Multiple sequence alignment - TraesCS3A01G496800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G496800 chr3A 100.000 2549 0 0 1 2549 722406617 722404069 0 4708
1 TraesCS3A01G496800 chr6B 98.687 1980 22 3 571 2549 660437743 660435767 0 3509
2 TraesCS3A01G496800 chr2B 98.586 1980 26 2 571 2549 4739876 4741854 0 3500
3 TraesCS3A01G496800 chr2B 98.388 1985 23 6 567 2549 25861467 25863444 0 3480
4 TraesCS3A01G496800 chr7A 98.537 1982 25 4 570 2549 701581940 701583919 0 3496
5 TraesCS3A01G496800 chr7B 98.486 1981 26 3 571 2549 1776631 1774653 0 3489
6 TraesCS3A01G496800 chr7B 98.486 1982 25 5 570 2549 337148379 337150357 0 3489
7 TraesCS3A01G496800 chr7B 98.388 1985 27 4 568 2549 552932146 552930164 0 3483
8 TraesCS3A01G496800 chr1A 98.484 1979 27 2 571 2549 22791529 22793504 0 3485
9 TraesCS3A01G496800 chr3B 98.434 1980 27 3 571 2549 379294093 379296069 0 3482


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G496800 chr3A 722404069 722406617 2548 True 4708 4708 100.000 1 2549 1 chr3A.!!$R1 2548
1 TraesCS3A01G496800 chr6B 660435767 660437743 1976 True 3509 3509 98.687 571 2549 1 chr6B.!!$R1 1978
2 TraesCS3A01G496800 chr2B 4739876 4741854 1978 False 3500 3500 98.586 571 2549 1 chr2B.!!$F1 1978
3 TraesCS3A01G496800 chr2B 25861467 25863444 1977 False 3480 3480 98.388 567 2549 1 chr2B.!!$F2 1982
4 TraesCS3A01G496800 chr7A 701581940 701583919 1979 False 3496 3496 98.537 570 2549 1 chr7A.!!$F1 1979
5 TraesCS3A01G496800 chr7B 1774653 1776631 1978 True 3489 3489 98.486 571 2549 1 chr7B.!!$R1 1978
6 TraesCS3A01G496800 chr7B 337148379 337150357 1978 False 3489 3489 98.486 570 2549 1 chr7B.!!$F1 1979
7 TraesCS3A01G496800 chr7B 552930164 552932146 1982 True 3483 3483 98.388 568 2549 1 chr7B.!!$R2 1981
8 TraesCS3A01G496800 chr1A 22791529 22793504 1975 False 3485 3485 98.484 571 2549 1 chr1A.!!$F1 1978
9 TraesCS3A01G496800 chr3B 379294093 379296069 1976 False 3482 3482 98.434 571 2549 1 chr3B.!!$F1 1978

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
303 304 0.030235 CGCTGTATCGATCCAACGGA 59.97 55.0 0.0 0.0 35.55 4.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1753 1756 2.235402 CTGAATTTGGCCCAAGAGCAAT 59.765 45.455 0.0 0.0 0.0 3.56 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 8.792633 ACTAGATCTGATAAGTCATACAAGAGC 58.207 37.037 5.18 0.00 32.98 4.09
35 36 6.676950 AGATCTGATAAGTCATACAAGAGCG 58.323 40.000 0.00 0.00 32.98 5.03
36 37 6.488344 AGATCTGATAAGTCATACAAGAGCGA 59.512 38.462 0.00 0.00 32.98 4.93
37 38 6.641169 TCTGATAAGTCATACAAGAGCGAT 57.359 37.500 0.00 0.00 32.98 4.58
38 39 7.745620 TCTGATAAGTCATACAAGAGCGATA 57.254 36.000 0.00 0.00 32.98 2.92
39 40 7.585867 TCTGATAAGTCATACAAGAGCGATAC 58.414 38.462 0.00 0.00 32.98 2.24
40 41 6.678878 TGATAAGTCATACAAGAGCGATACC 58.321 40.000 0.00 0.00 0.00 2.73
41 42 6.490381 TGATAAGTCATACAAGAGCGATACCT 59.510 38.462 0.00 0.00 0.00 3.08
42 43 7.664318 TGATAAGTCATACAAGAGCGATACCTA 59.336 37.037 0.00 0.00 0.00 3.08
43 44 6.710597 AAGTCATACAAGAGCGATACCTAA 57.289 37.500 0.00 0.00 0.00 2.69
44 45 6.902771 AGTCATACAAGAGCGATACCTAAT 57.097 37.500 0.00 0.00 0.00 1.73
45 46 7.997773 AGTCATACAAGAGCGATACCTAATA 57.002 36.000 0.00 0.00 0.00 0.98
46 47 8.405418 AGTCATACAAGAGCGATACCTAATAA 57.595 34.615 0.00 0.00 0.00 1.40
47 48 8.857098 AGTCATACAAGAGCGATACCTAATAAA 58.143 33.333 0.00 0.00 0.00 1.40
48 49 8.913656 GTCATACAAGAGCGATACCTAATAAAC 58.086 37.037 0.00 0.00 0.00 2.01
49 50 8.857098 TCATACAAGAGCGATACCTAATAAACT 58.143 33.333 0.00 0.00 0.00 2.66
52 53 8.235359 ACAAGAGCGATACCTAATAAACTAGT 57.765 34.615 0.00 0.00 0.00 2.57
53 54 9.347240 ACAAGAGCGATACCTAATAAACTAGTA 57.653 33.333 0.00 0.00 0.00 1.82
54 55 9.828852 CAAGAGCGATACCTAATAAACTAGTAG 57.171 37.037 0.00 0.00 0.00 2.57
55 56 9.571816 AAGAGCGATACCTAATAAACTAGTAGT 57.428 33.333 0.00 0.00 0.00 2.73
65 66 9.604626 CCTAATAAACTAGTAGTATGTACGTGC 57.395 37.037 2.50 0.00 0.00 5.34
73 74 9.445878 ACTAGTAGTATGTACGTGCATATATGT 57.554 33.333 25.81 16.36 34.35 2.29
74 75 9.704098 CTAGTAGTATGTACGTGCATATATGTG 57.296 37.037 25.81 12.98 34.35 3.21
75 76 8.107399 AGTAGTATGTACGTGCATATATGTGT 57.893 34.615 25.81 12.15 34.35 3.72
76 77 9.223099 AGTAGTATGTACGTGCATATATGTGTA 57.777 33.333 25.81 11.28 34.35 2.90
77 78 9.270576 GTAGTATGTACGTGCATATATGTGTAC 57.729 37.037 25.81 23.57 34.35 2.90
78 79 7.310664 AGTATGTACGTGCATATATGTGTACC 58.689 38.462 25.81 11.93 34.84 3.34
79 80 4.538917 TGTACGTGCATATATGTGTACCG 58.461 43.478 25.36 17.92 34.84 4.02
80 81 3.994204 ACGTGCATATATGTGTACCGA 57.006 42.857 14.14 0.00 31.98 4.69
81 82 4.514781 ACGTGCATATATGTGTACCGAT 57.485 40.909 14.14 0.00 31.98 4.18
82 83 4.878439 ACGTGCATATATGTGTACCGATT 58.122 39.130 14.14 0.00 31.98 3.34
83 84 6.016213 ACGTGCATATATGTGTACCGATTA 57.984 37.500 14.14 0.00 31.98 1.75
84 85 6.627243 ACGTGCATATATGTGTACCGATTAT 58.373 36.000 14.14 0.00 31.98 1.28
85 86 6.530181 ACGTGCATATATGTGTACCGATTATG 59.470 38.462 14.14 2.59 31.98 1.90
86 87 6.019881 CGTGCATATATGTGTACCGATTATGG 60.020 42.308 14.14 0.00 31.98 2.74
87 88 6.257849 GTGCATATATGTGTACCGATTATGGG 59.742 42.308 14.14 0.00 0.00 4.00
88 89 5.236478 GCATATATGTGTACCGATTATGGGC 59.764 44.000 14.14 0.00 0.00 5.36
89 90 2.163818 ATGTGTACCGATTATGGGCG 57.836 50.000 0.00 0.00 0.00 6.13
90 91 0.531090 TGTGTACCGATTATGGGCGC 60.531 55.000 0.00 0.00 0.00 6.53
91 92 1.070105 TGTACCGATTATGGGCGCC 59.930 57.895 21.18 21.18 0.00 6.53
92 93 2.025418 GTACCGATTATGGGCGCCG 61.025 63.158 22.54 6.68 0.00 6.46
93 94 2.500714 TACCGATTATGGGCGCCGT 61.501 57.895 22.54 14.61 0.00 5.68
94 95 2.424705 TACCGATTATGGGCGCCGTC 62.425 60.000 22.54 8.26 0.00 4.79
95 96 3.403057 CGATTATGGGCGCCGTCG 61.403 66.667 22.54 19.49 39.07 5.12
96 97 2.279918 GATTATGGGCGCCGTCGT 60.280 61.111 22.54 11.72 38.14 4.34
97 98 2.279918 ATTATGGGCGCCGTCGTC 60.280 61.111 22.54 6.51 40.09 4.20
119 120 2.203182 CCGGCCATAGGGAGGGTA 59.797 66.667 2.24 0.00 35.59 3.69
120 121 1.913762 CCGGCCATAGGGAGGGTAG 60.914 68.421 2.24 0.00 35.59 3.18
121 122 1.913762 CGGCCATAGGGAGGGTAGG 60.914 68.421 2.24 0.00 35.59 3.18
122 123 1.539124 GGCCATAGGGAGGGTAGGG 60.539 68.421 0.00 0.00 35.59 3.53
123 124 1.552393 GCCATAGGGAGGGTAGGGA 59.448 63.158 0.00 0.00 35.59 4.20
124 125 0.119358 GCCATAGGGAGGGTAGGGAT 59.881 60.000 0.00 0.00 35.59 3.85
125 126 1.958288 CCATAGGGAGGGTAGGGATG 58.042 60.000 0.00 0.00 35.59 3.51
126 127 1.152271 CCATAGGGAGGGTAGGGATGT 59.848 57.143 0.00 0.00 35.59 3.06
127 128 2.429383 CCATAGGGAGGGTAGGGATGTT 60.429 54.545 0.00 0.00 35.59 2.71
128 129 2.489528 TAGGGAGGGTAGGGATGTTG 57.510 55.000 0.00 0.00 0.00 3.33
129 130 0.722676 AGGGAGGGTAGGGATGTTGA 59.277 55.000 0.00 0.00 0.00 3.18
130 131 1.082194 AGGGAGGGTAGGGATGTTGAA 59.918 52.381 0.00 0.00 0.00 2.69
131 132 1.490910 GGGAGGGTAGGGATGTTGAAG 59.509 57.143 0.00 0.00 0.00 3.02
132 133 2.478292 GGAGGGTAGGGATGTTGAAGA 58.522 52.381 0.00 0.00 0.00 2.87
133 134 2.844348 GGAGGGTAGGGATGTTGAAGAA 59.156 50.000 0.00 0.00 0.00 2.52
134 135 3.370633 GGAGGGTAGGGATGTTGAAGAAC 60.371 52.174 0.00 0.00 0.00 3.01
135 136 2.236395 AGGGTAGGGATGTTGAAGAACG 59.764 50.000 0.00 0.00 34.49 3.95
136 137 2.629051 GGTAGGGATGTTGAAGAACGG 58.371 52.381 0.00 0.00 34.49 4.44
137 138 2.007608 GTAGGGATGTTGAAGAACGGC 58.992 52.381 0.00 0.00 34.49 5.68
138 139 0.322546 AGGGATGTTGAAGAACGGCC 60.323 55.000 0.00 0.00 34.49 6.13
139 140 1.644786 GGGATGTTGAAGAACGGCCG 61.645 60.000 26.86 26.86 34.49 6.13
140 141 1.644786 GGATGTTGAAGAACGGCCGG 61.645 60.000 31.76 11.88 34.49 6.13
141 142 2.253414 GATGTTGAAGAACGGCCGGC 62.253 60.000 31.76 21.18 34.49 6.13
142 143 3.733960 GTTGAAGAACGGCCGGCC 61.734 66.667 36.69 36.69 0.00 6.13
143 144 4.257654 TTGAAGAACGGCCGGCCA 62.258 61.111 42.78 21.21 35.37 5.36
144 145 4.697756 TGAAGAACGGCCGGCCAG 62.698 66.667 42.78 34.78 35.37 4.85
145 146 4.699522 GAAGAACGGCCGGCCAGT 62.700 66.667 42.78 35.43 35.37 4.00
146 147 4.699522 AAGAACGGCCGGCCAGTC 62.700 66.667 42.78 35.64 35.37 3.51
190 191 4.632974 GGCGGCCATAGGGAGCTG 62.633 72.222 15.62 0.00 38.76 4.24
192 193 4.976925 CGGCCATAGGGAGCTGCG 62.977 72.222 2.24 0.00 35.59 5.18
193 194 4.632974 GGCCATAGGGAGCTGCGG 62.633 72.222 0.00 0.00 35.59 5.69
194 195 3.866582 GCCATAGGGAGCTGCGGT 61.867 66.667 0.00 0.00 35.59 5.68
195 196 2.911143 CCATAGGGAGCTGCGGTT 59.089 61.111 0.00 0.00 35.59 4.44
196 197 1.227674 CCATAGGGAGCTGCGGTTC 60.228 63.158 0.00 0.00 35.59 3.62
197 198 1.227674 CATAGGGAGCTGCGGTTCC 60.228 63.158 19.63 19.63 41.34 3.62
198 199 1.689233 ATAGGGAGCTGCGGTTCCA 60.689 57.895 27.45 10.60 43.44 3.53
199 200 1.056700 ATAGGGAGCTGCGGTTCCAT 61.057 55.000 27.45 23.73 43.44 3.41
200 201 1.271840 TAGGGAGCTGCGGTTCCATT 61.272 55.000 27.45 17.80 43.44 3.16
201 202 1.678970 GGGAGCTGCGGTTCCATTT 60.679 57.895 27.45 0.00 43.44 2.32
202 203 1.250840 GGGAGCTGCGGTTCCATTTT 61.251 55.000 27.45 0.00 43.44 1.82
203 204 0.109132 GGAGCTGCGGTTCCATTTTG 60.109 55.000 22.50 0.00 41.63 2.44
204 205 0.733909 GAGCTGCGGTTCCATTTTGC 60.734 55.000 0.00 0.00 0.00 3.68
205 206 1.181098 AGCTGCGGTTCCATTTTGCT 61.181 50.000 0.00 0.00 0.00 3.91
206 207 1.010419 GCTGCGGTTCCATTTTGCTG 61.010 55.000 0.00 0.00 0.00 4.41
207 208 1.006337 TGCGGTTCCATTTTGCTGC 60.006 52.632 0.00 0.00 0.00 5.25
208 209 1.006337 GCGGTTCCATTTTGCTGCA 60.006 52.632 0.00 0.00 33.76 4.41
209 210 1.010419 GCGGTTCCATTTTGCTGCAG 61.010 55.000 10.11 10.11 33.76 4.41
210 211 1.010419 CGGTTCCATTTTGCTGCAGC 61.010 55.000 31.89 31.89 42.50 5.25
211 212 0.319405 GGTTCCATTTTGCTGCAGCT 59.681 50.000 36.61 16.43 42.66 4.24
212 213 1.545582 GGTTCCATTTTGCTGCAGCTA 59.454 47.619 36.61 28.48 42.66 3.32
213 214 2.416431 GGTTCCATTTTGCTGCAGCTAG 60.416 50.000 36.61 21.23 42.66 3.42
214 215 1.466856 TCCATTTTGCTGCAGCTAGG 58.533 50.000 36.61 27.76 42.66 3.02
215 216 0.458669 CCATTTTGCTGCAGCTAGGG 59.541 55.000 36.61 27.10 42.66 3.53
216 217 1.466856 CATTTTGCTGCAGCTAGGGA 58.533 50.000 36.61 19.94 42.66 4.20
217 218 2.029623 CATTTTGCTGCAGCTAGGGAT 58.970 47.619 36.61 21.11 42.66 3.85
218 219 1.466856 TTTTGCTGCAGCTAGGGATG 58.533 50.000 36.61 0.00 42.66 3.51
219 220 0.329261 TTTGCTGCAGCTAGGGATGT 59.671 50.000 36.61 0.00 42.66 3.06
220 221 0.329261 TTGCTGCAGCTAGGGATGTT 59.671 50.000 36.61 0.00 42.66 2.71
221 222 0.393402 TGCTGCAGCTAGGGATGTTG 60.393 55.000 36.61 0.00 42.66 3.33
222 223 0.107508 GCTGCAGCTAGGGATGTTGA 60.108 55.000 31.33 0.00 38.21 3.18
223 224 1.679944 GCTGCAGCTAGGGATGTTGAA 60.680 52.381 31.33 0.00 38.21 2.69
224 225 2.928334 CTGCAGCTAGGGATGTTGAAT 58.072 47.619 0.00 0.00 0.00 2.57
225 226 2.617308 CTGCAGCTAGGGATGTTGAATG 59.383 50.000 0.00 0.00 0.00 2.67
226 227 2.025981 TGCAGCTAGGGATGTTGAATGT 60.026 45.455 0.00 0.00 0.00 2.71
227 228 2.357009 GCAGCTAGGGATGTTGAATGTG 59.643 50.000 0.00 0.00 0.00 3.21
228 229 3.877559 CAGCTAGGGATGTTGAATGTGA 58.122 45.455 0.00 0.00 0.00 3.58
229 230 3.875727 CAGCTAGGGATGTTGAATGTGAG 59.124 47.826 0.00 0.00 0.00 3.51
230 231 3.118112 AGCTAGGGATGTTGAATGTGAGG 60.118 47.826 0.00 0.00 0.00 3.86
231 232 2.134789 AGGGATGTTGAATGTGAGGC 57.865 50.000 0.00 0.00 0.00 4.70
232 233 1.106285 GGGATGTTGAATGTGAGGCC 58.894 55.000 0.00 0.00 0.00 5.19
233 234 0.734889 GGATGTTGAATGTGAGGCCG 59.265 55.000 0.00 0.00 0.00 6.13
234 235 0.734889 GATGTTGAATGTGAGGCCGG 59.265 55.000 0.00 0.00 0.00 6.13
235 236 0.680921 ATGTTGAATGTGAGGCCGGG 60.681 55.000 2.18 0.00 0.00 5.73
236 237 1.002624 GTTGAATGTGAGGCCGGGA 60.003 57.895 2.18 0.00 0.00 5.14
237 238 0.394352 GTTGAATGTGAGGCCGGGAT 60.394 55.000 2.18 0.00 0.00 3.85
238 239 1.134220 GTTGAATGTGAGGCCGGGATA 60.134 52.381 2.18 0.00 0.00 2.59
239 240 0.758734 TGAATGTGAGGCCGGGATAG 59.241 55.000 2.18 0.00 0.00 2.08
240 241 0.035458 GAATGTGAGGCCGGGATAGG 59.965 60.000 2.18 0.00 0.00 2.57
241 242 0.694444 AATGTGAGGCCGGGATAGGT 60.694 55.000 2.18 0.00 0.00 3.08
242 243 0.694444 ATGTGAGGCCGGGATAGGTT 60.694 55.000 2.18 0.00 0.00 3.50
243 244 1.146263 GTGAGGCCGGGATAGGTTG 59.854 63.158 2.18 0.00 0.00 3.77
244 245 2.070039 TGAGGCCGGGATAGGTTGG 61.070 63.158 2.18 0.00 0.00 3.77
245 246 2.772622 AGGCCGGGATAGGTTGGG 60.773 66.667 2.18 0.00 0.00 4.12
246 247 3.886001 GGCCGGGATAGGTTGGGG 61.886 72.222 2.18 0.00 0.00 4.96
247 248 3.886001 GCCGGGATAGGTTGGGGG 61.886 72.222 2.18 0.00 0.00 5.40
248 249 2.367784 CCGGGATAGGTTGGGGGT 60.368 66.667 0.00 0.00 0.00 4.95
249 250 2.004693 CCGGGATAGGTTGGGGGTT 61.005 63.158 0.00 0.00 0.00 4.11
250 251 0.695122 CCGGGATAGGTTGGGGGTTA 60.695 60.000 0.00 0.00 0.00 2.85
251 252 1.215140 CGGGATAGGTTGGGGGTTAA 58.785 55.000 0.00 0.00 0.00 2.01
252 253 1.565288 CGGGATAGGTTGGGGGTTAAA 59.435 52.381 0.00 0.00 0.00 1.52
253 254 2.176148 CGGGATAGGTTGGGGGTTAAAT 59.824 50.000 0.00 0.00 0.00 1.40
254 255 3.572642 GGGATAGGTTGGGGGTTAAATG 58.427 50.000 0.00 0.00 0.00 2.32
255 256 3.572642 GGATAGGTTGGGGGTTAAATGG 58.427 50.000 0.00 0.00 0.00 3.16
256 257 2.535836 TAGGTTGGGGGTTAAATGGC 57.464 50.000 0.00 0.00 0.00 4.40
257 258 0.790339 AGGTTGGGGGTTAAATGGCT 59.210 50.000 0.00 0.00 0.00 4.75
258 259 0.901827 GGTTGGGGGTTAAATGGCTG 59.098 55.000 0.00 0.00 0.00 4.85
259 260 0.249120 GTTGGGGGTTAAATGGCTGC 59.751 55.000 0.00 0.00 0.00 5.25
260 261 0.907230 TTGGGGGTTAAATGGCTGCC 60.907 55.000 12.87 12.87 0.00 4.85
261 262 2.423064 GGGGGTTAAATGGCTGCCG 61.423 63.158 14.98 0.00 0.00 5.69
262 263 2.423064 GGGGTTAAATGGCTGCCGG 61.423 63.158 14.98 0.00 0.00 6.13
263 264 2.423064 GGGTTAAATGGCTGCCGGG 61.423 63.158 14.98 0.00 0.00 5.73
264 265 2.494445 GTTAAATGGCTGCCGGGC 59.506 61.111 13.32 13.32 41.27 6.13
274 275 3.636231 TGCCGGGCAGCTACAAGT 61.636 61.111 19.77 0.00 33.32 3.16
275 276 3.127533 GCCGGGCAGCTACAAGTG 61.128 66.667 15.62 0.00 0.00 3.16
276 277 2.436646 CCGGGCAGCTACAAGTGG 60.437 66.667 0.00 0.00 0.00 4.00
277 278 3.127533 CGGGCAGCTACAAGTGGC 61.128 66.667 0.00 0.00 38.49 5.01
278 279 2.034066 GGGCAGCTACAAGTGGCA 59.966 61.111 11.14 0.00 40.92 4.92
279 280 1.603455 GGGCAGCTACAAGTGGCAA 60.603 57.895 11.14 0.00 40.92 4.52
280 281 1.589716 GGGCAGCTACAAGTGGCAAG 61.590 60.000 11.14 4.29 40.92 4.01
281 282 0.606401 GGCAGCTACAAGTGGCAAGA 60.606 55.000 11.14 0.00 39.73 3.02
282 283 1.238439 GCAGCTACAAGTGGCAAGAA 58.762 50.000 11.14 0.00 39.73 2.52
283 284 1.608590 GCAGCTACAAGTGGCAAGAAA 59.391 47.619 11.14 0.00 39.73 2.52
284 285 2.605580 GCAGCTACAAGTGGCAAGAAAC 60.606 50.000 11.14 0.00 39.73 2.78
285 286 1.873591 AGCTACAAGTGGCAAGAAACG 59.126 47.619 11.14 0.00 39.73 3.60
286 287 1.663161 GCTACAAGTGGCAAGAAACGC 60.663 52.381 3.54 0.00 37.02 4.84
287 288 1.873591 CTACAAGTGGCAAGAAACGCT 59.126 47.619 0.00 0.00 0.00 5.07
288 289 0.381801 ACAAGTGGCAAGAAACGCTG 59.618 50.000 0.00 0.00 0.00 5.18
289 290 0.381801 CAAGTGGCAAGAAACGCTGT 59.618 50.000 0.00 0.00 0.00 4.40
290 291 1.601903 CAAGTGGCAAGAAACGCTGTA 59.398 47.619 0.00 0.00 0.00 2.74
291 292 2.185004 AGTGGCAAGAAACGCTGTAT 57.815 45.000 0.00 0.00 0.00 2.29
292 293 2.076863 AGTGGCAAGAAACGCTGTATC 58.923 47.619 0.00 0.00 0.00 2.24
293 294 1.075542 TGGCAAGAAACGCTGTATCG 58.924 50.000 0.00 0.00 0.00 2.92
294 295 1.337354 TGGCAAGAAACGCTGTATCGA 60.337 47.619 0.00 0.00 0.00 3.59
295 296 1.933853 GGCAAGAAACGCTGTATCGAT 59.066 47.619 2.16 2.16 0.00 3.59
296 297 2.033662 GGCAAGAAACGCTGTATCGATC 60.034 50.000 0.00 0.00 0.00 3.69
297 298 2.033662 GCAAGAAACGCTGTATCGATCC 60.034 50.000 0.00 0.00 0.00 3.36
298 299 3.186909 CAAGAAACGCTGTATCGATCCA 58.813 45.455 0.00 0.00 0.00 3.41
299 300 3.520290 AGAAACGCTGTATCGATCCAA 57.480 42.857 0.00 0.00 0.00 3.53
300 301 3.187700 AGAAACGCTGTATCGATCCAAC 58.812 45.455 0.00 0.00 0.00 3.77
301 302 1.556564 AACGCTGTATCGATCCAACG 58.443 50.000 11.58 11.58 0.00 4.10
302 303 0.248907 ACGCTGTATCGATCCAACGG 60.249 55.000 16.50 9.49 0.00 4.44
303 304 0.030235 CGCTGTATCGATCCAACGGA 59.970 55.000 0.00 0.00 35.55 4.69
304 305 1.535226 CGCTGTATCGATCCAACGGAA 60.535 52.381 0.00 0.00 34.34 4.30
305 306 2.546778 GCTGTATCGATCCAACGGAAA 58.453 47.619 0.00 0.00 34.34 3.13
306 307 3.131396 GCTGTATCGATCCAACGGAAAT 58.869 45.455 0.00 0.00 34.34 2.17
307 308 3.059597 GCTGTATCGATCCAACGGAAATG 60.060 47.826 0.00 0.00 34.34 2.32
308 309 3.462982 TGTATCGATCCAACGGAAATGG 58.537 45.455 0.00 0.00 39.41 3.16
314 315 2.668144 TCCAACGGAAATGGAAAGGT 57.332 45.000 0.00 0.00 43.84 3.50
315 316 2.235016 TCCAACGGAAATGGAAAGGTG 58.765 47.619 0.00 0.00 43.84 4.00
316 317 1.272212 CCAACGGAAATGGAAAGGTGG 59.728 52.381 0.00 0.00 40.56 4.61
317 318 2.235016 CAACGGAAATGGAAAGGTGGA 58.765 47.619 0.00 0.00 0.00 4.02
318 319 2.625790 CAACGGAAATGGAAAGGTGGAA 59.374 45.455 0.00 0.00 0.00 3.53
319 320 2.952116 ACGGAAATGGAAAGGTGGAAA 58.048 42.857 0.00 0.00 0.00 3.13
320 321 3.506398 ACGGAAATGGAAAGGTGGAAAT 58.494 40.909 0.00 0.00 0.00 2.17
321 322 3.258123 ACGGAAATGGAAAGGTGGAAATG 59.742 43.478 0.00 0.00 0.00 2.32
322 323 3.368323 CGGAAATGGAAAGGTGGAAATGG 60.368 47.826 0.00 0.00 0.00 3.16
323 324 3.837731 GGAAATGGAAAGGTGGAAATGGA 59.162 43.478 0.00 0.00 0.00 3.41
324 325 4.081476 GGAAATGGAAAGGTGGAAATGGAG 60.081 45.833 0.00 0.00 0.00 3.86
325 326 2.603075 TGGAAAGGTGGAAATGGAGG 57.397 50.000 0.00 0.00 0.00 4.30
326 327 2.069775 TGGAAAGGTGGAAATGGAGGA 58.930 47.619 0.00 0.00 0.00 3.71
327 328 2.448961 TGGAAAGGTGGAAATGGAGGAA 59.551 45.455 0.00 0.00 0.00 3.36
328 329 2.826128 GGAAAGGTGGAAATGGAGGAAC 59.174 50.000 0.00 0.00 0.00 3.62
329 330 3.496331 GAAAGGTGGAAATGGAGGAACA 58.504 45.455 0.00 0.00 0.00 3.18
330 331 2.887151 AGGTGGAAATGGAGGAACAG 57.113 50.000 0.00 0.00 0.00 3.16
331 332 1.177401 GGTGGAAATGGAGGAACAGC 58.823 55.000 0.00 0.00 0.00 4.40
332 333 1.272147 GGTGGAAATGGAGGAACAGCT 60.272 52.381 0.00 0.00 0.00 4.24
333 334 2.087646 GTGGAAATGGAGGAACAGCTC 58.912 52.381 0.00 0.00 0.00 4.09
334 335 1.704628 TGGAAATGGAGGAACAGCTCA 59.295 47.619 0.00 0.00 0.00 4.26
335 336 2.087646 GGAAATGGAGGAACAGCTCAC 58.912 52.381 0.00 0.00 0.00 3.51
336 337 2.553028 GGAAATGGAGGAACAGCTCACA 60.553 50.000 0.00 0.00 0.00 3.58
337 338 2.191128 AATGGAGGAACAGCTCACAC 57.809 50.000 0.00 0.00 0.00 3.82
338 339 0.036952 ATGGAGGAACAGCTCACACG 60.037 55.000 0.00 0.00 0.00 4.49
339 340 2.029844 GGAGGAACAGCTCACACGC 61.030 63.158 0.00 0.00 0.00 5.34
340 341 2.356313 AGGAACAGCTCACACGCG 60.356 61.111 3.53 3.53 34.40 6.01
341 342 2.355837 GGAACAGCTCACACGCGA 60.356 61.111 15.93 0.00 34.40 5.87
342 343 2.658707 GGAACAGCTCACACGCGAC 61.659 63.158 15.93 0.00 34.40 5.19
343 344 2.988549 GAACAGCTCACACGCGACG 61.989 63.158 15.93 5.81 34.40 5.12
344 345 3.478724 AACAGCTCACACGCGACGA 62.479 57.895 15.93 4.75 34.40 4.20
345 346 3.168604 CAGCTCACACGCGACGAG 61.169 66.667 15.93 16.10 34.40 4.18
346 347 3.354645 AGCTCACACGCGACGAGA 61.355 61.111 15.93 6.69 34.40 4.04
347 348 2.202492 GCTCACACGCGACGAGAT 60.202 61.111 15.93 0.00 0.00 2.75
348 349 1.801913 GCTCACACGCGACGAGATT 60.802 57.895 15.93 0.00 0.00 2.40
349 350 0.522705 GCTCACACGCGACGAGATTA 60.523 55.000 15.93 0.00 0.00 1.75
350 351 1.457738 CTCACACGCGACGAGATTAG 58.542 55.000 15.93 0.00 0.00 1.73
351 352 0.800631 TCACACGCGACGAGATTAGT 59.199 50.000 15.93 0.00 0.00 2.24
352 353 1.198408 TCACACGCGACGAGATTAGTT 59.802 47.619 15.93 0.00 0.00 2.24
353 354 2.416202 TCACACGCGACGAGATTAGTTA 59.584 45.455 15.93 0.00 0.00 2.24
354 355 3.064408 TCACACGCGACGAGATTAGTTAT 59.936 43.478 15.93 0.00 0.00 1.89
355 356 4.270808 TCACACGCGACGAGATTAGTTATA 59.729 41.667 15.93 0.00 0.00 0.98
356 357 4.375117 CACACGCGACGAGATTAGTTATAC 59.625 45.833 15.93 0.00 0.00 1.47
357 358 3.592799 CACGCGACGAGATTAGTTATACG 59.407 47.826 15.93 0.00 0.00 3.06
358 359 3.151481 CGCGACGAGATTAGTTATACGG 58.849 50.000 0.00 0.00 0.00 4.02
359 360 2.907392 GCGACGAGATTAGTTATACGGC 59.093 50.000 0.00 0.00 0.00 5.68
360 361 3.486584 CGACGAGATTAGTTATACGGCC 58.513 50.000 0.00 0.00 0.00 6.13
361 362 3.058708 CGACGAGATTAGTTATACGGCCA 60.059 47.826 2.24 0.00 0.00 5.36
362 363 4.474113 GACGAGATTAGTTATACGGCCAG 58.526 47.826 2.24 0.00 0.00 4.85
363 364 4.139786 ACGAGATTAGTTATACGGCCAGA 58.860 43.478 2.24 0.00 0.00 3.86
364 365 4.765856 ACGAGATTAGTTATACGGCCAGAT 59.234 41.667 2.24 0.00 0.00 2.90
365 366 5.096169 CGAGATTAGTTATACGGCCAGATG 58.904 45.833 2.24 0.00 0.00 2.90
366 367 5.335740 CGAGATTAGTTATACGGCCAGATGT 60.336 44.000 2.24 0.00 0.00 3.06
367 368 5.784177 AGATTAGTTATACGGCCAGATGTG 58.216 41.667 2.24 0.00 0.00 3.21
368 369 5.538813 AGATTAGTTATACGGCCAGATGTGA 59.461 40.000 2.24 0.00 0.00 3.58
369 370 5.801531 TTAGTTATACGGCCAGATGTGAT 57.198 39.130 2.24 0.00 0.00 3.06
370 371 4.689612 AGTTATACGGCCAGATGTGATT 57.310 40.909 2.24 0.00 0.00 2.57
371 372 5.036117 AGTTATACGGCCAGATGTGATTT 57.964 39.130 2.24 0.00 0.00 2.17
372 373 5.437060 AGTTATACGGCCAGATGTGATTTT 58.563 37.500 2.24 0.00 0.00 1.82
373 374 5.527582 AGTTATACGGCCAGATGTGATTTTC 59.472 40.000 2.24 0.00 0.00 2.29
374 375 1.086696 ACGGCCAGATGTGATTTTCG 58.913 50.000 2.24 0.00 0.00 3.46
375 376 1.086696 CGGCCAGATGTGATTTTCGT 58.913 50.000 2.24 0.00 0.00 3.85
376 377 1.202065 CGGCCAGATGTGATTTTCGTG 60.202 52.381 2.24 0.00 0.00 4.35
377 378 2.083774 GGCCAGATGTGATTTTCGTGA 58.916 47.619 0.00 0.00 0.00 4.35
378 379 2.684881 GGCCAGATGTGATTTTCGTGAT 59.315 45.455 0.00 0.00 0.00 3.06
379 380 3.876914 GGCCAGATGTGATTTTCGTGATA 59.123 43.478 0.00 0.00 0.00 2.15
380 381 4.335315 GGCCAGATGTGATTTTCGTGATAA 59.665 41.667 0.00 0.00 0.00 1.75
381 382 5.163663 GGCCAGATGTGATTTTCGTGATAAA 60.164 40.000 0.00 0.00 0.00 1.40
382 383 6.460123 GGCCAGATGTGATTTTCGTGATAAAT 60.460 38.462 0.00 0.00 0.00 1.40
383 384 6.974622 GCCAGATGTGATTTTCGTGATAAATT 59.025 34.615 0.00 0.00 0.00 1.82
384 385 7.166473 GCCAGATGTGATTTTCGTGATAAATTC 59.834 37.037 0.00 0.00 0.00 2.17
385 386 7.374228 CCAGATGTGATTTTCGTGATAAATTCG 59.626 37.037 0.00 0.00 0.00 3.34
386 387 8.116136 CAGATGTGATTTTCGTGATAAATTCGA 58.884 33.333 0.00 0.00 0.00 3.71
387 388 8.830580 AGATGTGATTTTCGTGATAAATTCGAT 58.169 29.630 0.00 0.00 33.72 3.59
388 389 8.993852 ATGTGATTTTCGTGATAAATTCGATC 57.006 30.769 0.00 0.00 33.72 3.69
389 390 7.969314 TGTGATTTTCGTGATAAATTCGATCA 58.031 30.769 0.00 0.03 33.72 2.92
390 391 8.611757 TGTGATTTTCGTGATAAATTCGATCAT 58.388 29.630 6.34 0.00 35.81 2.45
391 392 9.438291 GTGATTTTCGTGATAAATTCGATCATT 57.562 29.630 6.34 0.00 35.81 2.57
396 397 9.914923 TTTCGTGATAAATTCGATCATTTACTG 57.085 29.630 4.77 0.00 35.81 2.74
397 398 8.865590 TCGTGATAAATTCGATCATTTACTGA 57.134 30.769 4.77 0.14 35.81 3.41
399 400 9.521179 CGTGATAAATTCGATCATTTACTGATG 57.479 33.333 4.77 0.00 44.83 3.07
400 401 9.817365 GTGATAAATTCGATCATTTACTGATGG 57.183 33.333 4.77 0.00 44.83 3.51
401 402 9.777297 TGATAAATTCGATCATTTACTGATGGA 57.223 29.630 4.77 0.00 44.83 3.41
404 405 5.929697 TTCGATCATTTACTGATGGATGC 57.070 39.130 0.00 0.00 45.15 3.91
405 406 4.318332 TCGATCATTTACTGATGGATGCC 58.682 43.478 0.00 0.00 44.83 4.40
406 407 4.067192 CGATCATTTACTGATGGATGCCA 58.933 43.478 0.00 0.00 44.83 4.92
407 408 4.516321 CGATCATTTACTGATGGATGCCAA 59.484 41.667 0.00 0.00 44.83 4.52
408 409 5.182570 CGATCATTTACTGATGGATGCCAAT 59.817 40.000 0.00 0.00 44.83 3.16
409 410 6.585695 ATCATTTACTGATGGATGCCAATC 57.414 37.500 0.00 0.00 43.15 2.67
410 411 4.516321 TCATTTACTGATGGATGCCAATCG 59.484 41.667 0.00 0.00 36.95 3.34
411 412 3.558931 TTACTGATGGATGCCAATCGT 57.441 42.857 0.00 0.00 36.95 3.73
412 413 4.681074 TTACTGATGGATGCCAATCGTA 57.319 40.909 0.00 0.00 36.95 3.43
413 414 3.777106 ACTGATGGATGCCAATCGTAT 57.223 42.857 0.00 0.00 36.95 3.06
414 415 3.405831 ACTGATGGATGCCAATCGTATG 58.594 45.455 0.00 0.00 36.95 2.39
415 416 2.745821 CTGATGGATGCCAATCGTATGG 59.254 50.000 5.08 5.08 43.70 2.74
425 426 3.968649 CCAATCGTATGGCCTTCATTTG 58.031 45.455 3.32 1.13 37.30 2.32
426 427 3.243501 CCAATCGTATGGCCTTCATTTGG 60.244 47.826 3.32 6.91 35.16 3.28
427 428 3.576078 ATCGTATGGCCTTCATTTGGA 57.424 42.857 3.32 0.00 37.30 3.53
428 429 2.917933 TCGTATGGCCTTCATTTGGAG 58.082 47.619 3.32 0.00 37.30 3.86
429 430 2.503765 TCGTATGGCCTTCATTTGGAGA 59.496 45.455 3.32 0.00 37.30 3.71
430 431 2.614057 CGTATGGCCTTCATTTGGAGAC 59.386 50.000 3.32 0.00 37.30 3.36
431 432 2.149973 ATGGCCTTCATTTGGAGACC 57.850 50.000 3.32 0.00 30.55 3.85
432 433 0.322456 TGGCCTTCATTTGGAGACCG 60.322 55.000 3.32 0.00 0.00 4.79
433 434 1.032114 GGCCTTCATTTGGAGACCGG 61.032 60.000 0.00 0.00 0.00 5.28
434 435 0.322546 GCCTTCATTTGGAGACCGGT 60.323 55.000 6.92 6.92 0.00 5.28
435 436 1.886655 GCCTTCATTTGGAGACCGGTT 60.887 52.381 9.42 0.00 0.00 4.44
436 437 2.084546 CCTTCATTTGGAGACCGGTTC 58.915 52.381 9.42 8.44 0.00 3.62
437 438 2.552155 CCTTCATTTGGAGACCGGTTCA 60.552 50.000 9.42 5.22 0.00 3.18
438 439 3.347216 CTTCATTTGGAGACCGGTTCAT 58.653 45.455 9.42 0.00 0.00 2.57
439 440 4.513442 CTTCATTTGGAGACCGGTTCATA 58.487 43.478 9.42 3.85 0.00 2.15
440 441 4.137116 TCATTTGGAGACCGGTTCATAG 57.863 45.455 9.42 1.89 0.00 2.23
441 442 3.517901 TCATTTGGAGACCGGTTCATAGT 59.482 43.478 9.42 0.00 0.00 2.12
442 443 4.712829 TCATTTGGAGACCGGTTCATAGTA 59.287 41.667 9.42 0.00 0.00 1.82
443 444 4.730949 TTTGGAGACCGGTTCATAGTAG 57.269 45.455 9.42 0.00 0.00 2.57
444 445 2.662866 TGGAGACCGGTTCATAGTAGG 58.337 52.381 9.42 0.00 0.00 3.18
445 446 2.024655 TGGAGACCGGTTCATAGTAGGT 60.025 50.000 9.42 0.00 38.00 3.08
446 447 3.202818 TGGAGACCGGTTCATAGTAGGTA 59.797 47.826 9.42 0.00 35.00 3.08
447 448 4.210331 GGAGACCGGTTCATAGTAGGTAA 58.790 47.826 9.42 0.00 35.00 2.85
448 449 4.277921 GGAGACCGGTTCATAGTAGGTAAG 59.722 50.000 9.42 0.00 35.00 2.34
449 450 4.864726 AGACCGGTTCATAGTAGGTAAGT 58.135 43.478 9.42 0.00 35.00 2.24
450 451 4.643784 AGACCGGTTCATAGTAGGTAAGTG 59.356 45.833 9.42 0.00 35.00 3.16
451 452 4.347607 ACCGGTTCATAGTAGGTAAGTGT 58.652 43.478 0.00 0.00 32.76 3.55
452 453 4.159135 ACCGGTTCATAGTAGGTAAGTGTG 59.841 45.833 0.00 0.00 32.76 3.82
453 454 4.159135 CCGGTTCATAGTAGGTAAGTGTGT 59.841 45.833 0.00 0.00 0.00 3.72
454 455 5.100259 CGGTTCATAGTAGGTAAGTGTGTG 58.900 45.833 0.00 0.00 0.00 3.82
455 456 4.868734 GGTTCATAGTAGGTAAGTGTGTGC 59.131 45.833 0.00 0.00 0.00 4.57
456 457 5.475719 GTTCATAGTAGGTAAGTGTGTGCA 58.524 41.667 0.00 0.00 0.00 4.57
457 458 5.932619 TCATAGTAGGTAAGTGTGTGCAT 57.067 39.130 0.00 0.00 0.00 3.96
458 459 5.660460 TCATAGTAGGTAAGTGTGTGCATG 58.340 41.667 0.00 0.00 0.00 4.06
459 460 3.334583 AGTAGGTAAGTGTGTGCATGG 57.665 47.619 0.00 0.00 0.00 3.66
460 461 2.903784 AGTAGGTAAGTGTGTGCATGGA 59.096 45.455 0.00 0.00 0.00 3.41
461 462 2.949177 AGGTAAGTGTGTGCATGGAA 57.051 45.000 0.00 0.00 0.00 3.53
462 463 3.439857 AGGTAAGTGTGTGCATGGAAT 57.560 42.857 0.00 0.00 0.00 3.01
475 476 3.710326 CATGGAATGTGATGGAAGCAG 57.290 47.619 0.00 0.00 40.20 4.24
476 477 3.284617 CATGGAATGTGATGGAAGCAGA 58.715 45.455 0.00 0.00 40.20 4.26
477 478 3.657398 TGGAATGTGATGGAAGCAGAT 57.343 42.857 0.00 0.00 38.11 2.90
478 479 3.284617 TGGAATGTGATGGAAGCAGATG 58.715 45.455 0.00 0.00 33.97 2.90
479 480 3.054213 TGGAATGTGATGGAAGCAGATGA 60.054 43.478 0.00 0.00 33.97 2.92
480 481 3.949754 GGAATGTGATGGAAGCAGATGAA 59.050 43.478 0.00 0.00 33.97 2.57
481 482 4.036498 GGAATGTGATGGAAGCAGATGAAG 59.964 45.833 0.00 0.00 33.97 3.02
482 483 3.986996 TGTGATGGAAGCAGATGAAGA 57.013 42.857 0.00 0.00 24.12 2.87
483 484 4.290711 TGTGATGGAAGCAGATGAAGAA 57.709 40.909 0.00 0.00 24.12 2.52
484 485 4.654915 TGTGATGGAAGCAGATGAAGAAA 58.345 39.130 0.00 0.00 24.12 2.52
485 486 4.698780 TGTGATGGAAGCAGATGAAGAAAG 59.301 41.667 0.00 0.00 24.12 2.62
486 487 4.096081 GTGATGGAAGCAGATGAAGAAAGG 59.904 45.833 0.00 0.00 24.12 3.11
487 488 4.019051 TGATGGAAGCAGATGAAGAAAGGA 60.019 41.667 0.00 0.00 0.00 3.36
488 489 3.947868 TGGAAGCAGATGAAGAAAGGAG 58.052 45.455 0.00 0.00 0.00 3.69
489 490 3.328931 TGGAAGCAGATGAAGAAAGGAGT 59.671 43.478 0.00 0.00 0.00 3.85
490 491 4.202503 TGGAAGCAGATGAAGAAAGGAGTT 60.203 41.667 0.00 0.00 0.00 3.01
491 492 4.155644 GGAAGCAGATGAAGAAAGGAGTTG 59.844 45.833 0.00 0.00 0.00 3.16
492 493 3.080319 AGCAGATGAAGAAAGGAGTTGC 58.920 45.455 0.00 0.00 0.00 4.17
493 494 2.816087 GCAGATGAAGAAAGGAGTTGCA 59.184 45.455 0.00 0.00 0.00 4.08
494 495 3.365767 GCAGATGAAGAAAGGAGTTGCAC 60.366 47.826 0.00 0.00 0.00 4.57
495 496 3.070018 AGATGAAGAAAGGAGTTGCACG 58.930 45.455 0.00 0.00 0.00 5.34
496 497 2.325583 TGAAGAAAGGAGTTGCACGT 57.674 45.000 0.00 0.00 0.00 4.49
497 498 1.939934 TGAAGAAAGGAGTTGCACGTG 59.060 47.619 12.28 12.28 0.00 4.49
498 499 1.940613 GAAGAAAGGAGTTGCACGTGT 59.059 47.619 18.38 0.00 0.00 4.49
499 500 2.902705 AGAAAGGAGTTGCACGTGTA 57.097 45.000 18.38 10.46 0.00 2.90
500 501 3.402628 AGAAAGGAGTTGCACGTGTAT 57.597 42.857 18.38 0.00 0.00 2.29
501 502 3.067106 AGAAAGGAGTTGCACGTGTATG 58.933 45.455 18.38 0.00 0.00 2.39
502 503 1.156736 AAGGAGTTGCACGTGTATGC 58.843 50.000 18.38 8.89 46.32 3.14
509 510 3.628005 GCACGTGTATGCATGCAAT 57.372 47.368 26.68 15.44 45.39 3.56
524 525 5.794650 CATGCAATGCAATTCATACGTAC 57.205 39.130 13.45 0.00 43.62 3.67
525 526 4.954092 TGCAATGCAATTCATACGTACA 57.046 36.364 5.01 0.00 34.76 2.90
526 527 4.657055 TGCAATGCAATTCATACGTACAC 58.343 39.130 5.01 0.00 34.76 2.90
527 528 4.154918 TGCAATGCAATTCATACGTACACA 59.845 37.500 5.01 0.00 34.76 3.72
528 529 5.163673 TGCAATGCAATTCATACGTACACAT 60.164 36.000 5.01 0.00 34.76 3.21
529 530 5.171874 GCAATGCAATTCATACGTACACATG 59.828 40.000 0.00 0.00 31.22 3.21
530 531 6.257423 CAATGCAATTCATACGTACACATGT 58.743 36.000 0.00 0.00 31.22 3.21
531 532 5.215239 TGCAATTCATACGTACACATGTG 57.785 39.130 24.25 24.25 0.00 3.21
532 533 4.028383 GCAATTCATACGTACACATGTGC 58.972 43.478 25.68 9.50 0.00 4.57
533 534 4.587306 CAATTCATACGTACACATGTGCC 58.413 43.478 25.68 15.09 0.00 5.01
534 535 3.603158 TTCATACGTACACATGTGCCT 57.397 42.857 25.68 9.98 0.00 4.75
535 536 3.603158 TCATACGTACACATGTGCCTT 57.397 42.857 25.68 12.32 0.00 4.35
536 537 3.258228 TCATACGTACACATGTGCCTTG 58.742 45.455 25.68 14.91 0.00 3.61
537 538 3.056465 TCATACGTACACATGTGCCTTGA 60.056 43.478 25.68 15.88 0.00 3.02
538 539 2.248280 ACGTACACATGTGCCTTGAA 57.752 45.000 25.68 1.84 0.00 2.69
539 540 2.143122 ACGTACACATGTGCCTTGAAG 58.857 47.619 25.68 12.11 0.00 3.02
540 541 1.135972 CGTACACATGTGCCTTGAAGC 60.136 52.381 25.68 6.19 0.00 3.86
541 542 1.135972 GTACACATGTGCCTTGAAGCG 60.136 52.381 25.68 0.00 34.65 4.68
542 543 0.819259 ACACATGTGCCTTGAAGCGT 60.819 50.000 25.68 0.00 34.65 5.07
543 544 0.311790 CACATGTGCCTTGAAGCGTT 59.688 50.000 13.94 0.00 34.65 4.84
544 545 1.032014 ACATGTGCCTTGAAGCGTTT 58.968 45.000 0.00 0.00 34.65 3.60
545 546 1.269206 ACATGTGCCTTGAAGCGTTTG 60.269 47.619 0.00 0.00 34.65 2.93
546 547 1.032014 ATGTGCCTTGAAGCGTTTGT 58.968 45.000 0.00 0.00 34.65 2.83
547 548 1.669604 TGTGCCTTGAAGCGTTTGTA 58.330 45.000 0.00 0.00 34.65 2.41
548 549 2.226330 TGTGCCTTGAAGCGTTTGTAT 58.774 42.857 0.00 0.00 34.65 2.29
549 550 3.403968 TGTGCCTTGAAGCGTTTGTATA 58.596 40.909 0.00 0.00 34.65 1.47
550 551 3.187637 TGTGCCTTGAAGCGTTTGTATAC 59.812 43.478 0.00 0.00 34.65 1.47
551 552 3.435671 GTGCCTTGAAGCGTTTGTATACT 59.564 43.478 4.17 0.00 34.65 2.12
552 553 4.628333 GTGCCTTGAAGCGTTTGTATACTA 59.372 41.667 4.17 0.00 34.65 1.82
553 554 4.628333 TGCCTTGAAGCGTTTGTATACTAC 59.372 41.667 4.17 1.90 34.65 2.73
554 555 4.868734 GCCTTGAAGCGTTTGTATACTACT 59.131 41.667 4.17 0.00 0.00 2.57
555 556 5.220416 GCCTTGAAGCGTTTGTATACTACTG 60.220 44.000 4.17 1.61 0.00 2.74
556 557 5.291128 CCTTGAAGCGTTTGTATACTACTGG 59.709 44.000 4.17 0.00 0.00 4.00
557 558 5.395682 TGAAGCGTTTGTATACTACTGGT 57.604 39.130 4.17 2.96 0.00 4.00
558 559 5.165676 TGAAGCGTTTGTATACTACTGGTG 58.834 41.667 4.17 0.00 0.00 4.17
559 560 3.518590 AGCGTTTGTATACTACTGGTGC 58.481 45.455 4.17 2.28 0.00 5.01
560 561 3.194968 AGCGTTTGTATACTACTGGTGCT 59.805 43.478 4.17 4.28 0.00 4.40
561 562 3.930848 GCGTTTGTATACTACTGGTGCTT 59.069 43.478 4.17 0.00 0.00 3.91
562 563 5.104374 GCGTTTGTATACTACTGGTGCTTA 58.896 41.667 4.17 0.00 0.00 3.09
563 564 5.751990 GCGTTTGTATACTACTGGTGCTTAT 59.248 40.000 4.17 0.00 0.00 1.73
564 565 6.074463 GCGTTTGTATACTACTGGTGCTTATC 60.074 42.308 4.17 0.00 0.00 1.75
565 566 7.201145 CGTTTGTATACTACTGGTGCTTATCT 58.799 38.462 4.17 0.00 0.00 1.98
566 567 8.347771 CGTTTGTATACTACTGGTGCTTATCTA 58.652 37.037 4.17 0.00 0.00 1.98
702 703 4.477975 GCCGTCTCCGTCAGGTCG 62.478 72.222 0.00 0.00 39.05 4.79
937 938 4.537433 CTAGCTGTGGAGGGCGCC 62.537 72.222 21.18 21.18 0.00 6.53
1510 1511 5.103898 TGGGCATTTGTAGGTATGGTAATCA 60.104 40.000 0.00 0.00 0.00 2.57
1738 1741 3.246403 GCTCTCTGCTCTGCCTTTT 57.754 52.632 0.00 0.00 38.95 2.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 8.792633 GCTCTTGTATGACTTATCAGATCTAGT 58.207 37.037 0.00 0.00 38.57 2.57
9 10 7.962373 CGCTCTTGTATGACTTATCAGATCTAG 59.038 40.741 0.00 0.00 38.57 2.43
10 11 7.661847 TCGCTCTTGTATGACTTATCAGATCTA 59.338 37.037 0.00 0.00 38.57 1.98
11 12 6.488344 TCGCTCTTGTATGACTTATCAGATCT 59.512 38.462 0.00 0.00 38.57 2.75
12 13 6.673106 TCGCTCTTGTATGACTTATCAGATC 58.327 40.000 0.00 0.00 38.57 2.75
13 14 6.641169 TCGCTCTTGTATGACTTATCAGAT 57.359 37.500 0.00 0.00 38.57 2.90
14 15 6.641169 ATCGCTCTTGTATGACTTATCAGA 57.359 37.500 0.00 0.00 38.57 3.27
15 16 6.804295 GGTATCGCTCTTGTATGACTTATCAG 59.196 42.308 0.00 0.00 38.57 2.90
16 17 6.490381 AGGTATCGCTCTTGTATGACTTATCA 59.510 38.462 0.00 0.00 39.83 2.15
17 18 6.915349 AGGTATCGCTCTTGTATGACTTATC 58.085 40.000 0.00 0.00 0.00 1.75
18 19 6.902771 AGGTATCGCTCTTGTATGACTTAT 57.097 37.500 0.00 0.00 0.00 1.73
19 20 7.812690 TTAGGTATCGCTCTTGTATGACTTA 57.187 36.000 0.00 0.00 0.00 2.24
20 21 6.710597 TTAGGTATCGCTCTTGTATGACTT 57.289 37.500 0.00 0.00 0.00 3.01
21 22 6.902771 ATTAGGTATCGCTCTTGTATGACT 57.097 37.500 0.00 0.00 0.00 3.41
22 23 8.913656 GTTTATTAGGTATCGCTCTTGTATGAC 58.086 37.037 0.00 0.00 0.00 3.06
23 24 8.857098 AGTTTATTAGGTATCGCTCTTGTATGA 58.143 33.333 0.00 0.00 0.00 2.15
26 27 9.347240 ACTAGTTTATTAGGTATCGCTCTTGTA 57.653 33.333 0.00 0.00 0.00 2.41
27 28 8.235359 ACTAGTTTATTAGGTATCGCTCTTGT 57.765 34.615 0.00 0.00 0.00 3.16
28 29 9.828852 CTACTAGTTTATTAGGTATCGCTCTTG 57.171 37.037 0.00 0.00 0.00 3.02
29 30 9.571816 ACTACTAGTTTATTAGGTATCGCTCTT 57.428 33.333 0.00 0.00 0.00 2.85
39 40 9.604626 GCACGTACATACTACTAGTTTATTAGG 57.395 37.037 0.00 3.69 0.00 2.69
47 48 9.445878 ACATATATGCACGTACATACTACTAGT 57.554 33.333 10.64 0.00 35.42 2.57
48 49 9.704098 CACATATATGCACGTACATACTACTAG 57.296 37.037 10.64 1.86 35.42 2.57
49 50 9.223099 ACACATATATGCACGTACATACTACTA 57.777 33.333 10.64 0.54 35.42 1.82
50 51 8.107399 ACACATATATGCACGTACATACTACT 57.893 34.615 10.64 0.00 35.42 2.57
51 52 9.270576 GTACACATATATGCACGTACATACTAC 57.729 37.037 23.05 7.91 35.42 2.73
52 53 8.453320 GGTACACATATATGCACGTACATACTA 58.547 37.037 26.09 5.73 35.42 1.82
53 54 7.310664 GGTACACATATATGCACGTACATACT 58.689 38.462 26.09 3.87 35.42 2.12
54 55 6.249893 CGGTACACATATATGCACGTACATAC 59.750 42.308 26.09 16.12 35.42 2.39
55 56 6.149142 TCGGTACACATATATGCACGTACATA 59.851 38.462 26.09 10.82 35.06 2.29
56 57 5.048573 TCGGTACACATATATGCACGTACAT 60.049 40.000 26.09 6.50 35.06 2.29
57 58 4.275443 TCGGTACACATATATGCACGTACA 59.725 41.667 26.09 14.21 35.06 2.90
58 59 4.786507 TCGGTACACATATATGCACGTAC 58.213 43.478 21.37 21.37 33.79 3.67
59 60 5.632244 ATCGGTACACATATATGCACGTA 57.368 39.130 12.79 8.97 0.00 3.57
60 61 3.994204 TCGGTACACATATATGCACGT 57.006 42.857 12.79 9.89 0.00 4.49
61 62 6.019881 CCATAATCGGTACACATATATGCACG 60.020 42.308 12.79 9.96 0.00 5.34
62 63 6.257849 CCCATAATCGGTACACATATATGCAC 59.742 42.308 12.79 8.15 0.00 4.57
63 64 6.345298 CCCATAATCGGTACACATATATGCA 58.655 40.000 12.79 0.00 0.00 3.96
64 65 5.236478 GCCCATAATCGGTACACATATATGC 59.764 44.000 12.79 0.00 0.00 3.14
65 66 5.462068 CGCCCATAATCGGTACACATATATG 59.538 44.000 11.29 11.29 0.00 1.78
66 67 5.597806 CGCCCATAATCGGTACACATATAT 58.402 41.667 0.00 0.00 0.00 0.86
67 68 4.678574 GCGCCCATAATCGGTACACATATA 60.679 45.833 0.00 0.00 0.00 0.86
68 69 3.857052 CGCCCATAATCGGTACACATAT 58.143 45.455 0.00 0.00 0.00 1.78
69 70 2.610976 GCGCCCATAATCGGTACACATA 60.611 50.000 0.00 0.00 0.00 2.29
70 71 1.876416 GCGCCCATAATCGGTACACAT 60.876 52.381 0.00 0.00 0.00 3.21
71 72 0.531090 GCGCCCATAATCGGTACACA 60.531 55.000 0.00 0.00 0.00 3.72
72 73 1.226030 GGCGCCCATAATCGGTACAC 61.226 60.000 18.11 0.00 0.00 2.90
73 74 1.070105 GGCGCCCATAATCGGTACA 59.930 57.895 18.11 0.00 0.00 2.90
74 75 2.025418 CGGCGCCCATAATCGGTAC 61.025 63.158 23.46 0.00 0.00 3.34
75 76 2.340809 CGGCGCCCATAATCGGTA 59.659 61.111 23.46 0.00 0.00 4.02
76 77 3.802418 GACGGCGCCCATAATCGGT 62.802 63.158 23.46 10.34 0.00 4.69
77 78 3.041940 GACGGCGCCCATAATCGG 61.042 66.667 23.46 6.49 0.00 4.18
78 79 3.403057 CGACGGCGCCCATAATCG 61.403 66.667 23.46 17.99 0.00 3.34
79 80 2.279918 ACGACGGCGCCCATAATC 60.280 61.111 23.46 9.95 42.48 1.75
80 81 2.279918 GACGACGGCGCCCATAAT 60.280 61.111 23.46 2.04 42.48 1.28
81 82 4.517815 GGACGACGGCGCCCATAA 62.518 66.667 23.46 0.00 40.09 1.90
102 103 1.913762 CTACCCTCCCTATGGCCGG 60.914 68.421 0.00 0.00 0.00 6.13
103 104 1.913762 CCTACCCTCCCTATGGCCG 60.914 68.421 0.00 0.00 0.00 6.13
104 105 1.539124 CCCTACCCTCCCTATGGCC 60.539 68.421 0.00 0.00 0.00 5.36
105 106 0.119358 ATCCCTACCCTCCCTATGGC 59.881 60.000 0.00 0.00 0.00 4.40
106 107 1.152271 ACATCCCTACCCTCCCTATGG 59.848 57.143 0.00 0.00 0.00 2.74
107 108 2.639839 CAACATCCCTACCCTCCCTATG 59.360 54.545 0.00 0.00 0.00 2.23
108 109 2.527057 TCAACATCCCTACCCTCCCTAT 59.473 50.000 0.00 0.00 0.00 2.57
109 110 1.941682 TCAACATCCCTACCCTCCCTA 59.058 52.381 0.00 0.00 0.00 3.53
110 111 0.722676 TCAACATCCCTACCCTCCCT 59.277 55.000 0.00 0.00 0.00 4.20
111 112 1.490910 CTTCAACATCCCTACCCTCCC 59.509 57.143 0.00 0.00 0.00 4.30
112 113 2.478292 TCTTCAACATCCCTACCCTCC 58.522 52.381 0.00 0.00 0.00 4.30
113 114 3.679083 CGTTCTTCAACATCCCTACCCTC 60.679 52.174 0.00 0.00 32.14 4.30
114 115 2.236395 CGTTCTTCAACATCCCTACCCT 59.764 50.000 0.00 0.00 32.14 4.34
115 116 2.629051 CGTTCTTCAACATCCCTACCC 58.371 52.381 0.00 0.00 32.14 3.69
116 117 2.629051 CCGTTCTTCAACATCCCTACC 58.371 52.381 0.00 0.00 32.14 3.18
117 118 2.007608 GCCGTTCTTCAACATCCCTAC 58.992 52.381 0.00 0.00 32.14 3.18
118 119 1.065709 GGCCGTTCTTCAACATCCCTA 60.066 52.381 0.00 0.00 32.14 3.53
119 120 0.322546 GGCCGTTCTTCAACATCCCT 60.323 55.000 0.00 0.00 32.14 4.20
120 121 1.644786 CGGCCGTTCTTCAACATCCC 61.645 60.000 19.50 0.00 32.14 3.85
121 122 1.644786 CCGGCCGTTCTTCAACATCC 61.645 60.000 26.12 0.00 32.14 3.51
122 123 1.794222 CCGGCCGTTCTTCAACATC 59.206 57.895 26.12 0.00 32.14 3.06
123 124 2.332654 GCCGGCCGTTCTTCAACAT 61.333 57.895 26.12 0.00 32.14 2.71
124 125 2.975799 GCCGGCCGTTCTTCAACA 60.976 61.111 26.12 0.00 32.14 3.33
125 126 3.733960 GGCCGGCCGTTCTTCAAC 61.734 66.667 33.60 2.25 0.00 3.18
126 127 4.257654 TGGCCGGCCGTTCTTCAA 62.258 61.111 39.00 17.87 39.42 2.69
127 128 4.697756 CTGGCCGGCCGTTCTTCA 62.698 66.667 39.00 20.00 39.42 3.02
128 129 4.699522 ACTGGCCGGCCGTTCTTC 62.700 66.667 39.00 15.47 39.42 2.87
129 130 4.699522 GACTGGCCGGCCGTTCTT 62.700 66.667 39.00 21.51 39.42 2.52
173 174 4.632974 CAGCTCCCTATGGCCGCC 62.633 72.222 1.04 1.04 0.00 6.13
175 176 4.976925 CGCAGCTCCCTATGGCCG 62.977 72.222 0.00 0.00 0.00 6.13
176 177 4.632974 CCGCAGCTCCCTATGGCC 62.633 72.222 0.00 0.00 0.00 5.36
177 178 3.406595 AACCGCAGCTCCCTATGGC 62.407 63.158 0.00 0.00 0.00 4.40
178 179 1.227674 GAACCGCAGCTCCCTATGG 60.228 63.158 0.00 0.00 0.00 2.74
179 180 1.227674 GGAACCGCAGCTCCCTATG 60.228 63.158 0.00 0.00 0.00 2.23
180 181 1.056700 ATGGAACCGCAGCTCCCTAT 61.057 55.000 0.00 0.00 0.00 2.57
181 182 1.271840 AATGGAACCGCAGCTCCCTA 61.272 55.000 0.00 0.00 0.00 3.53
182 183 2.142292 AAATGGAACCGCAGCTCCCT 62.142 55.000 0.00 0.00 0.00 4.20
183 184 1.250840 AAAATGGAACCGCAGCTCCC 61.251 55.000 0.00 0.00 0.00 4.30
184 185 0.109132 CAAAATGGAACCGCAGCTCC 60.109 55.000 0.00 0.00 0.00 4.70
185 186 0.733909 GCAAAATGGAACCGCAGCTC 60.734 55.000 0.00 0.00 0.00 4.09
186 187 1.181098 AGCAAAATGGAACCGCAGCT 61.181 50.000 0.00 0.00 0.00 4.24
187 188 1.010419 CAGCAAAATGGAACCGCAGC 61.010 55.000 0.00 0.00 0.00 5.25
188 189 1.010419 GCAGCAAAATGGAACCGCAG 61.010 55.000 0.00 0.00 0.00 5.18
189 190 1.006337 GCAGCAAAATGGAACCGCA 60.006 52.632 0.00 0.00 0.00 5.69
190 191 1.006337 TGCAGCAAAATGGAACCGC 60.006 52.632 0.00 0.00 0.00 5.68
191 192 1.010419 GCTGCAGCAAAATGGAACCG 61.010 55.000 33.36 0.00 41.59 4.44
192 193 0.319405 AGCTGCAGCAAAATGGAACC 59.681 50.000 38.24 6.46 45.16 3.62
193 194 2.416431 CCTAGCTGCAGCAAAATGGAAC 60.416 50.000 38.24 7.01 45.16 3.62
194 195 1.820519 CCTAGCTGCAGCAAAATGGAA 59.179 47.619 38.24 12.97 45.16 3.53
195 196 1.466856 CCTAGCTGCAGCAAAATGGA 58.533 50.000 38.24 14.15 45.16 3.41
196 197 0.458669 CCCTAGCTGCAGCAAAATGG 59.541 55.000 38.24 28.02 45.16 3.16
197 198 1.466856 TCCCTAGCTGCAGCAAAATG 58.533 50.000 38.24 22.24 45.16 2.32
198 199 2.029623 CATCCCTAGCTGCAGCAAAAT 58.970 47.619 38.24 21.51 45.16 1.82
199 200 1.272092 ACATCCCTAGCTGCAGCAAAA 60.272 47.619 38.24 22.51 45.16 2.44
200 201 0.329261 ACATCCCTAGCTGCAGCAAA 59.671 50.000 38.24 24.99 45.16 3.68
201 202 0.329261 AACATCCCTAGCTGCAGCAA 59.671 50.000 38.24 19.02 45.16 3.91
202 203 0.393402 CAACATCCCTAGCTGCAGCA 60.393 55.000 38.24 23.25 45.16 4.41
203 204 0.107508 TCAACATCCCTAGCTGCAGC 60.108 55.000 31.53 31.53 42.49 5.25
204 205 2.408271 TTCAACATCCCTAGCTGCAG 57.592 50.000 10.11 10.11 0.00 4.41
205 206 2.025981 ACATTCAACATCCCTAGCTGCA 60.026 45.455 1.02 0.00 0.00 4.41
206 207 2.357009 CACATTCAACATCCCTAGCTGC 59.643 50.000 0.00 0.00 0.00 5.25
207 208 3.875727 CTCACATTCAACATCCCTAGCTG 59.124 47.826 0.00 0.00 0.00 4.24
208 209 3.118112 CCTCACATTCAACATCCCTAGCT 60.118 47.826 0.00 0.00 0.00 3.32
209 210 3.209410 CCTCACATTCAACATCCCTAGC 58.791 50.000 0.00 0.00 0.00 3.42
210 211 3.209410 GCCTCACATTCAACATCCCTAG 58.791 50.000 0.00 0.00 0.00 3.02
211 212 2.092429 GGCCTCACATTCAACATCCCTA 60.092 50.000 0.00 0.00 0.00 3.53
212 213 1.341383 GGCCTCACATTCAACATCCCT 60.341 52.381 0.00 0.00 0.00 4.20
213 214 1.106285 GGCCTCACATTCAACATCCC 58.894 55.000 0.00 0.00 0.00 3.85
214 215 0.734889 CGGCCTCACATTCAACATCC 59.265 55.000 0.00 0.00 0.00 3.51
215 216 0.734889 CCGGCCTCACATTCAACATC 59.265 55.000 0.00 0.00 0.00 3.06
216 217 0.680921 CCCGGCCTCACATTCAACAT 60.681 55.000 0.00 0.00 0.00 2.71
217 218 1.303236 CCCGGCCTCACATTCAACA 60.303 57.895 0.00 0.00 0.00 3.33
218 219 0.394352 ATCCCGGCCTCACATTCAAC 60.394 55.000 0.00 0.00 0.00 3.18
219 220 1.140852 CTATCCCGGCCTCACATTCAA 59.859 52.381 0.00 0.00 0.00 2.69
220 221 0.758734 CTATCCCGGCCTCACATTCA 59.241 55.000 0.00 0.00 0.00 2.57
221 222 0.035458 CCTATCCCGGCCTCACATTC 59.965 60.000 0.00 0.00 0.00 2.67
222 223 0.694444 ACCTATCCCGGCCTCACATT 60.694 55.000 0.00 0.00 0.00 2.71
223 224 0.694444 AACCTATCCCGGCCTCACAT 60.694 55.000 0.00 0.00 0.00 3.21
224 225 1.306654 AACCTATCCCGGCCTCACA 60.307 57.895 0.00 0.00 0.00 3.58
225 226 1.146263 CAACCTATCCCGGCCTCAC 59.854 63.158 0.00 0.00 0.00 3.51
226 227 2.070039 CCAACCTATCCCGGCCTCA 61.070 63.158 0.00 0.00 0.00 3.86
227 228 2.819284 CCCAACCTATCCCGGCCTC 61.819 68.421 0.00 0.00 0.00 4.70
228 229 2.772622 CCCAACCTATCCCGGCCT 60.773 66.667 0.00 0.00 0.00 5.19
229 230 3.886001 CCCCAACCTATCCCGGCC 61.886 72.222 0.00 0.00 0.00 6.13
230 231 3.886001 CCCCCAACCTATCCCGGC 61.886 72.222 0.00 0.00 0.00 6.13
231 232 0.695122 TAACCCCCAACCTATCCCGG 60.695 60.000 0.00 0.00 0.00 5.73
232 233 1.215140 TTAACCCCCAACCTATCCCG 58.785 55.000 0.00 0.00 0.00 5.14
233 234 3.572642 CATTTAACCCCCAACCTATCCC 58.427 50.000 0.00 0.00 0.00 3.85
234 235 3.572642 CCATTTAACCCCCAACCTATCC 58.427 50.000 0.00 0.00 0.00 2.59
235 236 2.963101 GCCATTTAACCCCCAACCTATC 59.037 50.000 0.00 0.00 0.00 2.08
236 237 2.590137 AGCCATTTAACCCCCAACCTAT 59.410 45.455 0.00 0.00 0.00 2.57
237 238 2.004589 AGCCATTTAACCCCCAACCTA 58.995 47.619 0.00 0.00 0.00 3.08
238 239 0.790339 AGCCATTTAACCCCCAACCT 59.210 50.000 0.00 0.00 0.00 3.50
239 240 0.901827 CAGCCATTTAACCCCCAACC 59.098 55.000 0.00 0.00 0.00 3.77
240 241 0.249120 GCAGCCATTTAACCCCCAAC 59.751 55.000 0.00 0.00 0.00 3.77
241 242 0.907230 GGCAGCCATTTAACCCCCAA 60.907 55.000 6.55 0.00 0.00 4.12
242 243 1.305718 GGCAGCCATTTAACCCCCA 60.306 57.895 6.55 0.00 0.00 4.96
243 244 2.423064 CGGCAGCCATTTAACCCCC 61.423 63.158 13.30 0.00 0.00 5.40
244 245 2.423064 CCGGCAGCCATTTAACCCC 61.423 63.158 13.30 0.00 0.00 4.95
245 246 2.423064 CCCGGCAGCCATTTAACCC 61.423 63.158 13.30 0.00 0.00 4.11
246 247 3.076258 GCCCGGCAGCCATTTAACC 62.076 63.158 13.30 0.00 0.00 2.85
247 248 2.347322 TGCCCGGCAGCCATTTAAC 61.347 57.895 13.30 0.00 33.32 2.01
248 249 2.036414 TGCCCGGCAGCCATTTAA 59.964 55.556 13.30 0.00 33.32 1.52
257 258 3.636231 ACTTGTAGCTGCCCGGCA 61.636 61.111 12.67 12.67 36.92 5.69
258 259 3.127533 CACTTGTAGCTGCCCGGC 61.128 66.667 1.04 1.04 0.00 6.13
259 260 2.436646 CCACTTGTAGCTGCCCGG 60.437 66.667 0.00 0.00 0.00 5.73
260 261 3.127533 GCCACTTGTAGCTGCCCG 61.128 66.667 0.00 0.00 0.00 6.13
261 262 1.589716 CTTGCCACTTGTAGCTGCCC 61.590 60.000 0.00 0.00 0.00 5.36
262 263 0.606401 TCTTGCCACTTGTAGCTGCC 60.606 55.000 0.00 0.00 0.00 4.85
263 264 1.238439 TTCTTGCCACTTGTAGCTGC 58.762 50.000 0.00 0.00 0.00 5.25
264 265 2.349817 CGTTTCTTGCCACTTGTAGCTG 60.350 50.000 0.00 0.00 0.00 4.24
265 266 1.873591 CGTTTCTTGCCACTTGTAGCT 59.126 47.619 0.00 0.00 0.00 3.32
266 267 1.663161 GCGTTTCTTGCCACTTGTAGC 60.663 52.381 0.00 0.00 0.00 3.58
267 268 1.873591 AGCGTTTCTTGCCACTTGTAG 59.126 47.619 0.00 0.00 0.00 2.74
268 269 1.601903 CAGCGTTTCTTGCCACTTGTA 59.398 47.619 0.00 0.00 0.00 2.41
269 270 0.381801 CAGCGTTTCTTGCCACTTGT 59.618 50.000 0.00 0.00 0.00 3.16
270 271 0.381801 ACAGCGTTTCTTGCCACTTG 59.618 50.000 0.00 0.00 0.00 3.16
271 272 1.961793 TACAGCGTTTCTTGCCACTT 58.038 45.000 0.00 0.00 0.00 3.16
272 273 2.076863 GATACAGCGTTTCTTGCCACT 58.923 47.619 0.00 0.00 0.00 4.00
273 274 1.201921 CGATACAGCGTTTCTTGCCAC 60.202 52.381 0.00 0.00 0.00 5.01
274 275 1.075542 CGATACAGCGTTTCTTGCCA 58.924 50.000 0.00 0.00 0.00 4.92
275 276 1.355971 TCGATACAGCGTTTCTTGCC 58.644 50.000 0.00 0.00 0.00 4.52
276 277 2.033662 GGATCGATACAGCGTTTCTTGC 60.034 50.000 1.67 0.00 0.00 4.01
277 278 3.186909 TGGATCGATACAGCGTTTCTTG 58.813 45.455 6.12 0.00 0.00 3.02
278 279 3.520290 TGGATCGATACAGCGTTTCTT 57.480 42.857 6.12 0.00 0.00 2.52
279 280 3.187700 GTTGGATCGATACAGCGTTTCT 58.812 45.455 10.87 0.00 0.00 2.52
280 281 2.034842 CGTTGGATCGATACAGCGTTTC 60.035 50.000 31.54 10.54 39.98 2.78
281 282 1.924524 CGTTGGATCGATACAGCGTTT 59.075 47.619 31.54 0.00 39.98 3.60
282 283 1.556564 CGTTGGATCGATACAGCGTT 58.443 50.000 31.54 0.00 39.98 4.84
283 284 0.248907 CCGTTGGATCGATACAGCGT 60.249 55.000 34.95 0.00 42.78 5.07
284 285 0.030235 TCCGTTGGATCGATACAGCG 59.970 55.000 32.55 32.55 43.75 5.18
285 286 2.218953 TTCCGTTGGATCGATACAGC 57.781 50.000 14.09 14.09 0.00 4.40
286 287 3.494626 CCATTTCCGTTGGATCGATACAG 59.505 47.826 10.87 0.00 36.26 2.74
287 288 3.133183 TCCATTTCCGTTGGATCGATACA 59.867 43.478 6.12 6.12 38.35 2.29
288 289 3.724374 TCCATTTCCGTTGGATCGATAC 58.276 45.455 0.00 0.00 38.35 2.24
289 290 4.409718 TTCCATTTCCGTTGGATCGATA 57.590 40.909 0.00 0.00 42.69 2.92
290 291 3.275617 TTCCATTTCCGTTGGATCGAT 57.724 42.857 0.00 0.00 42.69 3.59
291 292 2.772077 TTCCATTTCCGTTGGATCGA 57.228 45.000 0.00 0.00 42.69 3.59
292 293 2.097466 CCTTTCCATTTCCGTTGGATCG 59.903 50.000 0.00 0.00 42.69 3.69
293 294 3.089284 ACCTTTCCATTTCCGTTGGATC 58.911 45.455 0.00 0.00 42.69 3.36
294 295 2.825532 CACCTTTCCATTTCCGTTGGAT 59.174 45.455 0.00 0.00 42.69 3.41
295 296 2.235016 CACCTTTCCATTTCCGTTGGA 58.765 47.619 0.00 0.00 41.50 3.53
296 297 1.272212 CCACCTTTCCATTTCCGTTGG 59.728 52.381 0.00 0.00 35.45 3.77
297 298 2.235016 TCCACCTTTCCATTTCCGTTG 58.765 47.619 0.00 0.00 0.00 4.10
298 299 2.668144 TCCACCTTTCCATTTCCGTT 57.332 45.000 0.00 0.00 0.00 4.44
299 300 2.668144 TTCCACCTTTCCATTTCCGT 57.332 45.000 0.00 0.00 0.00 4.69
300 301 3.368323 CCATTTCCACCTTTCCATTTCCG 60.368 47.826 0.00 0.00 0.00 4.30
301 302 3.837731 TCCATTTCCACCTTTCCATTTCC 59.162 43.478 0.00 0.00 0.00 3.13
302 303 4.081476 CCTCCATTTCCACCTTTCCATTTC 60.081 45.833 0.00 0.00 0.00 2.17
303 304 3.840078 CCTCCATTTCCACCTTTCCATTT 59.160 43.478 0.00 0.00 0.00 2.32
304 305 3.077391 TCCTCCATTTCCACCTTTCCATT 59.923 43.478 0.00 0.00 0.00 3.16
305 306 2.654385 TCCTCCATTTCCACCTTTCCAT 59.346 45.455 0.00 0.00 0.00 3.41
306 307 2.069775 TCCTCCATTTCCACCTTTCCA 58.930 47.619 0.00 0.00 0.00 3.53
307 308 2.826128 GTTCCTCCATTTCCACCTTTCC 59.174 50.000 0.00 0.00 0.00 3.13
308 309 3.496331 TGTTCCTCCATTTCCACCTTTC 58.504 45.455 0.00 0.00 0.00 2.62
309 310 3.500343 CTGTTCCTCCATTTCCACCTTT 58.500 45.455 0.00 0.00 0.00 3.11
310 311 2.819348 GCTGTTCCTCCATTTCCACCTT 60.819 50.000 0.00 0.00 0.00 3.50
311 312 1.272147 GCTGTTCCTCCATTTCCACCT 60.272 52.381 0.00 0.00 0.00 4.00
312 313 1.177401 GCTGTTCCTCCATTTCCACC 58.823 55.000 0.00 0.00 0.00 4.61
313 314 2.087646 GAGCTGTTCCTCCATTTCCAC 58.912 52.381 0.00 0.00 0.00 4.02
314 315 1.704628 TGAGCTGTTCCTCCATTTCCA 59.295 47.619 0.00 0.00 0.00 3.53
315 316 2.087646 GTGAGCTGTTCCTCCATTTCC 58.912 52.381 0.00 0.00 0.00 3.13
316 317 2.485814 GTGTGAGCTGTTCCTCCATTTC 59.514 50.000 0.00 0.00 0.00 2.17
317 318 2.508526 GTGTGAGCTGTTCCTCCATTT 58.491 47.619 0.00 0.00 0.00 2.32
318 319 1.609061 CGTGTGAGCTGTTCCTCCATT 60.609 52.381 0.00 0.00 0.00 3.16
319 320 0.036952 CGTGTGAGCTGTTCCTCCAT 60.037 55.000 0.00 0.00 0.00 3.41
320 321 1.367471 CGTGTGAGCTGTTCCTCCA 59.633 57.895 0.00 0.00 0.00 3.86
321 322 2.029844 GCGTGTGAGCTGTTCCTCC 61.030 63.158 0.00 0.00 0.00 4.30
322 323 2.375766 CGCGTGTGAGCTGTTCCTC 61.376 63.158 0.00 0.00 34.40 3.71
323 324 2.356313 CGCGTGTGAGCTGTTCCT 60.356 61.111 0.00 0.00 34.40 3.36
324 325 2.355837 TCGCGTGTGAGCTGTTCC 60.356 61.111 5.77 0.00 34.40 3.62
325 326 2.846918 GTCGCGTGTGAGCTGTTC 59.153 61.111 5.77 0.00 34.40 3.18
326 327 3.030308 CGTCGCGTGTGAGCTGTT 61.030 61.111 5.77 0.00 34.40 3.16
327 328 3.881092 CTCGTCGCGTGTGAGCTGT 62.881 63.158 5.77 0.00 34.40 4.40
328 329 2.857380 ATCTCGTCGCGTGTGAGCTG 62.857 60.000 5.77 0.00 34.40 4.24
329 330 2.201436 AATCTCGTCGCGTGTGAGCT 62.201 55.000 5.77 0.63 34.40 4.09
330 331 0.522705 TAATCTCGTCGCGTGTGAGC 60.523 55.000 5.77 0.00 0.00 4.26
331 332 1.202043 ACTAATCTCGTCGCGTGTGAG 60.202 52.381 5.77 12.09 0.00 3.51
332 333 0.800631 ACTAATCTCGTCGCGTGTGA 59.199 50.000 5.77 7.16 0.00 3.58
333 334 1.614385 AACTAATCTCGTCGCGTGTG 58.386 50.000 5.77 1.15 0.00 3.82
334 335 3.687572 ATAACTAATCTCGTCGCGTGT 57.312 42.857 5.77 0.00 0.00 4.49
335 336 3.592799 CGTATAACTAATCTCGTCGCGTG 59.407 47.826 5.77 0.00 0.00 5.34
336 337 3.363378 CCGTATAACTAATCTCGTCGCGT 60.363 47.826 5.77 0.00 0.00 6.01
337 338 3.151481 CCGTATAACTAATCTCGTCGCG 58.849 50.000 0.00 0.00 0.00 5.87
338 339 2.907392 GCCGTATAACTAATCTCGTCGC 59.093 50.000 0.00 0.00 0.00 5.19
339 340 3.058708 TGGCCGTATAACTAATCTCGTCG 60.059 47.826 0.00 0.00 0.00 5.12
340 341 4.214971 TCTGGCCGTATAACTAATCTCGTC 59.785 45.833 0.00 0.00 0.00 4.20
341 342 4.139786 TCTGGCCGTATAACTAATCTCGT 58.860 43.478 0.00 0.00 0.00 4.18
342 343 4.761235 TCTGGCCGTATAACTAATCTCG 57.239 45.455 0.00 0.00 0.00 4.04
343 344 5.864474 CACATCTGGCCGTATAACTAATCTC 59.136 44.000 0.00 0.00 0.00 2.75
344 345 5.538813 TCACATCTGGCCGTATAACTAATCT 59.461 40.000 0.00 0.00 0.00 2.40
345 346 5.779922 TCACATCTGGCCGTATAACTAATC 58.220 41.667 0.00 0.00 0.00 1.75
346 347 5.801531 TCACATCTGGCCGTATAACTAAT 57.198 39.130 0.00 0.00 0.00 1.73
347 348 5.801531 ATCACATCTGGCCGTATAACTAA 57.198 39.130 0.00 0.00 0.00 2.24
348 349 5.801531 AATCACATCTGGCCGTATAACTA 57.198 39.130 0.00 0.00 0.00 2.24
349 350 4.689612 AATCACATCTGGCCGTATAACT 57.310 40.909 0.00 0.00 0.00 2.24
350 351 5.558273 CGAAAATCACATCTGGCCGTATAAC 60.558 44.000 0.00 0.00 0.00 1.89
351 352 4.509970 CGAAAATCACATCTGGCCGTATAA 59.490 41.667 0.00 0.00 0.00 0.98
352 353 4.055360 CGAAAATCACATCTGGCCGTATA 58.945 43.478 0.00 0.00 0.00 1.47
353 354 2.872245 CGAAAATCACATCTGGCCGTAT 59.128 45.455 0.00 0.00 0.00 3.06
354 355 2.276201 CGAAAATCACATCTGGCCGTA 58.724 47.619 0.00 0.00 0.00 4.02
355 356 1.086696 CGAAAATCACATCTGGCCGT 58.913 50.000 0.00 0.00 0.00 5.68
356 357 1.086696 ACGAAAATCACATCTGGCCG 58.913 50.000 0.00 0.00 0.00 6.13
357 358 2.083774 TCACGAAAATCACATCTGGCC 58.916 47.619 0.00 0.00 0.00 5.36
358 359 5.484173 TTATCACGAAAATCACATCTGGC 57.516 39.130 0.00 0.00 0.00 4.85
359 360 7.374228 CGAATTTATCACGAAAATCACATCTGG 59.626 37.037 0.00 0.00 0.00 3.86
360 361 8.116136 TCGAATTTATCACGAAAATCACATCTG 58.884 33.333 0.00 0.00 33.20 2.90
361 362 8.196802 TCGAATTTATCACGAAAATCACATCT 57.803 30.769 0.00 0.00 33.20 2.90
362 363 8.993852 ATCGAATTTATCACGAAAATCACATC 57.006 30.769 0.00 0.00 39.38 3.06
363 364 8.611757 TGATCGAATTTATCACGAAAATCACAT 58.388 29.630 0.00 0.00 39.38 3.21
364 365 7.969314 TGATCGAATTTATCACGAAAATCACA 58.031 30.769 0.00 0.00 39.38 3.58
365 366 8.993852 ATGATCGAATTTATCACGAAAATCAC 57.006 30.769 6.58 0.00 39.38 3.06
370 371 9.914923 CAGTAAATGATCGAATTTATCACGAAA 57.085 29.630 5.76 0.00 39.38 3.46
371 372 9.308318 TCAGTAAATGATCGAATTTATCACGAA 57.692 29.630 5.76 0.00 39.38 3.85
372 373 8.865590 TCAGTAAATGATCGAATTTATCACGA 57.134 30.769 5.76 0.00 36.24 4.35
373 374 9.521179 CATCAGTAAATGATCGAATTTATCACG 57.479 33.333 5.76 0.00 46.01 4.35
374 375 9.817365 CCATCAGTAAATGATCGAATTTATCAC 57.183 33.333 5.76 0.00 46.01 3.06
375 376 9.777297 TCCATCAGTAAATGATCGAATTTATCA 57.223 29.630 5.76 6.83 46.01 2.15
378 379 8.506437 GCATCCATCAGTAAATGATCGAATTTA 58.494 33.333 0.00 0.00 46.01 1.40
379 380 7.365741 GCATCCATCAGTAAATGATCGAATTT 58.634 34.615 0.00 0.00 46.01 1.82
380 381 6.072286 GGCATCCATCAGTAAATGATCGAATT 60.072 38.462 0.00 0.00 46.01 2.17
381 382 5.413833 GGCATCCATCAGTAAATGATCGAAT 59.586 40.000 0.00 0.00 46.01 3.34
382 383 4.756642 GGCATCCATCAGTAAATGATCGAA 59.243 41.667 0.00 0.00 46.01 3.71
383 384 4.202346 TGGCATCCATCAGTAAATGATCGA 60.202 41.667 0.00 0.00 46.01 3.59
384 385 4.067192 TGGCATCCATCAGTAAATGATCG 58.933 43.478 0.00 0.00 46.01 3.69
385 386 6.585695 ATTGGCATCCATCAGTAAATGATC 57.414 37.500 0.00 0.00 46.01 2.92
387 388 4.516321 CGATTGGCATCCATCAGTAAATGA 59.484 41.667 0.00 0.00 43.70 2.57
388 389 4.276678 ACGATTGGCATCCATCAGTAAATG 59.723 41.667 0.00 0.00 31.53 2.32
389 390 4.464008 ACGATTGGCATCCATCAGTAAAT 58.536 39.130 0.00 0.00 31.53 1.40
390 391 3.884895 ACGATTGGCATCCATCAGTAAA 58.115 40.909 0.00 0.00 31.53 2.01
391 392 3.558931 ACGATTGGCATCCATCAGTAA 57.441 42.857 0.00 0.00 31.53 2.24
392 393 4.563374 CCATACGATTGGCATCCATCAGTA 60.563 45.833 0.00 0.00 31.53 2.74
393 394 3.405831 CATACGATTGGCATCCATCAGT 58.594 45.455 0.00 0.00 31.53 3.41
394 395 2.745821 CCATACGATTGGCATCCATCAG 59.254 50.000 0.00 0.00 31.53 2.90
395 396 2.781923 CCATACGATTGGCATCCATCA 58.218 47.619 0.00 0.00 31.53 3.07
404 405 3.243501 CCAAATGAAGGCCATACGATTGG 60.244 47.826 5.01 8.66 34.77 3.16
405 406 3.631686 TCCAAATGAAGGCCATACGATTG 59.368 43.478 5.01 2.76 34.45 2.67
406 407 3.885297 CTCCAAATGAAGGCCATACGATT 59.115 43.478 5.01 0.00 34.45 3.34
407 408 3.136443 TCTCCAAATGAAGGCCATACGAT 59.864 43.478 5.01 0.00 34.45 3.73
408 409 2.503765 TCTCCAAATGAAGGCCATACGA 59.496 45.455 5.01 0.00 34.45 3.43
409 410 2.614057 GTCTCCAAATGAAGGCCATACG 59.386 50.000 5.01 0.00 34.45 3.06
410 411 2.952310 GGTCTCCAAATGAAGGCCATAC 59.048 50.000 5.01 0.00 34.45 2.39
411 412 2.421388 CGGTCTCCAAATGAAGGCCATA 60.421 50.000 5.01 0.00 34.45 2.74
412 413 1.683011 CGGTCTCCAAATGAAGGCCAT 60.683 52.381 5.01 0.00 36.99 4.40
413 414 0.322456 CGGTCTCCAAATGAAGGCCA 60.322 55.000 5.01 0.00 0.00 5.36
414 415 1.032114 CCGGTCTCCAAATGAAGGCC 61.032 60.000 0.00 0.00 0.00 5.19
415 416 0.322546 ACCGGTCTCCAAATGAAGGC 60.323 55.000 0.00 0.00 0.00 4.35
416 417 2.084546 GAACCGGTCTCCAAATGAAGG 58.915 52.381 8.04 0.00 0.00 3.46
417 418 2.778299 TGAACCGGTCTCCAAATGAAG 58.222 47.619 8.04 0.00 0.00 3.02
418 419 2.940994 TGAACCGGTCTCCAAATGAA 57.059 45.000 8.04 0.00 0.00 2.57
419 420 3.517901 ACTATGAACCGGTCTCCAAATGA 59.482 43.478 8.04 0.00 0.00 2.57
420 421 3.873910 ACTATGAACCGGTCTCCAAATG 58.126 45.455 8.04 4.28 0.00 2.32
421 422 4.101119 CCTACTATGAACCGGTCTCCAAAT 59.899 45.833 8.04 0.00 0.00 2.32
422 423 3.449737 CCTACTATGAACCGGTCTCCAAA 59.550 47.826 8.04 0.00 0.00 3.28
423 424 3.028850 CCTACTATGAACCGGTCTCCAA 58.971 50.000 8.04 0.00 0.00 3.53
424 425 2.024655 ACCTACTATGAACCGGTCTCCA 60.025 50.000 8.04 7.20 0.00 3.86
425 426 2.664015 ACCTACTATGAACCGGTCTCC 58.336 52.381 8.04 0.30 0.00 3.71
426 427 4.886489 ACTTACCTACTATGAACCGGTCTC 59.114 45.833 8.04 8.75 0.00 3.36
427 428 4.643784 CACTTACCTACTATGAACCGGTCT 59.356 45.833 8.04 0.00 0.00 3.85
428 429 4.400567 ACACTTACCTACTATGAACCGGTC 59.599 45.833 8.04 1.72 0.00 4.79
429 430 4.159135 CACACTTACCTACTATGAACCGGT 59.841 45.833 0.00 0.00 0.00 5.28
430 431 4.159135 ACACACTTACCTACTATGAACCGG 59.841 45.833 0.00 0.00 0.00 5.28
431 432 5.100259 CACACACTTACCTACTATGAACCG 58.900 45.833 0.00 0.00 0.00 4.44
432 433 4.868734 GCACACACTTACCTACTATGAACC 59.131 45.833 0.00 0.00 0.00 3.62
433 434 5.475719 TGCACACACTTACCTACTATGAAC 58.524 41.667 0.00 0.00 0.00 3.18
434 435 5.731957 TGCACACACTTACCTACTATGAA 57.268 39.130 0.00 0.00 0.00 2.57
435 436 5.395214 CCATGCACACACTTACCTACTATGA 60.395 44.000 0.00 0.00 0.00 2.15
436 437 4.811024 CCATGCACACACTTACCTACTATG 59.189 45.833 0.00 0.00 0.00 2.23
437 438 4.714802 TCCATGCACACACTTACCTACTAT 59.285 41.667 0.00 0.00 0.00 2.12
438 439 4.090819 TCCATGCACACACTTACCTACTA 58.909 43.478 0.00 0.00 0.00 1.82
439 440 2.903784 TCCATGCACACACTTACCTACT 59.096 45.455 0.00 0.00 0.00 2.57
440 441 3.328382 TCCATGCACACACTTACCTAC 57.672 47.619 0.00 0.00 0.00 3.18
441 442 4.260985 CATTCCATGCACACACTTACCTA 58.739 43.478 0.00 0.00 0.00 3.08
442 443 2.949177 TTCCATGCACACACTTACCT 57.051 45.000 0.00 0.00 0.00 3.08
443 444 2.819608 ACATTCCATGCACACACTTACC 59.180 45.455 0.00 0.00 0.00 2.85
444 445 3.501828 TCACATTCCATGCACACACTTAC 59.498 43.478 0.00 0.00 0.00 2.34
445 446 3.749226 TCACATTCCATGCACACACTTA 58.251 40.909 0.00 0.00 0.00 2.24
446 447 2.585330 TCACATTCCATGCACACACTT 58.415 42.857 0.00 0.00 0.00 3.16
447 448 2.275134 TCACATTCCATGCACACACT 57.725 45.000 0.00 0.00 0.00 3.55
448 449 2.416296 CCATCACATTCCATGCACACAC 60.416 50.000 0.00 0.00 0.00 3.82
449 450 1.819903 CCATCACATTCCATGCACACA 59.180 47.619 0.00 0.00 0.00 3.72
450 451 2.093890 TCCATCACATTCCATGCACAC 58.906 47.619 0.00 0.00 0.00 3.82
451 452 2.510928 TCCATCACATTCCATGCACA 57.489 45.000 0.00 0.00 0.00 4.57
452 453 2.480759 GCTTCCATCACATTCCATGCAC 60.481 50.000 0.00 0.00 0.00 4.57
453 454 1.752498 GCTTCCATCACATTCCATGCA 59.248 47.619 0.00 0.00 0.00 3.96
454 455 1.752498 TGCTTCCATCACATTCCATGC 59.248 47.619 0.00 0.00 0.00 4.06
455 456 3.284617 TCTGCTTCCATCACATTCCATG 58.715 45.455 0.00 0.00 0.00 3.66
456 457 3.657398 TCTGCTTCCATCACATTCCAT 57.343 42.857 0.00 0.00 0.00 3.41
457 458 3.054213 TCATCTGCTTCCATCACATTCCA 60.054 43.478 0.00 0.00 0.00 3.53
458 459 3.548770 TCATCTGCTTCCATCACATTCC 58.451 45.455 0.00 0.00 0.00 3.01
459 460 4.880120 TCTTCATCTGCTTCCATCACATTC 59.120 41.667 0.00 0.00 0.00 2.67
460 461 4.851843 TCTTCATCTGCTTCCATCACATT 58.148 39.130 0.00 0.00 0.00 2.71
461 462 4.498894 TCTTCATCTGCTTCCATCACAT 57.501 40.909 0.00 0.00 0.00 3.21
462 463 3.986996 TCTTCATCTGCTTCCATCACA 57.013 42.857 0.00 0.00 0.00 3.58
463 464 4.096081 CCTTTCTTCATCTGCTTCCATCAC 59.904 45.833 0.00 0.00 0.00 3.06
464 465 4.019051 TCCTTTCTTCATCTGCTTCCATCA 60.019 41.667 0.00 0.00 0.00 3.07
465 466 4.521146 TCCTTTCTTCATCTGCTTCCATC 58.479 43.478 0.00 0.00 0.00 3.51
466 467 4.018597 ACTCCTTTCTTCATCTGCTTCCAT 60.019 41.667 0.00 0.00 0.00 3.41
467 468 3.328931 ACTCCTTTCTTCATCTGCTTCCA 59.671 43.478 0.00 0.00 0.00 3.53
468 469 3.949132 ACTCCTTTCTTCATCTGCTTCC 58.051 45.455 0.00 0.00 0.00 3.46
469 470 4.379290 GCAACTCCTTTCTTCATCTGCTTC 60.379 45.833 0.00 0.00 0.00 3.86
470 471 3.505293 GCAACTCCTTTCTTCATCTGCTT 59.495 43.478 0.00 0.00 0.00 3.91
471 472 3.080319 GCAACTCCTTTCTTCATCTGCT 58.920 45.455 0.00 0.00 0.00 4.24
472 473 2.816087 TGCAACTCCTTTCTTCATCTGC 59.184 45.455 0.00 0.00 0.00 4.26
473 474 3.120408 CGTGCAACTCCTTTCTTCATCTG 60.120 47.826 0.00 0.00 31.75 2.90
474 475 3.070018 CGTGCAACTCCTTTCTTCATCT 58.930 45.455 0.00 0.00 31.75 2.90
475 476 2.808543 ACGTGCAACTCCTTTCTTCATC 59.191 45.455 0.00 0.00 31.75 2.92
476 477 2.549754 CACGTGCAACTCCTTTCTTCAT 59.450 45.455 0.82 0.00 31.75 2.57
477 478 1.939934 CACGTGCAACTCCTTTCTTCA 59.060 47.619 0.82 0.00 31.75 3.02
478 479 1.940613 ACACGTGCAACTCCTTTCTTC 59.059 47.619 17.22 0.00 31.75 2.87
479 480 2.038387 ACACGTGCAACTCCTTTCTT 57.962 45.000 17.22 0.00 31.75 2.52
480 481 2.902705 TACACGTGCAACTCCTTTCT 57.097 45.000 17.22 0.00 31.75 2.52
481 482 2.412847 GCATACACGTGCAACTCCTTTC 60.413 50.000 17.22 0.00 44.43 2.62
482 483 1.535462 GCATACACGTGCAACTCCTTT 59.465 47.619 17.22 0.00 44.43 3.11
483 484 1.156736 GCATACACGTGCAACTCCTT 58.843 50.000 17.22 0.00 44.43 3.36
484 485 2.840974 GCATACACGTGCAACTCCT 58.159 52.632 17.22 0.00 44.43 3.69
502 503 5.171874 GTGTACGTATGAATTGCATTGCATG 59.828 40.000 12.95 0.00 38.76 4.06
503 504 5.163673 TGTGTACGTATGAATTGCATTGCAT 60.164 36.000 12.95 7.23 38.76 3.96
504 505 4.154918 TGTGTACGTATGAATTGCATTGCA 59.845 37.500 7.38 7.38 38.44 4.08
505 506 4.657055 TGTGTACGTATGAATTGCATTGC 58.343 39.130 0.46 0.46 38.44 3.56
506 507 6.195060 CACATGTGTACGTATGAATTGCATTG 59.805 38.462 18.03 0.00 38.44 2.82
507 508 6.257423 CACATGTGTACGTATGAATTGCATT 58.743 36.000 18.03 0.00 38.44 3.56
508 509 5.730289 GCACATGTGTACGTATGAATTGCAT 60.730 40.000 26.01 0.00 41.08 3.96
509 510 4.436718 GCACATGTGTACGTATGAATTGCA 60.437 41.667 26.01 0.00 0.00 4.08
510 511 4.028383 GCACATGTGTACGTATGAATTGC 58.972 43.478 26.01 3.61 0.00 3.56
511 512 4.332543 AGGCACATGTGTACGTATGAATTG 59.667 41.667 26.01 0.00 0.00 2.32
512 513 4.513442 AGGCACATGTGTACGTATGAATT 58.487 39.130 26.01 0.22 0.00 2.17
513 514 4.137116 AGGCACATGTGTACGTATGAAT 57.863 40.909 26.01 0.88 0.00 2.57
514 515 3.603158 AGGCACATGTGTACGTATGAA 57.397 42.857 26.01 0.00 0.00 2.57
515 516 3.056465 TCAAGGCACATGTGTACGTATGA 60.056 43.478 26.01 20.00 0.00 2.15
516 517 3.258228 TCAAGGCACATGTGTACGTATG 58.742 45.455 26.01 18.49 0.00 2.39
517 518 3.603158 TCAAGGCACATGTGTACGTAT 57.397 42.857 26.01 9.50 0.00 3.06
518 519 3.322369 CTTCAAGGCACATGTGTACGTA 58.678 45.455 26.01 7.84 0.00 3.57
519 520 2.143122 CTTCAAGGCACATGTGTACGT 58.857 47.619 26.01 15.00 0.00 3.57
520 521 1.135972 GCTTCAAGGCACATGTGTACG 60.136 52.381 26.01 12.89 0.00 3.67
521 522 1.135972 CGCTTCAAGGCACATGTGTAC 60.136 52.381 26.01 18.90 0.00 2.90
522 523 1.155889 CGCTTCAAGGCACATGTGTA 58.844 50.000 26.01 5.43 0.00 2.90
523 524 0.819259 ACGCTTCAAGGCACATGTGT 60.819 50.000 26.01 5.37 0.00 3.72
524 525 0.311790 AACGCTTCAAGGCACATGTG 59.688 50.000 21.83 21.83 0.00 3.21
525 526 1.032014 AAACGCTTCAAGGCACATGT 58.968 45.000 0.00 0.00 0.00 3.21
526 527 1.269206 ACAAACGCTTCAAGGCACATG 60.269 47.619 0.00 0.00 0.00 3.21
527 528 1.032014 ACAAACGCTTCAAGGCACAT 58.968 45.000 0.00 0.00 0.00 3.21
528 529 1.669604 TACAAACGCTTCAAGGCACA 58.330 45.000 0.00 0.00 0.00 4.57
529 530 2.989422 ATACAAACGCTTCAAGGCAC 57.011 45.000 0.00 0.00 0.00 5.01
530 531 3.670625 AGTATACAAACGCTTCAAGGCA 58.329 40.909 5.50 0.00 0.00 4.75
531 532 4.868734 AGTAGTATACAAACGCTTCAAGGC 59.131 41.667 5.50 0.00 46.26 4.35
532 533 5.291128 CCAGTAGTATACAAACGCTTCAAGG 59.709 44.000 5.50 0.00 46.26 3.61
533 534 5.867716 ACCAGTAGTATACAAACGCTTCAAG 59.132 40.000 5.50 0.00 46.26 3.02
534 535 5.636121 CACCAGTAGTATACAAACGCTTCAA 59.364 40.000 5.50 0.00 46.26 2.69
535 536 5.165676 CACCAGTAGTATACAAACGCTTCA 58.834 41.667 5.50 0.00 46.26 3.02
536 537 4.032558 GCACCAGTAGTATACAAACGCTTC 59.967 45.833 5.50 0.00 46.26 3.86
537 538 3.930848 GCACCAGTAGTATACAAACGCTT 59.069 43.478 5.50 0.00 46.26 4.68
538 539 3.194968 AGCACCAGTAGTATACAAACGCT 59.805 43.478 5.50 4.56 46.26 5.07
539 540 3.518590 AGCACCAGTAGTATACAAACGC 58.481 45.455 5.50 2.49 46.26 4.84
540 541 7.201145 AGATAAGCACCAGTAGTATACAAACG 58.799 38.462 5.50 0.67 46.26 3.60
545 546 9.694137 CCTTTTAGATAAGCACCAGTAGTATAC 57.306 37.037 0.00 0.00 43.47 1.47
546 547 8.867097 CCCTTTTAGATAAGCACCAGTAGTATA 58.133 37.037 0.00 0.00 0.00 1.47
547 548 7.347485 ACCCTTTTAGATAAGCACCAGTAGTAT 59.653 37.037 0.00 0.00 0.00 2.12
548 549 6.670902 ACCCTTTTAGATAAGCACCAGTAGTA 59.329 38.462 0.00 0.00 0.00 1.82
549 550 5.487845 ACCCTTTTAGATAAGCACCAGTAGT 59.512 40.000 0.00 0.00 0.00 2.73
550 551 5.990668 ACCCTTTTAGATAAGCACCAGTAG 58.009 41.667 0.00 0.00 0.00 2.57
551 552 6.382919 AACCCTTTTAGATAAGCACCAGTA 57.617 37.500 0.00 0.00 0.00 2.74
552 553 4.929146 ACCCTTTTAGATAAGCACCAGT 57.071 40.909 0.00 0.00 0.00 4.00
553 554 7.881775 ATTAACCCTTTTAGATAAGCACCAG 57.118 36.000 0.00 0.00 0.00 4.00
554 555 9.930158 ATAATTAACCCTTTTAGATAAGCACCA 57.070 29.630 0.00 0.00 0.00 4.17
702 703 0.250770 AAGGGCCGAGTCAAAAGGTC 60.251 55.000 0.00 0.00 0.00 3.85
937 938 4.451150 TGCTAGCTTCCCACCGCG 62.451 66.667 17.23 0.00 0.00 6.46
1045 1046 4.314440 AGGCATGTCCACACGCGT 62.314 61.111 5.58 5.58 35.67 6.01
1637 1638 6.877611 TTAAATGTTGGTCACTTCTTCTCC 57.122 37.500 0.00 0.00 0.00 3.71
1753 1756 2.235402 CTGAATTTGGCCCAAGAGCAAT 59.765 45.455 0.00 0.00 0.00 3.56


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.