0.00 0.00 0.00 3.28
102 103 5.510520 GGAAAATGCACAGTAATTCCACCAA 60.511 40.000 0.00 0.00 37.02 3.67
103 104 4.021544 GGAAAATGCACAGTAATTCCACCA 60.022 41.667 0.00 0.00 37.02 4.17
104 105 4.494484 GGAAAATGCACAGTAATTCCACC 58.506 43.478 0.00 0.00 37.02 4.61
105 106 4.165779 CGGAAAATGCACAGTAATTCCAC 58.834 43.478 0.00 0.00 36.89 4.02
106 107 3.823873 ACGGAAAATGCACAGTAATTCCA 59.176 39.130 0.00 0.00 36.89 3.53
107 108 4.165779 CACGGAAAATGCACAGTAATTCC 58.834 43.478 0.00 0.00 34.39 3.01
108 109 4.165779 CCACGGAAAATGCACAGTAATTC 58.834 43.478 0.00 0.00 0.00 2.17
109 110 3.572255 ACCACGGAAAATGCACAGTAATT 59.428 39.130 0.00 0.00 0.00 1.40
110 111 3.153919 ACCACGGAAAATGCACAGTAAT 58.846 40.909 0.00 0.00 0.00 1.89
111 112 2.577700 ACCACGGAAAATGCACAGTAA 58.422 42.857 0.00 0.00 0.00 2.24
112 113 2.264005 ACCACGGAAAATGCACAGTA 57.736 45.000 0.00 0.00 0.00 2.74
113 114 1.398692 AACCACGGAAAATGCACAGT 58.601 45.000 0.00 0.00 0.00 3.55
114 115 2.507339 AAACCACGGAAAATGCACAG 57.493 45.000 0.00 0.00 0.00 3.66
115 116 2.969628 AAAACCACGGAAAATGCACA 57.030 40.000 0.00 0.00 0.00 4.57
116 117 4.026393 GTGTAAAAACCACGGAAAATGCAC 60.026 41.667 0.00 0.00 0.00 4.57
117 118 4.113354 GTGTAAAAACCACGGAAAATGCA 58.887 39.130 0.00 0.00 0.00 3.96
118 119 4.208253 CAGTGTAAAAACCACGGAAAATGC 59.792 41.667 0.00 0.00 37.88 3.56
119 120 5.344884 ACAGTGTAAAAACCACGGAAAATG 58.655 37.500 0.00 0.00 37.88 2.32
120 121 5.585820 ACAGTGTAAAAACCACGGAAAAT 57.414 34.783 0.00 0.00 37.88 1.82
121 122 6.506500 TTACAGTGTAAAAACCACGGAAAA 57.493 33.333 13.36 0.00 37.88 2.29
122 123 6.696441 ATTACAGTGTAAAAACCACGGAAA 57.304 33.333 19.19 0.00 37.88 3.13
123 124 6.696441 AATTACAGTGTAAAAACCACGGAA 57.304 33.333 19.19 0.00 37.88 4.30
124 125 6.991531 AGTAATTACAGTGTAAAAACCACGGA 59.008 34.615 19.19 0.00 37.88 4.69
125 126 7.193377 AGTAATTACAGTGTAAAAACCACGG 57.807 36.000 19.19 0.00 37.88 4.94
126 127 8.981647 ACTAGTAATTACAGTGTAAAAACCACG 58.018 33.333 19.19 12.43 37.88 4.94
128 129 9.835389 ACACTAGTAATTACAGTGTAAAAACCA 57.165 29.630 30.91 8.88 41.81 3.67
158 159 9.249053 TGTGAATCAATTATACAAAGGGCTAAA 57.751 29.630 0.00 0.00 0.00 1.85
159 160 8.815565 TGTGAATCAATTATACAAAGGGCTAA 57.184 30.769 0.00 0.00 0.00 3.09
160 161 7.013274 GCTGTGAATCAATTATACAAAGGGCTA 59.987 37.037 0.00 0.00 0.00 3.93
161 162 6.183360 GCTGTGAATCAATTATACAAAGGGCT 60.183 38.462 0.00 0.00 0.00 5.19
162 163 5.979517 GCTGTGAATCAATTATACAAAGGGC 59.020 40.000 0.00 0.00 0.00 5.19
163 164 7.099266 TGCTGTGAATCAATTATACAAAGGG 57.901 36.000 0.00 0.00 0.00 3.95
164 165 6.694411 GCTGCTGTGAATCAATTATACAAAGG 59.306 38.462 0.00 0.00 0.00 3.11
165 166 7.252708 TGCTGCTGTGAATCAATTATACAAAG 58.747 34.615 0.00 0.00 0.00 2.77
166 167 7.155655 TGCTGCTGTGAATCAATTATACAAA 57.844 32.000 0.00 0.00 0.00 2.83
167 168 6.678655 GCTGCTGCTGTGAATCAATTATACAA 60.679 38.462 8.53 0.00 36.03 2.41
168 169 5.220912 GCTGCTGCTGTGAATCAATTATACA 60.221 40.000 8.53 0.00 36.03 2.29
169 170 5.210715 GCTGCTGCTGTGAATCAATTATAC 58.789 41.667 8.53 0.00 36.03 1.47
170 171 4.883006 TGCTGCTGCTGTGAATCAATTATA 59.117 37.500 17.00 0.00 40.48 0.98
171 172 3.697542 TGCTGCTGCTGTGAATCAATTAT 59.302 39.130 17.00 0.00 40.48 1.28
172 173 3.083293 TGCTGCTGCTGTGAATCAATTA 58.917 40.909 17.00 0.00 40.48 1.40
173 174 1.890489 TGCTGCTGCTGTGAATCAATT 59.110 42.857 17.00 0.00 40.48 2.32
174 175 1.472878 CTGCTGCTGCTGTGAATCAAT 59.527 47.619 17.00 0.00 40.48 2.57
175 176 0.879090 CTGCTGCTGCTGTGAATCAA 59.121 50.000 17.00 0.00 40.48 2.57
176 177 1.583495 GCTGCTGCTGCTGTGAATCA 61.583 55.000 22.10 0.00 39.81 2.57
177 178 1.136984 GCTGCTGCTGCTGTGAATC 59.863 57.895 22.10 3.45 39.81 2.52
178 179 2.687805 CGCTGCTGCTGCTGTGAAT 61.688 57.895 24.95 0.00 46.81 2.57
179 180 3.351416 CGCTGCTGCTGCTGTGAA 61.351 61.111 24.95 1.63 46.81 3.18
182 183 2.809861 ATTACCGCTGCTGCTGCTGT 62.810 55.000 25.85 25.85 39.81 4.40
183 184 1.651240 AATTACCGCTGCTGCTGCTG 61.651 55.000 25.43 21.90 40.48 4.41
184 185 0.962356 AAATTACCGCTGCTGCTGCT 60.962 50.000 25.43 12.98 40.48 4.24
185 186 0.732571 TAAATTACCGCTGCTGCTGC 59.267 50.000 19.94 19.94 36.97 5.25
186 187 2.009774 ACTAAATTACCGCTGCTGCTG 58.990 47.619 14.03 9.72 36.97 4.41
187 188 2.009774 CACTAAATTACCGCTGCTGCT 58.990 47.619 14.03 0.00 36.97 4.24
188 189 1.737793 ACACTAAATTACCGCTGCTGC 59.262 47.619 5.34 5.34 0.00 5.25
189 190 2.095853 CCACACTAAATTACCGCTGCTG 59.904 50.000 0.00 0.00 0.00 4.41
190 191 2.290071 ACCACACTAAATTACCGCTGCT 60.290 45.455 0.00 0.00 0.00 4.24
191 192 2.081462 ACCACACTAAATTACCGCTGC 58.919 47.619 0.00 0.00 0.00 5.25
192 193 5.172934 TCTAACCACACTAAATTACCGCTG 58.827 41.667 0.00 0.00 0.00 5.18
193 194 5.410355 TCTAACCACACTAAATTACCGCT 57.590 39.130 0.00 0.00 0.00 5.52
194 195 5.583457 ACATCTAACCACACTAAATTACCGC 59.417 40.000 0.00 0.00 0.00 5.68
195 196 6.814644 TGACATCTAACCACACTAAATTACCG 59.185 38.462 0.00 0.00 0.00 4.02
196 197 8.732746 ATGACATCTAACCACACTAAATTACC 57.267 34.615 0.00 0.00 0.00 2.85
197 198 9.378551 TGATGACATCTAACCACACTAAATTAC 57.621 33.333 16.25 0.00 0.00 1.89
198 199 9.599866 CTGATGACATCTAACCACACTAAATTA 57.400 33.333 16.25 0.00 0.00 1.40
199 200 8.103305 ACTGATGACATCTAACCACACTAAATT 58.897 33.333 16.25 0.00 0.00 1.82
200 201 7.624549 ACTGATGACATCTAACCACACTAAAT 58.375 34.615 16.25 0.00 0.00 1.40
201 202 7.004555 ACTGATGACATCTAACCACACTAAA 57.995 36.000 16.25 0.00 0.00 1.85
202 203 6.605471 ACTGATGACATCTAACCACACTAA 57.395 37.500 16.25 0.00 0.00 2.24
203 204 6.605471 AACTGATGACATCTAACCACACTA 57.395 37.500 16.25 0.00 0.00 2.74
204 205 5.489792 AACTGATGACATCTAACCACACT 57.510 39.130 16.25 0.00 0.00 3.55
205 206 6.373779 CAAAACTGATGACATCTAACCACAC 58.626 40.000 16.25 0.00 0.00 3.82
206 207 5.473162 CCAAAACTGATGACATCTAACCACA 59.527 40.000 16.25 0.00 0.00 4.17
207 208 5.473504 ACCAAAACTGATGACATCTAACCAC 59.526 40.000 16.25 0.00 0.00 4.16
208 209 5.630121 ACCAAAACTGATGACATCTAACCA 58.370 37.500 16.25 0.00 0.00 3.67
209 210 5.123979 GGACCAAAACTGATGACATCTAACC 59.876 44.000 16.25 4.13 0.00 2.85
210 211 5.940470 AGGACCAAAACTGATGACATCTAAC 59.060 40.000 16.25 0.00 0.00 2.34
211 212 6.126863 AGGACCAAAACTGATGACATCTAA 57.873 37.500 16.25 0.00 0.00 2.10
212 213 5.762179 AGGACCAAAACTGATGACATCTA 57.238 39.130 16.25 2.72 0.00 1.98
213 214 4.647564 AGGACCAAAACTGATGACATCT 57.352 40.909 16.25 0.00 0.00 2.90
214 215 5.712152 AAAGGACCAAAACTGATGACATC 57.288 39.130 8.59 8.59 0.00 3.06
215 216 5.011023 GGAAAAGGACCAAAACTGATGACAT 59.989 40.000 0.00 0.00 0.00 3.06
216 217 4.340950 GGAAAAGGACCAAAACTGATGACA 59.659 41.667 0.00 0.00 0.00 3.58
217 218 4.584743 AGGAAAAGGACCAAAACTGATGAC 59.415 41.667 0.00 0.00 0.00 3.06
218 219 4.803452 AGGAAAAGGACCAAAACTGATGA 58.197 39.130 0.00 0.00 0.00 2.92
219 220 4.021981 GGAGGAAAAGGACCAAAACTGATG 60.022 45.833 0.00 0.00 0.00 3.07
220 221 4.140924 AGGAGGAAAAGGACCAAAACTGAT 60.141 41.667 0.00 0.00 0.00 2.90
221 222 3.204382 AGGAGGAAAAGGACCAAAACTGA 59.796 43.478 0.00 0.00 0.00 3.41
222 223 3.566351 AGGAGGAAAAGGACCAAAACTG 58.434 45.455 0.00 0.00 0.00 3.16
223 224 3.747708 CGAGGAGGAAAAGGACCAAAACT 60.748 47.826 0.00 0.00 0.00 2.66
224 225 2.552743 CGAGGAGGAAAAGGACCAAAAC 59.447 50.000 0.00 0.00 0.00 2.43
225 226 2.173996 ACGAGGAGGAAAAGGACCAAAA 59.826 45.455 0.00 0.00 0.00 2.44
226 227 1.772453 ACGAGGAGGAAAAGGACCAAA 59.228 47.619 0.00 0.00 0.00 3.28
227 228 1.071699 CACGAGGAGGAAAAGGACCAA 59.928 52.381 0.00 0.00 0.00 3.67
228 229 0.685097 CACGAGGAGGAAAAGGACCA 59.315 55.000 0.00 0.00 0.00 4.02
229 230 0.685660 ACACGAGGAGGAAAAGGACC 59.314 55.000 0.00 0.00 0.00 4.46
230 231 2.561858 ACTACACGAGGAGGAAAAGGAC 59.438 50.000 0.00 0.00 0.00 3.85
231 232 2.885616 ACTACACGAGGAGGAAAAGGA 58.114 47.619 0.00 0.00 0.00 3.36
232 233 3.679824 AACTACACGAGGAGGAAAAGG 57.320 47.619 0.00 0.00 0.00 3.11
233 234 4.492611 GGTAACTACACGAGGAGGAAAAG 58.507 47.826 0.00 0.00 0.00 2.27
234 235 4.525912 GGTAACTACACGAGGAGGAAAA 57.474 45.455 0.00 0.00 0.00 2.29
250 251 3.293337 ACAAAAGGTGGACCAAGGTAAC 58.707 45.455 0.00 0.00 38.89 2.50
251 252 3.673543 ACAAAAGGTGGACCAAGGTAA 57.326 42.857 0.00 0.00 38.89 2.85
252 253 3.673543 AACAAAAGGTGGACCAAGGTA 57.326 42.857 0.00 0.00 38.89 3.08
253 254 2.543037 AACAAAAGGTGGACCAAGGT 57.457 45.000 0.00 0.00 38.89 3.50
254 255 3.562182 ACTAACAAAAGGTGGACCAAGG 58.438 45.455 0.00 0.00 38.89 3.61
255 256 5.592104 AAACTAACAAAAGGTGGACCAAG 57.408 39.130 0.00 0.00 38.89 3.61
256 257 6.361768 AAAAACTAACAAAAGGTGGACCAA 57.638 33.333 0.00 0.00 38.89 3.67
257 258 7.321908 GTTAAAAACTAACAAAAGGTGGACCA 58.678 34.615 0.00 0.00 38.89 4.02
258 259 6.757947 GGTTAAAAACTAACAAAAGGTGGACC 59.242 38.462 0.00 0.00 0.00 4.46
259 260 6.757947 GGGTTAAAAACTAACAAAAGGTGGAC 59.242 38.462 0.00 0.00 0.00 4.02
260 261 6.405619 CGGGTTAAAAACTAACAAAAGGTGGA 60.406 38.462 0.00 0.00 0.00 4.02
261 262 5.749588 CGGGTTAAAAACTAACAAAAGGTGG 59.250 40.000 0.00 0.00 0.00 4.61
262 263 6.331845 ACGGGTTAAAAACTAACAAAAGGTG 58.668 36.000 0.00 0.00 0.00 4.00
263 264 6.528537 ACGGGTTAAAAACTAACAAAAGGT 57.471 33.333 0.00 0.00 0.00 3.50
264 265 7.830940 AAACGGGTTAAAAACTAACAAAAGG 57.169 32.000 0.00 0.00 0.00 3.11
265 266 8.533965 GCTAAACGGGTTAAAAACTAACAAAAG 58.466 33.333 0.00 0.00 0.00 2.27
266 267 8.249638 AGCTAAACGGGTTAAAAACTAACAAAA 58.750 29.630 0.00 0.00 0.00 2.44
267 268 7.701501 CAGCTAAACGGGTTAAAAACTAACAAA 59.298 33.333 0.00 0.00 0.00 2.83
268 269 7.066766 TCAGCTAAACGGGTTAAAAACTAACAA 59.933 33.333 0.00 0.00 0.00 2.83
269 270 6.541641 TCAGCTAAACGGGTTAAAAACTAACA 59.458 34.615 0.00 0.00 0.00 2.41
270 271 6.958255 TCAGCTAAACGGGTTAAAAACTAAC 58.042 36.000 0.00 0.00 0.00 2.34
271 272 7.748691 ATCAGCTAAACGGGTTAAAAACTAA 57.251 32.000 0.00 0.00 0.00 2.24
272 273 7.748691 AATCAGCTAAACGGGTTAAAAACTA 57.251 32.000 0.00 0.00 0.00 2.24
273 274 6.644248 AATCAGCTAAACGGGTTAAAAACT 57.356 33.333 0.00 0.00 0.00 2.66
274 275 8.975410 ATAAATCAGCTAAACGGGTTAAAAAC 57.025 30.769 0.00 0.00 0.00 2.43
277 278 9.398538 ACATATAAATCAGCTAAACGGGTTAAA 57.601 29.630 0.00 0.00 0.00 1.52
278 279 8.967664 ACATATAAATCAGCTAAACGGGTTAA 57.032 30.769 0.00 0.00 0.00 2.01
279 280 9.480053 GTACATATAAATCAGCTAAACGGGTTA 57.520 33.333 0.00 0.00 0.00 2.85
280 281 7.170320 CGTACATATAAATCAGCTAAACGGGTT 59.830 37.037 0.00 0.00 0.00 4.11
281 282 6.643770 CGTACATATAAATCAGCTAAACGGGT 59.356 38.462 0.00 0.00 0.00 5.28
282 283 6.090358 CCGTACATATAAATCAGCTAAACGGG 59.910 42.308 0.00 0.00 40.83 5.28
283 284 6.090358 CCCGTACATATAAATCAGCTAAACGG 59.910 42.308 0.00 0.00 43.34 4.44
284 285 6.643770 ACCCGTACATATAAATCAGCTAAACG 59.356 38.462 0.00 0.00 0.00 3.60
285 286 7.958053 ACCCGTACATATAAATCAGCTAAAC 57.042 36.000 0.00 0.00 0.00 2.01
286 287 8.832521 CAAACCCGTACATATAAATCAGCTAAA 58.167 33.333 0.00 0.00 0.00 1.85
287 288 8.205512 TCAAACCCGTACATATAAATCAGCTAA 58.794 33.333 0.00 0.00 0.00 3.09
288 289 7.728148 TCAAACCCGTACATATAAATCAGCTA 58.272 34.615 0.00 0.00 0.00 3.32
289 290 6.588204 TCAAACCCGTACATATAAATCAGCT 58.412 36.000 0.00 0.00 0.00 4.24
290 291 6.854496 TCAAACCCGTACATATAAATCAGC 57.146 37.500 0.00 0.00 0.00 4.26
296 297 9.887629 TCAAACTATTCAAACCCGTACATATAA 57.112 29.630 0.00 0.00 0.00 0.98
298 299 8.836413 CATCAAACTATTCAAACCCGTACATAT 58.164 33.333 0.00 0.00 0.00 1.78
299 300 7.825270 ACATCAAACTATTCAAACCCGTACATA 59.175 33.333 0.00 0.00 0.00 2.29
300 301 6.657541 ACATCAAACTATTCAAACCCGTACAT 59.342 34.615 0.00 0.00 0.00 2.29
301 302 5.998981 ACATCAAACTATTCAAACCCGTACA 59.001 36.000 0.00 0.00 0.00 2.90
302 303 6.490566 ACATCAAACTATTCAAACCCGTAC 57.509 37.500 0.00 0.00 0.00 3.67
303 304 7.281324 CCATACATCAAACTATTCAAACCCGTA 59.719 37.037 0.00 0.00 0.00 4.02
304 305 6.094881 CCATACATCAAACTATTCAAACCCGT 59.905 38.462 0.00 0.00 0.00 5.28
305 306 6.317642 TCCATACATCAAACTATTCAAACCCG 59.682 38.462 0.00 0.00 0.00 5.28
306 307 7.416326 GGTCCATACATCAAACTATTCAAACCC 60.416 40.741 0.00 0.00 0.00 4.11
307 308 7.416326 GGGTCCATACATCAAACTATTCAAACC 60.416 40.741 0.00 0.00 0.00 3.27
308 309 7.480810 GGGTCCATACATCAAACTATTCAAAC 58.519 38.462 0.00 0.00 0.00 2.93
309 310 6.317642 CGGGTCCATACATCAAACTATTCAAA 59.682 38.462 0.00 0.00 0.00 2.69
310 311 5.820423 CGGGTCCATACATCAAACTATTCAA 59.180 40.000 0.00 0.00 0.00 2.69
311 312 5.104693 ACGGGTCCATACATCAAACTATTCA 60.105 40.000 0.00 0.00 0.00 2.57
312 313 5.365619 ACGGGTCCATACATCAAACTATTC 58.634 41.667 0.00 0.00 0.00 1.75
313 314 5.367945 ACGGGTCCATACATCAAACTATT 57.632 39.130 0.00 0.00 0.00 1.73
314 315 5.367945 AACGGGTCCATACATCAAACTAT 57.632 39.130 0.00 0.00 0.00 2.12
315 316 4.829872 AACGGGTCCATACATCAAACTA 57.170 40.909 0.00 0.00 0.00 2.24
316 317 3.713826 AACGGGTCCATACATCAAACT 57.286 42.857 0.00 0.00 0.00 2.66
317 318 5.220970 CCATAAACGGGTCCATACATCAAAC 60.221 44.000 0.00 0.00 0.00 2.93
318 319 4.884744 CCATAAACGGGTCCATACATCAAA 59.115 41.667 0.00 0.00 0.00 2.69
319 320 4.456535 CCATAAACGGGTCCATACATCAA 58.543 43.478 0.00 0.00 0.00 2.57
320 321 3.746114 GCCATAAACGGGTCCATACATCA 60.746 47.826 0.00 0.00 0.00 3.07
321 322 2.812011 GCCATAAACGGGTCCATACATC 59.188 50.000 0.00 0.00 0.00 3.06
322 323 2.441750 AGCCATAAACGGGTCCATACAT 59.558 45.455 0.00 0.00 27.85 2.29
323 324 1.841277 AGCCATAAACGGGTCCATACA 59.159 47.619 0.00 0.00 27.85 2.29
324 325 2.616842 CAAGCCATAAACGGGTCCATAC 59.383 50.000 0.00 0.00 35.11 2.39
325 326 2.925724 CAAGCCATAAACGGGTCCATA 58.074 47.619 0.00 0.00 35.11 2.74
326 327 1.762708 CAAGCCATAAACGGGTCCAT 58.237 50.000 0.00 0.00 35.11 3.41
327 328 0.963355 GCAAGCCATAAACGGGTCCA 60.963 55.000 0.00 0.00 35.11 4.02
328 329 0.679960 AGCAAGCCATAAACGGGTCC 60.680 55.000 0.00 0.00 35.11 4.46
329 330 0.451783 CAGCAAGCCATAAACGGGTC 59.548 55.000 0.00 0.00 35.11 4.46
330 331 0.251165 ACAGCAAGCCATAAACGGGT 60.251 50.000 0.00 0.00 38.81 5.28
331 332 0.171007 CACAGCAAGCCATAAACGGG 59.829 55.000 0.00 0.00 0.00 5.28
332 333 0.881118 ACACAGCAAGCCATAAACGG 59.119 50.000 0.00 0.00 0.00 4.44
333 334 1.401409 CCACACAGCAAGCCATAAACG 60.401 52.381 0.00 0.00 0.00 3.60
334 335 1.885887 TCCACACAGCAAGCCATAAAC 59.114 47.619 0.00 0.00 0.00 2.01
335 336 1.885887 GTCCACACAGCAAGCCATAAA 59.114 47.619 0.00 0.00 0.00 1.40
336 337 1.533625 GTCCACACAGCAAGCCATAA 58.466 50.000 0.00 0.00 0.00 1.90
337 338 0.322456 GGTCCACACAGCAAGCCATA 60.322 55.000 0.00 0.00 0.00 2.74
338 339 1.604593 GGTCCACACAGCAAGCCAT 60.605 57.895 0.00 0.00 0.00 4.40
339 340 2.203337 GGTCCACACAGCAAGCCA 60.203 61.111 0.00 0.00 0.00 4.75
340 341 2.113986 AGGTCCACACAGCAAGCC 59.886 61.111 0.00 0.00 0.00 4.35
341 342 1.103398 AACAGGTCCACACAGCAAGC 61.103 55.000 0.00 0.00 0.00 4.01
342 343 1.392589 AAACAGGTCCACACAGCAAG 58.607 50.000 0.00 0.00 0.00 4.01
343 344 2.171659 TCTAAACAGGTCCACACAGCAA 59.828 45.455 0.00 0.00 0.00 3.91
344 345 1.765904 TCTAAACAGGTCCACACAGCA 59.234 47.619 0.00 0.00 0.00 4.41
345 346 2.543777 TCTAAACAGGTCCACACAGC 57.456 50.000 0.00 0.00 0.00 4.40
346 347 3.139077 GGTTCTAAACAGGTCCACACAG 58.861 50.000 0.00 0.00 0.00 3.66
347 348 2.484065 CGGTTCTAAACAGGTCCACACA 60.484 50.000 0.00 0.00 0.00 3.72
348 349 2.140717 CGGTTCTAAACAGGTCCACAC 58.859 52.381 0.00 0.00 0.00 3.82
349 350 2.040939 TCGGTTCTAAACAGGTCCACA 58.959 47.619 0.00 0.00 0.00 4.17
350 351 2.825861 TCGGTTCTAAACAGGTCCAC 57.174 50.000 0.00 0.00 0.00 4.02
351 352 4.069304 CAAATCGGTTCTAAACAGGTCCA 58.931 43.478 0.00 0.00 0.00 4.02
352 353 3.119955 GCAAATCGGTTCTAAACAGGTCC 60.120 47.826 0.00 0.00 0.00 4.46
353 354 3.500680 TGCAAATCGGTTCTAAACAGGTC 59.499 43.478 0.00 0.00 0.00 3.85
354 355 3.482436 TGCAAATCGGTTCTAAACAGGT 58.518 40.909 0.00 0.00 0.00 4.00
355 356 3.119849 CCTGCAAATCGGTTCTAAACAGG 60.120 47.826 0.00 0.00 36.53 4.00
356 357 3.502211 ACCTGCAAATCGGTTCTAAACAG 59.498 43.478 0.00 0.00 0.00 3.16
357 358 3.252215 CACCTGCAAATCGGTTCTAAACA 59.748 43.478 0.00 0.00 0.00 2.83
358 359 3.821841 CACCTGCAAATCGGTTCTAAAC 58.178 45.455 0.00 0.00 0.00 2.01
359 360 2.227865 GCACCTGCAAATCGGTTCTAAA 59.772 45.455 0.00 0.00 41.59 1.85
360 361 1.810151 GCACCTGCAAATCGGTTCTAA 59.190 47.619 0.00 0.00 41.59 2.10
361 362 1.448985 GCACCTGCAAATCGGTTCTA 58.551 50.000 0.00 0.00 41.59 2.10
362 363 2.257353 GCACCTGCAAATCGGTTCT 58.743 52.632 0.00 0.00 41.59 3.01
363 364 4.868195 GCACCTGCAAATCGGTTC 57.132 55.556 0.00 0.00 41.59 3.62
373 374 1.174712 TCTTTCTGCCTTGCACCTGC 61.175 55.000 0.00 0.00 42.50 4.85
374 375 1.000938 GTTCTTTCTGCCTTGCACCTG 60.001 52.381 0.00 0.00 33.79 4.00
375 376 1.322442 GTTCTTTCTGCCTTGCACCT 58.678 50.000 0.00 0.00 33.79 4.00
376 377 1.000938 CTGTTCTTTCTGCCTTGCACC 60.001 52.381 0.00 0.00 33.79 5.01
377 378 1.000938 CCTGTTCTTTCTGCCTTGCAC 60.001 52.381 0.00 0.00 33.79 4.57
378 379 1.321474 CCTGTTCTTTCTGCCTTGCA 58.679 50.000 0.00 0.00 36.92 4.08
379 380 0.600057 CCCTGTTCTTTCTGCCTTGC 59.400 55.000 0.00 0.00 0.00 4.01
380 381 1.202927 TCCCCTGTTCTTTCTGCCTTG 60.203 52.381 0.00 0.00 0.00 3.61
381 382 1.149101 TCCCCTGTTCTTTCTGCCTT 58.851 50.000 0.00 0.00 0.00 4.35
382 383 0.402121 GTCCCCTGTTCTTTCTGCCT 59.598 55.000 0.00 0.00 0.00 4.75
383 384 0.110486 TGTCCCCTGTTCTTTCTGCC 59.890 55.000 0.00 0.00 0.00 4.85
384 385 1.239347 GTGTCCCCTGTTCTTTCTGC 58.761 55.000 0.00 0.00 0.00 4.26
385 386 1.512926 CGTGTCCCCTGTTCTTTCTG 58.487 55.000 0.00 0.00 0.00 3.02
386 387 0.396811 CCGTGTCCCCTGTTCTTTCT 59.603 55.000 0.00 0.00 0.00 2.52
387 388 0.605589 CCCGTGTCCCCTGTTCTTTC 60.606 60.000 0.00 0.00 0.00 2.62
388 389 1.057851 TCCCGTGTCCCCTGTTCTTT 61.058 55.000 0.00 0.00 0.00 2.52
389 390 1.460689 TCCCGTGTCCCCTGTTCTT 60.461 57.895 0.00 0.00 0.00 2.52
390 391 2.203182 TCCCGTGTCCCCTGTTCT 59.797 61.111 0.00 0.00 0.00 3.01
391 392 2.346365 GTCCCGTGTCCCCTGTTC 59.654 66.667 0.00 0.00 0.00 3.18
392 393 2.446994 TGTCCCGTGTCCCCTGTT 60.447 61.111 0.00 0.00 0.00 3.16
393 394 2.923035 CTGTCCCGTGTCCCCTGT 60.923 66.667 0.00 0.00 0.00 4.00
394 395 3.706373 CCTGTCCCGTGTCCCCTG 61.706 72.222 0.00 0.00 0.00 4.45
395 396 4.250170 ACCTGTCCCGTGTCCCCT 62.250 66.667 0.00 0.00 0.00 4.79
396 397 4.016706 CACCTGTCCCGTGTCCCC 62.017 72.222 0.00 0.00 0.00 4.81
397 398 2.920912 TCACCTGTCCCGTGTCCC 60.921 66.667 0.00 0.00 32.86 4.46
398 399 2.342648 GTCACCTGTCCCGTGTCC 59.657 66.667 0.00 0.00 32.86 4.02
399 400 1.006102 CTGTCACCTGTCCCGTGTC 60.006 63.158 0.00 0.00 32.86 3.67
400 401 1.335132 AACTGTCACCTGTCCCGTGT 61.335 55.000 0.00 0.00 32.86 4.49
401 402 0.677288 TAACTGTCACCTGTCCCGTG 59.323 55.000 0.00 0.00 0.00 4.94
402 403 1.549170 GATAACTGTCACCTGTCCCGT 59.451 52.381 0.00 0.00 0.00 5.28
403 404 1.548719 TGATAACTGTCACCTGTCCCG 59.451 52.381 0.00 0.00 0.00 5.14
404 405 3.432326 GGATGATAACTGTCACCTGTCCC 60.432 52.174 0.00 0.00 0.00 4.46
405 406 3.452627 AGGATGATAACTGTCACCTGTCC 59.547 47.826 0.00 0.00 32.27 4.02
406 407 4.744795 AGGATGATAACTGTCACCTGTC 57.255 45.455 0.00 0.00 32.27 3.51
407 408 4.532126 TGAAGGATGATAACTGTCACCTGT 59.468 41.667 0.00 0.00 33.15 4.00
408 409 5.089970 TGAAGGATGATAACTGTCACCTG 57.910 43.478 0.00 0.00 33.15 4.00
409 410 4.780021 ACTGAAGGATGATAACTGTCACCT 59.220 41.667 0.00 0.00 33.77 4.00
410 411 5.091261 ACTGAAGGATGATAACTGTCACC 57.909 43.478 0.00 0.00 0.00 4.02
411 412 5.352569 CCAACTGAAGGATGATAACTGTCAC 59.647 44.000 0.00 0.00 0.00 3.67
412 413 5.491070 CCAACTGAAGGATGATAACTGTCA 58.509 41.667 0.00 0.00 0.00 3.58
413 414 4.333926 GCCAACTGAAGGATGATAACTGTC 59.666 45.833 0.00 0.00 0.00 3.51
414 415 4.018960 AGCCAACTGAAGGATGATAACTGT 60.019 41.667 0.00 0.00 0.00 3.55
415 416 4.521146 AGCCAACTGAAGGATGATAACTG 58.479 43.478 0.00 0.00 0.00 3.16
416 417 4.851639 AGCCAACTGAAGGATGATAACT 57.148 40.909 0.00 0.00 0.00 2.24
446 447 9.994432 GATGAAATCTAATTCGTTTTCAGTCAT 57.006 29.630 16.60 5.32 40.32 3.06
447 448 8.450964 GGATGAAATCTAATTCGTTTTCAGTCA 58.549 33.333 16.60 1.11 44.71 3.41
448 449 7.636359 CGGATGAAATCTAATTCGTTTTCAGTC 59.364 37.037 16.60 13.96 44.71 3.51
449 450 7.333423 TCGGATGAAATCTAATTCGTTTTCAGT 59.667 33.333 16.60 8.83 44.71 3.41
450 451 7.684670 TCGGATGAAATCTAATTCGTTTTCAG 58.315 34.615 16.60 7.89 44.71 3.02
451 452 7.603963 TCGGATGAAATCTAATTCGTTTTCA 57.396 32.000 14.84 14.84 44.71 2.69
452 453 8.122952 ACATCGGATGAAATCTAATTCGTTTTC 58.877 33.333 23.98 6.58 44.71 2.29
453 454 7.985476 ACATCGGATGAAATCTAATTCGTTTT 58.015 30.769 23.98 0.00 44.71 2.43
454 455 7.553881 ACATCGGATGAAATCTAATTCGTTT 57.446 32.000 23.98 0.00 44.71 3.60
455 456 8.141909 TCTACATCGGATGAAATCTAATTCGTT 58.858 33.333 23.98 0.00 44.71 3.85
456 457 7.658261 TCTACATCGGATGAAATCTAATTCGT 58.342 34.615 23.98 0.00 44.71 3.85
457 458 8.520835 TTCTACATCGGATGAAATCTAATTCG 57.479 34.615 23.98 0.00 44.71 3.34
462 463 9.297037 TGTCTATTCTACATCGGATGAAATCTA 57.703 33.333 23.98 5.19 44.71 1.98
463 464 8.183104 TGTCTATTCTACATCGGATGAAATCT 57.817 34.615 23.98 4.24 44.71 2.40
464 465 8.085296 ACTGTCTATTCTACATCGGATGAAATC 58.915 37.037 23.98 9.26 44.55 2.17
465 466 7.957002 ACTGTCTATTCTACATCGGATGAAAT 58.043 34.615 23.98 19.15 0.00 2.17
466 467 7.348080 ACTGTCTATTCTACATCGGATGAAA 57.652 36.000 23.98 14.36 0.00 2.69
467 468 6.016192 GGACTGTCTATTCTACATCGGATGAA 60.016 42.308 23.98 8.83 0.00 2.57
468 469 5.473846 GGACTGTCTATTCTACATCGGATGA 59.526 44.000 23.98 7.36 0.00 2.92
469 470 5.336055 GGGACTGTCTATTCTACATCGGATG 60.336 48.000 16.20 16.20 0.00 3.51
470 471 4.767928 GGGACTGTCTATTCTACATCGGAT 59.232 45.833 7.85 0.00 0.00 4.18
471 472 4.141228 AGGGACTGTCTATTCTACATCGGA 60.141 45.833 7.85 0.00 37.18 4.55
472 473 4.145807 AGGGACTGTCTATTCTACATCGG 58.854 47.826 7.85 0.00 37.18 4.18
473 474 6.879276 TTAGGGACTGTCTATTCTACATCG 57.121 41.667 7.85 0.00 41.52 3.84
639 641 5.056553 AGAGGGAGTACTGTTCCTAGATC 57.943 47.826 0.00 0.00 35.01 2.75
640 642 5.194942 AGAAGAGGGAGTACTGTTCCTAGAT 59.805 44.000 0.00 0.00 40.51 1.98
641 643 4.540906 AGAAGAGGGAGTACTGTTCCTAGA 59.459 45.833 0.00 0.00 40.51 2.43
643 645 4.949966 AGAAGAGGGAGTACTGTTCCTA 57.050 45.455 0.00 0.00 40.51 2.94
672 674 2.104859 CCTGTCATCCAGCTGCACG 61.105 63.158 8.66 0.00 40.06 5.34
690 692 4.815269 TGTTGTAATTGGCCAATGTAAGC 58.185 39.130 31.28 19.84 0.00 3.09
697 699 2.233431 GCTGGATGTTGTAATTGGCCAA 59.767 45.455 23.00 23.00 0.00 4.52
809 812 0.733729 ATCGACGGTGTCTAGACTGC 59.266 55.000 23.01 15.22 0.00 4.40
1065 1068 2.029073 ACCTTGACACTGCCGACG 59.971 61.111 0.00 0.00 0.00 5.12
1089 1092 4.102035 AGGGTCGTACTTCATTTCGTAC 57.898 45.455 0.00 0.00 34.20 3.67
1095 1098 2.910977 AGGGAAAGGGTCGTACTTCATT 59.089 45.455 0.00 0.00 0.00 2.57
1106 1109 1.547901 GCTGCTGTTTAGGGAAAGGGT 60.548 52.381 0.00 0.00 0.00 4.34
1143 1146 2.348998 CCGTCCTCCAGCTGCTTT 59.651 61.111 8.66 0.00 0.00 3.51
1163 1166 1.982073 GCTGTAGTCCGCCAATGTGC 61.982 60.000 0.00 0.00 0.00 4.57
1165 1168 0.253044 ATGCTGTAGTCCGCCAATGT 59.747 50.000 0.00 0.00 0.00 2.71
1194 1197 3.378427 GGAGCATCAAATGAAGGGTACAC 59.622 47.826 0.00 0.00 36.25 2.90
1213 1216 0.604780 CCCTATGAATGCTGGCGGAG 60.605 60.000 0.00 0.00 0.00 4.63
1254 1257 1.895798 CTCCCTATGAATGCTAGCGGA 59.104 52.381 10.77 6.88 0.00 5.54
1255 1258 1.620819 ACTCCCTATGAATGCTAGCGG 59.379 52.381 10.77 2.77 0.00 5.52
1256 1259 2.560542 AGACTCCCTATGAATGCTAGCG 59.439 50.000 10.77 0.00 0.00 4.26
1257 1260 4.524714 TGTAGACTCCCTATGAATGCTAGC 59.475 45.833 8.10 8.10 0.00 3.42
1258 1261 5.772672 AGTGTAGACTCCCTATGAATGCTAG 59.227 44.000 0.00 0.00 0.00 3.42
1259 1262 5.706447 AGTGTAGACTCCCTATGAATGCTA 58.294 41.667 0.00 0.00 0.00 3.49
1260 1263 4.551671 AGTGTAGACTCCCTATGAATGCT 58.448 43.478 0.00 0.00 0.00 3.79
1261 1264 4.946478 AGTGTAGACTCCCTATGAATGC 57.054 45.455 0.00 0.00 0.00 3.56
1262 1265 6.471233 TGAAGTGTAGACTCCCTATGAATG 57.529 41.667 0.00 0.00 0.00 2.67
1263 1266 7.682787 AATGAAGTGTAGACTCCCTATGAAT 57.317 36.000 0.00 0.00 0.00 2.57
1264 1267 7.180229 TCAAATGAAGTGTAGACTCCCTATGAA 59.820 37.037 0.00 0.00 0.00 2.57
1265 1268 6.667848 TCAAATGAAGTGTAGACTCCCTATGA 59.332 38.462 0.00 0.00 0.00 2.15
1266 1269 6.878317 TCAAATGAAGTGTAGACTCCCTATG 58.122 40.000 0.00 0.00 0.00 2.23
1267 1270 7.504403 CATCAAATGAAGTGTAGACTCCCTAT 58.496 38.462 0.00 0.00 0.00 2.57
1268 1271 6.630413 GCATCAAATGAAGTGTAGACTCCCTA 60.630 42.308 0.00 0.00 0.00 3.53
1269 1272 5.738909 CATCAAATGAAGTGTAGACTCCCT 58.261 41.667 0.00 0.00 0.00 4.20
1270 1273 4.333926 GCATCAAATGAAGTGTAGACTCCC 59.666 45.833 0.00 0.00 0.00 4.30
1271 1274 5.181748 AGCATCAAATGAAGTGTAGACTCC 58.818 41.667 0.00 0.00 0.00 3.85
1272 1275 5.293079 GGAGCATCAAATGAAGTGTAGACTC 59.707 44.000 0.00 0.00 36.25 3.36
1273 1276 5.181748 GGAGCATCAAATGAAGTGTAGACT 58.818 41.667 0.00 0.00 36.25 3.24
1274 1277 4.033358 CGGAGCATCAAATGAAGTGTAGAC 59.967 45.833 0.00 0.00 36.25 2.59
1275 1278 4.183865 CGGAGCATCAAATGAAGTGTAGA 58.816 43.478 0.00 0.00 36.25 2.59
1276 1279 4.526970 CGGAGCATCAAATGAAGTGTAG 57.473 45.455 0.00 0.00 36.25 2.74
1344 1347 2.228822 CGGCAGCAAAATAGAACTGGTT 59.771 45.455 0.00 0.00 0.00 3.67
1370 1373 1.135972 CAAATGACACACCGCTACTGC 60.136 52.381 0.00 0.00 0.00 4.40
1534 1561 5.339008 AATGAGTCTATTGTCCGCAACTA 57.661 39.130 0.00 0.00 37.44 2.24
1586 1613 5.766702 AAACATGCATAAACGCAGAAATG 57.233 34.783 0.00 0.00 46.99 2.32
1626 1653 7.239763 TCACAGTGTTAGGATTCTCATTACA 57.760 36.000 0.00 0.00 0.00 2.41
1646 1673 7.176515 ACTGTATCTAAAAACATTGCCATCACA 59.823 33.333 0.00 0.00 0.00 3.58
1647 1674 7.485913 CACTGTATCTAAAAACATTGCCATCAC 59.514 37.037 0.00 0.00 0.00 3.06
1701 1734 8.638873 TGGTCTATTATGTACATGTAGGTGAAG 58.361 37.037 18.81 4.89 0.00 3.02
1704 1737 8.585018 TCATGGTCTATTATGTACATGTAGGTG 58.415 37.037 18.81 14.57 37.53 4.00
1732 1765 5.098893 TGCAACACGGAATATACAAATTGC 58.901 37.500 0.00 0.00 40.18 3.56
1733 1766 9.462174 AATATGCAACACGGAATATACAAATTG 57.538 29.630 0.00 0.00 0.00 2.32
1760 1793 2.096248 CTAACTCTCCTGAGCCGTTCT 58.904 52.381 5.38 0.00 43.85 3.01
1774 1807 0.466124 AATCAGGCCTCGGCTAACTC 59.534 55.000 0.00 0.00 41.60 3.01
1817 1850 6.164408 TCGTAAATCTGTTAGCACAACATG 57.836 37.500 4.58 0.00 30.36 3.21
1829 1862 3.751698 GGCTGGAAACTTCGTAAATCTGT 59.248 43.478 0.00 0.00 0.00 3.41
1835 1868 2.158726 ACCTTGGCTGGAAACTTCGTAA 60.159 45.455 4.24 0.00 0.00 3.18
1836 1869 1.418637 ACCTTGGCTGGAAACTTCGTA 59.581 47.619 4.24 0.00 0.00 3.43
1839 1872 3.418684 TCTACCTTGGCTGGAAACTTC 57.581 47.619 4.24 0.00 0.00 3.01
1850 1883 5.291905 ACCTTCGGATATTTCTACCTTGG 57.708 43.478 0.00 0.00 0.00 3.61
1867 1900 5.854431 TTTTTGTGAAAGTGCAAACCTTC 57.146 34.783 0.00 0.00 34.77 3.46
1909 1942 7.387948 ACAAAGTAAACACCTTCAGCTGTATAG 59.612 37.037 14.67 9.64 0.00 1.31
1913 1946 4.096382 CACAAAGTAAACACCTTCAGCTGT 59.904 41.667 14.67 0.00 0.00 4.40
1918 1951 9.747898 ATATATTCCACAAAGTAAACACCTTCA 57.252 29.630 0.00 0.00 0.00 3.02
1957 1990 6.817765 TGTTCTTTCAAGTTAGGGCATTAG 57.182 37.500 0.00 0.00 0.00 1.73
2071 2106 9.941325 AGCCATTGTCAACATTATTATTTGAAA 57.059 25.926 0.00 0.00 31.21 2.69
2132 2167 7.042335 TCTAACTATTCAGGAGCTTAAGTTGC 58.958 38.462 4.02 3.23 0.00 4.17
2139 2174 8.719645 AGTCATATCTAACTATTCAGGAGCTT 57.280 34.615 0.00 0.00 0.00 3.74
2141 2176 8.364142 ACAAGTCATATCTAACTATTCAGGAGC 58.636 37.037 0.00 0.00 0.00 4.70
2197 2232 9.084533 AGTCTGTACTGAAATCTCTAAAGACTT 57.915 33.333 3.77 0.00 37.89 3.01
2198 2233 8.644374 AGTCTGTACTGAAATCTCTAAAGACT 57.356 34.615 3.77 1.32 36.67 3.24
2199 2234 9.777575 GTAGTCTGTACTGAAATCTCTAAAGAC 57.222 37.037 3.77 0.00 36.36 3.01
2200 2235 9.516546 TGTAGTCTGTACTGAAATCTCTAAAGA 57.483 33.333 3.77 0.00 36.36 2.52
2204 2239 9.043079 CGTATGTAGTCTGTACTGAAATCTCTA 57.957 37.037 3.77 0.00 36.36 2.43
2205 2240 7.921787 CGTATGTAGTCTGTACTGAAATCTCT 58.078 38.462 3.77 0.12 36.36 3.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.