Multiple sequence alignment - TraesCS3A01G499200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G499200 chr3A 100.000 5796 0 0 1 5796 724481590 724487385 0.000000e+00 10704.0
1 TraesCS3A01G499200 chr3A 78.711 1226 219 31 2674 3872 724647827 724646617 0.000000e+00 780.0
2 TraesCS3A01G499200 chr3A 87.445 677 83 2 2657 3332 724493579 724492904 0.000000e+00 778.0
3 TraesCS3A01G499200 chr3A 90.878 296 25 2 1016 1309 724496659 724496364 4.210000e-106 396.0
4 TraesCS3A01G499200 chr3A 80.974 431 66 10 3412 3827 724492866 724492437 1.560000e-85 327.0
5 TraesCS3A01G499200 chr3A 81.887 265 46 2 3569 3832 724622621 724622358 7.560000e-54 222.0
6 TraesCS3A01G499200 chr3D 93.305 1897 82 23 1979 3872 593215390 593217244 0.000000e+00 2758.0
7 TraesCS3A01G499200 chr3D 93.009 1273 43 10 3920 5192 593217243 593218469 0.000000e+00 1816.0
8 TraesCS3A01G499200 chr3D 87.161 1550 106 38 70 1585 593213511 593215001 0.000000e+00 1674.0
9 TraesCS3A01G499200 chr3D 83.237 1217 166 23 2663 3865 593223112 593221920 0.000000e+00 1083.0
10 TraesCS3A01G499200 chr3D 79.047 1217 217 30 2674 3865 593339374 593340577 0.000000e+00 800.0
11 TraesCS3A01G499200 chr3D 90.747 281 21 5 1030 1309 593226638 593226362 2.550000e-98 370.0
12 TraesCS3A01G499200 chr3D 86.760 287 33 3 1016 1301 593448775 593448493 1.210000e-81 315.0
13 TraesCS3A01G499200 chr3D 97.727 44 1 0 2434 2477 601501325 601501282 6.230000e-10 76.8
14 TraesCS3A01G499200 chr3B 89.274 1902 145 28 3920 5796 795571101 795572968 0.000000e+00 2327.0
15 TraesCS3A01G499200 chr3B 95.591 1202 41 5 2653 3853 795569660 795570850 0.000000e+00 1916.0
16 TraesCS3A01G499200 chr3B 84.230 1376 109 62 200 1517 795567175 795568500 0.000000e+00 1240.0
17 TraesCS3A01G499200 chr3B 82.750 1229 180 20 2649 3865 795802452 795801244 0.000000e+00 1066.0
18 TraesCS3A01G499200 chr3B 79.017 1201 203 40 2674 3841 796463763 796464947 0.000000e+00 776.0
19 TraesCS3A01G499200 chr3B 78.478 1222 223 29 2674 3869 796313078 796314285 0.000000e+00 763.0
20 TraesCS3A01G499200 chr3B 83.179 648 107 2 2676 3322 796654886 796654240 5.000000e-165 592.0
21 TraesCS3A01G499200 chr3B 93.061 245 17 0 1034 1278 795810124 795809880 5.520000e-95 359.0
22 TraesCS3A01G499200 chr3B 88.095 252 30 0 1024 1275 796454234 796454485 3.390000e-77 300.0
23 TraesCS3A01G499200 chr3B 80.176 454 38 17 2011 2431 795569121 795569555 5.680000e-75 292.0
24 TraesCS3A01G499200 chr3B 87.302 252 32 0 1024 1275 796008346 796008597 7.350000e-74 289.0
25 TraesCS3A01G499200 chr3B 85.985 264 36 1 3569 3832 796016830 796017092 1.230000e-71 281.0
26 TraesCS3A01G499200 chr3B 89.815 108 8 3 70 175 795567081 795567187 1.010000e-27 135.0
27 TraesCS3A01G499200 chr3B 100.000 48 0 0 1 48 523283293 523283340 8.000000e-14 89.8
28 TraesCS3A01G499200 chr3B 93.220 59 2 2 1 59 440116633 440116689 1.030000e-12 86.1
29 TraesCS3A01G499200 chrUn 85.769 260 37 0 1016 1275 333952518 333952259 5.720000e-70 276.0
30 TraesCS3A01G499200 chr2B 76.132 486 112 4 2680 3163 254288461 254287978 9.640000e-63 252.0
31 TraesCS3A01G499200 chr2B 100.000 48 0 0 1 48 138052825 138052872 8.000000e-14 89.8
32 TraesCS3A01G499200 chr2B 100.000 47 0 0 1 47 77567141 77567095 2.880000e-13 87.9
33 TraesCS3A01G499200 chr2B 100.000 47 0 0 1 47 110768860 110768814 2.880000e-13 87.9
34 TraesCS3A01G499200 chr2B 94.737 57 1 2 1 55 296051945 296051889 2.880000e-13 87.9
35 TraesCS3A01G499200 chr2A 74.225 613 146 9 2680 3286 213113831 213113225 4.490000e-61 246.0
36 TraesCS3A01G499200 chr2D 73.899 613 148 9 2680 3286 196860094 196859488 9.710000e-58 235.0
37 TraesCS3A01G499200 chr2D 97.778 45 1 0 2432 2476 600441738 600441782 1.730000e-10 78.7
38 TraesCS3A01G499200 chr2D 83.133 83 3 8 3867 3946 79990852 79990926 1.350000e-06 65.8
39 TraesCS3A01G499200 chr7B 100.000 51 0 0 1 51 713765355 713765405 1.720000e-15 95.3
40 TraesCS3A01G499200 chr5B 88.608 79 5 4 3872 3946 465826043 465826121 6.180000e-15 93.5
41 TraesCS3A01G499200 chr5B 95.556 45 2 0 2433 2477 533571357 533571401 8.060000e-09 73.1
42 TraesCS3A01G499200 chr4A 97.959 49 1 0 1 49 352477834 352477786 1.030000e-12 86.1
43 TraesCS3A01G499200 chr6B 96.078 51 2 0 1 51 333171379 333171329 3.720000e-12 84.2
44 TraesCS3A01G499200 chr1B 95.745 47 2 0 2431 2477 539573348 539573302 6.230000e-10 76.8
45 TraesCS3A01G499200 chr1B 93.333 45 2 1 3906 3949 674031375 674031331 1.350000e-06 65.8
46 TraesCS3A01G499200 chr5A 97.674 43 1 0 2435 2477 690354716 690354758 2.240000e-09 75.0
47 TraesCS3A01G499200 chr5D 92.000 50 4 0 2427 2476 496216249 496216298 2.900000e-08 71.3
48 TraesCS3A01G499200 chr1A 93.617 47 3 0 2435 2481 18309782 18309736 2.900000e-08 71.3
49 TraesCS3A01G499200 chr1A 95.455 44 2 0 2432 2475 419022996 419023039 2.900000e-08 71.3
50 TraesCS3A01G499200 chr6D 93.478 46 3 0 2432 2477 229398096 229398141 1.040000e-07 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G499200 chr3A 724481590 724487385 5795 False 10704.000000 10704 100.000000 1 5796 1 chr3A.!!$F1 5795
1 TraesCS3A01G499200 chr3A 724646617 724647827 1210 True 780.000000 780 78.711000 2674 3872 1 chr3A.!!$R2 1198
2 TraesCS3A01G499200 chr3A 724492437 724496659 4222 True 500.333333 778 86.432333 1016 3827 3 chr3A.!!$R3 2811
3 TraesCS3A01G499200 chr3D 593213511 593218469 4958 False 2082.666667 2758 91.158333 70 5192 3 chr3D.!!$F2 5122
4 TraesCS3A01G499200 chr3D 593339374 593340577 1203 False 800.000000 800 79.047000 2674 3865 1 chr3D.!!$F1 1191
5 TraesCS3A01G499200 chr3D 593221920 593226638 4718 True 726.500000 1083 86.992000 1030 3865 2 chr3D.!!$R3 2835
6 TraesCS3A01G499200 chr3B 795567081 795572968 5887 False 1182.000000 2327 87.817200 70 5796 5 chr3B.!!$F8 5726
7 TraesCS3A01G499200 chr3B 795801244 795802452 1208 True 1066.000000 1066 82.750000 2649 3865 1 chr3B.!!$R1 1216
8 TraesCS3A01G499200 chr3B 796463763 796464947 1184 False 776.000000 776 79.017000 2674 3841 1 chr3B.!!$F7 1167
9 TraesCS3A01G499200 chr3B 796313078 796314285 1207 False 763.000000 763 78.478000 2674 3869 1 chr3B.!!$F5 1195
10 TraesCS3A01G499200 chr3B 796654240 796654886 646 True 592.000000 592 83.179000 2676 3322 1 chr3B.!!$R3 646
11 TraesCS3A01G499200 chr2A 213113225 213113831 606 True 246.000000 246 74.225000 2680 3286 1 chr2A.!!$R1 606
12 TraesCS3A01G499200 chr2D 196859488 196860094 606 True 235.000000 235 73.899000 2680 3286 1 chr2D.!!$R1 606

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
774 827 0.170339 TATCTCATATCCGCGTGCCG 59.830 55.0 4.92 0.0 0.00 5.69 F
1059 1115 0.323816 AGAGCATCCTCACGGACTCA 60.324 55.0 0.00 0.0 43.51 3.41 F
1555 1634 0.609151 TGCGGAACCGAATAACTCCA 59.391 50.0 17.63 0.0 42.83 3.86 F
2167 2563 0.320334 ATTGCACGTCACACGATCCA 60.320 50.0 2.48 0.0 46.05 3.41 F
3753 7609 0.531311 AAAGAGTTTCCGACGCCGTT 60.531 50.0 0.00 0.0 0.00 4.44 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1967 2251 0.036388 CGAATGCACCCTGGTGTAGT 60.036 55.0 17.19 12.39 46.90 2.73 R
1978 2262 0.168128 GCCTACAACACCGAATGCAC 59.832 55.0 0.00 0.00 0.00 4.57 R
3085 6878 1.819928 CCACGACAATGATCCACCAA 58.180 50.0 0.00 0.00 0.00 3.67 R
3993 8085 0.476338 TCAACCTGCCCTGTTGCTTA 59.524 50.0 5.49 0.00 42.17 3.09 R
5603 9735 0.037697 CCCAAATGAGACGGACGACA 60.038 55.0 0.00 0.00 0.00 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.102953 TGACATCCCTGGAATAGTTCAAG 57.897 43.478 0.00 0.00 0.00 3.02
30 31 5.677319 CTGGAATAGTTCAAGGACCTACA 57.323 43.478 0.00 0.00 0.00 2.74
31 32 5.665459 CTGGAATAGTTCAAGGACCTACAG 58.335 45.833 0.00 0.00 0.00 2.74
32 33 5.091552 TGGAATAGTTCAAGGACCTACAGT 58.908 41.667 0.00 0.00 0.00 3.55
33 34 5.046591 TGGAATAGTTCAAGGACCTACAGTG 60.047 44.000 0.00 0.00 0.00 3.66
34 35 2.841442 AGTTCAAGGACCTACAGTGC 57.159 50.000 0.00 0.00 37.00 4.40
35 36 2.047061 AGTTCAAGGACCTACAGTGCA 58.953 47.619 0.00 0.00 39.79 4.57
36 37 2.143925 GTTCAAGGACCTACAGTGCAC 58.856 52.381 9.40 9.40 39.79 4.57
37 38 1.717032 TCAAGGACCTACAGTGCACT 58.283 50.000 15.25 15.25 39.79 4.40
38 39 2.047061 TCAAGGACCTACAGTGCACTT 58.953 47.619 18.94 11.49 39.79 3.16
39 40 2.037251 TCAAGGACCTACAGTGCACTTC 59.963 50.000 18.94 11.95 39.79 3.01
40 41 1.717032 AGGACCTACAGTGCACTTCA 58.283 50.000 18.94 6.81 39.79 3.02
41 42 1.344763 AGGACCTACAGTGCACTTCAC 59.655 52.381 18.94 6.28 45.98 3.18
116 117 1.933021 TCACACCGGTTCCACTAGAT 58.067 50.000 2.97 0.00 0.00 1.98
119 120 2.028476 CACACCGGTTCCACTAGATGAA 60.028 50.000 2.97 0.00 0.00 2.57
122 123 2.635915 ACCGGTTCCACTAGATGAAACA 59.364 45.455 0.00 0.00 0.00 2.83
145 146 1.402968 CAAAGATGGGCAGATTCACCG 59.597 52.381 0.00 0.00 0.00 4.94
146 147 0.911769 AAGATGGGCAGATTCACCGA 59.088 50.000 0.00 0.00 0.00 4.69
147 148 1.135094 AGATGGGCAGATTCACCGAT 58.865 50.000 0.00 0.00 0.00 4.18
163 166 0.390492 CGATCACCCTGAGCTGCATA 59.610 55.000 1.02 0.00 29.10 3.14
198 201 2.954753 GCTGGCTTGGTTGACGTCG 61.955 63.158 11.62 0.00 0.00 5.12
248 258 3.949754 CTGCATGTATGATTGGTTGGACT 59.050 43.478 0.00 0.00 0.00 3.85
261 271 3.843619 TGGTTGGACTTGGATGTGAGATA 59.156 43.478 0.00 0.00 0.00 1.98
268 278 3.782523 ACTTGGATGTGAGATACCCATGT 59.217 43.478 0.00 0.00 32.58 3.21
299 309 4.264543 CGGATCTTCGGAAAAGATGTTG 57.735 45.455 5.08 0.00 37.14 3.33
302 312 2.159382 TCTTCGGAAAAGATGTTGGGC 58.841 47.619 0.00 0.00 0.00 5.36
345 356 1.945354 GCTCGTGTTCCTCGGGATCA 61.945 60.000 0.00 0.00 0.00 2.92
476 507 0.602638 TGGAGCACAGTTAACCAGCG 60.603 55.000 0.88 0.00 0.00 5.18
504 535 1.699634 TGGACAGAGGGAAGGACAAAG 59.300 52.381 0.00 0.00 0.00 2.77
657 702 7.117241 TGACTTTAGTAAATCGCAGTTTCAG 57.883 36.000 0.00 0.00 0.00 3.02
687 732 1.169661 CGGATCTCCAGACTCCCTCG 61.170 65.000 0.00 0.00 35.14 4.63
689 734 1.456705 ATCTCCAGACTCCCTCGCC 60.457 63.158 0.00 0.00 0.00 5.54
774 827 0.170339 TATCTCATATCCGCGTGCCG 59.830 55.000 4.92 0.00 0.00 5.69
804 857 4.222145 GGAGTAAGTATGACACCAACCAGA 59.778 45.833 0.00 0.00 29.32 3.86
850 903 1.338020 CAAACTGCAAACCTCCCAGAC 59.662 52.381 0.00 0.00 0.00 3.51
858 911 4.101448 CCTCCCAGACCCAAGCCG 62.101 72.222 0.00 0.00 0.00 5.52
877 933 7.705325 CCAAGCCGTTACTATATATACACATCC 59.295 40.741 0.00 0.00 0.00 3.51
904 960 2.352030 GGGACGATAACAGTCAACGACA 60.352 50.000 0.00 0.00 40.20 4.35
905 961 2.915463 GGACGATAACAGTCAACGACAG 59.085 50.000 0.00 0.00 40.20 3.51
906 962 2.325761 ACGATAACAGTCAACGACAGC 58.674 47.619 0.00 0.00 34.60 4.40
907 963 2.287970 ACGATAACAGTCAACGACAGCA 60.288 45.455 0.00 0.00 34.60 4.41
908 964 2.090658 CGATAACAGTCAACGACAGCAC 59.909 50.000 0.00 0.00 34.60 4.40
909 965 1.483316 TAACAGTCAACGACAGCACG 58.517 50.000 0.00 0.00 34.60 5.34
919 975 4.539083 ACAGCACGGCGGAACACA 62.539 61.111 13.24 0.00 0.00 3.72
922 978 4.307908 GCACGGCGGAACACACAC 62.308 66.667 13.24 0.00 0.00 3.82
965 1021 4.691820 CCTCGCCGCGCTAGCTAG 62.692 72.222 16.84 16.84 42.32 3.42
990 1046 1.433879 CGAGCCTCTTGTCCTACGG 59.566 63.158 0.00 0.00 0.00 4.02
991 1047 1.313812 CGAGCCTCTTGTCCTACGGT 61.314 60.000 0.00 0.00 0.00 4.83
992 1048 0.456628 GAGCCTCTTGTCCTACGGTC 59.543 60.000 0.00 0.00 0.00 4.79
994 1050 1.310933 GCCTCTTGTCCTACGGTCGA 61.311 60.000 0.00 0.00 0.00 4.20
1059 1115 0.323816 AGAGCATCCTCACGGACTCA 60.324 55.000 0.00 0.00 43.51 3.41
1309 1370 3.036819 TCACCTCCATCTCATCTCCAAG 58.963 50.000 0.00 0.00 0.00 3.61
1328 1404 4.445052 CCAAGACAATCGTGTACGTGTAAA 59.555 41.667 0.00 0.00 38.41 2.01
1350 1426 3.823281 TCTTCGTAACCAAACCACTCA 57.177 42.857 0.00 0.00 0.00 3.41
1357 1433 4.379394 CGTAACCAAACCACTCATTGATGG 60.379 45.833 11.36 11.36 42.13 3.51
1374 1450 2.214376 TGGCATTCTCCATTTCGGTT 57.786 45.000 0.00 0.00 35.57 4.44
1375 1451 2.091541 TGGCATTCTCCATTTCGGTTC 58.908 47.619 0.00 0.00 35.57 3.62
1377 1453 2.689983 GGCATTCTCCATTTCGGTTCAT 59.310 45.455 0.00 0.00 35.57 2.57
1379 1455 4.023707 GGCATTCTCCATTTCGGTTCATAG 60.024 45.833 0.00 0.00 35.57 2.23
1381 1457 5.471456 GCATTCTCCATTTCGGTTCATAGAT 59.529 40.000 0.00 0.00 35.57 1.98
1382 1458 6.650807 GCATTCTCCATTTCGGTTCATAGATA 59.349 38.462 0.00 0.00 35.57 1.98
1383 1459 7.148507 GCATTCTCCATTTCGGTTCATAGATAG 60.149 40.741 0.00 0.00 35.57 2.08
1384 1460 6.978674 TCTCCATTTCGGTTCATAGATAGT 57.021 37.500 0.00 0.00 35.57 2.12
1385 1461 8.473358 TTCTCCATTTCGGTTCATAGATAGTA 57.527 34.615 0.00 0.00 35.57 1.82
1386 1462 7.883217 TCTCCATTTCGGTTCATAGATAGTAC 58.117 38.462 0.00 0.00 35.57 2.73
1387 1463 7.504574 TCTCCATTTCGGTTCATAGATAGTACA 59.495 37.037 0.00 0.00 35.57 2.90
1388 1464 8.014070 TCCATTTCGGTTCATAGATAGTACAA 57.986 34.615 0.00 0.00 35.57 2.41
1389 1465 8.647796 TCCATTTCGGTTCATAGATAGTACAAT 58.352 33.333 0.00 0.00 35.57 2.71
1436 1515 6.653273 ATCTCATGTATTTTGAGTCACACG 57.347 37.500 0.00 0.00 41.13 4.49
1446 1525 3.120321 TGAGTCACACGTTGGCTTTAT 57.880 42.857 6.36 0.00 41.66 1.40
1447 1526 4.260139 TGAGTCACACGTTGGCTTTATA 57.740 40.909 6.36 0.00 41.66 0.98
1451 1530 6.205853 TGAGTCACACGTTGGCTTTATATTTT 59.794 34.615 6.36 0.00 41.66 1.82
1519 1598 9.454859 TGGAAAACCTGTTTTAAAATCATTTGT 57.545 25.926 7.91 0.99 42.26 2.83
1555 1634 0.609151 TGCGGAACCGAATAACTCCA 59.391 50.000 17.63 0.00 42.83 3.86
1563 1646 2.872245 ACCGAATAACTCCATGCATTCG 59.128 45.455 0.00 1.71 45.71 3.34
1571 1654 4.558538 ACTCCATGCATTCGCTATTTTC 57.441 40.909 0.00 0.00 39.64 2.29
1572 1655 3.947196 ACTCCATGCATTCGCTATTTTCA 59.053 39.130 0.00 0.00 39.64 2.69
1573 1656 4.036027 ACTCCATGCATTCGCTATTTTCAG 59.964 41.667 0.00 0.00 39.64 3.02
1574 1657 3.047796 CCATGCATTCGCTATTTTCAGC 58.952 45.455 0.00 0.00 39.64 4.26
1575 1658 2.849880 TGCATTCGCTATTTTCAGCC 57.150 45.000 0.00 0.00 38.37 4.85
1576 1659 2.368439 TGCATTCGCTATTTTCAGCCT 58.632 42.857 0.00 0.00 38.37 4.58
1577 1660 3.540617 TGCATTCGCTATTTTCAGCCTA 58.459 40.909 0.00 0.00 38.37 3.93
1578 1661 3.561310 TGCATTCGCTATTTTCAGCCTAG 59.439 43.478 0.00 0.00 38.37 3.02
1580 1663 4.453819 GCATTCGCTATTTTCAGCCTAGAT 59.546 41.667 0.00 0.00 38.37 1.98
1581 1664 5.639506 GCATTCGCTATTTTCAGCCTAGATA 59.360 40.000 0.00 0.00 38.37 1.98
1582 1665 6.183360 GCATTCGCTATTTTCAGCCTAGATAG 60.183 42.308 0.00 0.00 38.37 2.08
1583 1666 6.406692 TTCGCTATTTTCAGCCTAGATAGT 57.593 37.500 0.00 0.00 38.37 2.12
1584 1667 7.520451 TTCGCTATTTTCAGCCTAGATAGTA 57.480 36.000 0.00 0.00 38.37 1.82
1586 1669 6.715718 TCGCTATTTTCAGCCTAGATAGTACT 59.284 38.462 0.00 0.00 38.37 2.73
1588 1671 7.024768 GCTATTTTCAGCCTAGATAGTACTCG 58.975 42.308 0.00 0.00 35.40 4.18
1589 1672 5.769484 TTTTCAGCCTAGATAGTACTCGG 57.231 43.478 0.00 0.00 0.00 4.63
1590 1673 4.434545 TTCAGCCTAGATAGTACTCGGT 57.565 45.455 0.00 0.00 0.00 4.69
1591 1674 4.005487 TCAGCCTAGATAGTACTCGGTC 57.995 50.000 0.00 0.00 0.00 4.79
1592 1675 3.647113 TCAGCCTAGATAGTACTCGGTCT 59.353 47.826 0.00 4.65 0.00 3.85
1593 1676 3.749088 CAGCCTAGATAGTACTCGGTCTG 59.251 52.174 0.00 2.78 0.00 3.51
1596 1741 4.690280 GCCTAGATAGTACTCGGTCTGTAC 59.310 50.000 0.00 0.00 40.19 2.90
1613 1758 5.477637 GTCTGTACAGAGGGAGTACTTTCTT 59.522 44.000 25.81 0.00 41.76 2.52
1616 1761 5.836898 TGTACAGAGGGAGTACTTTCTTTGA 59.163 40.000 17.63 5.28 41.76 2.69
1618 1763 4.238514 CAGAGGGAGTACTTTCTTTGACG 58.761 47.826 0.00 0.00 0.00 4.35
1619 1764 3.258622 AGAGGGAGTACTTTCTTTGACGG 59.741 47.826 0.00 0.00 0.00 4.79
1635 1780 2.504996 TGACGGGTTCGGGGTTTATTAT 59.495 45.455 0.00 0.00 41.39 1.28
1639 1784 4.201657 CGGGTTCGGGGTTTATTATTCTT 58.798 43.478 0.00 0.00 0.00 2.52
1640 1785 4.641541 CGGGTTCGGGGTTTATTATTCTTT 59.358 41.667 0.00 0.00 0.00 2.52
1641 1786 5.449451 CGGGTTCGGGGTTTATTATTCTTTG 60.449 44.000 0.00 0.00 0.00 2.77
1645 1790 7.122501 GGTTCGGGGTTTATTATTCTTTGGTAA 59.877 37.037 0.00 0.00 0.00 2.85
1646 1791 7.628769 TCGGGGTTTATTATTCTTTGGTAAC 57.371 36.000 0.00 0.00 0.00 2.50
1665 1919 7.235079 TGGTAACATCTCCATTTTGGTTTAGA 58.765 34.615 0.00 0.00 46.17 2.10
1686 1940 9.507329 TTTAGATAGTATTTTCTCCATCATGGC 57.493 33.333 0.00 0.00 37.47 4.40
1688 1942 7.753630 AGATAGTATTTTCTCCATCATGGCTT 58.246 34.615 0.00 0.00 37.47 4.35
1693 1947 7.781693 AGTATTTTCTCCATCATGGCTTATTGT 59.218 33.333 0.00 0.00 37.47 2.71
1702 1959 6.209986 CCATCATGGCTTATTGTTCACCATAT 59.790 38.462 0.00 0.00 39.08 1.78
1706 1963 8.538701 TCATGGCTTATTGTTCACCATATTTTT 58.461 29.630 0.00 0.00 39.08 1.94
1709 1966 6.538381 GGCTTATTGTTCACCATATTTTTGGG 59.462 38.462 0.00 0.00 41.35 4.12
1712 1969 4.963318 TGTTCACCATATTTTTGGGCAA 57.037 36.364 0.00 0.00 41.35 4.52
1713 1970 5.495926 TGTTCACCATATTTTTGGGCAAT 57.504 34.783 0.00 0.00 41.35 3.56
1714 1971 6.611613 TGTTCACCATATTTTTGGGCAATA 57.388 33.333 0.00 0.00 41.35 1.90
1715 1972 6.402222 TGTTCACCATATTTTTGGGCAATAC 58.598 36.000 0.00 0.00 41.35 1.89
1718 1975 7.251321 TCACCATATTTTTGGGCAATACTTT 57.749 32.000 0.00 0.00 41.35 2.66
1719 1976 7.102346 TCACCATATTTTTGGGCAATACTTTG 58.898 34.615 0.00 0.00 41.35 2.77
1740 1997 8.287503 ACTTTGCCGACAAATTAACTAGTAAAG 58.712 33.333 0.00 0.16 44.54 1.85
1742 1999 7.124347 TGCCGACAAATTAACTAGTAAAGTG 57.876 36.000 0.00 0.00 38.88 3.16
1743 2000 6.019762 GCCGACAAATTAACTAGTAAAGTGC 58.980 40.000 0.00 0.00 38.88 4.40
1748 2005 9.177304 GACAAATTAACTAGTAAAGTGCAAACC 57.823 33.333 0.00 0.00 38.88 3.27
1756 2013 3.498397 AGTAAAGTGCAAACCAGATGTCG 59.502 43.478 0.00 0.00 0.00 4.35
1757 2014 1.967319 AAGTGCAAACCAGATGTCGT 58.033 45.000 0.00 0.00 0.00 4.34
1761 2018 3.250040 AGTGCAAACCAGATGTCGTAAAC 59.750 43.478 0.00 0.00 0.00 2.01
1785 2042 7.582719 ACATTATACCATGGGAAAGCTCTTTA 58.417 34.615 18.09 0.00 32.11 1.85
1822 2079 8.081025 TGTATGTGTAATATTCGCGTATAACCA 58.919 33.333 9.56 4.31 0.00 3.67
1824 2081 5.921976 TGTGTAATATTCGCGTATAACCAGG 59.078 40.000 9.56 0.00 0.00 4.45
1845 2102 3.118261 GGCCACTCCTTGATGACATTCTA 60.118 47.826 0.00 0.00 0.00 2.10
1858 2115 7.970384 TGATGACATTCTACATTTCGGTTTAC 58.030 34.615 0.00 0.00 0.00 2.01
1870 2131 1.126079 CGGTTTACATAGTAGGCGCG 58.874 55.000 0.00 0.00 0.00 6.86
1912 2183 6.808829 TCAAATTGATTCATCATTAGTGGGC 58.191 36.000 0.00 0.00 36.56 5.36
1918 2189 2.627945 TCATCATTAGTGGGCGTTCAC 58.372 47.619 2.74 2.74 37.89 3.18
1932 2203 1.269051 CGTTCACTTGACCAAAAGGGC 60.269 52.381 0.00 0.00 42.05 5.19
1933 2204 1.754226 GTTCACTTGACCAAAAGGGCA 59.246 47.619 0.00 0.00 42.05 5.36
1937 2221 3.069443 TCACTTGACCAAAAGGGCATTTC 59.931 43.478 0.00 0.00 42.05 2.17
1945 2229 2.803956 CAAAAGGGCATTTCACTTGCTG 59.196 45.455 0.00 0.00 40.03 4.41
1955 2239 3.701205 TTCACTTGCTGCTTAGATCCA 57.299 42.857 0.00 0.00 0.00 3.41
1956 2240 3.701205 TCACTTGCTGCTTAGATCCAA 57.299 42.857 0.00 0.00 0.00 3.53
1959 2243 5.933617 TCACTTGCTGCTTAGATCCAATAT 58.066 37.500 0.00 0.00 0.00 1.28
1960 2244 5.761726 TCACTTGCTGCTTAGATCCAATATG 59.238 40.000 0.00 0.00 0.00 1.78
1961 2245 5.048921 CACTTGCTGCTTAGATCCAATATGG 60.049 44.000 0.00 0.00 39.43 2.74
1962 2246 4.712051 TGCTGCTTAGATCCAATATGGT 57.288 40.909 0.00 0.00 39.03 3.55
1963 2247 5.823861 TGCTGCTTAGATCCAATATGGTA 57.176 39.130 0.00 0.00 39.03 3.25
1964 2248 5.551233 TGCTGCTTAGATCCAATATGGTAC 58.449 41.667 0.00 0.00 39.03 3.34
1978 2262 1.344065 TGGTACACACTACACCAGGG 58.656 55.000 0.00 0.00 37.42 4.45
1979 2263 1.345063 GGTACACACTACACCAGGGT 58.655 55.000 0.00 0.00 43.76 4.34
2070 2465 1.954146 GAAATAGCCGATCGCCGCA 60.954 57.895 16.88 5.37 38.78 5.69
2084 2479 1.250840 GCCGCACCTTTTTCTCCCAT 61.251 55.000 0.00 0.00 0.00 4.00
2097 2492 8.320617 CCTTTTTCTCCCATTTATCCAAAATCA 58.679 33.333 0.00 0.00 0.00 2.57
2167 2563 0.320334 ATTGCACGTCACACGATCCA 60.320 50.000 2.48 0.00 46.05 3.41
2250 2857 5.051816 CCAAAGAGTACCAGTTGACGTTTA 58.948 41.667 0.00 0.00 0.00 2.01
2262 2876 7.083858 CCAGTTGACGTTTATTTCATTGACAT 58.916 34.615 0.00 0.00 0.00 3.06
2379 3000 1.202440 TCGTTGAGTAGTTGGCACGTT 60.202 47.619 0.00 0.00 0.00 3.99
2419 3045 3.499537 CACGTGATTGGGATATGGATGTG 59.500 47.826 10.90 0.00 0.00 3.21
2437 3063 3.170717 TGTGTTTGCCCTAGCTACTACT 58.829 45.455 0.00 0.00 40.80 2.57
2443 3069 2.106857 TGCCCTAGCTACTACTCTCTCC 59.893 54.545 0.00 0.00 40.80 3.71
2444 3070 2.106857 GCCCTAGCTACTACTCTCTCCA 59.893 54.545 0.00 0.00 35.50 3.86
2445 3071 3.245122 GCCCTAGCTACTACTCTCTCCAT 60.245 52.174 0.00 0.00 35.50 3.41
2447 3073 5.390387 CCCTAGCTACTACTCTCTCCATTT 58.610 45.833 0.00 0.00 0.00 2.32
2448 3074 5.475564 CCCTAGCTACTACTCTCTCCATTTC 59.524 48.000 0.00 0.00 0.00 2.17
2449 3075 6.065374 CCTAGCTACTACTCTCTCCATTTCA 58.935 44.000 0.00 0.00 0.00 2.69
2450 3076 6.719370 CCTAGCTACTACTCTCTCCATTTCAT 59.281 42.308 0.00 0.00 0.00 2.57
2451 3077 7.885922 CCTAGCTACTACTCTCTCCATTTCATA 59.114 40.741 0.00 0.00 0.00 2.15
2452 3078 9.461312 CTAGCTACTACTCTCTCCATTTCATAT 57.539 37.037 0.00 0.00 0.00 1.78
2453 3079 8.719645 AGCTACTACTCTCTCCATTTCATATT 57.280 34.615 0.00 0.00 0.00 1.28
2458 3084 8.788806 ACTACTCTCTCCATTTCATATTACTCG 58.211 37.037 0.00 0.00 0.00 4.18
2459 3085 7.589958 ACTCTCTCCATTTCATATTACTCGT 57.410 36.000 0.00 0.00 0.00 4.18
2461 3087 6.669278 TCTCTCCATTTCATATTACTCGTCG 58.331 40.000 0.00 0.00 0.00 5.12
2462 3088 5.220381 TCTCCATTTCATATTACTCGTCGC 58.780 41.667 0.00 0.00 0.00 5.19
2463 3089 5.009710 TCTCCATTTCATATTACTCGTCGCT 59.990 40.000 0.00 0.00 0.00 4.93
2464 3090 4.982295 TCCATTTCATATTACTCGTCGCTG 59.018 41.667 0.00 0.00 0.00 5.18
2466 3092 5.635280 CCATTTCATATTACTCGTCGCTGAT 59.365 40.000 0.00 0.00 0.00 2.90
2467 3093 6.146184 CCATTTCATATTACTCGTCGCTGATT 59.854 38.462 0.00 0.00 0.00 2.57
2468 3094 7.307396 CCATTTCATATTACTCGTCGCTGATTT 60.307 37.037 0.00 0.00 0.00 2.17
2470 3096 7.853377 TTCATATTACTCGTCGCTGATTTAG 57.147 36.000 0.00 0.00 0.00 1.85
2472 3098 8.091385 TCATATTACTCGTCGCTGATTTAGTA 57.909 34.615 0.00 0.00 0.00 1.82
2473 3099 8.013947 TCATATTACTCGTCGCTGATTTAGTAC 58.986 37.037 0.00 0.00 0.00 2.73
2474 3100 5.550232 TTACTCGTCGCTGATTTAGTACA 57.450 39.130 0.00 0.00 0.00 2.90
2475 3101 4.430137 ACTCGTCGCTGATTTAGTACAA 57.570 40.909 0.00 0.00 0.00 2.41
2476 3102 4.164294 ACTCGTCGCTGATTTAGTACAAC 58.836 43.478 0.00 0.00 0.00 3.32
2477 3103 3.504863 TCGTCGCTGATTTAGTACAACC 58.495 45.455 0.00 0.00 0.00 3.77
2478 3104 3.057386 TCGTCGCTGATTTAGTACAACCA 60.057 43.478 0.00 0.00 0.00 3.67
2479 3105 3.863424 CGTCGCTGATTTAGTACAACCAT 59.137 43.478 0.00 0.00 0.00 3.55
2480 3106 4.259810 CGTCGCTGATTTAGTACAACCATG 60.260 45.833 0.00 0.00 0.00 3.66
2481 3107 4.868171 GTCGCTGATTTAGTACAACCATGA 59.132 41.667 0.00 0.00 0.00 3.07
2482 3108 5.005779 GTCGCTGATTTAGTACAACCATGAG 59.994 44.000 0.00 0.00 0.00 2.90
2483 3109 4.260375 CGCTGATTTAGTACAACCATGAGC 60.260 45.833 0.00 0.00 0.00 4.26
2484 3110 4.635765 GCTGATTTAGTACAACCATGAGCA 59.364 41.667 0.00 0.00 0.00 4.26
2485 3111 5.297776 GCTGATTTAGTACAACCATGAGCAT 59.702 40.000 0.00 0.00 0.00 3.79
2486 3112 6.483307 GCTGATTTAGTACAACCATGAGCATA 59.517 38.462 0.00 0.00 0.00 3.14
2487 3113 7.173907 GCTGATTTAGTACAACCATGAGCATAT 59.826 37.037 0.00 0.00 0.00 1.78
2488 3114 9.710900 CTGATTTAGTACAACCATGAGCATATA 57.289 33.333 0.00 0.00 0.00 0.86
2489 3115 9.489084 TGATTTAGTACAACCATGAGCATATAC 57.511 33.333 0.00 0.00 0.00 1.47
2490 3116 9.489084 GATTTAGTACAACCATGAGCATATACA 57.511 33.333 0.00 0.00 0.00 2.29
2491 3117 9.845740 ATTTAGTACAACCATGAGCATATACAA 57.154 29.630 0.00 0.00 0.00 2.41
2492 3118 9.845740 TTTAGTACAACCATGAGCATATACAAT 57.154 29.630 0.00 0.00 0.00 2.71
2553 3179 9.551734 CATGGAGAAAGAACTTATGATGTGATA 57.448 33.333 0.00 0.00 0.00 2.15
2586 3482 2.118228 TGTGCTCGAAACACATTTGC 57.882 45.000 15.01 0.00 42.88 3.68
2590 3486 3.305629 GTGCTCGAAACACATTTGCAAAA 59.694 39.130 17.19 0.00 37.96 2.44
2591 3487 3.305629 TGCTCGAAACACATTTGCAAAAC 59.694 39.130 17.19 1.70 0.00 2.43
2633 3529 8.668353 CAAGACATGTGTTGTAAGCTATACAAT 58.332 33.333 23.81 7.13 39.18 2.71
2761 6554 3.967886 CGACATGCTCGGAACCTAT 57.032 52.632 9.07 0.00 38.87 2.57
3013 6806 2.658707 GACGCTCGTGTTGCACCTC 61.659 63.158 0.00 0.00 0.00 3.85
3085 6878 1.298014 GCTGGTGCTTAGCCTGAGT 59.702 57.895 0.29 0.00 35.15 3.41
3377 7170 9.491406 TGGGTTGTAACTTGTACTTATATAGGA 57.509 33.333 0.00 0.00 0.00 2.94
3378 7171 9.978044 GGGTTGTAACTTGTACTTATATAGGAG 57.022 37.037 0.00 0.00 0.00 3.69
3395 7197 4.965200 AGGAGTGCCTAGTAATCAATCC 57.035 45.455 8.82 8.82 44.74 3.01
3753 7609 0.531311 AAAGAGTTTCCGACGCCGTT 60.531 50.000 0.00 0.00 0.00 4.44
3876 7968 9.747293 GGTACTATCTTTATTGTTGACTACTCC 57.253 37.037 0.00 0.00 0.00 3.85
3877 7969 9.747293 GTACTATCTTTATTGTTGACTACTCCC 57.253 37.037 0.00 0.00 0.00 4.30
3878 7970 8.611051 ACTATCTTTATTGTTGACTACTCCCT 57.389 34.615 0.00 0.00 0.00 4.20
3879 7971 8.697292 ACTATCTTTATTGTTGACTACTCCCTC 58.303 37.037 0.00 0.00 0.00 4.30
3880 7972 6.295719 TCTTTATTGTTGACTACTCCCTCC 57.704 41.667 0.00 0.00 0.00 4.30
3881 7973 4.730949 TTATTGTTGACTACTCCCTCCG 57.269 45.455 0.00 0.00 0.00 4.63
3882 7974 2.005370 TTGTTGACTACTCCCTCCGT 57.995 50.000 0.00 0.00 0.00 4.69
3883 7975 1.542492 TGTTGACTACTCCCTCCGTC 58.458 55.000 0.00 0.00 0.00 4.79
3884 7976 1.075050 TGTTGACTACTCCCTCCGTCT 59.925 52.381 0.00 0.00 0.00 4.18
3885 7977 1.744522 GTTGACTACTCCCTCCGTCTC 59.255 57.143 0.00 0.00 0.00 3.36
3886 7978 0.989602 TGACTACTCCCTCCGTCTCA 59.010 55.000 0.00 0.00 0.00 3.27
3887 7979 1.564818 TGACTACTCCCTCCGTCTCAT 59.435 52.381 0.00 0.00 0.00 2.90
3888 7980 2.775960 TGACTACTCCCTCCGTCTCATA 59.224 50.000 0.00 0.00 0.00 2.15
3889 7981 3.201487 TGACTACTCCCTCCGTCTCATAA 59.799 47.826 0.00 0.00 0.00 1.90
3890 7982 4.141228 TGACTACTCCCTCCGTCTCATAAT 60.141 45.833 0.00 0.00 0.00 1.28
3891 7983 4.145807 ACTACTCCCTCCGTCTCATAATG 58.854 47.826 0.00 0.00 0.00 1.90
3892 7984 3.033659 ACTCCCTCCGTCTCATAATGT 57.966 47.619 0.00 0.00 0.00 2.71
3893 7985 4.180377 ACTCCCTCCGTCTCATAATGTA 57.820 45.455 0.00 0.00 0.00 2.29
3894 7986 4.145807 ACTCCCTCCGTCTCATAATGTAG 58.854 47.826 0.00 0.00 0.00 2.74
3895 7987 4.141228 ACTCCCTCCGTCTCATAATGTAGA 60.141 45.833 0.00 0.00 0.00 2.59
3896 7988 4.142790 TCCCTCCGTCTCATAATGTAGAC 58.857 47.826 0.00 0.00 39.00 2.59
3907 7999 9.901724 GTCTCATAATGTAGACGTTTATGTTTG 57.098 33.333 13.75 8.05 33.38 2.93
3908 8000 8.600625 TCTCATAATGTAGACGTTTATGTTTGC 58.399 33.333 13.75 0.00 0.00 3.68
3909 8001 7.690228 TCATAATGTAGACGTTTATGTTTGCC 58.310 34.615 13.75 0.00 0.00 4.52
3910 8002 5.950758 AATGTAGACGTTTATGTTTGCCA 57.049 34.783 0.00 0.00 0.00 4.92
3911 8003 5.950758 ATGTAGACGTTTATGTTTGCCAA 57.049 34.783 0.00 0.00 0.00 4.52
3912 8004 5.752892 TGTAGACGTTTATGTTTGCCAAA 57.247 34.783 0.00 0.00 0.00 3.28
3913 8005 6.132791 TGTAGACGTTTATGTTTGCCAAAA 57.867 33.333 0.00 0.00 0.00 2.44
3914 8006 6.561614 TGTAGACGTTTATGTTTGCCAAAAA 58.438 32.000 0.00 0.00 0.00 1.94
3993 8085 5.184479 AGTGCTCATGTCAACTGCATTATTT 59.816 36.000 0.00 0.00 36.04 1.40
4038 8130 5.296151 TGATTCCAATTCTAGTGCTAGGG 57.704 43.478 6.41 0.78 34.06 3.53
4039 8131 4.968719 TGATTCCAATTCTAGTGCTAGGGA 59.031 41.667 6.41 2.91 34.06 4.20
4044 8136 7.446106 TCCAATTCTAGTGCTAGGGAAATTA 57.554 36.000 6.41 0.00 34.06 1.40
4076 8168 3.876914 TGAAACATTGTGTCGAAGCTCTT 59.123 39.130 2.59 0.00 0.00 2.85
4080 8172 4.848757 ACATTGTGTCGAAGCTCTTTTTC 58.151 39.130 0.00 0.00 0.00 2.29
4084 8176 3.687212 TGTGTCGAAGCTCTTTTTCAACA 59.313 39.130 0.00 0.00 0.00 3.33
4085 8177 4.335315 TGTGTCGAAGCTCTTTTTCAACAT 59.665 37.500 0.00 0.00 0.00 2.71
4125 8217 7.977789 TTGAACTTTACTGACATGCATAGAA 57.022 32.000 0.00 0.00 0.00 2.10
4596 8688 1.571460 GTCACTTGCTTGCTCACCG 59.429 57.895 0.00 0.00 0.00 4.94
4723 8815 2.522271 CCTTCAGGTAGAGGAGGCC 58.478 63.158 0.00 0.00 0.00 5.19
4806 8898 3.313012 TGATAACTAATGGATCGCCGG 57.687 47.619 0.00 0.00 36.79 6.13
4835 8927 6.753744 GTCATAATTGCTTTGGGTTTGAGATC 59.246 38.462 0.00 0.00 0.00 2.75
4892 8984 6.150641 ACAGAATTCATGTGACCTGATTCTTG 59.849 38.462 8.44 9.39 0.00 3.02
4937 9029 2.159382 ACTAATTTGGTTGGCCTGACG 58.841 47.619 3.32 0.00 35.27 4.35
5001 9093 8.259872 GCAAGTTAGATTTTTCTTTCGTTTGAC 58.740 33.333 0.00 0.00 0.00 3.18
5215 9309 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
5216 9310 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
5217 9311 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
5218 9312 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
5219 9313 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
5220 9314 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
5221 9315 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
5222 9316 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
5223 9317 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
5224 9318 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
5225 9319 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
5226 9320 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
5227 9321 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
5228 9322 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
5229 9323 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
5230 9324 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
5231 9325 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
5232 9326 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
5233 9327 5.136828 TCTCTCTCTCTCTCTCTCTCTCTC 58.863 50.000 0.00 0.00 0.00 3.20
5234 9328 5.103728 TCTCTCTCTCTCTCTCTCTCTCTCT 60.104 48.000 0.00 0.00 0.00 3.10
5235 9329 4.892345 TCTCTCTCTCTCTCTCTCTCTCTG 59.108 50.000 0.00 0.00 0.00 3.35
5236 9330 4.614475 TCTCTCTCTCTCTCTCTCTCTGT 58.386 47.826 0.00 0.00 0.00 3.41
5237 9331 4.646945 TCTCTCTCTCTCTCTCTCTCTGTC 59.353 50.000 0.00 0.00 0.00 3.51
5238 9332 4.614475 TCTCTCTCTCTCTCTCTCTGTCT 58.386 47.826 0.00 0.00 0.00 3.41
5239 9333 4.403752 TCTCTCTCTCTCTCTCTCTGTCTG 59.596 50.000 0.00 0.00 0.00 3.51
5240 9334 4.096681 TCTCTCTCTCTCTCTCTGTCTGT 58.903 47.826 0.00 0.00 0.00 3.41
5241 9335 4.081476 TCTCTCTCTCTCTCTCTGTCTGTG 60.081 50.000 0.00 0.00 0.00 3.66
5279 9388 8.564574 GTGTGTGTGTGAAAATAGGATTCTTTA 58.435 33.333 0.00 0.00 0.00 1.85
5319 9428 9.638176 AATTATCATGGATTGAGAGCTAAACTT 57.362 29.630 0.00 0.00 37.89 2.66
5324 9433 5.003804 TGGATTGAGAGCTAAACTTGAACC 58.996 41.667 0.00 0.00 0.00 3.62
5329 9438 6.169557 TGAGAGCTAAACTTGAACCTTGTA 57.830 37.500 0.00 0.00 0.00 2.41
5336 9445 9.313118 AGCTAAACTTGAACCTTGTAAATTTTG 57.687 29.630 0.00 0.00 0.00 2.44
5372 9481 8.932610 AGTACAAGATGTAGAATCAGATGGAAT 58.067 33.333 0.00 0.00 32.84 3.01
5461 9574 8.582437 AGCCATTTTCTCATTATTCATGTATGG 58.418 33.333 0.00 0.00 34.06 2.74
5462 9575 8.362639 GCCATTTTCTCATTATTCATGTATGGT 58.637 33.333 0.00 0.00 34.06 3.55
5468 9581 9.685276 TTCTCATTATTCATGTATGGTTCAAGT 57.315 29.630 0.00 0.00 34.06 3.16
5469 9582 9.685276 TCTCATTATTCATGTATGGTTCAAGTT 57.315 29.630 0.00 0.00 34.06 2.66
5475 9588 7.447374 TTCATGTATGGTTCAAGTTAGTTGG 57.553 36.000 0.00 0.00 36.71 3.77
5476 9589 6.774673 TCATGTATGGTTCAAGTTAGTTGGA 58.225 36.000 0.00 0.00 36.71 3.53
5477 9590 6.653320 TCATGTATGGTTCAAGTTAGTTGGAC 59.347 38.462 2.67 2.67 43.35 4.02
5483 9596 5.169836 GTTCAAGTTAGTTGGACCTGTTG 57.830 43.478 0.00 0.00 38.61 3.33
5484 9597 4.764050 TCAAGTTAGTTGGACCTGTTGA 57.236 40.909 0.00 0.00 36.71 3.18
5485 9598 5.105567 TCAAGTTAGTTGGACCTGTTGAA 57.894 39.130 0.00 0.00 36.71 2.69
5486 9599 4.879545 TCAAGTTAGTTGGACCTGTTGAAC 59.120 41.667 0.00 0.00 36.71 3.18
5487 9600 4.497291 AGTTAGTTGGACCTGTTGAACA 57.503 40.909 0.00 0.00 0.00 3.18
5488 9601 4.196971 AGTTAGTTGGACCTGTTGAACAC 58.803 43.478 0.00 0.00 0.00 3.32
5489 9602 2.052782 AGTTGGACCTGTTGAACACC 57.947 50.000 0.00 0.00 0.00 4.16
5490 9603 1.029681 GTTGGACCTGTTGAACACCC 58.970 55.000 0.00 0.00 0.00 4.61
5491 9604 0.464735 TTGGACCTGTTGAACACCCG 60.465 55.000 0.00 0.00 0.00 5.28
5492 9605 2.258726 GGACCTGTTGAACACCCGC 61.259 63.158 0.00 0.00 0.00 6.13
5493 9606 1.525077 GACCTGTTGAACACCCGCA 60.525 57.895 0.00 0.00 0.00 5.69
5494 9607 1.077357 ACCTGTTGAACACCCGCAA 60.077 52.632 0.00 0.00 0.00 4.85
5495 9608 0.681564 ACCTGTTGAACACCCGCAAA 60.682 50.000 0.00 0.00 0.00 3.68
5496 9609 0.457851 CCTGTTGAACACCCGCAAAA 59.542 50.000 0.00 0.00 0.00 2.44
5497 9610 1.134965 CCTGTTGAACACCCGCAAAAA 60.135 47.619 0.00 0.00 0.00 1.94
5544 9657 2.288666 TGACCAACTTGTCAGTCTTGC 58.711 47.619 0.00 0.00 40.22 4.01
5551 9664 0.843309 TTGTCAGTCTTGCCCTTCCA 59.157 50.000 0.00 0.00 0.00 3.53
5552 9665 1.067295 TGTCAGTCTTGCCCTTCCAT 58.933 50.000 0.00 0.00 0.00 3.41
5553 9666 1.271543 TGTCAGTCTTGCCCTTCCATG 60.272 52.381 0.00 0.00 0.00 3.66
5554 9667 0.329261 TCAGTCTTGCCCTTCCATGG 59.671 55.000 4.97 4.97 0.00 3.66
5556 9669 1.075601 AGTCTTGCCCTTCCATGGAA 58.924 50.000 25.53 25.53 0.00 3.53
5567 9680 4.559862 CTTCCATGGAAGGAACAGTACT 57.440 45.455 37.26 0.00 45.60 2.73
5592 9724 1.875963 CACATGGGCCGAACAGAAC 59.124 57.895 0.00 0.00 0.00 3.01
5597 9729 2.642154 TGGGCCGAACAGAACTAAAA 57.358 45.000 0.00 0.00 0.00 1.52
5599 9731 3.492337 TGGGCCGAACAGAACTAAAAAT 58.508 40.909 0.00 0.00 0.00 1.82
5600 9732 3.504520 TGGGCCGAACAGAACTAAAAATC 59.495 43.478 0.00 0.00 0.00 2.17
5601 9733 3.756963 GGGCCGAACAGAACTAAAAATCT 59.243 43.478 0.00 0.00 0.00 2.40
5602 9734 4.142665 GGGCCGAACAGAACTAAAAATCTC 60.143 45.833 0.00 0.00 0.00 2.75
5603 9735 4.695928 GGCCGAACAGAACTAAAAATCTCT 59.304 41.667 0.00 0.00 0.00 3.10
5607 9739 6.400091 CCGAACAGAACTAAAAATCTCTGTCG 60.400 42.308 4.19 9.04 45.96 4.35
5608 9740 6.144080 CGAACAGAACTAAAAATCTCTGTCGT 59.856 38.462 4.19 0.00 45.96 4.34
5643 9775 2.436173 GGAGTTCCCAGGTCTTCTATGG 59.564 54.545 0.00 0.00 34.14 2.74
5647 9779 1.839894 CCAGGTCTTCTATGGGGCC 59.160 63.158 0.00 0.00 0.00 5.80
5650 9782 0.400670 AGGTCTTCTATGGGGCCTCC 60.401 60.000 0.00 0.72 0.00 4.30
5659 9791 0.327480 ATGGGGCCTCCTGTGTGATA 60.327 55.000 0.00 0.00 36.20 2.15
5685 9817 7.129457 TGGATATGTCATATAAGAGGGATGC 57.871 40.000 5.29 0.00 0.00 3.91
5686 9818 6.100279 TGGATATGTCATATAAGAGGGATGCC 59.900 42.308 5.29 0.00 0.00 4.40
5687 9819 3.961480 TGTCATATAAGAGGGATGCCG 57.039 47.619 0.00 0.00 0.00 5.69
5693 9825 0.107703 TAAGAGGGATGCCGCACAAG 60.108 55.000 10.12 0.00 0.00 3.16
5711 9843 5.468746 GCACAAGGGGTTTTAAGGATTTTTC 59.531 40.000 0.00 0.00 0.00 2.29
5712 9844 6.687901 GCACAAGGGGTTTTAAGGATTTTTCT 60.688 38.462 0.00 0.00 0.00 2.52
5713 9845 7.279615 CACAAGGGGTTTTAAGGATTTTTCTT 58.720 34.615 0.00 0.00 0.00 2.52
5714 9846 7.773224 CACAAGGGGTTTTAAGGATTTTTCTTT 59.227 33.333 0.00 0.00 0.00 2.52
5715 9847 8.333235 ACAAGGGGTTTTAAGGATTTTTCTTTT 58.667 29.630 0.00 0.00 0.00 2.27
5716 9848 8.620416 CAAGGGGTTTTAAGGATTTTTCTTTTG 58.380 33.333 0.00 0.00 0.00 2.44
5738 9870 9.780186 TTTTGTTTCCTTTTCCTTTCTGTTTAA 57.220 25.926 0.00 0.00 0.00 1.52
5762 9894 6.492254 ACTAGTTTTAGCCAGTTTTGTTTCG 58.508 36.000 0.00 0.00 0.00 3.46
5770 9902 8.705048 TTAGCCAGTTTTGTTTCGTTTAAAAT 57.295 26.923 0.00 0.00 0.00 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.080356 CCTTGAACTATTCCAGGGATGTCA 60.080 45.833 0.00 0.00 38.57 3.58
3 4 4.455606 GTCCTTGAACTATTCCAGGGATG 58.544 47.826 8.41 0.00 41.62 3.51
5 6 2.844348 GGTCCTTGAACTATTCCAGGGA 59.156 50.000 8.41 0.00 41.62 4.20
6 7 2.846827 AGGTCCTTGAACTATTCCAGGG 59.153 50.000 8.41 0.00 41.62 4.45
8 9 5.187967 ACTGTAGGTCCTTGAACTATTCCAG 59.812 44.000 0.00 4.59 34.19 3.86
9 10 5.046591 CACTGTAGGTCCTTGAACTATTCCA 60.047 44.000 0.00 0.00 34.19 3.53
11 12 4.870991 GCACTGTAGGTCCTTGAACTATTC 59.129 45.833 0.00 0.00 34.19 1.75
12 13 4.286032 TGCACTGTAGGTCCTTGAACTATT 59.714 41.667 0.00 0.00 34.19 1.73
13 14 3.838317 TGCACTGTAGGTCCTTGAACTAT 59.162 43.478 0.00 0.00 34.19 2.12
14 15 3.006537 GTGCACTGTAGGTCCTTGAACTA 59.993 47.826 10.32 0.00 29.72 2.24
15 16 2.047061 TGCACTGTAGGTCCTTGAACT 58.953 47.619 0.00 0.00 32.68 3.01
16 17 2.143925 GTGCACTGTAGGTCCTTGAAC 58.856 52.381 10.32 0.00 0.00 3.18
17 18 2.047061 AGTGCACTGTAGGTCCTTGAA 58.953 47.619 20.97 0.00 0.00 2.69
18 19 1.717032 AGTGCACTGTAGGTCCTTGA 58.283 50.000 20.97 0.00 0.00 3.02
19 20 2.224281 TGAAGTGCACTGTAGGTCCTTG 60.224 50.000 22.49 0.00 0.00 3.61
20 21 2.047061 TGAAGTGCACTGTAGGTCCTT 58.953 47.619 22.49 0.00 0.00 3.36
21 22 1.344763 GTGAAGTGCACTGTAGGTCCT 59.655 52.381 22.49 0.61 44.27 3.85
22 23 1.797025 GTGAAGTGCACTGTAGGTCC 58.203 55.000 22.49 4.36 44.27 4.46
56 57 8.373981 CCACCTGATCATCTACTATTCATCTTT 58.626 37.037 0.00 0.00 0.00 2.52
57 58 7.038445 CCCACCTGATCATCTACTATTCATCTT 60.038 40.741 0.00 0.00 0.00 2.40
58 59 6.440010 CCCACCTGATCATCTACTATTCATCT 59.560 42.308 0.00 0.00 0.00 2.90
59 60 6.212388 ACCCACCTGATCATCTACTATTCATC 59.788 42.308 0.00 0.00 0.00 2.92
60 61 6.013898 CACCCACCTGATCATCTACTATTCAT 60.014 42.308 0.00 0.00 0.00 2.57
61 62 5.305386 CACCCACCTGATCATCTACTATTCA 59.695 44.000 0.00 0.00 0.00 2.57
62 63 5.788450 CACCCACCTGATCATCTACTATTC 58.212 45.833 0.00 0.00 0.00 1.75
63 64 4.040952 GCACCCACCTGATCATCTACTATT 59.959 45.833 0.00 0.00 0.00 1.73
64 65 3.580458 GCACCCACCTGATCATCTACTAT 59.420 47.826 0.00 0.00 0.00 2.12
65 66 2.965831 GCACCCACCTGATCATCTACTA 59.034 50.000 0.00 0.00 0.00 1.82
66 67 1.765314 GCACCCACCTGATCATCTACT 59.235 52.381 0.00 0.00 0.00 2.57
67 68 1.765314 AGCACCCACCTGATCATCTAC 59.235 52.381 0.00 0.00 0.00 2.59
68 69 1.764723 CAGCACCCACCTGATCATCTA 59.235 52.381 0.00 0.00 32.03 1.98
116 117 2.036217 CTGCCCATCTTTGCTTGTTTCA 59.964 45.455 0.00 0.00 0.00 2.69
119 120 1.999648 TCTGCCCATCTTTGCTTGTT 58.000 45.000 0.00 0.00 0.00 2.83
122 123 2.494870 GTGAATCTGCCCATCTTTGCTT 59.505 45.455 0.00 0.00 0.00 3.91
145 146 1.139654 TGTATGCAGCTCAGGGTGATC 59.860 52.381 0.00 0.00 42.91 2.92
146 147 1.206878 TGTATGCAGCTCAGGGTGAT 58.793 50.000 0.00 0.00 42.91 3.06
147 148 1.134310 CATGTATGCAGCTCAGGGTGA 60.134 52.381 0.00 0.00 42.91 4.02
175 178 1.600636 TCAACCAAGCCAGCTTCGG 60.601 57.895 15.10 15.10 33.42 4.30
176 179 1.576421 GTCAACCAAGCCAGCTTCG 59.424 57.895 0.90 0.00 33.42 3.79
198 201 0.825010 GGTGGATCCCCATCATGCAC 60.825 60.000 9.90 0.00 45.68 4.57
215 218 2.190398 TACATGCAGGAGGTATGGGT 57.810 50.000 4.84 0.00 43.15 4.51
222 232 3.219176 ACCAATCATACATGCAGGAGG 57.781 47.619 4.84 0.00 0.00 4.30
248 258 3.685265 GCACATGGGTATCTCACATCCAA 60.685 47.826 0.00 0.00 38.23 3.53
268 278 3.687321 GAAGATCCGGCCAGCAGCA 62.687 63.158 2.24 0.00 46.50 4.41
288 298 1.215382 GGCCGCCCAACATCTTTTC 59.785 57.895 0.00 0.00 0.00 2.29
290 300 0.679960 GTAGGCCGCCCAACATCTTT 60.680 55.000 5.55 0.00 0.00 2.52
299 309 2.076597 ATAATTGGGGTAGGCCGCCC 62.077 60.000 24.97 24.97 46.08 6.13
302 312 1.064825 AGGATAATTGGGGTAGGCCG 58.935 55.000 0.00 0.00 34.97 6.13
345 356 1.292223 CCACCCGACGACTTGTGAT 59.708 57.895 0.00 0.00 0.00 3.06
476 507 1.195115 TCCCTCTGTCCAGTATGCAC 58.805 55.000 0.00 0.00 31.97 4.57
504 535 1.304962 AGGGACCCGAAAAATGCCC 60.305 57.895 4.40 0.00 35.79 5.36
720 773 2.186125 GCCTACACGTACCTGCCC 59.814 66.667 0.00 0.00 0.00 5.36
731 784 2.745785 CGGATTTTGCGCGCCTACA 61.746 57.895 30.77 10.33 0.00 2.74
751 804 2.854777 GCACGCGGATATGAGATATGAC 59.145 50.000 12.47 0.00 0.00 3.06
774 827 5.127194 TGGTGTCATACTTACTCCATGAGAC 59.873 44.000 0.00 3.28 40.42 3.36
804 857 0.814812 GTCTCTAGCTAGCCCGTCGT 60.815 60.000 16.35 0.00 0.00 4.34
850 903 6.927416 TGTGTATATATAGTAACGGCTTGGG 58.073 40.000 0.00 0.00 0.00 4.12
858 911 7.201145 CCAGGCGGATGTGTATATATAGTAAC 58.799 42.308 0.00 0.00 0.00 2.50
877 933 1.227263 CTGTTATCGTCCCCAGGCG 60.227 63.158 0.00 0.00 0.00 5.52
904 960 4.539083 TGTGTGTTCCGCCGTGCT 62.539 61.111 0.00 0.00 0.00 4.40
905 961 4.307908 GTGTGTGTTCCGCCGTGC 62.308 66.667 0.00 0.00 0.00 5.34
906 962 3.645975 GGTGTGTGTTCCGCCGTG 61.646 66.667 0.00 0.00 0.00 4.94
907 963 4.922026 GGGTGTGTGTTCCGCCGT 62.922 66.667 0.00 0.00 33.14 5.68
908 964 4.920112 TGGGTGTGTGTTCCGCCG 62.920 66.667 0.00 0.00 33.14 6.46
909 965 3.284449 GTGGGTGTGTGTTCCGCC 61.284 66.667 0.00 0.00 0.00 6.13
919 975 1.692749 AGTGTGGGAGTGTGGGTGT 60.693 57.895 0.00 0.00 0.00 4.16
922 978 1.121407 TGAGAGTGTGGGAGTGTGGG 61.121 60.000 0.00 0.00 0.00 4.61
966 1022 3.708220 GACAAGAGGCTCGGCTCGG 62.708 68.421 9.22 12.55 0.00 4.63
968 1024 1.038130 TAGGACAAGAGGCTCGGCTC 61.038 60.000 9.22 12.08 0.00 4.70
1098 1154 2.733301 AGCATCCCGAGCTCGATG 59.267 61.111 36.59 30.20 38.01 3.84
1266 1322 0.457166 GTGCGTGAGTGCGTACCATA 60.457 55.000 0.00 0.00 40.62 2.74
1309 1370 6.385537 AGATTTTACACGTACACGATTGTC 57.614 37.500 9.04 0.00 43.02 3.18
1328 1404 4.710324 TGAGTGGTTTGGTTACGAAGATT 58.290 39.130 0.00 0.00 0.00 2.40
1357 1433 4.816385 TCTATGAACCGAAATGGAGAATGC 59.184 41.667 0.00 0.00 42.00 3.56
1381 1457 9.856162 AACCCAGAAAAAGAAAGTATTGTACTA 57.144 29.630 0.00 0.00 38.26 1.82
1382 1458 8.762481 AACCCAGAAAAAGAAAGTATTGTACT 57.238 30.769 0.00 0.00 41.73 2.73
1412 1488 6.650807 ACGTGTGACTCAAAATACATGAGATT 59.349 34.615 10.27 0.00 45.74 2.40
1483 1562 7.648039 AAAACAGGTTTTCCACAGTATGTTA 57.352 32.000 4.38 0.00 42.48 2.41
1519 1598 7.433719 CGGTTCCGCAAATATTTCATGATTTTA 59.566 33.333 0.00 0.00 0.00 1.52
1520 1599 6.255453 CGGTTCCGCAAATATTTCATGATTTT 59.745 34.615 0.00 0.00 0.00 1.82
1521 1600 5.748152 CGGTTCCGCAAATATTTCATGATTT 59.252 36.000 0.00 0.00 0.00 2.17
1524 1603 3.942115 TCGGTTCCGCAAATATTTCATGA 59.058 39.130 6.35 0.00 0.00 3.07
1526 1605 4.974368 TTCGGTTCCGCAAATATTTCAT 57.026 36.364 6.35 0.00 0.00 2.57
1540 1619 4.552767 CGAATGCATGGAGTTATTCGGTTC 60.553 45.833 11.48 0.00 44.70 3.62
1555 1634 2.954318 AGGCTGAAAATAGCGAATGCAT 59.046 40.909 0.00 0.00 46.23 3.96
1563 1646 7.024768 CGAGTACTATCTAGGCTGAAAATAGC 58.975 42.308 0.00 0.00 42.94 2.97
1571 1654 3.749088 CAGACCGAGTACTATCTAGGCTG 59.251 52.174 0.00 0.00 34.34 4.85
1572 1655 3.391955 ACAGACCGAGTACTATCTAGGCT 59.608 47.826 0.00 0.00 34.34 4.58
1573 1656 3.742385 ACAGACCGAGTACTATCTAGGC 58.258 50.000 0.00 0.00 34.34 3.93
1574 1657 5.851720 TGTACAGACCGAGTACTATCTAGG 58.148 45.833 0.00 0.00 41.76 3.02
1575 1658 6.747125 TCTGTACAGACCGAGTACTATCTAG 58.253 44.000 21.74 0.00 41.76 2.43
1576 1659 6.239261 CCTCTGTACAGACCGAGTACTATCTA 60.239 46.154 21.74 0.00 41.76 1.98
1577 1660 5.453621 CCTCTGTACAGACCGAGTACTATCT 60.454 48.000 21.74 0.00 41.76 1.98
1578 1661 4.751098 CCTCTGTACAGACCGAGTACTATC 59.249 50.000 21.74 0.00 41.76 2.08
1580 1663 3.118482 CCCTCTGTACAGACCGAGTACTA 60.118 52.174 21.74 0.00 41.76 1.82
1581 1664 2.355920 CCCTCTGTACAGACCGAGTACT 60.356 54.545 21.74 0.00 41.76 2.73
1582 1665 2.015587 CCCTCTGTACAGACCGAGTAC 58.984 57.143 21.74 0.00 41.63 2.73
1583 1666 1.911357 TCCCTCTGTACAGACCGAGTA 59.089 52.381 21.74 0.00 35.69 2.59
1584 1667 0.697079 TCCCTCTGTACAGACCGAGT 59.303 55.000 21.74 0.00 35.69 4.18
1586 1669 0.697079 ACTCCCTCTGTACAGACCGA 59.303 55.000 21.74 17.03 33.22 4.69
1588 1671 3.369242 AGTACTCCCTCTGTACAGACC 57.631 52.381 21.74 4.18 41.76 3.85
1589 1672 5.011586 AGAAAGTACTCCCTCTGTACAGAC 58.988 45.833 21.74 10.67 41.76 3.51
1590 1673 5.258216 AGAAAGTACTCCCTCTGTACAGA 57.742 43.478 23.80 23.80 41.76 3.41
1591 1674 5.986501 AAGAAAGTACTCCCTCTGTACAG 57.013 43.478 17.17 17.17 41.76 2.74
1592 1675 5.836898 TCAAAGAAAGTACTCCCTCTGTACA 59.163 40.000 0.00 0.00 41.76 2.90
1593 1676 6.157904 GTCAAAGAAAGTACTCCCTCTGTAC 58.842 44.000 0.00 0.00 40.19 2.90
1596 1741 4.238514 CGTCAAAGAAAGTACTCCCTCTG 58.761 47.826 0.00 0.00 0.00 3.35
1602 1747 3.427863 CGAACCCGTCAAAGAAAGTACTC 59.572 47.826 0.00 0.00 0.00 2.59
1613 1758 0.691904 ATAAACCCCGAACCCGTCAA 59.308 50.000 0.00 0.00 0.00 3.18
1616 1761 3.200605 AGAATAATAAACCCCGAACCCGT 59.799 43.478 0.00 0.00 0.00 5.28
1618 1763 5.163488 CCAAAGAATAATAAACCCCGAACCC 60.163 44.000 0.00 0.00 0.00 4.11
1619 1764 5.419788 ACCAAAGAATAATAAACCCCGAACC 59.580 40.000 0.00 0.00 0.00 3.62
1635 1780 6.553100 ACCAAAATGGAGATGTTACCAAAGAA 59.447 34.615 2.85 0.00 40.96 2.52
1639 1784 6.739331 AAACCAAAATGGAGATGTTACCAA 57.261 33.333 2.85 0.00 40.96 3.67
1640 1785 7.235079 TCTAAACCAAAATGGAGATGTTACCA 58.765 34.615 2.85 0.00 40.96 3.25
1641 1786 7.696992 TCTAAACCAAAATGGAGATGTTACC 57.303 36.000 2.85 0.00 40.96 2.85
1663 1917 7.327064 AGCCATGATGGAGAAAATACTATCT 57.673 36.000 17.22 0.00 40.96 1.98
1671 1925 6.436847 TGAACAATAAGCCATGATGGAGAAAA 59.563 34.615 17.22 0.00 40.96 2.29
1678 1932 4.987408 TGGTGAACAATAAGCCATGATG 57.013 40.909 0.00 0.00 0.00 3.07
1679 1933 7.844493 AATATGGTGAACAATAAGCCATGAT 57.156 32.000 0.00 0.00 39.89 2.45
1682 1936 7.769970 CCAAAAATATGGTGAACAATAAGCCAT 59.230 33.333 0.00 0.00 42.05 4.40
1683 1937 7.102346 CCAAAAATATGGTGAACAATAAGCCA 58.898 34.615 0.00 0.00 35.65 4.75
1684 1938 6.538381 CCCAAAAATATGGTGAACAATAAGCC 59.462 38.462 0.00 0.00 38.91 4.35
1685 1939 6.037062 GCCCAAAAATATGGTGAACAATAAGC 59.963 38.462 0.00 0.00 38.91 3.09
1686 1940 7.102346 TGCCCAAAAATATGGTGAACAATAAG 58.898 34.615 0.00 0.00 38.91 1.73
1688 1942 6.611613 TGCCCAAAAATATGGTGAACAATA 57.388 33.333 0.00 0.00 38.91 1.90
1693 1947 6.865834 AGTATTGCCCAAAAATATGGTGAA 57.134 33.333 0.00 0.00 38.91 3.18
1712 1969 7.916914 ACTAGTTAATTTGTCGGCAAAGTAT 57.083 32.000 21.55 11.55 46.30 2.12
1713 1970 8.830201 TTACTAGTTAATTTGTCGGCAAAGTA 57.170 30.769 21.05 19.34 46.30 2.24
1714 1971 7.733402 TTACTAGTTAATTTGTCGGCAAAGT 57.267 32.000 21.05 20.47 46.30 2.66
1715 1972 8.287503 ACTTTACTAGTTAATTTGTCGGCAAAG 58.712 33.333 21.05 7.55 39.89 2.77
1718 1975 6.347888 GCACTTTACTAGTTAATTTGTCGGCA 60.348 38.462 0.00 0.00 33.85 5.69
1719 1976 6.019762 GCACTTTACTAGTTAATTTGTCGGC 58.980 40.000 0.00 0.00 33.85 5.54
1721 1978 8.889000 GTTTGCACTTTACTAGTTAATTTGTCG 58.111 33.333 0.00 0.00 33.85 4.35
1723 1980 8.688151 TGGTTTGCACTTTACTAGTTAATTTGT 58.312 29.630 0.00 0.00 33.85 2.83
1724 1981 9.180678 CTGGTTTGCACTTTACTAGTTAATTTG 57.819 33.333 0.00 0.00 33.85 2.32
1740 1997 3.002862 TGTTTACGACATCTGGTTTGCAC 59.997 43.478 0.00 0.00 32.00 4.57
1742 1999 3.889196 TGTTTACGACATCTGGTTTGC 57.111 42.857 0.00 0.00 32.00 3.68
1756 2013 7.502561 AGAGCTTTCCCATGGTATAATGTTTAC 59.497 37.037 11.73 0.00 0.00 2.01
1757 2014 7.582719 AGAGCTTTCCCATGGTATAATGTTTA 58.417 34.615 11.73 0.00 0.00 2.01
1761 2018 6.966534 AAAGAGCTTTCCCATGGTATAATG 57.033 37.500 11.73 5.74 0.00 1.90
1796 2053 8.081025 TGGTTATACGCGAATATTACACATACA 58.919 33.333 15.93 0.00 0.00 2.29
1805 2062 3.244284 TGGCCTGGTTATACGCGAATATT 60.244 43.478 15.93 0.00 0.00 1.28
1811 2068 0.874607 GAGTGGCCTGGTTATACGCG 60.875 60.000 3.53 3.53 0.00 6.01
1813 2070 3.680842 GGAGTGGCCTGGTTATACG 57.319 57.895 3.32 0.00 0.00 3.06
1824 2081 2.996631 AGAATGTCATCAAGGAGTGGC 58.003 47.619 0.00 0.00 0.00 5.01
1845 2102 4.807304 CGCCTACTATGTAAACCGAAATGT 59.193 41.667 0.00 0.00 0.00 2.71
1858 2115 2.310233 ATTGCGCGCGCCTACTATG 61.310 57.895 46.85 10.83 41.09 2.23
1870 2131 7.431960 TCAATTTGAACATTACTATCATTGCGC 59.568 33.333 0.00 0.00 0.00 6.09
1900 2171 3.009723 CAAGTGAACGCCCACTAATGAT 58.990 45.455 10.19 0.00 45.82 2.45
1912 2183 1.269051 GCCCTTTTGGTCAAGTGAACG 60.269 52.381 0.00 0.00 38.10 3.95
1918 2189 3.070015 AGTGAAATGCCCTTTTGGTCAAG 59.930 43.478 0.00 0.00 38.10 3.02
1932 2203 4.397103 TGGATCTAAGCAGCAAGTGAAATG 59.603 41.667 0.00 0.00 0.00 2.32
1933 2204 4.592942 TGGATCTAAGCAGCAAGTGAAAT 58.407 39.130 0.00 0.00 0.00 2.17
1937 2221 5.048921 CCATATTGGATCTAAGCAGCAAGTG 60.049 44.000 0.00 0.00 40.96 3.16
1945 2229 6.525629 AGTGTGTACCATATTGGATCTAAGC 58.474 40.000 0.00 0.00 40.96 3.09
1955 2239 4.163458 CCCTGGTGTAGTGTGTACCATATT 59.837 45.833 0.00 0.00 43.05 1.28
1956 2240 3.709653 CCCTGGTGTAGTGTGTACCATAT 59.290 47.826 0.00 0.00 43.05 1.78
1959 2243 1.344065 CCCTGGTGTAGTGTGTACCA 58.656 55.000 0.00 0.00 41.90 3.25
1960 2244 1.001633 CACCCTGGTGTAGTGTGTACC 59.998 57.143 8.20 0.00 40.91 3.34
1961 2245 1.607251 GCACCCTGGTGTAGTGTGTAC 60.607 57.143 17.19 0.00 46.90 2.90
1962 2246 0.682852 GCACCCTGGTGTAGTGTGTA 59.317 55.000 17.19 0.00 46.90 2.90
1963 2247 1.341913 TGCACCCTGGTGTAGTGTGT 61.342 55.000 17.19 0.00 46.90 3.72
1964 2248 0.036732 ATGCACCCTGGTGTAGTGTG 59.963 55.000 17.19 3.43 46.90 3.82
1965 2249 0.771127 AATGCACCCTGGTGTAGTGT 59.229 50.000 17.19 0.87 46.90 3.55
1966 2250 1.453155 GAATGCACCCTGGTGTAGTG 58.547 55.000 17.19 4.44 46.90 2.74
1967 2251 0.036388 CGAATGCACCCTGGTGTAGT 60.036 55.000 17.19 12.39 46.90 2.73
1969 2253 1.298340 CCGAATGCACCCTGGTGTA 59.702 57.895 17.19 13.56 46.90 2.90
1970 2254 2.034066 CCGAATGCACCCTGGTGT 59.966 61.111 17.19 0.00 46.90 4.16
1972 2256 2.034066 CACCGAATGCACCCTGGT 59.966 61.111 0.00 0.00 0.00 4.00
1973 2257 1.603455 AACACCGAATGCACCCTGG 60.603 57.895 0.00 0.00 0.00 4.45
1974 2258 1.172180 ACAACACCGAATGCACCCTG 61.172 55.000 0.00 0.00 0.00 4.45
1975 2259 0.398696 TACAACACCGAATGCACCCT 59.601 50.000 0.00 0.00 0.00 4.34
1976 2260 0.802494 CTACAACACCGAATGCACCC 59.198 55.000 0.00 0.00 0.00 4.61
1977 2261 0.802494 CCTACAACACCGAATGCACC 59.198 55.000 0.00 0.00 0.00 5.01
1978 2262 0.168128 GCCTACAACACCGAATGCAC 59.832 55.000 0.00 0.00 0.00 4.57
1979 2263 1.295357 CGCCTACAACACCGAATGCA 61.295 55.000 0.00 0.00 0.00 3.96
1980 2264 1.423845 CGCCTACAACACCGAATGC 59.576 57.895 0.00 0.00 0.00 3.56
2070 2465 7.625498 TTTTGGATAAATGGGAGAAAAAGGT 57.375 32.000 0.00 0.00 0.00 3.50
2084 2479 8.966868 GGGATTAGTTGTCTGATTTTGGATAAA 58.033 33.333 0.00 0.00 0.00 1.40
2097 2492 5.235516 CACTAAACACGGGATTAGTTGTCT 58.764 41.667 16.81 0.00 39.67 3.41
2167 2563 4.986645 TGCATGCACGTGCCGAGT 62.987 61.111 35.72 17.41 44.43 4.18
2250 2857 5.220989 CGATCCAAGCTCATGTCAATGAAAT 60.221 40.000 0.00 0.00 42.28 2.17
2262 2876 0.678950 TGACACACGATCCAAGCTCA 59.321 50.000 0.00 0.00 0.00 4.26
2313 2931 0.598065 GTTGCAGTCCATCAACCACC 59.402 55.000 0.00 0.00 37.26 4.61
2379 3000 6.802608 TCACGTGAAAACTTTTCTCTCTAGA 58.197 36.000 17.62 0.00 0.00 2.43
2419 3045 3.955551 AGAGAGTAGTAGCTAGGGCAAAC 59.044 47.826 0.00 0.00 41.70 2.93
2437 3063 6.669278 CGACGAGTAATATGAAATGGAGAGA 58.331 40.000 0.00 0.00 0.00 3.10
2443 3069 6.696825 ATCAGCGACGAGTAATATGAAATG 57.303 37.500 0.00 0.00 0.00 2.32
2444 3070 7.715265 AAATCAGCGACGAGTAATATGAAAT 57.285 32.000 0.00 0.00 0.00 2.17
2445 3071 7.919091 ACTAAATCAGCGACGAGTAATATGAAA 59.081 33.333 0.00 0.00 0.00 2.69
2447 3073 6.967135 ACTAAATCAGCGACGAGTAATATGA 58.033 36.000 0.00 0.00 0.00 2.15
2448 3074 7.801783 TGTACTAAATCAGCGACGAGTAATATG 59.198 37.037 0.00 0.00 0.00 1.78
2449 3075 7.868775 TGTACTAAATCAGCGACGAGTAATAT 58.131 34.615 0.00 0.00 0.00 1.28
2450 3076 7.250445 TGTACTAAATCAGCGACGAGTAATA 57.750 36.000 0.00 0.00 0.00 0.98
2451 3077 6.127810 TGTACTAAATCAGCGACGAGTAAT 57.872 37.500 0.00 0.00 0.00 1.89
2452 3078 5.550232 TGTACTAAATCAGCGACGAGTAA 57.450 39.130 0.00 0.00 0.00 2.24
2453 3079 5.327091 GTTGTACTAAATCAGCGACGAGTA 58.673 41.667 0.00 0.00 0.00 2.59
2456 3082 3.057386 TGGTTGTACTAAATCAGCGACGA 60.057 43.478 0.00 0.00 0.00 4.20
2457 3083 3.247442 TGGTTGTACTAAATCAGCGACG 58.753 45.455 0.00 0.00 0.00 5.12
2458 3084 4.868171 TCATGGTTGTACTAAATCAGCGAC 59.132 41.667 0.00 0.00 0.00 5.19
2459 3085 5.079689 TCATGGTTGTACTAAATCAGCGA 57.920 39.130 0.00 0.00 0.00 4.93
2461 3087 4.635765 TGCTCATGGTTGTACTAAATCAGC 59.364 41.667 0.00 0.00 0.00 4.26
2462 3088 6.932356 ATGCTCATGGTTGTACTAAATCAG 57.068 37.500 0.00 0.00 0.00 2.90
2463 3089 9.489084 GTATATGCTCATGGTTGTACTAAATCA 57.511 33.333 0.00 0.00 0.00 2.57
2464 3090 9.489084 TGTATATGCTCATGGTTGTACTAAATC 57.511 33.333 0.00 0.00 0.00 2.17
2466 3092 9.845740 ATTGTATATGCTCATGGTTGTACTAAA 57.154 29.630 0.00 0.00 0.00 1.85
2468 3094 9.923143 GTATTGTATATGCTCATGGTTGTACTA 57.077 33.333 0.00 0.00 0.00 1.82
2470 3096 8.601845 TGTATTGTATATGCTCATGGTTGTAC 57.398 34.615 0.00 0.00 0.00 2.90
2472 3098 7.308770 GCATGTATTGTATATGCTCATGGTTGT 60.309 37.037 10.29 0.00 46.01 3.32
2473 3099 7.025365 GCATGTATTGTATATGCTCATGGTTG 58.975 38.462 10.29 0.00 46.01 3.77
2474 3100 7.149569 GCATGTATTGTATATGCTCATGGTT 57.850 36.000 10.29 0.00 46.01 3.67
2475 3101 6.748333 GCATGTATTGTATATGCTCATGGT 57.252 37.500 10.29 0.00 46.01 3.55
2522 3148 9.565213 CATCATAAGTTCTTTCTCCATGAAAAC 57.435 33.333 0.00 0.00 43.25 2.43
2553 3179 8.946085 TGTTTCGAGCACATATTTTTCTTCTAT 58.054 29.630 0.00 0.00 0.00 1.98
2578 3204 7.538303 AAGAAAAGTAGGTTTTGCAAATGTG 57.462 32.000 13.65 0.00 38.54 3.21
2586 3482 7.644157 GTCTTGTGCTAAGAAAAGTAGGTTTTG 59.356 37.037 5.71 0.00 38.54 2.44
2590 3486 5.925509 TGTCTTGTGCTAAGAAAAGTAGGT 58.074 37.500 5.71 0.00 0.00 3.08
2591 3487 6.428159 ACATGTCTTGTGCTAAGAAAAGTAGG 59.572 38.462 0.00 0.00 37.11 3.18
3013 6806 3.618780 GACCACCCAGCTCAGCAGG 62.619 68.421 0.00 0.00 34.89 4.85
3076 6869 1.951209 TGATCCACCAACTCAGGCTA 58.049 50.000 0.00 0.00 0.00 3.93
3085 6878 1.819928 CCACGACAATGATCCACCAA 58.180 50.000 0.00 0.00 0.00 3.67
3375 7168 4.689612 TGGATTGATTACTAGGCACTCC 57.310 45.455 0.00 0.00 41.75 3.85
3376 7169 7.039363 ACTCTATGGATTGATTACTAGGCACTC 60.039 40.741 0.00 0.00 41.75 3.51
3377 7170 6.784969 ACTCTATGGATTGATTACTAGGCACT 59.215 38.462 0.00 0.00 46.37 4.40
3378 7171 6.870965 CACTCTATGGATTGATTACTAGGCAC 59.129 42.308 0.00 0.00 0.00 5.01
3395 7197 6.238049 GCAAGTTAATCAGCACTCACTCTATG 60.238 42.308 0.00 0.00 0.00 2.23
3872 7964 3.033659 ACATTATGAGACGGAGGGAGT 57.966 47.619 0.00 0.00 0.00 3.85
3873 7965 4.216687 GTCTACATTATGAGACGGAGGGAG 59.783 50.000 0.00 0.00 33.27 4.30
3874 7966 4.142790 GTCTACATTATGAGACGGAGGGA 58.857 47.826 0.00 0.00 33.27 4.20
3875 7967 4.506886 GTCTACATTATGAGACGGAGGG 57.493 50.000 0.00 0.00 33.27 4.30
3881 7973 9.901724 CAAACATAAACGTCTACATTATGAGAC 57.098 33.333 18.95 6.92 38.64 3.36
3882 7974 8.600625 GCAAACATAAACGTCTACATTATGAGA 58.399 33.333 18.95 0.00 38.64 3.27
3883 7975 7.850982 GGCAAACATAAACGTCTACATTATGAG 59.149 37.037 18.95 11.41 38.64 2.90
3884 7976 7.334671 TGGCAAACATAAACGTCTACATTATGA 59.665 33.333 18.95 0.00 38.64 2.15
3885 7977 7.468441 TGGCAAACATAAACGTCTACATTATG 58.532 34.615 13.01 13.01 40.92 1.90
3886 7978 7.618502 TGGCAAACATAAACGTCTACATTAT 57.381 32.000 0.00 0.00 0.00 1.28
3887 7979 7.436430 TTGGCAAACATAAACGTCTACATTA 57.564 32.000 0.00 0.00 0.00 1.90
3888 7980 5.950758 TGGCAAACATAAACGTCTACATT 57.049 34.783 0.00 0.00 0.00 2.71
3889 7981 5.950758 TTGGCAAACATAAACGTCTACAT 57.049 34.783 0.00 0.00 0.00 2.29
3890 7982 5.752892 TTTGGCAAACATAAACGTCTACA 57.247 34.783 8.93 0.00 0.00 2.74
3917 8009 6.264970 ACTCCCTCCGTCTAATAATGTAAGAC 59.735 42.308 0.00 0.00 36.99 3.01
3918 8010 6.371278 ACTCCCTCCGTCTAATAATGTAAGA 58.629 40.000 0.00 0.00 0.00 2.10
3919 8011 6.651975 ACTCCCTCCGTCTAATAATGTAAG 57.348 41.667 0.00 0.00 0.00 2.34
3920 8012 7.293073 ACTACTCCCTCCGTCTAATAATGTAA 58.707 38.462 0.00 0.00 0.00 2.41
3929 8021 4.785346 AATGTACTACTCCCTCCGTCTA 57.215 45.455 0.00 0.00 0.00 2.59
3930 8022 3.666345 AATGTACTACTCCCTCCGTCT 57.334 47.619 0.00 0.00 0.00 4.18
3993 8085 0.476338 TCAACCTGCCCTGTTGCTTA 59.524 50.000 5.49 0.00 42.17 3.09
4044 8136 6.426633 TCGACACAATGTTTCACACTCAATAT 59.573 34.615 0.29 0.00 0.00 1.28
4050 8142 3.242739 GCTTCGACACAATGTTTCACACT 60.243 43.478 0.29 0.00 0.00 3.55
4125 8217 3.091545 CCCAACAGCAACACCTGATATT 58.908 45.455 0.00 0.00 36.67 1.28
4554 8646 2.168728 ACTAAATCTTCGGACCTCAGGC 59.831 50.000 0.00 0.00 0.00 4.85
4578 8670 1.160329 ACGGTGAGCAAGCAAGTGAC 61.160 55.000 0.00 0.00 0.00 3.67
4596 8688 6.109359 ACATATACTGTCAAGAAGGAGCAAC 58.891 40.000 0.00 0.00 29.94 4.17
4681 8773 8.524487 AGGTTACACAAACATAAGAACACAAAA 58.476 29.630 0.00 0.00 40.08 2.44
4806 8898 5.904362 AACCCAAAGCAATTATGACTCTC 57.096 39.130 0.00 0.00 0.00 3.20
4850 8942 2.178235 GTCGCTCCCGGTTAATGCC 61.178 63.158 0.00 0.00 34.56 4.40
4851 8943 1.429148 CTGTCGCTCCCGGTTAATGC 61.429 60.000 0.00 0.00 34.56 3.56
4859 8951 0.933097 CATGAATTCTGTCGCTCCCG 59.067 55.000 7.05 0.00 0.00 5.14
4892 8984 3.447944 AGAAACTCTCCGGTAATCCACTC 59.552 47.826 0.00 0.00 0.00 3.51
4937 9029 8.798402 ACTCTACATACTAAGAAGCATATGACC 58.202 37.037 6.97 0.00 0.00 4.02
5001 9093 9.381033 AGAGAAAGATCAATAACATCAAGACAG 57.619 33.333 0.00 0.00 0.00 3.51
5215 9309 4.648762 AGACAGAGAGAGAGAGAGAGAGAG 59.351 50.000 0.00 0.00 0.00 3.20
5216 9310 4.403752 CAGACAGAGAGAGAGAGAGAGAGA 59.596 50.000 0.00 0.00 0.00 3.10
5217 9311 4.161189 ACAGACAGAGAGAGAGAGAGAGAG 59.839 50.000 0.00 0.00 0.00 3.20
5218 9312 4.081476 CACAGACAGAGAGAGAGAGAGAGA 60.081 50.000 0.00 0.00 0.00 3.10
5219 9313 4.186926 CACAGACAGAGAGAGAGAGAGAG 58.813 52.174 0.00 0.00 0.00 3.20
5220 9314 3.582647 ACACAGACAGAGAGAGAGAGAGA 59.417 47.826 0.00 0.00 0.00 3.10
5221 9315 3.686241 CACACAGACAGAGAGAGAGAGAG 59.314 52.174 0.00 0.00 0.00 3.20
5222 9316 3.072330 ACACACAGACAGAGAGAGAGAGA 59.928 47.826 0.00 0.00 0.00 3.10
5223 9317 3.189080 CACACACAGACAGAGAGAGAGAG 59.811 52.174 0.00 0.00 0.00 3.20
5224 9318 3.145286 CACACACAGACAGAGAGAGAGA 58.855 50.000 0.00 0.00 0.00 3.10
5225 9319 2.884012 ACACACACAGACAGAGAGAGAG 59.116 50.000 0.00 0.00 0.00 3.20
5226 9320 2.620585 CACACACACAGACAGAGAGAGA 59.379 50.000 0.00 0.00 0.00 3.10
5227 9321 2.360483 ACACACACACAGACAGAGAGAG 59.640 50.000 0.00 0.00 0.00 3.20
5228 9322 2.099756 CACACACACACAGACAGAGAGA 59.900 50.000 0.00 0.00 0.00 3.10
5229 9323 2.159184 ACACACACACACAGACAGAGAG 60.159 50.000 0.00 0.00 0.00 3.20
5230 9324 1.824852 ACACACACACACAGACAGAGA 59.175 47.619 0.00 0.00 0.00 3.10
5231 9325 1.929169 CACACACACACACAGACAGAG 59.071 52.381 0.00 0.00 0.00 3.35
5232 9326 1.275010 ACACACACACACACAGACAGA 59.725 47.619 0.00 0.00 0.00 3.41
5233 9327 1.394572 CACACACACACACACAGACAG 59.605 52.381 0.00 0.00 0.00 3.51
5234 9328 1.270571 ACACACACACACACACAGACA 60.271 47.619 0.00 0.00 0.00 3.41
5235 9329 1.128507 CACACACACACACACACAGAC 59.871 52.381 0.00 0.00 0.00 3.51
5236 9330 1.270571 ACACACACACACACACACAGA 60.271 47.619 0.00 0.00 0.00 3.41
5237 9331 1.136000 CACACACACACACACACACAG 60.136 52.381 0.00 0.00 0.00 3.66
5238 9332 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
5239 9333 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
5240 9334 0.871057 CACACACACACACACACACA 59.129 50.000 0.00 0.00 0.00 3.72
5241 9335 0.871722 ACACACACACACACACACAC 59.128 50.000 0.00 0.00 0.00 3.82
5306 9415 5.036117 ACAAGGTTCAAGTTTAGCTCTCA 57.964 39.130 0.00 0.00 0.00 3.27
5307 9416 7.492352 TTTACAAGGTTCAAGTTTAGCTCTC 57.508 36.000 0.00 0.00 0.00 3.20
5319 9428 9.050601 CCTTTTATGCAAAATTTACAAGGTTCA 57.949 29.630 0.00 0.00 33.27 3.18
5336 9445 8.718102 TTCTACATCTTGTACTCCTTTTATGC 57.282 34.615 0.00 0.00 0.00 3.14
5398 9507 2.611518 CTGACCTAGCTTTTGACCTCG 58.388 52.381 0.00 0.00 0.00 4.63
5455 9568 5.072600 AGGTCCAACTAACTTGAACCATACA 59.927 40.000 0.00 0.00 30.42 2.29
5456 9569 5.411669 CAGGTCCAACTAACTTGAACCATAC 59.588 44.000 0.00 0.00 30.42 2.39
5458 9571 4.141251 ACAGGTCCAACTAACTTGAACCAT 60.141 41.667 0.00 0.00 30.42 3.55
5460 9573 3.816994 ACAGGTCCAACTAACTTGAACC 58.183 45.455 0.00 0.00 30.42 3.62
5461 9574 4.879545 TCAACAGGTCCAACTAACTTGAAC 59.120 41.667 0.00 0.00 30.42 3.18
5462 9575 5.105567 TCAACAGGTCCAACTAACTTGAA 57.894 39.130 0.00 0.00 30.42 2.69
5463 9576 4.764050 TCAACAGGTCCAACTAACTTGA 57.236 40.909 0.00 0.00 30.42 3.02
5464 9577 4.638421 TGTTCAACAGGTCCAACTAACTTG 59.362 41.667 0.00 0.00 0.00 3.16
5465 9578 4.638865 GTGTTCAACAGGTCCAACTAACTT 59.361 41.667 0.00 0.00 0.00 2.66
5466 9579 4.196971 GTGTTCAACAGGTCCAACTAACT 58.803 43.478 0.00 0.00 0.00 2.24
5467 9580 3.314357 GGTGTTCAACAGGTCCAACTAAC 59.686 47.826 0.00 0.00 0.00 2.34
5468 9581 3.547746 GGTGTTCAACAGGTCCAACTAA 58.452 45.455 0.00 0.00 0.00 2.24
5469 9582 2.158726 GGGTGTTCAACAGGTCCAACTA 60.159 50.000 0.00 0.00 0.00 2.24
5470 9583 1.409661 GGGTGTTCAACAGGTCCAACT 60.410 52.381 0.00 0.00 0.00 3.16
5471 9584 1.029681 GGGTGTTCAACAGGTCCAAC 58.970 55.000 0.00 0.00 0.00 3.77
5472 9585 0.464735 CGGGTGTTCAACAGGTCCAA 60.465 55.000 0.00 0.00 0.00 3.53
5473 9586 1.147376 CGGGTGTTCAACAGGTCCA 59.853 57.895 0.00 0.00 0.00 4.02
5474 9587 2.258726 GCGGGTGTTCAACAGGTCC 61.259 63.158 0.00 0.00 0.00 4.46
5475 9588 1.098712 TTGCGGGTGTTCAACAGGTC 61.099 55.000 0.00 0.00 0.00 3.85
5476 9589 0.681564 TTTGCGGGTGTTCAACAGGT 60.682 50.000 0.00 0.00 0.00 4.00
5477 9590 0.457851 TTTTGCGGGTGTTCAACAGG 59.542 50.000 0.00 0.00 0.00 4.00
5478 9591 2.285827 TTTTTGCGGGTGTTCAACAG 57.714 45.000 0.00 0.00 0.00 3.16
5496 9609 2.430694 GCTTCAACAGGTCCACCTTTTT 59.569 45.455 0.00 0.00 46.09 1.94
5497 9610 2.031870 GCTTCAACAGGTCCACCTTTT 58.968 47.619 0.00 0.00 46.09 2.27
5498 9611 1.692411 GCTTCAACAGGTCCACCTTT 58.308 50.000 0.00 0.00 46.09 3.11
5499 9612 0.178990 GGCTTCAACAGGTCCACCTT 60.179 55.000 0.00 0.00 46.09 3.50
5551 9664 2.639839 ACTGCAGTACTGTTCCTTCCAT 59.360 45.455 20.16 0.52 0.00 3.41
5552 9665 2.047061 ACTGCAGTACTGTTCCTTCCA 58.953 47.619 20.16 10.31 0.00 3.53
5553 9666 2.417719 CACTGCAGTACTGTTCCTTCC 58.582 52.381 21.20 6.13 0.00 3.46
5554 9667 1.801178 GCACTGCAGTACTGTTCCTTC 59.199 52.381 21.20 6.84 0.00 3.46
5556 9669 0.758734 TGCACTGCAGTACTGTTCCT 59.241 50.000 21.20 2.03 33.32 3.36
5557 9670 0.868406 GTGCACTGCAGTACTGTTCC 59.132 55.000 21.20 8.27 40.08 3.62
5559 9672 1.875514 CATGTGCACTGCAGTACTGTT 59.124 47.619 21.20 6.37 40.08 3.16
5561 9674 0.800631 CCATGTGCACTGCAGTACTG 59.199 55.000 21.20 18.93 40.08 2.74
5562 9675 0.321919 CCCATGTGCACTGCAGTACT 60.322 55.000 21.20 2.69 40.08 2.73
5563 9676 1.926511 GCCCATGTGCACTGCAGTAC 61.927 60.000 21.20 15.47 40.08 2.73
5564 9677 1.675310 GCCCATGTGCACTGCAGTA 60.675 57.895 21.20 3.85 40.08 2.74
5565 9678 2.987547 GCCCATGTGCACTGCAGT 60.988 61.111 15.25 15.25 40.08 4.40
5592 9724 4.734917 AGACGGACGACAGAGATTTTTAG 58.265 43.478 0.00 0.00 0.00 1.85
5597 9729 1.822506 TGAGACGGACGACAGAGATT 58.177 50.000 0.00 0.00 0.00 2.40
5599 9731 1.822506 AATGAGACGGACGACAGAGA 58.177 50.000 0.00 0.00 0.00 3.10
5600 9732 2.254459 CAAATGAGACGGACGACAGAG 58.746 52.381 0.00 0.00 0.00 3.35
5601 9733 1.067846 CCAAATGAGACGGACGACAGA 60.068 52.381 0.00 0.00 0.00 3.41
5602 9734 1.350193 CCAAATGAGACGGACGACAG 58.650 55.000 0.00 0.00 0.00 3.51
5603 9735 0.037697 CCCAAATGAGACGGACGACA 60.038 55.000 0.00 0.00 0.00 4.35
5605 9737 0.901114 TCCCCAAATGAGACGGACGA 60.901 55.000 0.00 0.00 0.00 4.20
5607 9739 0.613777 ACTCCCCAAATGAGACGGAC 59.386 55.000 0.00 0.00 33.95 4.79
5608 9740 1.278127 GAACTCCCCAAATGAGACGGA 59.722 52.381 0.00 0.00 33.95 4.69
5636 9768 0.253160 ACACAGGAGGCCCCATAGAA 60.253 55.000 12.24 0.00 37.41 2.10
5643 9775 0.179000 CAGTATCACACAGGAGGCCC 59.821 60.000 0.00 0.00 0.00 5.80
5644 9776 0.179000 CCAGTATCACACAGGAGGCC 59.821 60.000 0.00 0.00 35.86 5.19
5645 9777 1.195115 TCCAGTATCACACAGGAGGC 58.805 55.000 0.00 0.00 37.87 4.70
5647 9779 5.302823 TGACATATCCAGTATCACACAGGAG 59.697 44.000 0.00 0.00 45.17 3.69
5659 9791 7.147585 GCATCCCTCTTATATGACATATCCAGT 60.148 40.741 11.28 0.00 0.00 4.00
5672 9804 1.419381 TGTGCGGCATCCCTCTTATA 58.581 50.000 5.72 0.00 0.00 0.98
5673 9805 0.546122 TTGTGCGGCATCCCTCTTAT 59.454 50.000 5.72 0.00 0.00 1.73
5685 9817 0.601057 CCTTAAAACCCCTTGTGCGG 59.399 55.000 0.00 0.00 0.00 5.69
5686 9818 1.611519 TCCTTAAAACCCCTTGTGCG 58.388 50.000 0.00 0.00 0.00 5.34
5687 9819 4.617253 AAATCCTTAAAACCCCTTGTGC 57.383 40.909 0.00 0.00 0.00 4.57
5693 9825 8.514330 AACAAAAGAAAAATCCTTAAAACCCC 57.486 30.769 0.00 0.00 0.00 4.95
5711 9843 7.905604 AACAGAAAGGAAAAGGAAACAAAAG 57.094 32.000 0.00 0.00 0.00 2.27
5712 9844 9.780186 TTAAACAGAAAGGAAAAGGAAACAAAA 57.220 25.926 0.00 0.00 0.00 2.44
5713 9845 9.210329 GTTAAACAGAAAGGAAAAGGAAACAAA 57.790 29.630 0.00 0.00 0.00 2.83
5714 9846 8.590204 AGTTAAACAGAAAGGAAAAGGAAACAA 58.410 29.630 0.00 0.00 0.00 2.83
5715 9847 8.129496 AGTTAAACAGAAAGGAAAAGGAAACA 57.871 30.769 0.00 0.00 0.00 2.83
5716 9848 9.731819 CTAGTTAAACAGAAAGGAAAAGGAAAC 57.268 33.333 0.00 0.00 0.00 2.78
5738 9870 6.094464 ACGAAACAAAACTGGCTAAAACTAGT 59.906 34.615 0.00 0.00 0.00 2.57
5746 9878 8.705048 AATTTTAAACGAAACAAAACTGGCTA 57.295 26.923 0.00 0.00 0.00 3.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.