Multiple sequence alignment - TraesCS3A01G496500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G496500 chr3A 100.000 2603 0 0 1 2603 722305899 722308501 0.000000e+00 4807.0
1 TraesCS3A01G496500 chr3A 84.724 779 93 15 981 1747 722284699 722285463 0.000000e+00 756.0
2 TraesCS3A01G496500 chr3A 85.714 77 10 1 1765 1841 40850577 40850652 2.150000e-11 80.5
3 TraesCS3A01G496500 chr3B 88.815 751 59 7 967 1701 792962857 792963598 0.000000e+00 898.0
4 TraesCS3A01G496500 chr3B 82.960 804 96 19 981 1768 792871249 792872027 0.000000e+00 688.0
5 TraesCS3A01G496500 chr3B 88.837 430 44 3 113 540 400330000 400330427 2.290000e-145 525.0
6 TraesCS3A01G496500 chr3B 84.152 448 47 8 976 1406 792970739 792971179 1.860000e-111 412.0
7 TraesCS3A01G496500 chr3B 87.500 288 32 2 697 984 731125698 731125981 1.930000e-86 329.0
8 TraesCS3A01G496500 chr3B 91.275 149 11 2 538 685 792962701 792962848 4.390000e-48 202.0
9 TraesCS3A01G496500 chr3B 85.437 103 10 5 2074 2173 737558976 737558876 4.580000e-18 102.0
10 TraesCS3A01G496500 chr3D 93.870 571 22 7 972 1535 591723640 591723076 0.000000e+00 848.0
11 TraesCS3A01G496500 chr3D 85.088 798 96 14 981 1771 591816946 591816165 0.000000e+00 793.0
12 TraesCS3A01G496500 chr3D 92.308 533 24 5 1537 2064 591722991 591722471 0.000000e+00 741.0
13 TraesCS3A01G496500 chr3D 90.423 355 22 8 2254 2603 591722484 591722137 8.490000e-125 457.0
14 TraesCS3A01G496500 chr3D 87.986 283 30 2 699 981 199216706 199216428 5.370000e-87 331.0
15 TraesCS3A01G496500 chr3D 83.654 104 14 3 2075 2178 26193841 26193941 7.670000e-16 95.3
16 TraesCS3A01G496500 chr3D 82.883 111 11 6 2076 2180 615458683 615458791 2.760000e-15 93.5
17 TraesCS3A01G496500 chr3D 87.692 65 8 0 2076 2140 554781249 554781313 2.780000e-10 76.8
18 TraesCS3A01G496500 chr3D 88.333 60 7 0 1780 1839 134958185 134958244 3.590000e-09 73.1
19 TraesCS3A01G496500 chr7A 91.686 421 32 3 113 531 549450437 549450856 4.830000e-162 580.0
20 TraesCS3A01G496500 chr7A 89.362 423 42 3 113 533 598528632 598529053 1.770000e-146 529.0
21 TraesCS3A01G496500 chrUn 90.802 424 37 2 113 535 323406959 323406537 1.350000e-157 566.0
22 TraesCS3A01G496500 chrUn 95.726 117 5 0 1 117 83142292 83142176 3.420000e-44 189.0
23 TraesCS3A01G496500 chrUn 95.726 117 5 0 1 117 297407618 297407734 3.420000e-44 189.0
24 TraesCS3A01G496500 chrUn 92.982 57 4 0 2085 2141 352064540 352064596 1.660000e-12 84.2
25 TraesCS3A01G496500 chrUn 92.982 57 4 0 2085 2141 467073909 467073853 1.660000e-12 84.2
26 TraesCS3A01G496500 chrUn 100.000 33 0 0 1789 1821 108733956 108733924 7.780000e-06 62.1
27 TraesCS3A01G496500 chrUn 90.698 43 2 2 1785 1825 93268506 93268548 3.620000e-04 56.5
28 TraesCS3A01G496500 chrUn 90.698 43 2 2 1785 1825 322602013 322602055 3.620000e-04 56.5
29 TraesCS3A01G496500 chr2B 90.974 421 36 2 113 532 147826786 147827205 1.350000e-157 566.0
30 TraesCS3A01G496500 chr2B 90.974 421 36 2 113 532 147862662 147863081 1.350000e-157 566.0
31 TraesCS3A01G496500 chr2B 90.974 421 36 2 113 532 147866408 147866827 1.350000e-157 566.0
32 TraesCS3A01G496500 chr2B 90.141 71 7 0 2075 2145 773427867 773427937 2.760000e-15 93.5
33 TraesCS3A01G496500 chr2A 89.598 423 40 3 113 532 17028511 17028932 3.810000e-148 534.0
34 TraesCS3A01G496500 chr4A 89.713 418 42 1 116 532 703481101 703480684 1.370000e-147 532.0
35 TraesCS3A01G496500 chr4A 96.460 113 4 0 3 115 191592830 191592942 1.230000e-43 187.0
36 TraesCS3A01G496500 chr4A 92.727 55 4 0 1780 1834 161260604 161260658 2.150000e-11 80.5
37 TraesCS3A01G496500 chr7D 89.493 276 25 2 702 977 273364290 273364561 1.920000e-91 346.0
38 TraesCS3A01G496500 chr7D 90.000 60 6 0 1780 1839 66408562 66408503 7.720000e-11 78.7
39 TraesCS3A01G496500 chr7D 89.831 59 4 2 2088 2145 618312591 618312534 9.990000e-10 75.0
40 TraesCS3A01G496500 chr7D 82.051 78 13 1 1764 1841 11490713 11490789 6.010000e-07 65.8
41 TraesCS3A01G496500 chr4B 88.889 279 27 2 701 979 428180456 428180182 8.920000e-90 340.0
42 TraesCS3A01G496500 chr4B 86.139 101 8 6 2075 2171 601418489 601418391 1.270000e-18 104.0
43 TraesCS3A01G496500 chr4B 83.333 78 10 3 1757 1833 466057673 466057598 4.650000e-08 69.4
44 TraesCS3A01G496500 chr4B 95.238 42 2 0 1781 1822 104813098 104813057 1.670000e-07 67.6
45 TraesCS3A01G496500 chr7B 88.693 283 25 6 699 981 60507061 60507336 3.210000e-89 339.0
46 TraesCS3A01G496500 chr7B 94.366 71 3 1 2075 2145 201461136 201461067 9.850000e-20 108.0
47 TraesCS3A01G496500 chr1B 88.768 276 25 4 707 982 452309779 452309510 1.490000e-87 333.0
48 TraesCS3A01G496500 chr1A 88.809 277 24 5 701 976 249035273 249035003 1.490000e-87 333.0
49 TraesCS3A01G496500 chr1A 95.000 120 4 2 1 120 533317071 533317188 1.230000e-43 187.0
50 TraesCS3A01G496500 chr1A 95.652 115 5 0 1 115 449513606 449513492 4.420000e-43 185.0
51 TraesCS3A01G496500 chr1A 92.958 71 4 1 2075 2145 22061476 22061545 4.580000e-18 102.0
52 TraesCS3A01G496500 chr1A 95.833 48 2 0 1785 1832 509847964 509847917 7.720000e-11 78.7
53 TraesCS3A01G496500 chr1A 90.909 55 5 0 1767 1821 585655807 585655861 9.990000e-10 75.0
54 TraesCS3A01G496500 chr6B 87.943 282 30 2 698 979 704954824 704955101 1.930000e-86 329.0
55 TraesCS3A01G496500 chr4D 83.889 360 41 13 2256 2603 282787684 282788038 6.950000e-86 327.0
56 TraesCS3A01G496500 chr4D 87.241 290 32 3 697 986 436724884 436725168 2.500000e-85 326.0
57 TraesCS3A01G496500 chr4D 91.860 86 4 3 2256 2338 282780246 282780331 1.640000e-22 117.0
58 TraesCS3A01G496500 chr4D 89.231 65 7 0 1780 1844 138260173 138260109 5.970000e-12 82.4
59 TraesCS3A01G496500 chr4D 89.474 57 6 0 1765 1821 501535849 501535793 3.590000e-09 73.1
60 TraesCS3A01G496500 chr4D 97.561 41 1 0 1781 1821 84999545 84999505 1.290000e-08 71.3
61 TraesCS3A01G496500 chr4D 89.091 55 6 0 1785 1839 435849950 435850004 4.650000e-08 69.4
62 TraesCS3A01G496500 chr6A 95.082 122 4 2 1 122 602741477 602741358 9.510000e-45 191.0
63 TraesCS3A01G496500 chr6A 96.491 114 4 0 1 114 562702216 562702329 3.420000e-44 189.0
64 TraesCS3A01G496500 chr5A 96.522 115 4 0 1 115 422060501 422060387 9.510000e-45 191.0
65 TraesCS3A01G496500 chr5A 95.000 120 5 1 1 119 461619697 461619816 1.230000e-43 187.0
66 TraesCS3A01G496500 chr5A 91.549 71 5 1 2076 2145 577925198 577925128 2.130000e-16 97.1
67 TraesCS3A01G496500 chr5A 89.706 68 5 2 1768 1834 600058995 600058929 4.620000e-13 86.1
68 TraesCS3A01G496500 chr5A 91.379 58 4 1 1765 1821 513233433 513233376 7.720000e-11 78.7
69 TraesCS3A01G496500 chr5B 91.429 70 6 0 2076 2145 559401542 559401473 2.130000e-16 97.1
70 TraesCS3A01G496500 chr5B 88.710 62 7 0 1780 1841 11764673 11764734 2.780000e-10 76.8
71 TraesCS3A01G496500 chr2D 88.571 70 8 0 2076 2145 646301665 646301596 4.620000e-13 86.1
72 TraesCS3A01G496500 chr2D 91.071 56 5 0 1789 1844 534410642 534410587 2.780000e-10 76.8
73 TraesCS3A01G496500 chr2D 86.154 65 9 0 1780 1844 547877189 547877125 1.290000e-08 71.3
74 TraesCS3A01G496500 chr2D 79.570 93 15 4 1780 1872 100327033 100327121 2.160000e-06 63.9
75 TraesCS3A01G496500 chr5D 89.552 67 5 2 2088 2153 461869054 461868989 1.660000e-12 84.2
76 TraesCS3A01G496500 chr6D 95.556 45 2 0 1780 1824 351121611 351121655 3.590000e-09 73.1
77 TraesCS3A01G496500 chr1D 90.909 55 4 1 1780 1834 491086904 491086957 3.590000e-09 73.1
78 TraesCS3A01G496500 chr1D 95.238 42 2 0 1780 1821 223174647 223174606 1.670000e-07 67.6
79 TraesCS3A01G496500 chr1D 95.000 40 2 0 1782 1821 320584969 320585008 2.160000e-06 63.9
80 TraesCS3A01G496500 chr1D 84.375 64 10 0 2076 2139 459829935 459829998 2.160000e-06 63.9
81 TraesCS3A01G496500 chr1D 83.582 67 10 1 2074 2139 11045877 11045943 7.780000e-06 62.1
82 TraesCS3A01G496500 chr1D 81.250 80 12 3 1780 1859 262255145 262255221 7.780000e-06 62.1
83 TraesCS3A01G496500 chr1D 92.857 42 3 0 1780 1821 439222382 439222423 7.780000e-06 62.1
84 TraesCS3A01G496500 chr1D 100.000 31 0 0 1793 1823 238791157 238791127 1.010000e-04 58.4
85 TraesCS3A01G496500 chr1D 92.500 40 1 2 1793 1830 39349114 39349153 3.620000e-04 56.5
86 TraesCS3A01G496500 chr1D 92.105 38 1 2 1785 1820 21183407 21183444 5.000000e-03 52.8
87 TraesCS3A01G496500 chr1D 92.105 38 1 2 1785 1820 44122547 44122584 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G496500 chr3A 722305899 722308501 2602 False 4807 4807 100.000000 1 2603 1 chr3A.!!$F3 2602
1 TraesCS3A01G496500 chr3A 722284699 722285463 764 False 756 756 84.724000 981 1747 1 chr3A.!!$F2 766
2 TraesCS3A01G496500 chr3B 792871249 792872027 778 False 688 688 82.960000 981 1768 1 chr3B.!!$F3 787
3 TraesCS3A01G496500 chr3B 792962701 792963598 897 False 550 898 90.045000 538 1701 2 chr3B.!!$F5 1163
4 TraesCS3A01G496500 chr3D 591816165 591816946 781 True 793 793 85.088000 981 1771 1 chr3D.!!$R2 790
5 TraesCS3A01G496500 chr3D 591722137 591723640 1503 True 682 848 92.200333 972 2603 3 chr3D.!!$R3 1631
6 TraesCS3A01G496500 chr2B 147862662 147866827 4165 False 566 566 90.974000 113 532 2 chr2B.!!$F3 419

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
700 1024 0.108804 GCGCCTATAGCTCGCCATTA 60.109 55.0 20.2 0.0 42.71 1.9 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2144 5507 0.033504 CTCGTTGTATGGGCGGCTAT 59.966 55.0 13.43 13.43 0.0 2.97 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 2.686106 GGGACCAACTCGCCCCTA 60.686 66.667 0.00 0.00 35.76 3.53
34 35 2.732619 GGGACCAACTCGCCCCTAG 61.733 68.421 0.00 0.00 35.76 3.02
35 36 2.732619 GGACCAACTCGCCCCTAGG 61.733 68.421 0.06 0.06 0.00 3.02
47 48 0.541392 CCCCTAGGCCCAATTTTTGC 59.459 55.000 2.05 0.00 0.00 3.68
48 49 0.175531 CCCTAGGCCCAATTTTTGCG 59.824 55.000 2.05 0.00 0.00 4.85
49 50 0.460109 CCTAGGCCCAATTTTTGCGC 60.460 55.000 0.00 0.00 33.80 6.09
51 52 3.117812 GGCCCAATTTTTGCGCCG 61.118 61.111 4.18 0.00 43.89 6.46
52 53 3.117812 GCCCAATTTTTGCGCCGG 61.118 61.111 4.18 0.00 0.00 6.13
53 54 3.117812 CCCAATTTTTGCGCCGGC 61.118 61.111 19.07 19.07 40.52 6.13
54 55 2.048316 CCAATTTTTGCGCCGGCT 60.048 55.556 26.68 0.00 40.82 5.52
55 56 2.094066 CCAATTTTTGCGCCGGCTC 61.094 57.895 26.68 18.89 40.82 4.70
56 57 1.372748 CAATTTTTGCGCCGGCTCA 60.373 52.632 26.68 21.91 40.82 4.26
57 58 1.372872 AATTTTTGCGCCGGCTCAC 60.373 52.632 26.68 14.53 40.82 3.51
58 59 2.763627 AATTTTTGCGCCGGCTCACC 62.764 55.000 26.68 10.54 40.82 4.02
75 76 2.124487 CCCCAGGCGGCGATTTTA 60.124 61.111 12.98 0.00 0.00 1.52
76 77 2.186826 CCCCAGGCGGCGATTTTAG 61.187 63.158 12.98 0.00 0.00 1.85
77 78 2.186826 CCCAGGCGGCGATTTTAGG 61.187 63.158 12.98 2.42 0.00 2.69
78 79 2.715624 CAGGCGGCGATTTTAGGC 59.284 61.111 12.98 0.00 0.00 3.93
84 85 3.023118 GCGATTTTAGGCGCCTCC 58.977 61.111 36.73 16.70 46.93 4.30
85 86 1.523938 GCGATTTTAGGCGCCTCCT 60.524 57.895 36.73 16.34 46.93 3.69
86 87 1.776034 GCGATTTTAGGCGCCTCCTG 61.776 60.000 36.73 18.67 46.98 3.86
87 88 1.160329 CGATTTTAGGCGCCTCCTGG 61.160 60.000 36.73 14.96 46.98 4.45
88 89 0.819666 GATTTTAGGCGCCTCCTGGG 60.820 60.000 36.73 0.00 46.98 4.45
89 90 2.284515 ATTTTAGGCGCCTCCTGGGG 62.285 60.000 36.73 0.00 46.98 4.96
110 111 3.590824 CAACGGTTGGAGATGCCC 58.409 61.111 13.03 0.00 34.97 5.36
111 112 1.002134 CAACGGTTGGAGATGCCCT 60.002 57.895 13.03 0.00 34.97 5.19
117 118 1.475930 GGTTGGAGATGCCCTTAGCTC 60.476 57.143 0.00 0.00 44.23 4.09
126 127 4.600983 AGATGCCCTTAGCTCTCCAATATT 59.399 41.667 0.00 0.00 44.23 1.28
134 135 7.040823 CCCTTAGCTCTCCAATATTGCTTTAAG 60.041 40.741 10.11 10.24 35.47 1.85
139 140 6.488006 GCTCTCCAATATTGCTTTAAGATCCA 59.512 38.462 10.11 0.00 0.00 3.41
154 155 3.262420 AGATCCATGCGACACAACTAAC 58.738 45.455 0.00 0.00 0.00 2.34
165 166 6.533723 TGCGACACAACTAACTTTCTATATGG 59.466 38.462 0.00 0.00 0.00 2.74
206 207 8.988060 TGTTTCTCCCACATAGAACATATCTTA 58.012 33.333 0.00 0.00 39.71 2.10
225 226 6.254281 TCTTAAAGTTCAAACCTATGCAGC 57.746 37.500 0.00 0.00 0.00 5.25
226 227 3.559238 AAAGTTCAAACCTATGCAGCG 57.441 42.857 0.00 0.00 0.00 5.18
398 399 3.988379 TTAGAAAGCTTTGCCACACTG 57.012 42.857 18.30 0.00 0.00 3.66
417 418 7.310664 CACACTGCATAGATTTGAACTTCAAT 58.689 34.615 5.03 0.00 36.11 2.57
467 469 9.649024 AAAAAGAAAATGTATTTGCACGAATTG 57.351 25.926 0.00 0.00 0.00 2.32
501 503 3.941629 TGGATGGCTAGATAAAGAGGGT 58.058 45.455 0.00 0.00 0.00 4.34
506 508 3.052109 TGGCTAGATAAAGAGGGTCTGGA 60.052 47.826 0.00 0.00 0.00 3.86
508 510 5.162870 TGGCTAGATAAAGAGGGTCTGGATA 60.163 44.000 0.00 0.00 0.00 2.59
536 538 8.771920 TGTGCTCTAATATATATTTTCCCACG 57.228 34.615 13.09 0.00 0.00 4.94
621 945 4.647399 TCGTTTTGGGTTGAAAGAAGGAAT 59.353 37.500 0.00 0.00 0.00 3.01
622 946 4.982295 CGTTTTGGGTTGAAAGAAGGAATC 59.018 41.667 0.00 0.00 0.00 2.52
651 975 1.067565 TCTGTTGCCAGATCAGACGTC 60.068 52.381 7.70 7.70 42.80 4.34
698 1022 2.262915 GCGCCTATAGCTCGCCAT 59.737 61.111 20.20 0.00 42.71 4.40
699 1023 1.374758 GCGCCTATAGCTCGCCATT 60.375 57.895 20.20 0.00 42.71 3.16
700 1024 0.108804 GCGCCTATAGCTCGCCATTA 60.109 55.000 20.20 0.00 42.71 1.90
701 1025 1.914634 CGCCTATAGCTCGCCATTAG 58.085 55.000 0.00 0.00 40.39 1.73
716 1040 4.543590 CCATTAGGCTAGTCATAGTGGG 57.456 50.000 0.00 0.00 35.84 4.61
717 1041 4.160329 CCATTAGGCTAGTCATAGTGGGA 58.840 47.826 0.00 0.00 35.84 4.37
718 1042 4.221703 CCATTAGGCTAGTCATAGTGGGAG 59.778 50.000 0.00 0.00 35.84 4.30
719 1043 4.537945 TTAGGCTAGTCATAGTGGGAGT 57.462 45.455 0.00 0.00 0.00 3.85
720 1044 5.658198 TTAGGCTAGTCATAGTGGGAGTA 57.342 43.478 0.00 0.00 0.00 2.59
721 1045 4.537945 AGGCTAGTCATAGTGGGAGTAA 57.462 45.455 0.00 0.00 0.00 2.24
722 1046 4.216708 AGGCTAGTCATAGTGGGAGTAAC 58.783 47.826 0.00 0.00 0.00 2.50
723 1047 3.958798 GGCTAGTCATAGTGGGAGTAACA 59.041 47.826 0.00 0.00 0.00 2.41
724 1048 4.589374 GGCTAGTCATAGTGGGAGTAACAT 59.411 45.833 0.00 0.00 0.00 2.71
725 1049 5.773680 GGCTAGTCATAGTGGGAGTAACATA 59.226 44.000 0.00 0.00 0.00 2.29
726 1050 6.071840 GGCTAGTCATAGTGGGAGTAACATAG 60.072 46.154 0.00 0.00 0.00 2.23
727 1051 6.490721 GCTAGTCATAGTGGGAGTAACATAGT 59.509 42.308 0.00 0.00 0.00 2.12
728 1052 7.664731 GCTAGTCATAGTGGGAGTAACATAGTA 59.335 40.741 0.00 0.00 0.00 1.82
729 1053 9.570468 CTAGTCATAGTGGGAGTAACATAGTAA 57.430 37.037 0.00 0.00 0.00 2.24
730 1054 8.466617 AGTCATAGTGGGAGTAACATAGTAAG 57.533 38.462 0.00 0.00 0.00 2.34
731 1055 8.060075 AGTCATAGTGGGAGTAACATAGTAAGT 58.940 37.037 0.00 0.00 0.00 2.24
732 1056 9.347240 GTCATAGTGGGAGTAACATAGTAAGTA 57.653 37.037 0.00 0.00 0.00 2.24
733 1057 9.925545 TCATAGTGGGAGTAACATAGTAAGTAA 57.074 33.333 0.00 0.00 0.00 2.24
786 1110 9.685276 TTATATGGCATGTATTTAATGAGGAGG 57.315 33.333 10.98 0.00 0.00 4.30
787 1111 4.728772 TGGCATGTATTTAATGAGGAGGG 58.271 43.478 0.00 0.00 0.00 4.30
788 1112 4.415179 TGGCATGTATTTAATGAGGAGGGA 59.585 41.667 0.00 0.00 0.00 4.20
789 1113 5.006386 GGCATGTATTTAATGAGGAGGGAG 58.994 45.833 0.00 0.00 0.00 4.30
790 1114 5.221925 GGCATGTATTTAATGAGGAGGGAGA 60.222 44.000 0.00 0.00 0.00 3.71
791 1115 5.936956 GCATGTATTTAATGAGGAGGGAGAG 59.063 44.000 0.00 0.00 0.00 3.20
792 1116 6.239714 GCATGTATTTAATGAGGAGGGAGAGA 60.240 42.308 0.00 0.00 0.00 3.10
793 1117 7.528543 GCATGTATTTAATGAGGAGGGAGAGAT 60.529 40.741 0.00 0.00 0.00 2.75
794 1118 7.308450 TGTATTTAATGAGGAGGGAGAGATG 57.692 40.000 0.00 0.00 0.00 2.90
795 1119 6.846505 TGTATTTAATGAGGAGGGAGAGATGT 59.153 38.462 0.00 0.00 0.00 3.06
796 1120 6.838401 ATTTAATGAGGAGGGAGAGATGTT 57.162 37.500 0.00 0.00 0.00 2.71
797 1121 6.642733 TTTAATGAGGAGGGAGAGATGTTT 57.357 37.500 0.00 0.00 0.00 2.83
798 1122 4.500499 AATGAGGAGGGAGAGATGTTTG 57.500 45.455 0.00 0.00 0.00 2.93
799 1123 2.191400 TGAGGAGGGAGAGATGTTTGG 58.809 52.381 0.00 0.00 0.00 3.28
800 1124 2.225624 TGAGGAGGGAGAGATGTTTGGA 60.226 50.000 0.00 0.00 0.00 3.53
801 1125 2.433970 GAGGAGGGAGAGATGTTTGGAG 59.566 54.545 0.00 0.00 0.00 3.86
802 1126 2.192263 GGAGGGAGAGATGTTTGGAGT 58.808 52.381 0.00 0.00 0.00 3.85
803 1127 3.012959 AGGAGGGAGAGATGTTTGGAGTA 59.987 47.826 0.00 0.00 0.00 2.59
804 1128 3.775316 GGAGGGAGAGATGTTTGGAGTAA 59.225 47.826 0.00 0.00 0.00 2.24
805 1129 4.383226 GGAGGGAGAGATGTTTGGAGTAAC 60.383 50.000 0.00 0.00 0.00 2.50
806 1130 4.168101 AGGGAGAGATGTTTGGAGTAACA 58.832 43.478 0.00 0.00 41.81 2.41
808 1132 5.964477 AGGGAGAGATGTTTGGAGTAACATA 59.036 40.000 2.29 0.00 45.98 2.29
809 1133 6.443849 AGGGAGAGATGTTTGGAGTAACATAA 59.556 38.462 2.29 0.00 45.98 1.90
810 1134 7.127955 AGGGAGAGATGTTTGGAGTAACATAAT 59.872 37.037 2.29 0.00 45.98 1.28
811 1135 8.429641 GGGAGAGATGTTTGGAGTAACATAATA 58.570 37.037 2.29 0.00 45.98 0.98
830 1154 8.740906 ACATAATATGTTACTCTAGCATAGCGT 58.259 33.333 0.00 0.00 41.63 5.07
834 1158 5.624344 TGTTACTCTAGCATAGCGTATCC 57.376 43.478 0.00 0.00 38.52 2.59
835 1159 5.314529 TGTTACTCTAGCATAGCGTATCCT 58.685 41.667 0.00 0.00 38.52 3.24
836 1160 6.470278 TGTTACTCTAGCATAGCGTATCCTA 58.530 40.000 0.00 0.00 38.52 2.94
837 1161 6.938596 TGTTACTCTAGCATAGCGTATCCTAA 59.061 38.462 0.00 0.00 38.52 2.69
838 1162 7.119407 TGTTACTCTAGCATAGCGTATCCTAAG 59.881 40.741 0.00 0.00 38.52 2.18
839 1163 4.944930 ACTCTAGCATAGCGTATCCTAAGG 59.055 45.833 0.00 0.00 34.34 2.69
840 1164 3.695060 TCTAGCATAGCGTATCCTAAGGC 59.305 47.826 0.00 0.00 38.99 4.35
841 1165 2.248248 AGCATAGCGTATCCTAAGGCA 58.752 47.619 0.00 0.00 32.74 4.75
842 1166 2.632996 AGCATAGCGTATCCTAAGGCAA 59.367 45.455 0.00 0.00 32.74 4.52
843 1167 3.071023 AGCATAGCGTATCCTAAGGCAAA 59.929 43.478 0.00 0.00 32.74 3.68
844 1168 3.813166 GCATAGCGTATCCTAAGGCAAAA 59.187 43.478 0.00 0.00 32.74 2.44
845 1169 4.455877 GCATAGCGTATCCTAAGGCAAAAT 59.544 41.667 0.00 0.00 32.74 1.82
846 1170 5.617751 GCATAGCGTATCCTAAGGCAAAATG 60.618 44.000 0.00 0.00 32.74 2.32
847 1171 4.150897 AGCGTATCCTAAGGCAAAATGA 57.849 40.909 0.00 0.00 32.74 2.57
848 1172 4.130118 AGCGTATCCTAAGGCAAAATGAG 58.870 43.478 0.00 0.00 32.74 2.90
849 1173 3.877508 GCGTATCCTAAGGCAAAATGAGT 59.122 43.478 0.00 0.00 0.00 3.41
850 1174 4.024809 GCGTATCCTAAGGCAAAATGAGTC 60.025 45.833 0.00 0.00 0.00 3.36
851 1175 5.360591 CGTATCCTAAGGCAAAATGAGTCT 58.639 41.667 0.00 0.00 0.00 3.24
852 1176 6.513180 CGTATCCTAAGGCAAAATGAGTCTA 58.487 40.000 0.00 0.00 0.00 2.59
853 1177 6.421202 CGTATCCTAAGGCAAAATGAGTCTAC 59.579 42.308 0.00 0.00 0.00 2.59
854 1178 5.755409 TCCTAAGGCAAAATGAGTCTACA 57.245 39.130 0.00 0.00 0.00 2.74
855 1179 6.313519 TCCTAAGGCAAAATGAGTCTACAT 57.686 37.500 0.00 0.00 0.00 2.29
856 1180 6.349300 TCCTAAGGCAAAATGAGTCTACATC 58.651 40.000 0.00 0.00 0.00 3.06
857 1181 6.156949 TCCTAAGGCAAAATGAGTCTACATCT 59.843 38.462 0.00 0.00 0.00 2.90
858 1182 6.481644 CCTAAGGCAAAATGAGTCTACATCTC 59.518 42.308 0.00 0.00 0.00 2.75
859 1183 5.690464 AGGCAAAATGAGTCTACATCTCT 57.310 39.130 0.00 0.00 33.59 3.10
860 1184 6.059787 AGGCAAAATGAGTCTACATCTCTT 57.940 37.500 0.00 0.00 33.59 2.85
861 1185 7.187824 AGGCAAAATGAGTCTACATCTCTTA 57.812 36.000 0.00 0.00 33.59 2.10
862 1186 7.624549 AGGCAAAATGAGTCTACATCTCTTAA 58.375 34.615 0.00 0.00 33.59 1.85
863 1187 8.270744 AGGCAAAATGAGTCTACATCTCTTAAT 58.729 33.333 0.00 0.00 33.59 1.40
864 1188 9.547753 GGCAAAATGAGTCTACATCTCTTAATA 57.452 33.333 0.00 0.00 33.59 0.98
902 1226 9.944376 ACATGATACTACACATATGTTATTCCC 57.056 33.333 5.37 0.00 40.48 3.97
903 1227 9.383519 CATGATACTACACATATGTTATTCCCC 57.616 37.037 5.37 0.00 40.48 4.81
904 1228 8.499288 TGATACTACACATATGTTATTCCCCA 57.501 34.615 5.37 0.00 40.48 4.96
905 1229 8.372459 TGATACTACACATATGTTATTCCCCAC 58.628 37.037 5.37 0.00 40.48 4.61
906 1230 6.824958 ACTACACATATGTTATTCCCCACT 57.175 37.500 5.37 0.00 40.48 4.00
907 1231 7.924358 ACTACACATATGTTATTCCCCACTA 57.076 36.000 5.37 0.00 40.48 2.74
908 1232 8.506196 ACTACACATATGTTATTCCCCACTAT 57.494 34.615 5.37 0.00 40.48 2.12
909 1233 9.610104 ACTACACATATGTTATTCCCCACTATA 57.390 33.333 5.37 0.00 40.48 1.31
912 1236 9.793259 ACACATATGTTATTCCCCACTATAAAG 57.207 33.333 5.37 0.00 34.46 1.85
917 1241 7.460214 TGTTATTCCCCACTATAAAGATGGT 57.540 36.000 0.00 0.00 0.00 3.55
918 1242 8.570038 TGTTATTCCCCACTATAAAGATGGTA 57.430 34.615 0.00 0.00 0.00 3.25
919 1243 9.005318 TGTTATTCCCCACTATAAAGATGGTAA 57.995 33.333 0.00 0.00 0.00 2.85
920 1244 9.281371 GTTATTCCCCACTATAAAGATGGTAAC 57.719 37.037 0.00 0.00 0.00 2.50
940 1264 9.138596 TGGTAACATAGACTAGTAACATATGCA 57.861 33.333 1.58 0.00 46.17 3.96
963 1287 9.595823 TGCATGTTATTAGTCTAAGTTACTTCC 57.404 33.333 0.00 0.00 0.00 3.46
964 1288 9.043079 GCATGTTATTAGTCTAAGTTACTTCCC 57.957 37.037 0.00 0.00 0.00 3.97
967 1291 9.317827 TGTTATTAGTCTAAGTTACTTCCCACT 57.682 33.333 0.00 4.98 0.00 4.00
971 1295 9.710818 ATTAGTCTAAGTTACTTCCCACTATGA 57.289 33.333 0.00 0.00 0.00 2.15
972 1296 7.407393 AGTCTAAGTTACTTCCCACTATGAC 57.593 40.000 0.00 0.00 0.00 3.06
973 1297 7.183460 AGTCTAAGTTACTTCCCACTATGACT 58.817 38.462 0.00 1.98 34.02 3.41
974 1298 8.334734 AGTCTAAGTTACTTCCCACTATGACTA 58.665 37.037 0.00 0.00 35.61 2.59
975 1299 8.623030 GTCTAAGTTACTTCCCACTATGACTAG 58.377 40.741 0.00 0.00 0.00 2.57
976 1300 5.855740 AGTTACTTCCCACTATGACTAGC 57.144 43.478 0.00 0.00 0.00 3.42
977 1301 4.650131 AGTTACTTCCCACTATGACTAGCC 59.350 45.833 0.00 0.00 0.00 3.93
1008 1332 8.830201 AAATGCTTTAAATCACAGCACAAATA 57.170 26.923 0.99 0.00 46.09 1.40
1012 1336 6.183360 GCTTTAAATCACAGCACAAATAAGGC 60.183 38.462 0.00 0.00 33.45 4.35
1013 1337 3.492421 AATCACAGCACAAATAAGGCG 57.508 42.857 0.00 0.00 0.00 5.52
1081 1585 7.830697 TGTGTTGATCAATCACAATCTCCTATT 59.169 33.333 27.08 0.00 38.80 1.73
1163 3112 4.388499 ACGTAACCAGCCCAGCCG 62.388 66.667 0.00 0.00 0.00 5.52
1508 3648 2.022129 GTCGAACCTGTGTCGGCAG 61.022 63.158 0.00 0.00 36.31 4.85
1557 4912 6.477053 AGTAGATCAGTGCATGTACTCATT 57.523 37.500 14.07 1.58 28.98 2.57
1559 4914 4.701765 AGATCAGTGCATGTACTCATTCC 58.298 43.478 14.07 0.00 31.15 3.01
1727 5088 6.261603 ACTGTGGTAATAATCGATCTGTACGA 59.738 38.462 0.00 0.00 43.65 3.43
1748 5111 0.029300 CGTGCTTCTGGTGTTGTTGG 59.971 55.000 0.00 0.00 0.00 3.77
1749 5112 0.249031 GTGCTTCTGGTGTTGTTGGC 60.249 55.000 0.00 0.00 0.00 4.52
1751 5114 0.675633 GCTTCTGGTGTTGTTGGCAT 59.324 50.000 0.00 0.00 0.00 4.40
1799 5162 7.309133 GGTCCATCTAAGACTCATCTAGATGTG 60.309 44.444 27.80 26.80 39.04 3.21
1806 5169 9.891828 CTAAGACTCATCTAGATGTGACATAAC 57.108 37.037 31.51 17.97 39.72 1.89
1810 5173 9.838975 GACTCATCTAGATGTGACATAACTATG 57.161 37.037 31.51 7.64 39.72 2.23
1849 5212 6.959639 ATATCATCGCCACCTTATTTTGTT 57.040 33.333 0.00 0.00 0.00 2.83
1902 5265 5.290885 GTCCAAAACAAACAAACCATCTCAC 59.709 40.000 0.00 0.00 0.00 3.51
1903 5266 4.570369 CCAAAACAAACAAACCATCTCACC 59.430 41.667 0.00 0.00 0.00 4.02
1961 5324 4.016444 CCCAACCATTTGTACATGCTAGT 58.984 43.478 0.00 0.00 0.00 2.57
1962 5325 5.189928 CCCAACCATTTGTACATGCTAGTA 58.810 41.667 0.00 0.00 0.00 1.82
1963 5326 5.296780 CCCAACCATTTGTACATGCTAGTAG 59.703 44.000 0.00 0.00 0.00 2.57
1964 5327 5.296780 CCAACCATTTGTACATGCTAGTAGG 59.703 44.000 0.00 0.00 0.00 3.18
1965 5328 4.451900 ACCATTTGTACATGCTAGTAGGC 58.548 43.478 0.00 0.00 0.00 3.93
1966 5329 4.164221 ACCATTTGTACATGCTAGTAGGCT 59.836 41.667 0.00 0.00 0.00 4.58
1967 5330 5.365605 ACCATTTGTACATGCTAGTAGGCTA 59.634 40.000 0.00 0.00 0.00 3.93
1968 5331 5.928839 CCATTTGTACATGCTAGTAGGCTAG 59.071 44.000 0.00 0.00 45.68 3.42
2009 5372 9.766277 CTAGCTATCAGTGCTAAAAAGAAAAAG 57.234 33.333 0.00 0.00 41.70 2.27
2033 5396 4.905412 AAACGAAACTAGCGATCAAGAC 57.095 40.909 0.00 0.00 0.00 3.01
2050 5413 6.579666 TCAAGACAAAGCTAGCAATCAAAT 57.420 33.333 18.83 0.00 0.00 2.32
2051 5414 6.615088 TCAAGACAAAGCTAGCAATCAAATC 58.385 36.000 18.83 4.96 0.00 2.17
2052 5415 6.432162 TCAAGACAAAGCTAGCAATCAAATCT 59.568 34.615 18.83 7.20 0.00 2.40
2053 5416 6.192234 AGACAAAGCTAGCAATCAAATCTG 57.808 37.500 18.83 2.12 0.00 2.90
2054 5417 5.709164 AGACAAAGCTAGCAATCAAATCTGT 59.291 36.000 18.83 5.34 0.00 3.41
2055 5418 5.706916 ACAAAGCTAGCAATCAAATCTGTG 58.293 37.500 18.83 0.22 0.00 3.66
2056 5419 5.242393 ACAAAGCTAGCAATCAAATCTGTGT 59.758 36.000 18.83 0.91 0.00 3.72
2057 5420 5.557891 AAGCTAGCAATCAAATCTGTGTC 57.442 39.130 18.83 0.00 0.00 3.67
2058 5421 4.582869 AGCTAGCAATCAAATCTGTGTCA 58.417 39.130 18.83 0.00 0.00 3.58
2059 5422 5.191426 AGCTAGCAATCAAATCTGTGTCAT 58.809 37.500 18.83 0.00 0.00 3.06
2060 5423 5.651139 AGCTAGCAATCAAATCTGTGTCATT 59.349 36.000 18.83 0.00 0.00 2.57
2061 5424 6.825213 AGCTAGCAATCAAATCTGTGTCATTA 59.175 34.615 18.83 0.00 0.00 1.90
2062 5425 6.909357 GCTAGCAATCAAATCTGTGTCATTAC 59.091 38.462 10.63 0.00 0.00 1.89
2063 5426 7.201679 GCTAGCAATCAAATCTGTGTCATTACT 60.202 37.037 10.63 0.00 0.00 2.24
2064 5427 7.458409 AGCAATCAAATCTGTGTCATTACTT 57.542 32.000 0.00 0.00 0.00 2.24
2065 5428 7.889469 AGCAATCAAATCTGTGTCATTACTTT 58.111 30.769 0.00 0.00 0.00 2.66
2066 5429 8.362639 AGCAATCAAATCTGTGTCATTACTTTT 58.637 29.630 0.00 0.00 0.00 2.27
2067 5430 8.981647 GCAATCAAATCTGTGTCATTACTTTTT 58.018 29.630 0.00 0.00 0.00 1.94
2100 5463 6.879188 TTTTTAAAACGAAGGCTCAAACAG 57.121 33.333 0.00 0.00 0.00 3.16
2101 5464 5.821516 TTTAAAACGAAGGCTCAAACAGA 57.178 34.783 0.00 0.00 0.00 3.41
2110 5473 3.336122 CTCAAACAGAGCCCTGCTT 57.664 52.632 0.00 0.00 44.16 3.91
2111 5474 1.613836 CTCAAACAGAGCCCTGCTTT 58.386 50.000 0.00 0.00 44.16 3.51
2112 5475 1.268899 CTCAAACAGAGCCCTGCTTTG 59.731 52.381 13.33 13.33 44.71 2.77
2113 5476 1.133823 TCAAACAGAGCCCTGCTTTGA 60.134 47.619 16.27 16.27 42.32 2.69
2114 5477 1.682854 CAAACAGAGCCCTGCTTTGAA 59.317 47.619 12.85 0.00 42.32 2.69
2115 5478 2.298163 CAAACAGAGCCCTGCTTTGAAT 59.702 45.455 12.85 0.00 42.32 2.57
2116 5479 2.299326 ACAGAGCCCTGCTTTGAATT 57.701 45.000 12.85 0.00 42.32 2.17
2117 5480 3.439857 ACAGAGCCCTGCTTTGAATTA 57.560 42.857 12.85 0.00 42.32 1.40
2118 5481 3.766545 ACAGAGCCCTGCTTTGAATTAA 58.233 40.909 12.85 0.00 42.32 1.40
2119 5482 3.507622 ACAGAGCCCTGCTTTGAATTAAC 59.492 43.478 12.85 0.00 42.32 2.01
2120 5483 3.507233 CAGAGCCCTGCTTTGAATTAACA 59.493 43.478 0.64 0.00 42.32 2.41
2121 5484 4.022068 CAGAGCCCTGCTTTGAATTAACAA 60.022 41.667 0.64 0.00 42.32 2.83
2122 5485 4.588528 AGAGCCCTGCTTTGAATTAACAAA 59.411 37.500 0.00 0.00 39.88 2.83
2123 5486 5.070313 AGAGCCCTGCTTTGAATTAACAAAA 59.930 36.000 0.00 0.00 39.88 2.44
2124 5487 5.056480 AGCCCTGCTTTGAATTAACAAAAC 58.944 37.500 0.00 0.00 38.90 2.43
2125 5488 4.213270 GCCCTGCTTTGAATTAACAAAACC 59.787 41.667 0.00 0.00 38.90 3.27
2126 5489 5.363939 CCCTGCTTTGAATTAACAAAACCA 58.636 37.500 0.00 0.00 38.90 3.67
2127 5490 5.997129 CCCTGCTTTGAATTAACAAAACCAT 59.003 36.000 0.00 0.00 38.90 3.55
2128 5491 6.147656 CCCTGCTTTGAATTAACAAAACCATC 59.852 38.462 0.00 0.00 38.90 3.51
2129 5492 6.705381 CCTGCTTTGAATTAACAAAACCATCA 59.295 34.615 0.00 0.00 38.90 3.07
2130 5493 7.226325 CCTGCTTTGAATTAACAAAACCATCAA 59.774 33.333 0.00 0.00 38.90 2.57
2131 5494 7.914465 TGCTTTGAATTAACAAAACCATCAAC 58.086 30.769 0.00 0.00 38.90 3.18
2132 5495 7.011857 TGCTTTGAATTAACAAAACCATCAACC 59.988 33.333 0.00 0.00 38.90 3.77
2133 5496 7.470289 TTTGAATTAACAAAACCATCAACCG 57.530 32.000 0.00 0.00 36.92 4.44
2134 5497 5.533482 TGAATTAACAAAACCATCAACCGG 58.467 37.500 0.00 0.00 0.00 5.28
2135 5498 3.372660 TTAACAAAACCATCAACCGGC 57.627 42.857 0.00 0.00 0.00 6.13
2136 5499 0.391228 AACAAAACCATCAACCGGCC 59.609 50.000 0.00 0.00 0.00 6.13
2137 5500 0.757188 ACAAAACCATCAACCGGCCA 60.757 50.000 0.00 0.00 0.00 5.36
2138 5501 0.038343 CAAAACCATCAACCGGCCAG 60.038 55.000 0.00 0.00 0.00 4.85
2140 5503 2.075355 AAACCATCAACCGGCCAGGA 62.075 55.000 18.74 3.02 45.00 3.86
2141 5504 2.075355 AACCATCAACCGGCCAGGAA 62.075 55.000 18.74 5.81 45.00 3.36
2142 5505 1.076777 CCATCAACCGGCCAGGAAT 60.077 57.895 18.74 7.56 45.00 3.01
2143 5506 0.684153 CCATCAACCGGCCAGGAATT 60.684 55.000 18.74 2.72 45.00 2.17
2144 5507 1.409521 CCATCAACCGGCCAGGAATTA 60.410 52.381 18.74 3.67 45.00 1.40
2145 5508 2.586425 CATCAACCGGCCAGGAATTAT 58.414 47.619 18.74 5.51 45.00 1.28
2146 5509 3.497763 CCATCAACCGGCCAGGAATTATA 60.498 47.826 18.74 1.01 45.00 0.98
2147 5510 3.485463 TCAACCGGCCAGGAATTATAG 57.515 47.619 18.74 2.79 45.00 1.31
2148 5511 1.880027 CAACCGGCCAGGAATTATAGC 59.120 52.381 18.74 0.00 45.00 2.97
2149 5512 0.400594 ACCGGCCAGGAATTATAGCC 59.599 55.000 18.74 0.00 45.00 3.93
2151 5514 2.556286 GGCCAGGAATTATAGCCGC 58.444 57.895 0.00 0.00 33.18 6.53
2152 5515 0.960861 GGCCAGGAATTATAGCCGCC 60.961 60.000 0.00 0.00 33.18 6.13
2153 5516 0.960861 GCCAGGAATTATAGCCGCCC 60.961 60.000 0.00 0.00 0.00 6.13
2154 5517 0.400213 CCAGGAATTATAGCCGCCCA 59.600 55.000 0.00 0.00 0.00 5.36
2155 5518 1.004745 CCAGGAATTATAGCCGCCCAT 59.995 52.381 0.00 0.00 0.00 4.00
2156 5519 2.238646 CCAGGAATTATAGCCGCCCATA 59.761 50.000 0.00 0.00 0.00 2.74
2157 5520 3.270877 CAGGAATTATAGCCGCCCATAC 58.729 50.000 0.00 0.00 0.00 2.39
2158 5521 2.910319 AGGAATTATAGCCGCCCATACA 59.090 45.455 0.00 0.00 0.00 2.29
2159 5522 3.329520 AGGAATTATAGCCGCCCATACAA 59.670 43.478 0.00 0.00 0.00 2.41
2160 5523 3.439129 GGAATTATAGCCGCCCATACAAC 59.561 47.826 0.00 0.00 0.00 3.32
2161 5524 2.157834 TTATAGCCGCCCATACAACG 57.842 50.000 0.00 0.00 0.00 4.10
2162 5525 1.330234 TATAGCCGCCCATACAACGA 58.670 50.000 0.00 0.00 0.00 3.85
2163 5526 0.033504 ATAGCCGCCCATACAACGAG 59.966 55.000 0.00 0.00 0.00 4.18
2164 5527 1.038681 TAGCCGCCCATACAACGAGA 61.039 55.000 0.00 0.00 0.00 4.04
2165 5528 1.448893 GCCGCCCATACAACGAGAA 60.449 57.895 0.00 0.00 0.00 2.87
2166 5529 1.022451 GCCGCCCATACAACGAGAAA 61.022 55.000 0.00 0.00 0.00 2.52
2167 5530 1.444836 CCGCCCATACAACGAGAAAA 58.555 50.000 0.00 0.00 0.00 2.29
2168 5531 1.807742 CCGCCCATACAACGAGAAAAA 59.192 47.619 0.00 0.00 0.00 1.94
2192 5555 6.951256 AAAAACAAAGAAACTGAGAACAGC 57.049 33.333 0.00 0.00 46.95 4.40
2193 5556 5.643379 AAACAAAGAAACTGAGAACAGCA 57.357 34.783 0.00 0.00 46.95 4.41
2194 5557 4.889832 ACAAAGAAACTGAGAACAGCAG 57.110 40.909 0.00 0.00 46.95 4.24
2195 5558 4.517285 ACAAAGAAACTGAGAACAGCAGA 58.483 39.130 0.00 0.00 46.95 4.26
2196 5559 5.128919 ACAAAGAAACTGAGAACAGCAGAT 58.871 37.500 0.00 0.00 46.95 2.90
2197 5560 6.291377 ACAAAGAAACTGAGAACAGCAGATA 58.709 36.000 0.00 0.00 46.95 1.98
2198 5561 6.203723 ACAAAGAAACTGAGAACAGCAGATAC 59.796 38.462 0.00 0.00 46.95 2.24
2199 5562 5.474578 AGAAACTGAGAACAGCAGATACA 57.525 39.130 0.00 0.00 46.95 2.29
2200 5563 5.858381 AGAAACTGAGAACAGCAGATACAA 58.142 37.500 0.00 0.00 46.95 2.41
2201 5564 5.931146 AGAAACTGAGAACAGCAGATACAAG 59.069 40.000 0.00 0.00 46.95 3.16
2202 5565 4.199432 ACTGAGAACAGCAGATACAAGG 57.801 45.455 0.00 0.00 46.95 3.61
2203 5566 3.580458 ACTGAGAACAGCAGATACAAGGT 59.420 43.478 0.00 0.00 46.95 3.50
2204 5567 3.930336 TGAGAACAGCAGATACAAGGTG 58.070 45.455 0.00 0.00 39.05 4.00
2205 5568 2.675348 GAGAACAGCAGATACAAGGTGC 59.325 50.000 0.00 0.00 36.76 5.01
2207 5570 3.515502 AGAACAGCAGATACAAGGTGCTA 59.484 43.478 0.00 0.00 45.82 3.49
2208 5571 3.252974 ACAGCAGATACAAGGTGCTAC 57.747 47.619 0.00 0.00 45.82 3.58
2209 5572 2.093447 ACAGCAGATACAAGGTGCTACC 60.093 50.000 0.00 0.00 45.82 3.18
2210 5573 1.137086 AGCAGATACAAGGTGCTACCG 59.863 52.381 0.00 0.00 45.72 4.02
2211 5574 1.134788 GCAGATACAAGGTGCTACCGT 60.135 52.381 0.00 0.00 44.90 4.83
2212 5575 2.100252 GCAGATACAAGGTGCTACCGTA 59.900 50.000 0.00 0.00 44.90 4.02
2213 5576 3.795826 GCAGATACAAGGTGCTACCGTAG 60.796 52.174 0.76 0.76 44.90 3.51
2225 5588 3.612472 CTACCGTAGCAGTCTAGAAGC 57.388 52.381 9.77 9.77 0.00 3.86
2226 5589 1.835494 ACCGTAGCAGTCTAGAAGCA 58.165 50.000 17.72 4.52 0.00 3.91
2227 5590 1.473278 ACCGTAGCAGTCTAGAAGCAC 59.527 52.381 17.72 12.90 0.00 4.40
2228 5591 1.746220 CCGTAGCAGTCTAGAAGCACT 59.254 52.381 17.72 6.23 0.00 4.40
2229 5592 2.943690 CCGTAGCAGTCTAGAAGCACTA 59.056 50.000 17.72 5.38 0.00 2.74
2230 5593 3.242804 CCGTAGCAGTCTAGAAGCACTAC 60.243 52.174 17.72 14.08 0.00 2.73
2231 5594 3.374367 CGTAGCAGTCTAGAAGCACTACA 59.626 47.826 17.72 0.00 0.00 2.74
2232 5595 4.142665 CGTAGCAGTCTAGAAGCACTACAA 60.143 45.833 17.72 0.00 0.00 2.41
2233 5596 4.181309 AGCAGTCTAGAAGCACTACAAC 57.819 45.455 17.72 0.00 0.00 3.32
2234 5597 3.574396 AGCAGTCTAGAAGCACTACAACA 59.426 43.478 17.72 0.00 0.00 3.33
2235 5598 3.923461 GCAGTCTAGAAGCACTACAACAG 59.077 47.826 12.26 0.00 0.00 3.16
2236 5599 4.321304 GCAGTCTAGAAGCACTACAACAGA 60.321 45.833 12.26 0.00 0.00 3.41
2237 5600 5.773575 CAGTCTAGAAGCACTACAACAGAA 58.226 41.667 0.00 0.00 0.00 3.02
2238 5601 6.216569 CAGTCTAGAAGCACTACAACAGAAA 58.783 40.000 0.00 0.00 0.00 2.52
2239 5602 6.364706 CAGTCTAGAAGCACTACAACAGAAAG 59.635 42.308 0.00 0.00 0.00 2.62
2240 5603 5.119434 GTCTAGAAGCACTACAACAGAAAGC 59.881 44.000 0.00 0.00 0.00 3.51
2241 5604 3.808728 AGAAGCACTACAACAGAAAGCA 58.191 40.909 0.00 0.00 0.00 3.91
2242 5605 3.561725 AGAAGCACTACAACAGAAAGCAC 59.438 43.478 0.00 0.00 0.00 4.40
2243 5606 2.917933 AGCACTACAACAGAAAGCACA 58.082 42.857 0.00 0.00 0.00 4.57
2244 5607 3.278574 AGCACTACAACAGAAAGCACAA 58.721 40.909 0.00 0.00 0.00 3.33
2245 5608 3.694072 AGCACTACAACAGAAAGCACAAA 59.306 39.130 0.00 0.00 0.00 2.83
2246 5609 4.157656 AGCACTACAACAGAAAGCACAAAA 59.842 37.500 0.00 0.00 0.00 2.44
2247 5610 4.500477 GCACTACAACAGAAAGCACAAAAG 59.500 41.667 0.00 0.00 0.00 2.27
2248 5611 5.676079 GCACTACAACAGAAAGCACAAAAGA 60.676 40.000 0.00 0.00 0.00 2.52
2249 5612 6.498304 CACTACAACAGAAAGCACAAAAGAT 58.502 36.000 0.00 0.00 0.00 2.40
2250 5613 7.639039 CACTACAACAGAAAGCACAAAAGATA 58.361 34.615 0.00 0.00 0.00 1.98
2251 5614 7.587757 CACTACAACAGAAAGCACAAAAGATAC 59.412 37.037 0.00 0.00 0.00 2.24
2252 5615 6.699575 ACAACAGAAAGCACAAAAGATACT 57.300 33.333 0.00 0.00 0.00 2.12
2284 5647 4.634883 ACTACTCGAAGCTAACGATCAGAA 59.365 41.667 20.20 6.89 39.02 3.02
2290 5653 6.762108 TCGAAGCTAACGATCAGAATTTTTC 58.238 36.000 11.02 0.00 34.85 2.29
2352 5716 0.521291 GCGCTGCCACTGATTTGTTA 59.479 50.000 0.00 0.00 0.00 2.41
2398 5762 1.688772 TACCGCTGGCTTCTAGTAGG 58.311 55.000 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 4.760047 CGAGTTGGTCCCCAGCCG 62.760 72.222 0.00 0.00 35.27 5.52
13 14 4.410400 GGGCGAGTTGGTCCCCAG 62.410 72.222 0.00 0.00 36.26 4.45
17 18 2.732619 CCTAGGGGCGAGTTGGTCC 61.733 68.421 0.00 0.00 0.00 4.46
18 19 2.901042 CCTAGGGGCGAGTTGGTC 59.099 66.667 0.00 0.00 0.00 4.02
28 29 0.541392 GCAAAAATTGGGCCTAGGGG 59.459 55.000 11.72 0.00 0.00 4.79
29 30 0.175531 CGCAAAAATTGGGCCTAGGG 59.824 55.000 11.72 0.00 36.79 3.53
30 31 3.739077 CGCAAAAATTGGGCCTAGG 57.261 52.632 3.67 3.67 36.79 3.02
36 37 3.117812 GCCGGCGCAAAAATTGGG 61.118 61.111 12.58 3.09 45.41 4.12
37 38 2.048316 AGCCGGCGCAAAAATTGG 60.048 55.556 23.20 0.00 37.52 3.16
38 39 1.372748 TGAGCCGGCGCAAAAATTG 60.373 52.632 31.47 0.00 37.52 2.32
39 40 1.372872 GTGAGCCGGCGCAAAAATT 60.373 52.632 34.87 7.50 37.52 1.82
40 41 2.258286 GTGAGCCGGCGCAAAAAT 59.742 55.556 34.87 8.42 37.52 1.82
41 42 3.972276 GGTGAGCCGGCGCAAAAA 61.972 61.111 34.87 9.47 37.52 1.94
59 60 2.186826 CCTAAAATCGCCGCCTGGG 61.187 63.158 0.00 0.00 39.58 4.45
60 61 2.834618 GCCTAAAATCGCCGCCTGG 61.835 63.158 0.00 0.00 38.77 4.45
61 62 2.715624 GCCTAAAATCGCCGCCTG 59.284 61.111 0.00 0.00 0.00 4.85
62 63 2.895372 CGCCTAAAATCGCCGCCT 60.895 61.111 0.00 0.00 0.00 5.52
63 64 4.607606 GCGCCTAAAATCGCCGCC 62.608 66.667 0.00 0.00 45.01 6.13
93 94 0.609131 AAGGGCATCTCCAACCGTTG 60.609 55.000 4.12 4.12 36.21 4.10
94 95 0.988832 TAAGGGCATCTCCAACCGTT 59.011 50.000 0.00 0.00 36.21 4.44
95 96 0.541863 CTAAGGGCATCTCCAACCGT 59.458 55.000 0.00 0.00 36.21 4.83
96 97 0.815615 GCTAAGGGCATCTCCAACCG 60.816 60.000 0.00 0.00 41.35 4.44
97 98 0.548510 AGCTAAGGGCATCTCCAACC 59.451 55.000 0.00 0.00 44.79 3.77
98 99 1.488393 AGAGCTAAGGGCATCTCCAAC 59.512 52.381 0.00 0.00 44.79 3.77
99 100 1.765314 GAGAGCTAAGGGCATCTCCAA 59.235 52.381 0.00 0.00 44.79 3.53
100 101 1.418334 GAGAGCTAAGGGCATCTCCA 58.582 55.000 0.00 0.00 44.79 3.86
101 102 0.684535 GGAGAGCTAAGGGCATCTCC 59.315 60.000 14.91 14.91 46.83 3.71
102 103 1.418334 TGGAGAGCTAAGGGCATCTC 58.582 55.000 0.00 0.00 44.79 2.75
103 104 1.885049 TTGGAGAGCTAAGGGCATCT 58.115 50.000 0.00 0.00 44.79 2.90
104 105 2.947127 ATTGGAGAGCTAAGGGCATC 57.053 50.000 0.00 0.00 44.79 3.91
105 106 4.660168 CAATATTGGAGAGCTAAGGGCAT 58.340 43.478 7.62 0.00 44.79 4.40
106 107 3.748668 GCAATATTGGAGAGCTAAGGGCA 60.749 47.826 17.02 0.00 44.79 5.36
107 108 2.816672 GCAATATTGGAGAGCTAAGGGC 59.183 50.000 17.02 0.00 42.19 5.19
108 109 4.363991 AGCAATATTGGAGAGCTAAGGG 57.636 45.455 17.02 0.00 33.06 3.95
109 110 7.716998 TCTTAAAGCAATATTGGAGAGCTAAGG 59.283 37.037 17.02 1.46 34.66 2.69
110 111 8.668510 TCTTAAAGCAATATTGGAGAGCTAAG 57.331 34.615 17.02 8.66 34.66 2.18
111 112 9.277783 GATCTTAAAGCAATATTGGAGAGCTAA 57.722 33.333 17.02 0.00 34.66 3.09
117 118 7.088905 GCATGGATCTTAAAGCAATATTGGAG 58.911 38.462 17.02 0.00 0.00 3.86
126 127 2.677836 GTGTCGCATGGATCTTAAAGCA 59.322 45.455 0.00 0.00 0.00 3.91
134 135 3.262420 AGTTAGTTGTGTCGCATGGATC 58.738 45.455 0.00 0.00 0.00 3.36
139 140 7.224753 CCATATAGAAAGTTAGTTGTGTCGCAT 59.775 37.037 0.00 0.00 0.00 4.73
206 207 2.884639 ACGCTGCATAGGTTTGAACTTT 59.115 40.909 0.00 0.00 0.00 2.66
225 226 5.917541 TCTAGTTAGAAAGTTTTGCCACG 57.082 39.130 0.00 0.00 0.00 4.94
226 227 8.100508 AGATTCTAGTTAGAAAGTTTTGCCAC 57.899 34.615 5.75 0.00 44.63 5.01
366 367 9.114952 GGCAAAGCTTTCTAATTAGAATCTAGT 57.885 33.333 24.84 14.50 41.52 2.57
377 378 3.305608 GCAGTGTGGCAAAGCTTTCTAAT 60.306 43.478 9.23 0.00 0.00 1.73
461 463 0.102844 ATTTCCCGCATGGCAATTCG 59.897 50.000 0.00 0.00 0.00 3.34
466 468 1.076118 ATCCATTTCCCGCATGGCA 60.076 52.632 0.00 0.00 41.10 4.92
467 469 1.364901 CATCCATTTCCCGCATGGC 59.635 57.895 0.00 0.00 41.10 4.40
468 470 2.043625 CCATCCATTTCCCGCATGG 58.956 57.895 0.00 0.00 42.51 3.66
469 471 1.111116 AGCCATCCATTTCCCGCATG 61.111 55.000 0.00 0.00 0.00 4.06
471 473 0.179020 CTAGCCATCCATTTCCCGCA 60.179 55.000 0.00 0.00 0.00 5.69
474 476 5.880901 TCTTTATCTAGCCATCCATTTCCC 58.119 41.667 0.00 0.00 0.00 3.97
532 534 4.415332 CGTCACCGTCCCTCGTGG 62.415 72.222 0.00 0.00 37.94 4.94
535 537 4.456253 CGTCGTCACCGTCCCTCG 62.456 72.222 0.00 0.00 39.52 4.63
536 538 4.773117 GCGTCGTCACCGTCCCTC 62.773 72.222 0.00 0.00 35.01 4.30
563 565 4.379243 CACAACCTCCCGCTCGCT 62.379 66.667 0.00 0.00 0.00 4.93
592 915 0.462225 TCAACCCAAAACGACGAGCA 60.462 50.000 0.00 0.00 0.00 4.26
596 919 3.359654 CTTCTTTCAACCCAAAACGACG 58.640 45.455 0.00 0.00 0.00 5.12
621 945 1.891919 GGCAACAGACAGCCGTTGA 60.892 57.895 6.46 0.00 44.20 3.18
622 946 2.639286 GGCAACAGACAGCCGTTG 59.361 61.111 0.00 0.00 44.26 4.10
657 981 1.799916 GAAATTTCGGCCGGTTGCG 60.800 57.895 27.83 0.00 42.61 4.85
695 1019 4.160329 TCCCACTATGACTAGCCTAATGG 58.840 47.826 0.00 0.00 0.00 3.16
696 1020 4.835615 ACTCCCACTATGACTAGCCTAATG 59.164 45.833 0.00 0.00 0.00 1.90
697 1021 5.081315 ACTCCCACTATGACTAGCCTAAT 57.919 43.478 0.00 0.00 0.00 1.73
698 1022 4.537945 ACTCCCACTATGACTAGCCTAA 57.462 45.455 0.00 0.00 0.00 2.69
699 1023 5.103813 TGTTACTCCCACTATGACTAGCCTA 60.104 44.000 0.00 0.00 0.00 3.93
700 1024 4.216708 GTTACTCCCACTATGACTAGCCT 58.783 47.826 0.00 0.00 0.00 4.58
701 1025 3.958798 TGTTACTCCCACTATGACTAGCC 59.041 47.826 0.00 0.00 0.00 3.93
704 1028 9.570468 CTTACTATGTTACTCCCACTATGACTA 57.430 37.037 0.00 0.00 0.00 2.59
706 1030 8.235359 ACTTACTATGTTACTCCCACTATGAC 57.765 38.462 0.00 0.00 0.00 3.06
707 1031 9.925545 TTACTTACTATGTTACTCCCACTATGA 57.074 33.333 0.00 0.00 0.00 2.15
760 1084 9.685276 CCTCCTCATTAAATACATGCCATATAA 57.315 33.333 0.00 0.00 0.00 0.98
761 1085 8.274322 CCCTCCTCATTAAATACATGCCATATA 58.726 37.037 0.00 0.00 0.00 0.86
762 1086 7.036644 TCCCTCCTCATTAAATACATGCCATAT 60.037 37.037 0.00 0.00 0.00 1.78
763 1087 6.274436 TCCCTCCTCATTAAATACATGCCATA 59.726 38.462 0.00 0.00 0.00 2.74
764 1088 5.074929 TCCCTCCTCATTAAATACATGCCAT 59.925 40.000 0.00 0.00 0.00 4.40
765 1089 4.415179 TCCCTCCTCATTAAATACATGCCA 59.585 41.667 0.00 0.00 0.00 4.92
766 1090 4.985538 TCCCTCCTCATTAAATACATGCC 58.014 43.478 0.00 0.00 0.00 4.40
767 1091 5.869579 TCTCCCTCCTCATTAAATACATGC 58.130 41.667 0.00 0.00 0.00 4.06
768 1092 7.308450 TCTCTCCCTCCTCATTAAATACATG 57.692 40.000 0.00 0.00 0.00 3.21
769 1093 7.515514 ACATCTCTCCCTCCTCATTAAATACAT 59.484 37.037 0.00 0.00 0.00 2.29
770 1094 6.846505 ACATCTCTCCCTCCTCATTAAATACA 59.153 38.462 0.00 0.00 0.00 2.29
771 1095 7.309770 ACATCTCTCCCTCCTCATTAAATAC 57.690 40.000 0.00 0.00 0.00 1.89
772 1096 7.937700 AACATCTCTCCCTCCTCATTAAATA 57.062 36.000 0.00 0.00 0.00 1.40
773 1097 6.838401 AACATCTCTCCCTCCTCATTAAAT 57.162 37.500 0.00 0.00 0.00 1.40
774 1098 6.418101 CAAACATCTCTCCCTCCTCATTAAA 58.582 40.000 0.00 0.00 0.00 1.52
775 1099 5.104360 CCAAACATCTCTCCCTCCTCATTAA 60.104 44.000 0.00 0.00 0.00 1.40
776 1100 4.410228 CCAAACATCTCTCCCTCCTCATTA 59.590 45.833 0.00 0.00 0.00 1.90
777 1101 3.201708 CCAAACATCTCTCCCTCCTCATT 59.798 47.826 0.00 0.00 0.00 2.57
778 1102 2.776536 CCAAACATCTCTCCCTCCTCAT 59.223 50.000 0.00 0.00 0.00 2.90
779 1103 2.191400 CCAAACATCTCTCCCTCCTCA 58.809 52.381 0.00 0.00 0.00 3.86
780 1104 2.433970 CTCCAAACATCTCTCCCTCCTC 59.566 54.545 0.00 0.00 0.00 3.71
781 1105 2.225753 ACTCCAAACATCTCTCCCTCCT 60.226 50.000 0.00 0.00 0.00 3.69
782 1106 2.192263 ACTCCAAACATCTCTCCCTCC 58.808 52.381 0.00 0.00 0.00 4.30
783 1107 4.223032 TGTTACTCCAAACATCTCTCCCTC 59.777 45.833 0.00 0.00 34.50 4.30
784 1108 4.168101 TGTTACTCCAAACATCTCTCCCT 58.832 43.478 0.00 0.00 34.50 4.20
785 1109 4.553330 TGTTACTCCAAACATCTCTCCC 57.447 45.455 0.00 0.00 34.50 4.30
804 1128 8.740906 ACGCTATGCTAGAGTAACATATTATGT 58.259 33.333 3.40 3.40 37.05 2.29
808 1132 8.407064 GGATACGCTATGCTAGAGTAACATATT 58.593 37.037 0.00 0.00 42.78 1.28
809 1133 7.776030 AGGATACGCTATGCTAGAGTAACATAT 59.224 37.037 0.00 0.00 42.78 1.78
810 1134 7.110810 AGGATACGCTATGCTAGAGTAACATA 58.889 38.462 0.00 0.00 42.78 2.29
811 1135 5.946972 AGGATACGCTATGCTAGAGTAACAT 59.053 40.000 0.00 4.39 42.78 2.71
812 1136 5.314529 AGGATACGCTATGCTAGAGTAACA 58.685 41.667 0.00 0.00 42.78 2.41
813 1137 5.883503 AGGATACGCTATGCTAGAGTAAC 57.116 43.478 0.00 7.74 42.78 2.50
814 1138 6.598457 CCTTAGGATACGCTATGCTAGAGTAA 59.402 42.308 0.00 0.00 42.78 2.24
815 1139 6.114089 CCTTAGGATACGCTATGCTAGAGTA 58.886 44.000 0.00 8.42 43.47 2.59
816 1140 4.944930 CCTTAGGATACGCTATGCTAGAGT 59.055 45.833 0.00 5.31 39.70 3.24
817 1141 4.201970 GCCTTAGGATACGCTATGCTAGAG 60.202 50.000 0.69 7.15 39.70 2.43
818 1142 3.695060 GCCTTAGGATACGCTATGCTAGA 59.305 47.826 0.69 0.00 39.70 2.43
819 1143 3.444034 TGCCTTAGGATACGCTATGCTAG 59.556 47.826 0.69 0.00 39.70 3.42
820 1144 3.427573 TGCCTTAGGATACGCTATGCTA 58.572 45.455 0.69 3.39 46.39 3.49
821 1145 2.248248 TGCCTTAGGATACGCTATGCT 58.752 47.619 0.69 4.90 46.39 3.79
822 1146 2.743636 TGCCTTAGGATACGCTATGC 57.256 50.000 0.69 0.00 46.39 3.14
823 1147 5.700832 TCATTTTGCCTTAGGATACGCTATG 59.299 40.000 0.69 0.00 46.39 2.23
824 1148 5.865085 TCATTTTGCCTTAGGATACGCTAT 58.135 37.500 0.69 0.00 46.39 2.97
825 1149 5.163343 ACTCATTTTGCCTTAGGATACGCTA 60.163 40.000 0.69 0.00 46.39 4.26
826 1150 4.130118 CTCATTTTGCCTTAGGATACGCT 58.870 43.478 0.69 0.00 46.39 5.07
827 1151 3.877508 ACTCATTTTGCCTTAGGATACGC 59.122 43.478 0.69 0.00 46.39 4.42
828 1152 5.360591 AGACTCATTTTGCCTTAGGATACG 58.639 41.667 0.69 0.00 46.39 3.06
829 1153 7.272978 TGTAGACTCATTTTGCCTTAGGATAC 58.727 38.462 0.69 0.00 0.00 2.24
830 1154 7.432148 TGTAGACTCATTTTGCCTTAGGATA 57.568 36.000 0.69 0.00 0.00 2.59
831 1155 6.313519 TGTAGACTCATTTTGCCTTAGGAT 57.686 37.500 0.69 0.00 0.00 3.24
832 1156 5.755409 TGTAGACTCATTTTGCCTTAGGA 57.245 39.130 0.69 0.00 0.00 2.94
833 1157 6.352516 AGATGTAGACTCATTTTGCCTTAGG 58.647 40.000 0.00 0.00 0.00 2.69
834 1158 7.271511 AGAGATGTAGACTCATTTTGCCTTAG 58.728 38.462 0.00 0.00 36.91 2.18
835 1159 7.187824 AGAGATGTAGACTCATTTTGCCTTA 57.812 36.000 0.00 0.00 36.91 2.69
836 1160 6.059787 AGAGATGTAGACTCATTTTGCCTT 57.940 37.500 0.00 0.00 36.91 4.35
837 1161 5.690464 AGAGATGTAGACTCATTTTGCCT 57.310 39.130 0.00 0.00 36.91 4.75
838 1162 7.849804 TTAAGAGATGTAGACTCATTTTGCC 57.150 36.000 0.00 0.00 36.91 4.52
876 1200 9.944376 GGGAATAACATATGTGTAGTATCATGT 57.056 33.333 9.63 0.00 37.67 3.21
877 1201 9.383519 GGGGAATAACATATGTGTAGTATCATG 57.616 37.037 9.63 0.00 37.67 3.07
878 1202 9.111519 TGGGGAATAACATATGTGTAGTATCAT 57.888 33.333 9.63 0.00 37.67 2.45
879 1203 8.372459 GTGGGGAATAACATATGTGTAGTATCA 58.628 37.037 9.63 1.69 37.67 2.15
880 1204 8.594550 AGTGGGGAATAACATATGTGTAGTATC 58.405 37.037 9.63 2.90 37.67 2.24
881 1205 8.506196 AGTGGGGAATAACATATGTGTAGTAT 57.494 34.615 9.63 0.41 37.67 2.12
882 1206 7.924358 AGTGGGGAATAACATATGTGTAGTA 57.076 36.000 9.63 0.00 37.67 1.82
883 1207 6.824958 AGTGGGGAATAACATATGTGTAGT 57.175 37.500 9.63 3.66 37.67 2.73
886 1210 9.793259 CTTTATAGTGGGGAATAACATATGTGT 57.207 33.333 9.63 2.63 41.28 3.72
891 1215 9.177927 ACCATCTTTATAGTGGGGAATAACATA 57.822 33.333 0.00 0.00 37.33 2.29
892 1216 8.057246 ACCATCTTTATAGTGGGGAATAACAT 57.943 34.615 0.00 0.00 37.33 2.71
893 1217 7.460214 ACCATCTTTATAGTGGGGAATAACA 57.540 36.000 0.00 0.00 37.33 2.41
894 1218 9.281371 GTTACCATCTTTATAGTGGGGAATAAC 57.719 37.037 0.00 0.00 37.33 1.89
895 1219 9.005318 TGTTACCATCTTTATAGTGGGGAATAA 57.995 33.333 0.00 0.00 37.33 1.40
896 1220 8.570038 TGTTACCATCTTTATAGTGGGGAATA 57.430 34.615 0.00 0.00 37.33 1.75
897 1221 7.460214 TGTTACCATCTTTATAGTGGGGAAT 57.540 36.000 0.00 0.00 37.33 3.01
898 1222 6.894735 TGTTACCATCTTTATAGTGGGGAA 57.105 37.500 0.00 0.00 37.33 3.97
899 1223 8.014263 TCTATGTTACCATCTTTATAGTGGGGA 58.986 37.037 0.00 0.00 37.33 4.81
900 1224 8.095169 GTCTATGTTACCATCTTTATAGTGGGG 58.905 40.741 0.00 0.00 37.33 4.96
901 1225 8.871125 AGTCTATGTTACCATCTTTATAGTGGG 58.129 37.037 0.00 0.00 37.33 4.61
914 1238 9.138596 TGCATATGTTACTAGTCTATGTTACCA 57.861 33.333 0.00 0.00 0.00 3.25
937 1261 9.595823 GGAAGTAACTTAGACTAATAACATGCA 57.404 33.333 0.00 0.00 0.00 3.96
938 1262 9.043079 GGGAAGTAACTTAGACTAATAACATGC 57.957 37.037 0.00 0.00 0.00 4.06
941 1265 9.317827 AGTGGGAAGTAACTTAGACTAATAACA 57.682 33.333 0.00 0.00 0.00 2.41
945 1269 9.710818 TCATAGTGGGAAGTAACTTAGACTAAT 57.289 33.333 0.00 0.00 0.00 1.73
946 1270 8.964772 GTCATAGTGGGAAGTAACTTAGACTAA 58.035 37.037 0.00 0.00 31.58 2.24
947 1271 8.334734 AGTCATAGTGGGAAGTAACTTAGACTA 58.665 37.037 0.00 0.00 37.46 2.59
948 1272 7.183460 AGTCATAGTGGGAAGTAACTTAGACT 58.817 38.462 0.00 0.00 35.89 3.24
949 1273 7.407393 AGTCATAGTGGGAAGTAACTTAGAC 57.593 40.000 0.00 0.00 33.07 2.59
950 1274 7.284944 GCTAGTCATAGTGGGAAGTAACTTAGA 59.715 40.741 0.00 0.00 0.00 2.10
951 1275 7.427214 GCTAGTCATAGTGGGAAGTAACTTAG 58.573 42.308 0.00 0.00 0.00 2.18
952 1276 6.323225 GGCTAGTCATAGTGGGAAGTAACTTA 59.677 42.308 0.00 0.00 0.00 2.24
953 1277 5.128991 GGCTAGTCATAGTGGGAAGTAACTT 59.871 44.000 0.00 0.00 0.00 2.66
954 1278 4.650131 GGCTAGTCATAGTGGGAAGTAACT 59.350 45.833 0.00 0.00 0.00 2.24
955 1279 4.650131 AGGCTAGTCATAGTGGGAAGTAAC 59.350 45.833 0.00 0.00 0.00 2.50
956 1280 4.880164 AGGCTAGTCATAGTGGGAAGTAA 58.120 43.478 0.00 0.00 0.00 2.24
957 1281 4.537945 AGGCTAGTCATAGTGGGAAGTA 57.462 45.455 0.00 0.00 0.00 2.24
958 1282 3.406512 AGGCTAGTCATAGTGGGAAGT 57.593 47.619 0.00 0.00 0.00 3.01
959 1283 4.896482 ACTAAGGCTAGTCATAGTGGGAAG 59.104 45.833 11.27 0.00 32.61 3.46
960 1284 4.880164 ACTAAGGCTAGTCATAGTGGGAA 58.120 43.478 11.27 0.00 32.61 3.97
961 1285 4.537945 ACTAAGGCTAGTCATAGTGGGA 57.462 45.455 11.27 0.00 32.61 4.37
962 1286 6.726490 TTTACTAAGGCTAGTCATAGTGGG 57.274 41.667 19.76 0.00 39.23 4.61
963 1287 6.647067 GCATTTACTAAGGCTAGTCATAGTGG 59.353 42.308 19.76 9.37 39.23 4.00
964 1288 7.644986 GCATTTACTAAGGCTAGTCATAGTG 57.355 40.000 19.76 6.55 39.23 2.74
975 1299 7.220875 GCTGTGATTTAAAGCATTTACTAAGGC 59.779 37.037 9.70 1.29 40.86 4.35
976 1300 8.243426 TGCTGTGATTTAAAGCATTTACTAAGG 58.757 33.333 9.70 0.00 40.86 2.69
1008 1332 3.685139 TTCAATTCTCTGAGACGCCTT 57.315 42.857 6.92 0.00 0.00 4.35
1012 1336 4.424626 TCGGAATTCAATTCTCTGAGACG 58.575 43.478 6.92 4.65 39.24 4.18
1013 1337 6.727824 TTTCGGAATTCAATTCTCTGAGAC 57.272 37.500 6.92 0.00 39.24 3.36
1081 1585 4.094294 GCGTTTGGCTTCATCAGTATGTAA 59.906 41.667 0.00 0.00 39.11 2.41
1187 3136 4.166011 GCACGCGATGAGTTGCCC 62.166 66.667 15.93 0.00 0.00 5.36
1536 3890 5.600069 AGGAATGAGTACATGCACTGATCTA 59.400 40.000 2.49 0.00 36.79 1.98
1537 3891 4.408270 AGGAATGAGTACATGCACTGATCT 59.592 41.667 2.49 0.00 36.79 2.75
1538 3892 4.510711 CAGGAATGAGTACATGCACTGATC 59.489 45.833 2.49 0.00 35.92 2.92
1557 4912 1.998438 TAAAGATGCCCGGCCAGGA 60.998 57.895 9.99 0.00 45.00 3.86
1559 4914 0.394352 AAGTAAAGATGCCCGGCCAG 60.394 55.000 7.03 0.00 0.00 4.85
1727 5088 0.748005 AACAACACCAGAAGCACGCT 60.748 50.000 0.00 0.00 0.00 5.07
1772 5135 6.523035 TCTAGATGAGTCTTAGATGGACCT 57.477 41.667 0.00 0.00 35.87 3.85
1774 5137 7.446931 TCACATCTAGATGAGTCTTAGATGGAC 59.553 40.741 34.16 0.00 41.17 4.02
1777 5140 8.164058 TGTCACATCTAGATGAGTCTTAGATG 57.836 38.462 34.16 23.52 41.75 2.90
1785 5148 9.360901 ACATAGTTATGTCACATCTAGATGAGT 57.639 33.333 34.16 17.35 42.96 3.41
1828 5191 6.959639 ATAACAAAATAAGGTGGCGATGAT 57.040 33.333 0.00 0.00 0.00 2.45
1897 5260 2.283676 GGACGTGAGGGGGTGAGA 60.284 66.667 0.00 0.00 0.00 3.27
1965 5328 2.861375 GCTTCGTGCTAGTCGCTAG 58.139 57.895 8.87 8.87 40.11 3.42
1977 5340 2.028130 AGCACTGATAGCTAGCTTCGT 58.972 47.619 24.88 16.94 41.32 3.85
2009 5372 5.784139 GTCTTGATCGCTAGTTTCGTTTTTC 59.216 40.000 0.00 0.00 0.00 2.29
2033 5396 5.706916 ACACAGATTTGATTGCTAGCTTTG 58.293 37.500 17.23 1.60 0.00 2.77
2077 5440 6.622549 TCTGTTTGAGCCTTCGTTTTAAAAA 58.377 32.000 1.31 0.00 0.00 1.94
2078 5441 6.197364 TCTGTTTGAGCCTTCGTTTTAAAA 57.803 33.333 0.00 0.00 0.00 1.52
2079 5442 5.816919 CTCTGTTTGAGCCTTCGTTTTAAA 58.183 37.500 0.00 0.00 35.84 1.52
2080 5443 5.418310 CTCTGTTTGAGCCTTCGTTTTAA 57.582 39.130 0.00 0.00 35.84 1.52
2082 5445 3.971032 CTCTGTTTGAGCCTTCGTTTT 57.029 42.857 0.00 0.00 35.84 2.43
2092 5455 1.268899 CAAAGCAGGGCTCTGTTTGAG 59.731 52.381 25.16 15.33 42.34 3.02
2093 5456 1.133823 TCAAAGCAGGGCTCTGTTTGA 60.134 47.619 26.68 26.68 42.34 2.69
2094 5457 1.321474 TCAAAGCAGGGCTCTGTTTG 58.679 50.000 24.18 24.18 42.34 2.93
2095 5458 2.071778 TTCAAAGCAGGGCTCTGTTT 57.928 45.000 16.66 13.45 44.50 2.83
2096 5459 2.299326 ATTCAAAGCAGGGCTCTGTT 57.701 45.000 16.66 6.20 42.78 3.16
2097 5460 2.299326 AATTCAAAGCAGGGCTCTGT 57.701 45.000 16.66 0.00 42.78 3.41
2098 5461 3.507233 TGTTAATTCAAAGCAGGGCTCTG 59.493 43.478 10.01 10.01 38.25 3.35
2099 5462 3.766545 TGTTAATTCAAAGCAGGGCTCT 58.233 40.909 0.00 0.00 38.25 4.09
2100 5463 4.519540 TTGTTAATTCAAAGCAGGGCTC 57.480 40.909 0.00 0.00 38.25 4.70
2101 5464 4.953940 TTTGTTAATTCAAAGCAGGGCT 57.046 36.364 0.00 0.00 42.56 5.19
2102 5465 4.213270 GGTTTTGTTAATTCAAAGCAGGGC 59.787 41.667 8.16 0.00 39.22 5.19
2103 5466 5.363939 TGGTTTTGTTAATTCAAAGCAGGG 58.636 37.500 8.16 0.00 39.22 4.45
2104 5467 6.705381 TGATGGTTTTGTTAATTCAAAGCAGG 59.295 34.615 11.86 0.00 39.22 4.85
2105 5468 7.712264 TGATGGTTTTGTTAATTCAAAGCAG 57.288 32.000 11.86 0.00 39.22 4.24
2106 5469 7.011857 GGTTGATGGTTTTGTTAATTCAAAGCA 59.988 33.333 9.77 9.77 39.22 3.91
2107 5470 7.351981 GGTTGATGGTTTTGTTAATTCAAAGC 58.648 34.615 0.00 0.00 38.32 3.51
2108 5471 7.307101 CCGGTTGATGGTTTTGTTAATTCAAAG 60.307 37.037 0.00 0.00 38.32 2.77
2109 5472 6.480320 CCGGTTGATGGTTTTGTTAATTCAAA 59.520 34.615 0.00 0.00 35.83 2.69
2110 5473 5.986135 CCGGTTGATGGTTTTGTTAATTCAA 59.014 36.000 0.00 0.00 0.00 2.69
2111 5474 5.533482 CCGGTTGATGGTTTTGTTAATTCA 58.467 37.500 0.00 0.00 0.00 2.57
2112 5475 4.387559 GCCGGTTGATGGTTTTGTTAATTC 59.612 41.667 1.90 0.00 0.00 2.17
2113 5476 4.311606 GCCGGTTGATGGTTTTGTTAATT 58.688 39.130 1.90 0.00 0.00 1.40
2114 5477 3.306433 GGCCGGTTGATGGTTTTGTTAAT 60.306 43.478 1.90 0.00 0.00 1.40
2115 5478 2.036089 GGCCGGTTGATGGTTTTGTTAA 59.964 45.455 1.90 0.00 0.00 2.01
2116 5479 1.614413 GGCCGGTTGATGGTTTTGTTA 59.386 47.619 1.90 0.00 0.00 2.41
2117 5480 0.391228 GGCCGGTTGATGGTTTTGTT 59.609 50.000 1.90 0.00 0.00 2.83
2118 5481 0.757188 TGGCCGGTTGATGGTTTTGT 60.757 50.000 1.90 0.00 0.00 2.83
2119 5482 0.038343 CTGGCCGGTTGATGGTTTTG 60.038 55.000 2.29 0.00 0.00 2.44
2120 5483 1.184970 CCTGGCCGGTTGATGGTTTT 61.185 55.000 11.58 0.00 0.00 2.43
2121 5484 1.606313 CCTGGCCGGTTGATGGTTT 60.606 57.895 11.58 0.00 0.00 3.27
2122 5485 2.035626 CCTGGCCGGTTGATGGTT 59.964 61.111 11.58 0.00 0.00 3.67
2123 5486 1.863155 ATTCCTGGCCGGTTGATGGT 61.863 55.000 11.58 0.00 0.00 3.55
2124 5487 0.684153 AATTCCTGGCCGGTTGATGG 60.684 55.000 11.58 0.00 0.00 3.51
2125 5488 2.051334 TAATTCCTGGCCGGTTGATG 57.949 50.000 11.58 0.00 0.00 3.07
2126 5489 3.810743 GCTATAATTCCTGGCCGGTTGAT 60.811 47.826 11.58 0.00 0.00 2.57
2127 5490 2.486548 GCTATAATTCCTGGCCGGTTGA 60.487 50.000 11.58 0.00 0.00 3.18
2128 5491 1.880027 GCTATAATTCCTGGCCGGTTG 59.120 52.381 11.58 0.00 0.00 3.77
2129 5492 1.202891 GGCTATAATTCCTGGCCGGTT 60.203 52.381 11.58 0.41 33.30 4.44
2130 5493 0.400594 GGCTATAATTCCTGGCCGGT 59.599 55.000 11.58 0.00 33.30 5.28
2131 5494 3.249687 GGCTATAATTCCTGGCCGG 57.750 57.895 3.88 3.88 33.30 6.13
2133 5496 0.960861 GGCGGCTATAATTCCTGGCC 60.961 60.000 0.00 0.00 39.43 5.36
2134 5497 0.960861 GGGCGGCTATAATTCCTGGC 60.961 60.000 9.56 0.00 0.00 4.85
2135 5498 0.400213 TGGGCGGCTATAATTCCTGG 59.600 55.000 9.56 0.00 0.00 4.45
2136 5499 2.496899 ATGGGCGGCTATAATTCCTG 57.503 50.000 5.89 0.00 0.00 3.86
2137 5500 2.910319 TGTATGGGCGGCTATAATTCCT 59.090 45.455 16.62 0.00 0.00 3.36
2138 5501 3.343941 TGTATGGGCGGCTATAATTCC 57.656 47.619 16.62 5.29 0.00 3.01
2139 5502 3.124636 CGTTGTATGGGCGGCTATAATTC 59.875 47.826 16.62 5.64 0.00 2.17
2140 5503 3.071479 CGTTGTATGGGCGGCTATAATT 58.929 45.455 16.62 0.00 0.00 1.40
2141 5504 2.300723 TCGTTGTATGGGCGGCTATAAT 59.699 45.455 16.62 4.63 0.00 1.28
2142 5505 1.687660 TCGTTGTATGGGCGGCTATAA 59.312 47.619 16.62 1.36 0.00 0.98
2143 5506 1.271379 CTCGTTGTATGGGCGGCTATA 59.729 52.381 11.11 11.11 0.00 1.31
2144 5507 0.033504 CTCGTTGTATGGGCGGCTAT 59.966 55.000 13.43 13.43 0.00 2.97
2145 5508 1.038681 TCTCGTTGTATGGGCGGCTA 61.039 55.000 9.56 1.93 0.00 3.93
2146 5509 1.895020 TTCTCGTTGTATGGGCGGCT 61.895 55.000 9.56 0.00 0.00 5.52
2147 5510 1.022451 TTTCTCGTTGTATGGGCGGC 61.022 55.000 0.00 0.00 0.00 6.53
2148 5511 1.444836 TTTTCTCGTTGTATGGGCGG 58.555 50.000 0.00 0.00 0.00 6.13
2169 5532 6.454795 TGCTGTTCTCAGTTTCTTTGTTTTT 58.545 32.000 0.00 0.00 43.05 1.94
2170 5533 6.024552 TGCTGTTCTCAGTTTCTTTGTTTT 57.975 33.333 0.00 0.00 43.05 2.43
2171 5534 5.415701 TCTGCTGTTCTCAGTTTCTTTGTTT 59.584 36.000 0.00 0.00 43.05 2.83
2172 5535 4.943705 TCTGCTGTTCTCAGTTTCTTTGTT 59.056 37.500 0.00 0.00 43.05 2.83
2173 5536 4.517285 TCTGCTGTTCTCAGTTTCTTTGT 58.483 39.130 0.00 0.00 43.05 2.83
2174 5537 5.686159 ATCTGCTGTTCTCAGTTTCTTTG 57.314 39.130 0.00 0.00 43.05 2.77
2175 5538 6.291377 TGTATCTGCTGTTCTCAGTTTCTTT 58.709 36.000 0.00 0.00 43.05 2.52
2176 5539 5.858381 TGTATCTGCTGTTCTCAGTTTCTT 58.142 37.500 0.00 0.00 43.05 2.52
2177 5540 5.474578 TGTATCTGCTGTTCTCAGTTTCT 57.525 39.130 0.00 0.00 43.05 2.52
2178 5541 5.121454 CCTTGTATCTGCTGTTCTCAGTTTC 59.879 44.000 0.00 0.00 43.05 2.78
2179 5542 4.999950 CCTTGTATCTGCTGTTCTCAGTTT 59.000 41.667 0.00 0.00 43.05 2.66
2180 5543 4.040952 ACCTTGTATCTGCTGTTCTCAGTT 59.959 41.667 0.00 0.00 43.05 3.16
2181 5544 3.580458 ACCTTGTATCTGCTGTTCTCAGT 59.420 43.478 0.00 0.00 43.05 3.41
2182 5545 3.931468 CACCTTGTATCTGCTGTTCTCAG 59.069 47.826 0.00 0.00 43.87 3.35
2183 5546 3.866066 GCACCTTGTATCTGCTGTTCTCA 60.866 47.826 0.00 0.00 0.00 3.27
2184 5547 2.675348 GCACCTTGTATCTGCTGTTCTC 59.325 50.000 0.00 0.00 0.00 2.87
2185 5548 2.304180 AGCACCTTGTATCTGCTGTTCT 59.696 45.455 0.00 0.00 39.82 3.01
2186 5549 2.704572 AGCACCTTGTATCTGCTGTTC 58.295 47.619 0.00 0.00 39.82 3.18
2187 5550 2.867109 AGCACCTTGTATCTGCTGTT 57.133 45.000 0.00 0.00 39.82 3.16
2188 5551 2.093447 GGTAGCACCTTGTATCTGCTGT 60.093 50.000 1.63 0.00 41.40 4.40
2189 5552 2.555199 GGTAGCACCTTGTATCTGCTG 58.445 52.381 1.63 0.00 41.40 4.41
2190 5553 1.137086 CGGTAGCACCTTGTATCTGCT 59.863 52.381 0.00 0.00 43.67 4.24
2191 5554 1.134788 ACGGTAGCACCTTGTATCTGC 60.135 52.381 4.21 0.00 35.66 4.26
2192 5555 2.961526 ACGGTAGCACCTTGTATCTG 57.038 50.000 4.21 0.00 35.66 2.90
2205 5568 2.943690 TGCTTCTAGACTGCTACGGTAG 59.056 50.000 10.83 10.83 0.00 3.18
2206 5569 2.681848 GTGCTTCTAGACTGCTACGGTA 59.318 50.000 15.31 0.00 0.00 4.02
2207 5570 1.473278 GTGCTTCTAGACTGCTACGGT 59.527 52.381 15.31 0.00 0.00 4.83
2208 5571 1.746220 AGTGCTTCTAGACTGCTACGG 59.254 52.381 15.31 0.00 0.00 4.02
2209 5572 3.374367 TGTAGTGCTTCTAGACTGCTACG 59.626 47.826 15.31 0.00 32.49 3.51
2210 5573 4.966965 TGTAGTGCTTCTAGACTGCTAC 57.033 45.455 15.31 13.73 0.00 3.58
2211 5574 4.765339 TGTTGTAGTGCTTCTAGACTGCTA 59.235 41.667 15.31 4.18 0.00 3.49
2212 5575 3.574396 TGTTGTAGTGCTTCTAGACTGCT 59.426 43.478 15.31 4.98 0.00 4.24
2213 5576 3.914312 TGTTGTAGTGCTTCTAGACTGC 58.086 45.455 9.32 9.32 0.00 4.40
2214 5577 5.378292 TCTGTTGTAGTGCTTCTAGACTG 57.622 43.478 0.00 0.00 0.00 3.51
2215 5578 6.406692 TTTCTGTTGTAGTGCTTCTAGACT 57.593 37.500 0.00 0.00 0.00 3.24
2216 5579 5.119434 GCTTTCTGTTGTAGTGCTTCTAGAC 59.881 44.000 0.00 0.00 0.00 2.59
2217 5580 5.221441 TGCTTTCTGTTGTAGTGCTTCTAGA 60.221 40.000 0.00 0.00 0.00 2.43
2218 5581 4.991056 TGCTTTCTGTTGTAGTGCTTCTAG 59.009 41.667 0.00 0.00 0.00 2.43
2219 5582 4.750098 GTGCTTTCTGTTGTAGTGCTTCTA 59.250 41.667 0.00 0.00 0.00 2.10
2220 5583 3.561725 GTGCTTTCTGTTGTAGTGCTTCT 59.438 43.478 0.00 0.00 0.00 2.85
2221 5584 3.312421 TGTGCTTTCTGTTGTAGTGCTTC 59.688 43.478 0.00 0.00 0.00 3.86
2222 5585 3.278574 TGTGCTTTCTGTTGTAGTGCTT 58.721 40.909 0.00 0.00 0.00 3.91
2223 5586 2.917933 TGTGCTTTCTGTTGTAGTGCT 58.082 42.857 0.00 0.00 0.00 4.40
2224 5587 3.691049 TTGTGCTTTCTGTTGTAGTGC 57.309 42.857 0.00 0.00 0.00 4.40
2225 5588 5.879237 TCTTTTGTGCTTTCTGTTGTAGTG 58.121 37.500 0.00 0.00 0.00 2.74
2226 5589 6.699575 ATCTTTTGTGCTTTCTGTTGTAGT 57.300 33.333 0.00 0.00 0.00 2.73
2227 5590 7.865707 AGTATCTTTTGTGCTTTCTGTTGTAG 58.134 34.615 0.00 0.00 0.00 2.74
2228 5591 7.801716 AGTATCTTTTGTGCTTTCTGTTGTA 57.198 32.000 0.00 0.00 0.00 2.41
2229 5592 6.699575 AGTATCTTTTGTGCTTTCTGTTGT 57.300 33.333 0.00 0.00 0.00 3.32
2230 5593 7.377928 CAGAAGTATCTTTTGTGCTTTCTGTTG 59.622 37.037 0.00 0.00 32.03 3.33
2231 5594 7.067494 ACAGAAGTATCTTTTGTGCTTTCTGTT 59.933 33.333 9.90 0.00 32.03 3.16
2232 5595 6.543831 ACAGAAGTATCTTTTGTGCTTTCTGT 59.456 34.615 9.90 9.90 32.03 3.41
2233 5596 6.854892 CACAGAAGTATCTTTTGTGCTTTCTG 59.145 38.462 16.12 8.79 32.03 3.02
2234 5597 6.543831 ACACAGAAGTATCTTTTGTGCTTTCT 59.456 34.615 23.39 9.04 32.89 2.52
2235 5598 6.729187 ACACAGAAGTATCTTTTGTGCTTTC 58.271 36.000 23.39 0.00 32.89 2.62
2236 5599 6.318648 TGACACAGAAGTATCTTTTGTGCTTT 59.681 34.615 23.39 11.39 32.89 3.51
2237 5600 5.822519 TGACACAGAAGTATCTTTTGTGCTT 59.177 36.000 23.39 11.91 32.89 3.91
2238 5601 5.237344 GTGACACAGAAGTATCTTTTGTGCT 59.763 40.000 23.39 15.12 32.89 4.40
2239 5602 5.237344 AGTGACACAGAAGTATCTTTTGTGC 59.763 40.000 23.39 18.36 32.89 4.57
2240 5603 6.851222 AGTGACACAGAAGTATCTTTTGTG 57.149 37.500 22.47 22.47 34.76 3.33
2241 5604 7.727181 AGTAGTGACACAGAAGTATCTTTTGT 58.273 34.615 8.59 0.86 33.78 2.83
2242 5605 7.061210 CGAGTAGTGACACAGAAGTATCTTTTG 59.939 40.741 8.59 0.00 32.03 2.44
2243 5606 7.040617 TCGAGTAGTGACACAGAAGTATCTTTT 60.041 37.037 8.59 0.00 32.03 2.27
2244 5607 6.430308 TCGAGTAGTGACACAGAAGTATCTTT 59.570 38.462 8.59 0.00 32.03 2.52
2245 5608 5.938710 TCGAGTAGTGACACAGAAGTATCTT 59.061 40.000 8.59 0.00 32.03 2.40
2246 5609 5.489249 TCGAGTAGTGACACAGAAGTATCT 58.511 41.667 8.59 0.00 35.88 1.98
2247 5610 5.798015 TCGAGTAGTGACACAGAAGTATC 57.202 43.478 8.59 0.00 0.00 2.24
2248 5611 5.392165 GCTTCGAGTAGTGACACAGAAGTAT 60.392 44.000 8.59 0.00 33.65 2.12
2249 5612 4.083431 GCTTCGAGTAGTGACACAGAAGTA 60.083 45.833 8.59 0.00 33.65 2.24
2250 5613 3.304794 GCTTCGAGTAGTGACACAGAAGT 60.305 47.826 8.59 0.00 33.65 3.01
2251 5614 3.057876 AGCTTCGAGTAGTGACACAGAAG 60.058 47.826 8.59 13.72 33.93 2.85
2252 5615 2.885266 AGCTTCGAGTAGTGACACAGAA 59.115 45.455 8.59 4.67 0.00 3.02
2284 5647 9.641770 CTGATCGCAGCTTTTCCTCAGAAAAAT 62.642 40.741 2.92 0.00 40.67 1.82
2290 5653 1.664659 CTGATCGCAGCTTTTCCTCAG 59.335 52.381 0.00 0.00 34.95 3.35
2300 5663 2.730404 CACTGATACATCTGATCGCAGC 59.270 50.000 3.43 0.00 42.01 5.25
2369 5733 3.004752 AGCCAGCGGTAAAAAGATGAT 57.995 42.857 0.00 0.00 0.00 2.45


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.