Multiple sequence alignment - TraesCS3A01G496400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G496400 chr3A 100.000 7751 0 0 1 7751 722274216 722281966 0.000000e+00 14314.0
1 TraesCS3A01G496400 chr3A 85.196 1709 192 30 5378 7083 11760910 11762560 0.000000e+00 1698.0
2 TraesCS3A01G496400 chr3A 91.134 485 32 5 6971 7448 325905140 325904660 0.000000e+00 647.0
3 TraesCS3A01G496400 chr3A 83.180 654 78 22 1005 1646 11758221 11758854 3.140000e-158 569.0
4 TraesCS3A01G496400 chr3A 82.923 568 76 13 4827 5381 11760293 11760852 6.990000e-135 492.0
5 TraesCS3A01G496400 chr3A 92.883 281 20 0 3039 3319 115159114 115158834 7.240000e-110 409.0
6 TraesCS3A01G496400 chr3A 100.000 32 0 0 6971 7002 325905176 325905145 8.400000e-05 60.2
7 TraesCS3A01G496400 chr3D 89.685 2666 193 52 4825 7460 591822962 591820349 0.000000e+00 3325.0
8 TraesCS3A01G496400 chr3D 83.360 3113 223 144 67 3027 591828223 591825254 0.000000e+00 2606.0
9 TraesCS3A01G496400 chr3D 85.413 1947 210 40 5396 7338 9418002 9416126 0.000000e+00 1954.0
10 TraesCS3A01G496400 chr3D 83.915 1977 239 46 5393 7358 5232923 5234831 0.000000e+00 1816.0
11 TraesCS3A01G496400 chr3D 92.118 406 27 4 4240 4644 591824194 591823793 1.130000e-157 568.0
12 TraesCS3A01G496400 chr3D 84.148 593 72 13 4823 5404 9418719 9418138 8.790000e-154 555.0
13 TraesCS3A01G496400 chr3D 81.368 687 79 29 1004 1664 9420184 9419521 1.490000e-141 514.0
14 TraesCS3A01G496400 chr3D 82.867 572 77 11 4823 5381 5232308 5232871 1.940000e-135 494.0
15 TraesCS3A01G496400 chr3D 81.442 652 75 25 1007 1642 5230797 5231418 6.990000e-135 492.0
16 TraesCS3A01G496400 chr3D 93.243 296 16 4 7458 7751 591819735 591819442 4.300000e-117 433.0
17 TraesCS3A01G496400 chr3D 82.555 407 56 9 1005 1396 5221975 5222381 2.070000e-90 344.0
18 TraesCS3A01G496400 chr3D 92.701 137 6 1 3395 3531 591825179 591825047 2.210000e-45 195.0
19 TraesCS3A01G496400 chr3D 87.097 124 10 4 3634 3753 591824990 591824869 1.360000e-27 135.0
20 TraesCS3A01G496400 chr3B 89.301 2645 190 51 4823 7407 792861397 792864008 0.000000e+00 3230.0
21 TraesCS3A01G496400 chr3B 83.771 1978 234 36 5378 7338 28316487 28314580 0.000000e+00 1794.0
22 TraesCS3A01G496400 chr3B 81.524 1759 149 75 81 1747 792857162 792858836 0.000000e+00 1286.0
23 TraesCS3A01G496400 chr3B 82.799 1186 143 25 6171 7338 13506682 13505540 0.000000e+00 1003.0
24 TraesCS3A01G496400 chr3B 82.447 809 84 25 1833 2629 792858884 792859646 0.000000e+00 654.0
25 TraesCS3A01G496400 chr3B 86.828 577 64 6 5523 6099 13508687 13508123 1.100000e-177 634.0
26 TraesCS3A01G496400 chr3B 81.022 685 71 29 1005 1656 28318936 28318278 2.510000e-134 490.0
27 TraesCS3A01G496400 chr3B 82.480 508 77 6 4883 5381 28317049 28316545 1.190000e-117 435.0
28 TraesCS3A01G496400 chr3B 85.316 395 43 5 1024 1403 13509678 13509284 2.030000e-105 394.0
29 TraesCS3A01G496400 chr3B 87.745 204 17 5 4625 4822 792861153 792861354 1.680000e-56 231.0
30 TraesCS3A01G496400 chr3B 79.481 385 29 26 3384 3757 792860139 792860484 2.180000e-55 228.0
31 TraesCS3A01G496400 chr3B 78.777 278 18 21 2632 2894 792859753 792860004 1.740000e-31 148.0
32 TraesCS3A01G496400 chrUn 82.595 2574 332 64 4823 7358 36511581 36514076 0.000000e+00 2165.0
33 TraesCS3A01G496400 chrUn 83.516 455 48 10 1005 1438 36508197 36508645 4.360000e-107 399.0
34 TraesCS3A01G496400 chrUn 90.345 290 28 0 3040 3329 231014488 231014777 1.580000e-101 381.0
35 TraesCS3A01G496400 chr4A 90.543 497 33 7 6962 7448 686150639 686151131 0.000000e+00 645.0
36 TraesCS3A01G496400 chr5A 90.188 479 36 5 6977 7448 568455442 568454968 1.430000e-171 614.0
37 TraesCS3A01G496400 chr5A 89.346 413 33 6 7043 7448 499134028 499134436 6.940000e-140 508.0
38 TraesCS3A01G496400 chr5A 90.909 286 24 2 3041 3326 577906018 577905735 4.390000e-102 383.0
39 TraesCS3A01G496400 chr2A 91.351 370 29 1 7082 7448 382402971 382403340 3.230000e-138 503.0
40 TraesCS3A01G496400 chr2A 90.909 286 25 1 3039 3323 733094647 733094932 4.390000e-102 383.0
41 TraesCS3A01G496400 chr7A 92.419 277 21 0 3041 3317 439154302 439154578 5.640000e-106 396.0
42 TraesCS3A01G496400 chr7A 83.654 104 17 0 1539 1642 571940122 571940019 1.780000e-16 99.0
43 TraesCS3A01G496400 chr6A 91.844 282 21 2 3043 3322 544677875 544677594 7.290000e-105 392.0
44 TraesCS3A01G496400 chr6A 92.029 276 21 1 3046 3321 600129607 600129881 3.390000e-103 387.0
45 TraesCS3A01G496400 chr6A 79.600 250 47 3 4919 5166 176982805 176983052 7.990000e-40 176.0
46 TraesCS3A01G496400 chr1A 92.364 275 21 0 3043 3317 130154697 130154423 7.290000e-105 392.0
47 TraesCS3A01G496400 chr7B 91.429 280 24 0 3040 3319 616541318 616541039 1.220000e-102 385.0
48 TraesCS3A01G496400 chr7B 80.000 110 16 6 1525 1631 745143442 745143548 8.340000e-10 76.8
49 TraesCS3A01G496400 chr6B 80.000 250 46 3 4919 5166 234151738 234151985 1.720000e-41 182.0
50 TraesCS3A01G496400 chr6D 80.702 228 40 3 4919 5144 135428788 135429013 2.870000e-39 174.0
51 TraesCS3A01G496400 chr7D 82.692 104 18 0 1539 1642 504254445 504254342 8.280000e-15 93.5
52 TraesCS3A01G496400 chr7D 80.000 110 16 6 1525 1631 632162703 632162809 8.340000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G496400 chr3A 722274216 722281966 7750 False 14314.000000 14314 100.000000 1 7751 1 chr3A.!!$F1 7750
1 TraesCS3A01G496400 chr3A 11758221 11762560 4339 False 919.666667 1698 83.766333 1005 7083 3 chr3A.!!$F2 6078
2 TraesCS3A01G496400 chr3A 325904660 325905176 516 True 353.600000 647 95.567000 6971 7448 2 chr3A.!!$R2 477
3 TraesCS3A01G496400 chr3D 591819442 591828223 8781 True 1210.333333 3325 89.700667 67 7751 6 chr3D.!!$R2 7684
4 TraesCS3A01G496400 chr3D 9416126 9420184 4058 True 1007.666667 1954 83.643000 1004 7338 3 chr3D.!!$R1 6334
5 TraesCS3A01G496400 chr3D 5230797 5234831 4034 False 934.000000 1816 82.741333 1007 7358 3 chr3D.!!$F2 6351
6 TraesCS3A01G496400 chr3B 792857162 792864008 6846 False 962.833333 3230 83.212500 81 7407 6 chr3B.!!$F1 7326
7 TraesCS3A01G496400 chr3B 28314580 28318936 4356 True 906.333333 1794 82.424333 1005 7338 3 chr3B.!!$R2 6333
8 TraesCS3A01G496400 chr3B 13505540 13509678 4138 True 677.000000 1003 84.981000 1024 7338 3 chr3B.!!$R1 6314
9 TraesCS3A01G496400 chrUn 36508197 36514076 5879 False 1282.000000 2165 83.055500 1005 7358 2 chrUn.!!$F2 6353

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
869 969 0.034380 TACTCCTCCCTCAGTCCACG 60.034 60.000 0.00 0.00 0.00 4.94 F
1794 2419 0.036732 TCCGTCCCACTACTGTACGT 59.963 55.000 0.00 0.00 31.87 3.57 F
2342 3225 0.038435 TGCACACAATCAATTGCCCG 60.038 50.000 0.00 0.00 41.38 6.13 F
3577 5601 0.031178 CTGGCTCAACGCTTTTGCTT 59.969 50.000 0.00 0.00 44.80 3.91 F
3578 5602 0.248990 TGGCTCAACGCTTTTGCTTG 60.249 50.000 0.00 0.00 44.80 4.01 F
3579 5603 0.249031 GGCTCAACGCTTTTGCTTGT 60.249 50.000 0.00 0.00 44.80 3.16 F
4640 7422 0.588252 GTGATATGGCCGTGTGCATC 59.412 55.000 8.05 2.87 43.89 3.91 F
4655 7437 1.070445 CATCCCCCGATGCAGAGAC 59.930 63.158 0.00 0.00 39.59 3.36 F
5858 9591 0.250513 GAGGACTCATCACCACCCAC 59.749 60.000 0.00 0.00 0.00 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2650 3558 0.035439 ACGTGAGGCCATTAACCCTG 60.035 55.0 5.01 0.00 0.00 4.45 R
2768 3784 0.606401 CGGGGCATAGCATTTCCGAT 60.606 55.0 0.00 0.00 39.83 4.18 R
4341 7122 0.179029 AACACTAAACTGCCAGCCGT 60.179 50.0 0.00 0.00 0.00 5.68 R
4484 7266 0.331278 ATCTGGCGACCATTTCCCAA 59.669 50.0 0.00 0.00 30.82 4.12 R
4560 7342 0.693049 TTCTCCTTGAGGGTTGGAGC 59.307 55.0 0.00 0.00 45.04 4.70 R
5460 9167 1.122019 ATATCCTCCAGACACCGGCC 61.122 60.0 0.00 0.00 0.00 6.13 R
5759 9488 0.751643 ACAGGTTTGCAGGTCCACAC 60.752 55.0 6.65 0.00 0.00 3.82 R
6340 11458 1.327690 ATGCTTCCATGGCTGGCTTG 61.328 55.0 6.96 9.74 42.80 4.01 R
6789 11917 0.030504 TTGCACGCCATTTGTCACTG 59.969 50.0 0.00 0.00 0.00 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
55 56 4.668118 GGTCGGACGCGGTGGAAA 62.668 66.667 12.47 0.00 0.00 3.13
56 57 3.110178 GTCGGACGCGGTGGAAAG 61.110 66.667 12.47 0.00 0.00 2.62
59 60 4.699522 GGACGCGGTGGAAAGCCT 62.700 66.667 12.47 0.00 34.31 4.58
60 61 3.423154 GACGCGGTGGAAAGCCTG 61.423 66.667 12.47 0.00 34.31 4.85
61 62 4.250305 ACGCGGTGGAAAGCCTGT 62.250 61.111 12.47 0.00 34.31 4.00
62 63 3.726517 CGCGGTGGAAAGCCTGTG 61.727 66.667 0.00 0.00 34.31 3.66
63 64 4.043200 GCGGTGGAAAGCCTGTGC 62.043 66.667 0.00 0.00 37.95 4.57
64 65 2.594303 CGGTGGAAAGCCTGTGCA 60.594 61.111 0.00 0.00 41.13 4.57
65 66 2.620112 CGGTGGAAAGCCTGTGCAG 61.620 63.158 0.00 0.00 41.13 4.41
66 67 1.228245 GGTGGAAAGCCTGTGCAGA 60.228 57.895 0.02 0.00 41.13 4.26
67 68 0.823356 GGTGGAAAGCCTGTGCAGAA 60.823 55.000 0.02 0.00 41.13 3.02
68 69 0.595095 GTGGAAAGCCTGTGCAGAAG 59.405 55.000 0.02 0.00 41.13 2.85
69 70 0.473755 TGGAAAGCCTGTGCAGAAGA 59.526 50.000 0.02 0.00 41.13 2.87
70 71 1.133823 TGGAAAGCCTGTGCAGAAGAA 60.134 47.619 0.02 0.00 41.13 2.52
74 75 1.889545 AGCCTGTGCAGAAGAAAGAC 58.110 50.000 0.02 0.00 41.13 3.01
75 76 0.514691 GCCTGTGCAGAAGAAAGACG 59.485 55.000 0.02 0.00 37.47 4.18
78 79 1.795286 CTGTGCAGAAGAAAGACGGAC 59.205 52.381 0.00 0.00 0.00 4.79
86 87 4.446051 CAGAAGAAAGACGGACAGAAAGTC 59.554 45.833 0.00 0.00 46.83 3.01
100 101 0.755327 AAAGTCCACACCCCAACAGC 60.755 55.000 0.00 0.00 0.00 4.40
191 198 1.608717 CCACGCCTGCCTAGAGAAGT 61.609 60.000 0.00 0.00 0.00 3.01
294 311 0.040067 CAAAACAAGGACGCTGGAGC 60.040 55.000 0.00 0.00 37.78 4.70
399 434 4.028490 GGCCCGACCACATGGACA 62.028 66.667 4.53 0.00 38.86 4.02
400 435 2.272146 GCCCGACCACATGGACAT 59.728 61.111 4.53 0.00 38.94 3.06
401 436 2.114670 GCCCGACCACATGGACATG 61.115 63.158 10.57 10.57 44.15 3.21
402 437 1.451927 CCCGACCACATGGACATGG 60.452 63.158 15.94 4.02 42.91 3.66
403 438 2.114670 CCGACCACATGGACATGGC 61.115 63.158 15.94 0.00 42.91 4.40
404 439 1.078214 CGACCACATGGACATGGCT 60.078 57.895 15.94 0.00 42.91 4.75
405 440 1.371337 CGACCACATGGACATGGCTG 61.371 60.000 15.94 6.59 42.91 4.85
456 491 1.269998 ACTCTTGCTGACTCGTACACC 59.730 52.381 0.00 0.00 0.00 4.16
512 547 7.178274 TGTCACCGTAGTACCTTTTCCTTTATA 59.822 37.037 0.00 0.00 0.00 0.98
543 582 7.049133 TGTATACACCAATAATACACACACCC 58.951 38.462 0.08 0.00 32.57 4.61
557 596 1.146544 ACACCCAGTGGCCCCTAAAT 61.147 55.000 2.61 0.00 37.94 1.40
585 624 3.502211 CGGAATGGACCAATAATAGCACC 59.498 47.826 0.00 0.00 0.00 5.01
623 662 3.185246 CTTGGACACTCACAAGTCAGT 57.815 47.619 0.00 0.00 39.30 3.41
654 706 0.397535 ACATTCCCATGCACCCATCC 60.398 55.000 0.00 0.00 33.05 3.51
655 707 0.397394 CATTCCCATGCACCCATCCA 60.397 55.000 0.00 0.00 0.00 3.41
656 708 0.339162 ATTCCCATGCACCCATCCAA 59.661 50.000 0.00 0.00 0.00 3.53
657 709 0.614415 TTCCCATGCACCCATCCAAC 60.614 55.000 0.00 0.00 0.00 3.77
678 730 0.321564 CATCTCACCAACCGCCAGAA 60.322 55.000 0.00 0.00 0.00 3.02
679 731 0.321653 ATCTCACCAACCGCCAGAAC 60.322 55.000 0.00 0.00 0.00 3.01
680 732 1.071471 CTCACCAACCGCCAGAACT 59.929 57.895 0.00 0.00 0.00 3.01
682 734 1.227823 CACCAACCGCCAGAACTCA 60.228 57.895 0.00 0.00 0.00 3.41
683 735 0.606401 CACCAACCGCCAGAACTCAT 60.606 55.000 0.00 0.00 0.00 2.90
690 758 1.291184 CGCCAGAACTCATCACGCAA 61.291 55.000 0.00 0.00 0.00 4.85
722 790 1.242076 GGCATGCATCTACATCCCAC 58.758 55.000 21.36 0.00 27.43 4.61
794 874 0.902531 CCATCTGACCCGTAACCACT 59.097 55.000 0.00 0.00 0.00 4.00
828 928 4.148825 ACCCATCGCTCACTCGCC 62.149 66.667 0.00 0.00 0.00 5.54
829 929 4.147449 CCCATCGCTCACTCGCCA 62.147 66.667 0.00 0.00 0.00 5.69
830 930 2.107750 CCATCGCTCACTCGCCAT 59.892 61.111 0.00 0.00 0.00 4.40
831 931 2.242572 CCATCGCTCACTCGCCATG 61.243 63.158 0.00 0.00 0.00 3.66
832 932 1.520120 CATCGCTCACTCGCCATGT 60.520 57.895 0.00 0.00 0.00 3.21
833 933 1.520120 ATCGCTCACTCGCCATGTG 60.520 57.895 0.00 0.00 36.82 3.21
834 934 3.857854 CGCTCACTCGCCATGTGC 61.858 66.667 0.00 0.00 35.58 4.57
835 935 3.503363 GCTCACTCGCCATGTGCC 61.503 66.667 0.00 0.00 36.24 5.01
836 936 3.190849 CTCACTCGCCATGTGCCG 61.191 66.667 0.00 0.00 36.24 5.69
837 937 3.647649 CTCACTCGCCATGTGCCGA 62.648 63.158 0.00 0.00 36.24 5.54
838 938 2.512286 CACTCGCCATGTGCCGAT 60.512 61.111 0.00 0.00 36.24 4.18
839 939 2.202932 ACTCGCCATGTGCCGATC 60.203 61.111 0.00 0.00 36.24 3.69
840 940 2.202919 CTCGCCATGTGCCGATCA 60.203 61.111 0.00 0.00 36.24 2.92
841 941 1.815003 CTCGCCATGTGCCGATCAA 60.815 57.895 0.00 0.00 36.24 2.57
843 943 2.404789 GCCATGTGCCGATCAACG 59.595 61.111 0.00 0.00 42.18 4.10
845 945 2.021793 CATGTGCCGATCAACGCG 59.978 61.111 3.53 3.53 41.07 6.01
846 946 3.864686 ATGTGCCGATCAACGCGC 61.865 61.111 5.73 0.00 41.07 6.86
851 951 2.277692 CCGATCAACGCGCGTCTA 60.278 61.111 37.77 26.74 41.07 2.59
852 952 2.565394 CCGATCAACGCGCGTCTAC 61.565 63.158 37.77 24.33 41.07 2.59
856 956 1.654954 ATCAACGCGCGTCTACTCCT 61.655 55.000 37.77 16.50 0.00 3.69
858 958 3.048941 AACGCGCGTCTACTCCTCC 62.049 63.158 37.77 0.00 0.00 4.30
859 959 4.253257 CGCGCGTCTACTCCTCCC 62.253 72.222 24.19 0.00 0.00 4.30
860 960 2.829458 GCGCGTCTACTCCTCCCT 60.829 66.667 8.43 0.00 0.00 4.20
861 961 2.836793 GCGCGTCTACTCCTCCCTC 61.837 68.421 8.43 0.00 0.00 4.30
862 962 1.451567 CGCGTCTACTCCTCCCTCA 60.452 63.158 0.00 0.00 0.00 3.86
863 963 1.440938 CGCGTCTACTCCTCCCTCAG 61.441 65.000 0.00 0.00 0.00 3.35
864 964 0.394625 GCGTCTACTCCTCCCTCAGT 60.395 60.000 0.00 0.00 0.00 3.41
865 965 1.670791 CGTCTACTCCTCCCTCAGTC 58.329 60.000 0.00 0.00 0.00 3.51
866 966 1.747898 CGTCTACTCCTCCCTCAGTCC 60.748 61.905 0.00 0.00 0.00 3.85
867 967 1.285373 GTCTACTCCTCCCTCAGTCCA 59.715 57.143 0.00 0.00 0.00 4.02
868 968 1.285373 TCTACTCCTCCCTCAGTCCAC 59.715 57.143 0.00 0.00 0.00 4.02
869 969 0.034380 TACTCCTCCCTCAGTCCACG 60.034 60.000 0.00 0.00 0.00 4.94
870 970 2.680352 TCCTCCCTCAGTCCACGC 60.680 66.667 0.00 0.00 0.00 5.34
871 971 3.775654 CCTCCCTCAGTCCACGCC 61.776 72.222 0.00 0.00 0.00 5.68
872 972 4.135153 CTCCCTCAGTCCACGCCG 62.135 72.222 0.00 0.00 0.00 6.46
915 1015 2.599139 ATCCACCTACCTAGCCCGCA 62.599 60.000 0.00 0.00 0.00 5.69
981 1097 3.142393 CTAGATCCAGCCACCCGG 58.858 66.667 0.00 0.00 0.00 5.73
1030 1156 2.125512 GCGAGGAGTTCATGGCGT 60.126 61.111 0.00 0.00 0.00 5.68
1033 1159 1.519455 GAGGAGTTCATGGCGTCGG 60.519 63.158 0.00 0.00 0.00 4.79
1168 1306 2.917227 TGCTGGTCCTGTCGCTGA 60.917 61.111 0.00 0.00 0.00 4.26
1403 1562 2.039624 GGTGAGCTCCTCCTCCCA 59.960 66.667 12.15 0.00 0.00 4.37
1404 1563 1.383803 GGTGAGCTCCTCCTCCCAT 60.384 63.158 12.15 0.00 0.00 4.00
1422 1581 2.133553 CATCATCCTAGTGCTTGCTCG 58.866 52.381 0.00 0.00 0.00 5.03
1423 1582 0.179100 TCATCCTAGTGCTTGCTCGC 60.179 55.000 0.00 0.00 0.00 5.03
1427 1586 0.741326 CCTAGTGCTTGCTCGCTAGA 59.259 55.000 17.32 0.00 45.35 2.43
1433 1615 3.120060 AGTGCTTGCTCGCTAGAAAAATG 60.120 43.478 4.58 0.00 0.00 2.32
1470 1652 2.899838 CGGTGGTGTGGTGTGGTG 60.900 66.667 0.00 0.00 0.00 4.17
1497 1686 8.925700 GGATTTGTTTACTGATTTGTTTGGATC 58.074 33.333 0.00 0.00 0.00 3.36
1503 1700 3.888930 ACTGATTTGTTTGGATCGGTGTT 59.111 39.130 0.00 0.00 39.69 3.32
1518 1715 1.339631 GGTGTTGTTGGATCGGATGGA 60.340 52.381 0.00 0.00 0.00 3.41
1519 1716 2.643551 GTGTTGTTGGATCGGATGGAT 58.356 47.619 0.00 0.00 38.35 3.41
1520 1717 2.355756 GTGTTGTTGGATCGGATGGATG 59.644 50.000 0.00 0.00 34.82 3.51
1524 1721 1.142870 GTTGGATCGGATGGATGGGAA 59.857 52.381 0.00 0.00 34.82 3.97
1525 1722 1.746157 TGGATCGGATGGATGGGAAT 58.254 50.000 0.00 0.00 34.82 3.01
1646 1843 1.469767 CCCCGCTGTAAAGGTACGTAC 60.470 57.143 17.56 17.56 32.40 3.67
1671 1878 2.822637 AATCCATCCATCCGCCGCT 61.823 57.895 0.00 0.00 0.00 5.52
1779 2404 0.602905 CGCTCCTTGGTTTTCTCCGT 60.603 55.000 0.00 0.00 0.00 4.69
1782 2407 0.399075 TCCTTGGTTTTCTCCGTCCC 59.601 55.000 0.00 0.00 0.00 4.46
1783 2408 0.109723 CCTTGGTTTTCTCCGTCCCA 59.890 55.000 0.00 0.00 0.00 4.37
1784 2409 1.235724 CTTGGTTTTCTCCGTCCCAC 58.764 55.000 0.00 0.00 0.00 4.61
1785 2410 0.841289 TTGGTTTTCTCCGTCCCACT 59.159 50.000 0.00 0.00 0.00 4.00
1786 2411 1.719529 TGGTTTTCTCCGTCCCACTA 58.280 50.000 0.00 0.00 0.00 2.74
1787 2412 1.345415 TGGTTTTCTCCGTCCCACTAC 59.655 52.381 0.00 0.00 0.00 2.73
1788 2413 1.622312 GGTTTTCTCCGTCCCACTACT 59.378 52.381 0.00 0.00 0.00 2.57
1789 2414 2.612221 GGTTTTCTCCGTCCCACTACTG 60.612 54.545 0.00 0.00 0.00 2.74
1790 2415 2.005370 TTTCTCCGTCCCACTACTGT 57.995 50.000 0.00 0.00 0.00 3.55
1791 2416 2.885135 TTCTCCGTCCCACTACTGTA 57.115 50.000 0.00 0.00 0.00 2.74
1792 2417 2.119801 TCTCCGTCCCACTACTGTAC 57.880 55.000 0.00 0.00 0.00 2.90
1793 2418 0.731417 CTCCGTCCCACTACTGTACG 59.269 60.000 0.00 0.00 0.00 3.67
1794 2419 0.036732 TCCGTCCCACTACTGTACGT 59.963 55.000 0.00 0.00 31.87 3.57
1795 2420 1.277842 TCCGTCCCACTACTGTACGTA 59.722 52.381 0.00 0.00 31.87 3.57
1796 2421 1.398390 CCGTCCCACTACTGTACGTAC 59.602 57.143 18.90 18.90 31.87 3.67
1797 2422 2.350522 CGTCCCACTACTGTACGTACT 58.649 52.381 25.12 9.79 0.00 2.73
1798 2423 3.521560 CGTCCCACTACTGTACGTACTA 58.478 50.000 25.12 10.41 0.00 1.82
1816 2441 6.927381 ACGTACTAGTACATGCATAATTTCCC 59.073 38.462 28.03 0.73 35.87 3.97
1817 2442 7.152645 CGTACTAGTACATGCATAATTTCCCT 58.847 38.462 28.03 0.00 35.87 4.20
1819 2444 6.534634 ACTAGTACATGCATAATTTCCCTCC 58.465 40.000 0.00 0.00 0.00 4.30
1820 2445 4.729868 AGTACATGCATAATTTCCCTCCC 58.270 43.478 0.00 0.00 0.00 4.30
1823 2448 1.619298 TGCATAATTTCCCTCCCCCT 58.381 50.000 0.00 0.00 0.00 4.79
1824 2449 1.217689 TGCATAATTTCCCTCCCCCTG 59.782 52.381 0.00 0.00 0.00 4.45
1825 2450 1.217942 GCATAATTTCCCTCCCCCTGT 59.782 52.381 0.00 0.00 0.00 4.00
1826 2451 2.949447 CATAATTTCCCTCCCCCTGTG 58.051 52.381 0.00 0.00 0.00 3.66
1827 2452 2.068831 TAATTTCCCTCCCCCTGTGT 57.931 50.000 0.00 0.00 0.00 3.72
1829 2454 1.509548 ATTTCCCTCCCCCTGTGTGG 61.510 60.000 0.00 0.00 0.00 4.17
1909 2545 0.602638 CAGGCACCACGTACACACAT 60.603 55.000 0.00 0.00 0.00 3.21
1915 2551 2.473609 CACCACGTACACACATACACAC 59.526 50.000 0.00 0.00 0.00 3.82
1916 2552 2.101082 ACCACGTACACACATACACACA 59.899 45.455 0.00 0.00 0.00 3.72
1919 2555 3.181575 CACGTACACACATACACACACAG 59.818 47.826 0.00 0.00 0.00 3.66
1933 2569 2.034879 CACAGACGGGTGACATGGC 61.035 63.158 0.00 0.00 41.32 4.40
1993 2638 1.134965 TGGTTTTGTTCGCAACTTGGG 60.135 47.619 0.00 0.00 36.74 4.12
1994 2639 1.566404 GTTTTGTTCGCAACTTGGGG 58.434 50.000 6.03 0.00 36.74 4.96
1995 2640 1.135333 GTTTTGTTCGCAACTTGGGGA 59.865 47.619 6.03 0.00 36.74 4.81
1996 2641 0.741915 TTTGTTCGCAACTTGGGGAC 59.258 50.000 9.82 9.82 39.09 4.46
1997 2642 0.106918 TTGTTCGCAACTTGGGGACT 60.107 50.000 16.14 0.00 39.34 3.85
2043 2690 2.809446 CGTGATAAGTGCGGATGAAGA 58.191 47.619 0.00 0.00 0.00 2.87
2096 2743 2.926779 AGAGCCAGCCAGTGAGCA 60.927 61.111 6.40 0.00 34.23 4.26
2156 2811 7.283354 GCATAAAGCTAGGTGAAAACTATTCCT 59.717 37.037 0.00 0.00 41.15 3.36
2338 3221 3.715618 GCATGTGCACACAATCAATTG 57.284 42.857 24.37 14.92 45.41 2.32
2340 3223 2.151881 TGTGCACACAATCAATTGCC 57.848 45.000 17.42 0.00 41.38 4.52
2341 3224 1.270199 TGTGCACACAATCAATTGCCC 60.270 47.619 17.42 0.00 41.38 5.36
2342 3225 0.038435 TGCACACAATCAATTGCCCG 60.038 50.000 0.00 0.00 41.38 6.13
2345 3228 1.516821 CACAATCAATTGCCCGGCG 60.517 57.895 4.58 0.00 41.38 6.46
2346 3229 2.104729 CAATCAATTGCCCGGCGG 59.895 61.111 21.46 21.46 0.00 6.13
2373 3258 2.823593 CATCCCGTTGCCATGCGA 60.824 61.111 0.00 0.00 0.00 5.10
2380 3265 1.699656 CGTTGCCATGCGAGAAGAGG 61.700 60.000 0.00 0.00 0.00 3.69
2517 3406 1.001624 GCCGATGGTTTGTACGTACC 58.998 55.000 22.43 10.76 34.93 3.34
2518 3407 1.643880 CCGATGGTTTGTACGTACCC 58.356 55.000 22.43 16.40 33.34 3.69
2519 3408 1.067000 CCGATGGTTTGTACGTACCCA 60.067 52.381 22.43 21.10 33.34 4.51
2520 3409 1.994779 CGATGGTTTGTACGTACCCAC 59.005 52.381 22.43 17.41 33.34 4.61
2523 3412 3.940209 TGGTTTGTACGTACCCACTAG 57.060 47.619 22.43 0.00 33.34 2.57
2533 3422 3.262915 ACGTACCCACTAGTCACTACTCT 59.737 47.826 0.00 0.00 37.15 3.24
2558 3464 2.587194 CCGCTCCGGCTGATCTTG 60.587 66.667 0.00 0.00 41.17 3.02
2559 3465 3.267860 CGCTCCGGCTGATCTTGC 61.268 66.667 0.00 0.00 36.09 4.01
2572 3478 4.498682 GCTGATCTTGCCATTTATTTCGCT 60.499 41.667 0.00 0.00 0.00 4.93
2573 3479 5.277974 GCTGATCTTGCCATTTATTTCGCTA 60.278 40.000 0.00 0.00 0.00 4.26
2576 3482 7.806690 TGATCTTGCCATTTATTTCGCTATAC 58.193 34.615 0.00 0.00 0.00 1.47
2625 3533 7.339466 ACCGAATTAGCAAGTTTTATTCCTCAT 59.661 33.333 0.00 0.00 0.00 2.90
2665 3672 1.844497 AGTACCAGGGTTAATGGCCTC 59.156 52.381 3.32 0.00 41.87 4.70
2677 3684 1.532078 TGGCCTCACGTACAGGTCA 60.532 57.895 14.56 14.56 43.67 4.02
2678 3685 0.902984 TGGCCTCACGTACAGGTCAT 60.903 55.000 14.56 0.00 40.90 3.06
2679 3686 0.179108 GGCCTCACGTACAGGTCATC 60.179 60.000 11.59 0.00 35.50 2.92
2680 3687 0.530744 GCCTCACGTACAGGTCATCA 59.469 55.000 13.04 0.00 32.98 3.07
2681 3688 1.137086 GCCTCACGTACAGGTCATCAT 59.863 52.381 13.04 0.00 32.98 2.45
2682 3689 2.814269 CCTCACGTACAGGTCATCATG 58.186 52.381 4.79 0.00 0.00 3.07
2683 3690 2.481969 CCTCACGTACAGGTCATCATGG 60.482 54.545 4.79 0.00 0.00 3.66
2684 3691 1.134818 TCACGTACAGGTCATCATGGC 60.135 52.381 0.00 0.00 0.00 4.40
2685 3692 0.178068 ACGTACAGGTCATCATGGCC 59.822 55.000 0.00 0.00 44.07 5.36
2696 3703 3.758715 TCATGGCCTATGACACACG 57.241 52.632 3.32 0.00 40.82 4.49
2704 3711 5.775686 TGGCCTATGACACACGTATTATAC 58.224 41.667 3.32 0.00 0.00 1.47
2708 3715 7.022384 GCCTATGACACACGTATTATACTCTC 58.978 42.308 0.69 0.00 0.00 3.20
2728 3736 4.721776 TCTCTTTTGGCATGATACTACCCT 59.278 41.667 0.00 0.00 0.00 4.34
2735 3743 2.029020 GCATGATACTACCCTGCATCGA 60.029 50.000 0.00 0.00 33.13 3.59
2768 3784 1.826096 CACATGTTCCCAATCATGCCA 59.174 47.619 0.00 0.00 43.34 4.92
2772 3788 0.670162 GTTCCCAATCATGCCATCGG 59.330 55.000 0.00 0.00 0.00 4.18
2784 3800 0.242017 GCCATCGGAAATGCTATGCC 59.758 55.000 0.00 0.00 0.00 4.40
2785 3801 0.883833 CCATCGGAAATGCTATGCCC 59.116 55.000 0.00 0.00 0.00 5.36
2786 3802 0.883833 CATCGGAAATGCTATGCCCC 59.116 55.000 0.00 0.00 0.00 5.80
2787 3803 0.606401 ATCGGAAATGCTATGCCCCG 60.606 55.000 0.00 0.00 38.41 5.73
2788 3804 1.227823 CGGAAATGCTATGCCCCGA 60.228 57.895 0.00 0.00 39.31 5.14
2789 3805 1.507141 CGGAAATGCTATGCCCCGAC 61.507 60.000 0.00 0.00 39.31 4.79
2790 3806 1.507141 GGAAATGCTATGCCCCGACG 61.507 60.000 0.00 0.00 0.00 5.12
2791 3807 1.507141 GAAATGCTATGCCCCGACGG 61.507 60.000 6.99 6.99 0.00 4.79
2829 3861 9.603189 ACTAACTTAGAATATATACCTGGTGCT 57.397 33.333 10.23 0.00 0.00 4.40
2830 3862 9.862371 CTAACTTAGAATATATACCTGGTGCTG 57.138 37.037 10.23 0.00 0.00 4.41
2831 3863 7.246171 ACTTAGAATATATACCTGGTGCTGG 57.754 40.000 10.23 0.00 0.00 4.85
2832 3864 6.787957 ACTTAGAATATATACCTGGTGCTGGT 59.212 38.462 10.23 0.00 39.06 4.00
2833 3865 5.489792 AGAATATATACCTGGTGCTGGTG 57.510 43.478 10.23 0.00 36.40 4.17
2892 3924 1.345415 ACACTGGGTTAGGTTACGTGG 59.655 52.381 0.00 0.00 0.00 4.94
2893 3925 0.322648 ACTGGGTTAGGTTACGTGGC 59.677 55.000 0.00 0.00 0.00 5.01
2894 3926 0.611714 CTGGGTTAGGTTACGTGGCT 59.388 55.000 0.00 0.00 0.00 4.75
2918 3987 5.528690 TCACTGGATCCAAATTTGATCGATC 59.471 40.000 19.86 18.72 0.00 3.69
2927 3996 5.163764 CCAAATTTGATCGATCGAGGAAACA 60.164 40.000 23.84 14.15 0.00 2.83
2943 4012 5.819991 AGGAAACACTGATAATGACACCAT 58.180 37.500 0.00 0.00 33.66 3.55
2945 4014 5.882557 GGAAACACTGATAATGACACCATCT 59.117 40.000 0.00 0.00 31.40 2.90
2954 4023 1.485124 TGACACCATCTCCGTAGCAT 58.515 50.000 0.00 0.00 0.00 3.79
3002 4076 0.321653 ACGTGGGAGCACCTTGATTC 60.322 55.000 0.00 0.00 41.11 2.52
3024 4098 0.472925 TGGCAAGTGGTAGGGTCAGA 60.473 55.000 0.00 0.00 0.00 3.27
3027 4101 1.608283 GCAAGTGGTAGGGTCAGACAC 60.608 57.143 2.17 0.00 0.00 3.67
3049 4123 6.642707 ACCATGAGTGAGTATAAGACTAGC 57.357 41.667 0.00 0.00 39.06 3.42
3050 4124 5.536916 ACCATGAGTGAGTATAAGACTAGCC 59.463 44.000 0.00 0.00 39.06 3.93
3053 4127 5.506708 TGAGTGAGTATAAGACTAGCCACA 58.493 41.667 0.00 0.00 39.06 4.17
3054 4128 5.590663 TGAGTGAGTATAAGACTAGCCACAG 59.409 44.000 0.00 0.00 39.06 3.66
3055 4129 5.511363 AGTGAGTATAAGACTAGCCACAGT 58.489 41.667 0.00 0.00 39.06 3.55
3056 4130 5.358442 AGTGAGTATAAGACTAGCCACAGTG 59.642 44.000 0.00 0.00 39.06 3.66
3057 4131 5.357314 GTGAGTATAAGACTAGCCACAGTGA 59.643 44.000 0.62 0.00 39.06 3.41
3058 4132 5.949952 TGAGTATAAGACTAGCCACAGTGAA 59.050 40.000 0.62 0.00 39.06 3.18
3059 4133 6.095580 TGAGTATAAGACTAGCCACAGTGAAG 59.904 42.308 0.62 0.00 39.06 3.02
3060 4134 6.188407 AGTATAAGACTAGCCACAGTGAAGA 58.812 40.000 0.62 0.00 36.27 2.87
3061 4135 3.951775 AAGACTAGCCACAGTGAAGAG 57.048 47.619 0.62 0.00 0.00 2.85
3062 4136 2.883026 AGACTAGCCACAGTGAAGAGT 58.117 47.619 0.62 1.45 0.00 3.24
3063 4137 4.035612 AGACTAGCCACAGTGAAGAGTA 57.964 45.455 0.62 0.00 0.00 2.59
3064 4138 4.408276 AGACTAGCCACAGTGAAGAGTAA 58.592 43.478 0.62 0.00 0.00 2.24
3065 4139 4.218852 AGACTAGCCACAGTGAAGAGTAAC 59.781 45.833 0.62 0.00 0.00 2.50
3066 4140 3.895656 ACTAGCCACAGTGAAGAGTAACA 59.104 43.478 0.62 0.00 0.00 2.41
3067 4141 4.528596 ACTAGCCACAGTGAAGAGTAACAT 59.471 41.667 0.62 0.00 0.00 2.71
3068 4142 5.715279 ACTAGCCACAGTGAAGAGTAACATA 59.285 40.000 0.62 0.00 0.00 2.29
3069 4143 5.683876 AGCCACAGTGAAGAGTAACATAT 57.316 39.130 0.62 0.00 0.00 1.78
3071 4145 6.574350 AGCCACAGTGAAGAGTAACATATAC 58.426 40.000 0.62 0.00 0.00 1.47
3072 4146 6.381420 AGCCACAGTGAAGAGTAACATATACT 59.619 38.462 0.62 0.00 0.00 2.12
3074 4148 7.863375 GCCACAGTGAAGAGTAACATATACTAG 59.137 40.741 0.62 0.00 0.00 2.57
3075 4149 8.904834 CCACAGTGAAGAGTAACATATACTAGT 58.095 37.037 0.62 0.00 0.00 2.57
3107 4181 9.474920 ACACGTATCTCTAGACTATGTTACTAC 57.525 37.037 0.00 0.00 0.00 2.73
3108 4182 9.473640 CACGTATCTCTAGACTATGTTACTACA 57.526 37.037 0.00 0.00 38.95 2.74
3119 4193 8.475639 AGACTATGTTACTACATTTACAGTGGG 58.524 37.037 0.00 0.00 42.29 4.61
3121 4195 9.258629 ACTATGTTACTACATTTACAGTGGGTA 57.741 33.333 0.00 0.00 42.29 3.69
3123 4197 7.543359 TGTTACTACATTTACAGTGGGTAGT 57.457 36.000 14.08 14.08 44.74 2.73
3125 4199 9.087871 TGTTACTACATTTACAGTGGGTAGTAA 57.912 33.333 18.90 18.90 46.76 2.24
3135 4209 8.836268 TTACAGTGGGTAGTAATTTAAGTGTG 57.164 34.615 0.00 0.00 32.49 3.82
3137 4211 7.686434 ACAGTGGGTAGTAATTTAAGTGTGAT 58.314 34.615 0.00 0.00 0.00 3.06
3139 4213 9.661563 CAGTGGGTAGTAATTTAAGTGTGATAA 57.338 33.333 0.00 0.00 0.00 1.75
3140 4214 9.662947 AGTGGGTAGTAATTTAAGTGTGATAAC 57.337 33.333 0.00 0.00 0.00 1.89
3141 4215 9.439500 GTGGGTAGTAATTTAAGTGTGATAACA 57.561 33.333 0.00 0.00 0.00 2.41
3144 4218 9.931210 GGTAGTAATTTAAGTGTGATAACATGC 57.069 33.333 0.00 0.00 0.00 4.06
3153 4227 6.822667 AGTGTGATAACATGCAAAGATTCA 57.177 33.333 0.00 0.00 0.00 2.57
3154 4228 7.400599 AGTGTGATAACATGCAAAGATTCAT 57.599 32.000 0.00 0.00 0.00 2.57
3157 4231 9.571810 GTGTGATAACATGCAAAGATTCATTTA 57.428 29.630 0.00 0.00 0.00 1.40
3186 4260 8.874156 AGGTTATAGACTCATATTGCATTGAGA 58.126 33.333 21.77 6.70 41.53 3.27
3188 4262 9.481340 GTTATAGACTCATATTGCATTGAGACA 57.519 33.333 21.77 10.72 41.53 3.41
3190 4264 6.862711 AGACTCATATTGCATTGAGACATG 57.137 37.500 21.77 5.67 41.53 3.21
3191 4265 6.354938 AGACTCATATTGCATTGAGACATGT 58.645 36.000 21.77 0.00 41.53 3.21
3192 4266 7.503549 AGACTCATATTGCATTGAGACATGTA 58.496 34.615 21.77 0.00 41.53 2.29
3193 4267 7.989170 AGACTCATATTGCATTGAGACATGTAA 59.011 33.333 21.77 0.00 41.53 2.41
3194 4268 8.687292 ACTCATATTGCATTGAGACATGTAAT 57.313 30.769 21.77 0.90 41.53 1.89
3195 4269 8.565416 ACTCATATTGCATTGAGACATGTAATG 58.435 33.333 21.77 13.30 45.06 1.90
3228 4302 7.999450 ACTAGCTAAGTTACTACAACTGTCT 57.001 36.000 0.00 0.00 33.35 3.41
3229 4303 8.406730 ACTAGCTAAGTTACTACAACTGTCTT 57.593 34.615 0.00 0.00 33.35 3.01
3230 4304 8.858094 ACTAGCTAAGTTACTACAACTGTCTTT 58.142 33.333 0.00 0.00 33.35 2.52
3231 4305 9.344309 CTAGCTAAGTTACTACAACTGTCTTTC 57.656 37.037 0.00 0.00 0.00 2.62
3232 4306 7.953752 AGCTAAGTTACTACAACTGTCTTTCT 58.046 34.615 0.00 0.00 0.00 2.52
3233 4307 8.083462 AGCTAAGTTACTACAACTGTCTTTCTC 58.917 37.037 0.00 0.00 0.00 2.87
3234 4308 7.328982 GCTAAGTTACTACAACTGTCTTTCTCC 59.671 40.741 0.00 0.00 0.00 3.71
3235 4309 6.980416 AGTTACTACAACTGTCTTTCTCCT 57.020 37.500 0.00 0.00 0.00 3.69
3236 4310 6.983984 AGTTACTACAACTGTCTTTCTCCTC 58.016 40.000 0.00 0.00 0.00 3.71
3237 4311 6.550108 AGTTACTACAACTGTCTTTCTCCTCA 59.450 38.462 0.00 0.00 0.00 3.86
3238 4312 7.233757 AGTTACTACAACTGTCTTTCTCCTCAT 59.766 37.037 0.00 0.00 0.00 2.90
3239 4313 6.426646 ACTACAACTGTCTTTCTCCTCATT 57.573 37.500 0.00 0.00 0.00 2.57
3240 4314 7.540474 ACTACAACTGTCTTTCTCCTCATTA 57.460 36.000 0.00 0.00 0.00 1.90
3241 4315 7.963532 ACTACAACTGTCTTTCTCCTCATTAA 58.036 34.615 0.00 0.00 0.00 1.40
3242 4316 8.598041 ACTACAACTGTCTTTCTCCTCATTAAT 58.402 33.333 0.00 0.00 0.00 1.40
3243 4317 9.442047 CTACAACTGTCTTTCTCCTCATTAATT 57.558 33.333 0.00 0.00 0.00 1.40
3244 4318 8.329203 ACAACTGTCTTTCTCCTCATTAATTC 57.671 34.615 0.00 0.00 0.00 2.17
3245 4319 7.939039 ACAACTGTCTTTCTCCTCATTAATTCA 59.061 33.333 0.00 0.00 0.00 2.57
3246 4320 8.954350 CAACTGTCTTTCTCCTCATTAATTCAT 58.046 33.333 0.00 0.00 0.00 2.57
3247 4321 9.525826 AACTGTCTTTCTCCTCATTAATTCATT 57.474 29.630 0.00 0.00 0.00 2.57
3248 4322 8.954350 ACTGTCTTTCTCCTCATTAATTCATTG 58.046 33.333 0.00 0.00 0.00 2.82
3249 4323 8.868522 TGTCTTTCTCCTCATTAATTCATTGT 57.131 30.769 0.00 0.00 0.00 2.71
3250 4324 8.950210 TGTCTTTCTCCTCATTAATTCATTGTC 58.050 33.333 0.00 0.00 0.00 3.18
3251 4325 8.950210 GTCTTTCTCCTCATTAATTCATTGTCA 58.050 33.333 0.00 0.00 0.00 3.58
3252 4326 8.950210 TCTTTCTCCTCATTAATTCATTGTCAC 58.050 33.333 0.00 0.00 0.00 3.67
3253 4327 8.634335 TTTCTCCTCATTAATTCATTGTCACA 57.366 30.769 0.00 0.00 0.00 3.58
3254 4328 8.812513 TTCTCCTCATTAATTCATTGTCACAT 57.187 30.769 0.00 0.00 0.00 3.21
3255 4329 9.904198 TTCTCCTCATTAATTCATTGTCACATA 57.096 29.630 0.00 0.00 0.00 2.29
3256 4330 9.904198 TCTCCTCATTAATTCATTGTCACATAA 57.096 29.630 0.00 0.00 0.00 1.90
3258 4332 8.623903 TCCTCATTAATTCATTGTCACATAAGC 58.376 33.333 0.00 0.00 0.00 3.09
3259 4333 8.407832 CCTCATTAATTCATTGTCACATAAGCA 58.592 33.333 0.00 0.00 0.00 3.91
3289 4363 4.670227 GAGTTGGACTCAATGTTACTGC 57.330 45.455 3.33 0.00 44.45 4.40
3291 4365 4.067896 AGTTGGACTCAATGTTACTGCTG 58.932 43.478 0.00 0.00 35.10 4.41
3292 4366 4.065088 GTTGGACTCAATGTTACTGCTGA 58.935 43.478 0.00 0.00 35.10 4.26
3293 4367 4.350368 TGGACTCAATGTTACTGCTGAA 57.650 40.909 0.00 0.00 0.00 3.02
3294 4368 4.318332 TGGACTCAATGTTACTGCTGAAG 58.682 43.478 0.00 0.00 0.00 3.02
3295 4369 4.202357 TGGACTCAATGTTACTGCTGAAGT 60.202 41.667 0.00 0.00 43.40 3.01
3297 4371 5.932303 GGACTCAATGTTACTGCTGAAGTTA 59.068 40.000 0.00 0.00 40.56 2.24
3298 4372 6.128526 GGACTCAATGTTACTGCTGAAGTTAC 60.129 42.308 0.00 0.00 40.56 2.50
3299 4373 6.525629 ACTCAATGTTACTGCTGAAGTTACT 58.474 36.000 6.50 0.00 38.87 2.24
3300 4374 6.647067 ACTCAATGTTACTGCTGAAGTTACTC 59.353 38.462 6.50 0.00 38.87 2.59
3302 4376 4.267349 TGTTACTGCTGAAGTTACTCCC 57.733 45.455 6.50 0.00 38.87 4.30
3303 4377 3.644265 TGTTACTGCTGAAGTTACTCCCA 59.356 43.478 6.50 0.00 38.87 4.37
3304 4378 2.841442 ACTGCTGAAGTTACTCCCAC 57.159 50.000 0.00 0.00 34.57 4.61
3306 4380 2.037772 ACTGCTGAAGTTACTCCCACTG 59.962 50.000 0.00 0.00 34.57 3.66
3307 4381 2.037772 CTGCTGAAGTTACTCCCACTGT 59.962 50.000 0.00 0.00 0.00 3.55
3308 4382 2.224281 TGCTGAAGTTACTCCCACTGTG 60.224 50.000 0.00 0.00 0.00 3.66
3309 4383 2.037251 GCTGAAGTTACTCCCACTGTGA 59.963 50.000 9.86 0.00 0.00 3.58
3311 4385 3.305720 TGAAGTTACTCCCACTGTGACT 58.694 45.455 9.86 0.30 36.11 3.41
3312 4386 4.476297 TGAAGTTACTCCCACTGTGACTA 58.524 43.478 9.86 0.00 33.98 2.59
3380 5143 3.547513 CCCGTCCCCGATTCTCCC 61.548 72.222 0.00 0.00 35.63 4.30
3381 5144 3.912907 CCGTCCCCGATTCTCCCG 61.913 72.222 0.00 0.00 35.63 5.14
3389 5152 4.483243 GATTCTCCCGGCCGGCAA 62.483 66.667 39.46 28.40 0.00 4.52
3390 5153 4.796495 ATTCTCCCGGCCGGCAAC 62.796 66.667 39.46 11.20 0.00 4.17
3443 5206 6.399639 TTCAGTTTTATTTTCACACCCTCC 57.600 37.500 0.00 0.00 0.00 4.30
3487 5303 6.808008 AAGACTTTACACGCTACAGTAGTA 57.192 37.500 9.42 0.00 0.00 1.82
3488 5304 6.175712 AGACTTTACACGCTACAGTAGTAC 57.824 41.667 9.42 0.00 0.00 2.73
3571 5595 1.738099 CGTAGCTGGCTCAACGCTT 60.738 57.895 0.00 0.00 39.13 4.68
3574 5598 0.874390 TAGCTGGCTCAACGCTTTTG 59.126 50.000 0.00 0.00 39.13 2.44
3575 5599 2.018324 GCTGGCTCAACGCTTTTGC 61.018 57.895 0.00 0.00 43.23 3.68
3576 5600 1.656441 CTGGCTCAACGCTTTTGCT 59.344 52.632 0.00 0.00 44.80 3.91
3577 5601 0.031178 CTGGCTCAACGCTTTTGCTT 59.969 50.000 0.00 0.00 44.80 3.91
3578 5602 0.248990 TGGCTCAACGCTTTTGCTTG 60.249 50.000 0.00 0.00 44.80 4.01
3579 5603 0.249031 GGCTCAACGCTTTTGCTTGT 60.249 50.000 0.00 0.00 44.80 3.16
3580 5604 1.123655 GCTCAACGCTTTTGCTTGTC 58.876 50.000 0.00 0.00 44.80 3.18
3581 5605 1.388888 CTCAACGCTTTTGCTTGTCG 58.611 50.000 0.00 0.00 44.80 4.35
3582 5606 0.591236 TCAACGCTTTTGCTTGTCGC 60.591 50.000 0.00 0.00 44.80 5.19
3584 5608 2.052237 CGCTTTTGCTTGTCGCGT 60.052 55.556 5.77 0.00 44.80 6.01
3593 5622 3.609422 CTTGTCGCGTTCGTTCGGC 62.609 63.158 5.77 0.00 36.96 5.54
3622 5651 2.438975 CAGGCATGGACGCATGGT 60.439 61.111 5.36 0.00 39.92 3.55
3623 5652 2.438975 AGGCATGGACGCATGGTG 60.439 61.111 5.36 0.00 33.41 4.17
3624 5653 2.438254 GGCATGGACGCATGGTGA 60.438 61.111 5.36 0.00 33.41 4.02
3625 5654 2.764314 GGCATGGACGCATGGTGAC 61.764 63.158 5.36 0.00 33.41 3.67
3626 5655 1.746615 GCATGGACGCATGGTGACT 60.747 57.895 5.36 0.00 33.41 3.41
3627 5656 1.709147 GCATGGACGCATGGTGACTC 61.709 60.000 5.36 0.00 33.41 3.36
3628 5657 1.091771 CATGGACGCATGGTGACTCC 61.092 60.000 0.00 0.00 0.00 3.85
3755 6132 2.073816 GACCATGTTCGTGGATTCGTT 58.926 47.619 16.70 0.00 42.02 3.85
3758 6135 1.060553 CATGTTCGTGGATTCGTTCGG 59.939 52.381 0.00 0.00 0.00 4.30
3803 6243 2.361610 CCTTTGGTGCCATCGCCT 60.362 61.111 0.00 0.00 43.26 5.52
3809 6249 2.501128 GTGCCATCGCCTAGCTGA 59.499 61.111 0.00 0.00 0.00 4.26
3810 6250 1.070445 GTGCCATCGCCTAGCTGAT 59.930 57.895 0.00 0.00 0.00 2.90
3816 6256 1.032794 ATCGCCTAGCTGATCGTTGA 58.967 50.000 0.00 0.00 0.00 3.18
3837 6277 0.677288 GGGGTTTAGGGTGTGTTTGC 59.323 55.000 0.00 0.00 0.00 3.68
3852 6305 4.821177 TGCTAGTGCATGAGCTCG 57.179 55.556 19.81 0.00 45.31 5.03
3855 6308 1.066929 TGCTAGTGCATGAGCTCGAAA 60.067 47.619 19.81 0.00 45.31 3.46
3880 6333 6.910430 AGTTTCGTACTCAATCCACTTTTGGA 60.910 38.462 0.00 0.00 44.87 3.53
3881 6334 8.332958 AGTTTCGTACTCAATCCACTTTTGGAA 61.333 37.037 0.00 0.00 44.26 3.53
3918 6401 2.682856 GCACAAAGAGAGAACACCACAA 59.317 45.455 0.00 0.00 0.00 3.33
3928 6411 1.862201 GAACACCACAACATCGTTCGA 59.138 47.619 0.00 0.00 0.00 3.71
3933 6416 2.875933 ACCACAACATCGTTCGATTGTT 59.124 40.909 10.21 11.75 0.00 2.83
3935 6418 4.084223 ACCACAACATCGTTCGATTGTTAC 60.084 41.667 16.05 0.00 0.00 2.50
3941 6424 1.656594 TCGTTCGATTGTTACCATGCG 59.343 47.619 0.00 0.00 0.00 4.73
3957 6440 2.395690 CGCGAGCAAAGTAAGCGG 59.604 61.111 0.00 0.00 46.06 5.52
3962 6445 1.289109 GAGCAAAGTAAGCGGCGACA 61.289 55.000 12.98 0.00 37.01 4.35
4097 6601 9.800433 ATGTTCAAAATTCCAAAAACAAAATCC 57.200 25.926 0.00 0.00 31.19 3.01
4098 6602 8.796475 TGTTCAAAATTCCAAAAACAAAATCCA 58.204 25.926 0.00 0.00 0.00 3.41
4099 6603 9.800433 GTTCAAAATTCCAAAAACAAAATCCAT 57.200 25.926 0.00 0.00 0.00 3.41
4300 7081 8.307582 ACAATACTACTAAGGACTGCAATACT 57.692 34.615 0.00 0.00 0.00 2.12
4308 7089 3.412386 AGGACTGCAATACTCAACAACC 58.588 45.455 0.00 0.00 0.00 3.77
4338 7119 1.012086 CAGGATGGCATCTGTGAACG 58.988 55.000 25.48 4.55 0.00 3.95
4382 7164 4.524316 TGGAGATGGCATTTTTGACAAG 57.476 40.909 0.00 0.00 0.00 3.16
4386 7168 5.990996 GGAGATGGCATTTTTGACAAGAAAA 59.009 36.000 0.00 0.00 0.00 2.29
4392 7174 5.207033 GCATTTTTGACAAGAAAACATGGC 58.793 37.500 0.00 0.00 0.00 4.40
4394 7176 6.513720 GCATTTTTGACAAGAAAACATGGCAT 60.514 34.615 0.00 0.00 33.82 4.40
4473 7255 0.761802 GCTATGAGGGGGTTCTCTGG 59.238 60.000 0.00 0.00 34.98 3.86
4484 7266 1.705745 GGTTCTCTGGGGTTTTCCTCT 59.294 52.381 0.00 0.00 42.05 3.69
4487 7269 1.705186 TCTCTGGGGTTTTCCTCTTGG 59.295 52.381 0.00 0.00 42.05 3.61
4506 7288 2.174639 TGGGAAATGGTCGCCAGATAAT 59.825 45.455 4.90 0.00 36.75 1.28
4548 7330 6.042666 ACAACATGGTTTATTTTAGGGCAACT 59.957 34.615 0.00 0.00 0.00 3.16
4568 7350 0.811281 GTGCATAACAGGCTCCAACC 59.189 55.000 0.00 0.00 0.00 3.77
4582 7364 2.131854 TCCAACCCTCAAGGAGAAACA 58.868 47.619 0.00 0.00 39.89 2.83
4591 7373 5.363939 CCTCAAGGAGAAACAGTGATATCC 58.636 45.833 0.00 1.50 37.39 2.59
4602 7384 6.627087 AACAGTGATATCCTTTTGAGGAGA 57.373 37.500 0.00 0.00 41.88 3.71
4603 7385 6.627087 ACAGTGATATCCTTTTGAGGAGAA 57.373 37.500 0.00 0.00 41.88 2.87
4640 7422 0.588252 GTGATATGGCCGTGTGCATC 59.412 55.000 8.05 2.87 43.89 3.91
4655 7437 1.070445 CATCCCCCGATGCAGAGAC 59.930 63.158 0.00 0.00 39.59 3.36
4745 7692 4.601019 AGAAAATGCGATTAATTGAGGCG 58.399 39.130 6.89 0.00 0.00 5.52
4784 7731 8.353423 ACTTGTGGCAAACTATTATCTTGAAT 57.647 30.769 0.00 0.00 0.00 2.57
4846 8321 4.142730 GCAGAGTTTTGGACAGCAGATTAG 60.143 45.833 0.00 0.00 0.00 1.73
4847 8322 5.240891 CAGAGTTTTGGACAGCAGATTAGA 58.759 41.667 0.00 0.00 0.00 2.10
4848 8323 5.879223 CAGAGTTTTGGACAGCAGATTAGAT 59.121 40.000 0.00 0.00 0.00 1.98
4849 8324 6.036953 CAGAGTTTTGGACAGCAGATTAGATC 59.963 42.308 0.00 0.00 0.00 2.75
4850 8325 5.809001 AGTTTTGGACAGCAGATTAGATCA 58.191 37.500 0.00 0.00 0.00 2.92
4863 8338 2.768253 TAGATCACCCAACTGCACAG 57.232 50.000 0.00 0.00 0.00 3.66
4869 8347 2.105649 TCACCCAACTGCACAGTATCAA 59.894 45.455 3.26 0.00 41.58 2.57
4872 8351 3.507233 ACCCAACTGCACAGTATCAAATG 59.493 43.478 3.26 0.00 41.58 2.32
4891 8370 8.610248 TCAAATGAAACTGACCGTATTTTCTA 57.390 30.769 0.00 0.00 0.00 2.10
4948 8427 1.304464 GAGGTGGAAAGGCAAGGGG 60.304 63.158 0.00 0.00 0.00 4.79
5068 8547 2.890474 GCCATGTTCGACGCCGAT 60.890 61.111 0.00 0.00 45.10 4.18
5190 8685 5.760253 CCTCATGTACTCTGTTTTGTGTTCT 59.240 40.000 0.00 0.00 0.00 3.01
5191 8686 6.260936 CCTCATGTACTCTGTTTTGTGTTCTT 59.739 38.462 0.00 0.00 0.00 2.52
5205 8700 8.850452 GTTTTGTGTTCTTTGTGAAAGACTTAG 58.150 33.333 0.00 0.00 46.53 2.18
5207 8702 7.681939 TGTGTTCTTTGTGAAAGACTTAGTT 57.318 32.000 0.00 0.00 46.53 2.24
5208 8703 7.526608 TGTGTTCTTTGTGAAAGACTTAGTTG 58.473 34.615 0.00 0.00 46.53 3.16
5213 8708 6.317893 TCTTTGTGAAAGACTTAGTTGGTTCC 59.682 38.462 0.00 0.00 42.31 3.62
5214 8709 5.367945 TGTGAAAGACTTAGTTGGTTCCT 57.632 39.130 0.00 0.00 0.00 3.36
5215 8710 5.123227 TGTGAAAGACTTAGTTGGTTCCTG 58.877 41.667 0.00 0.00 0.00 3.86
5218 8713 4.353383 AAGACTTAGTTGGTTCCTGGTC 57.647 45.455 0.00 0.00 0.00 4.02
5219 8714 3.588569 AGACTTAGTTGGTTCCTGGTCT 58.411 45.455 0.00 0.00 0.00 3.85
5221 8716 5.152934 AGACTTAGTTGGTTCCTGGTCTAA 58.847 41.667 0.00 0.00 32.12 2.10
5222 8717 5.785940 AGACTTAGTTGGTTCCTGGTCTAAT 59.214 40.000 0.00 0.00 32.12 1.73
5223 8718 6.958192 AGACTTAGTTGGTTCCTGGTCTAATA 59.042 38.462 0.00 0.00 32.12 0.98
5224 8719 7.456902 AGACTTAGTTGGTTCCTGGTCTAATAA 59.543 37.037 0.00 0.00 32.12 1.40
5230 8733 7.728532 AGTTGGTTCCTGGTCTAATAATTTGTT 59.271 33.333 0.00 0.00 0.00 2.83
5231 8734 9.016438 GTTGGTTCCTGGTCTAATAATTTGTTA 57.984 33.333 0.00 0.00 0.00 2.41
5283 8787 3.507162 TTGCTGACAAGATTCCAGGAA 57.493 42.857 3.72 3.72 36.22 3.36
5292 8796 6.126863 ACAAGATTCCAGGAAATGTCACTA 57.873 37.500 5.81 0.00 0.00 2.74
5361 8865 1.228533 TTTTCGGCTTCAACGGTACC 58.771 50.000 0.16 0.16 0.00 3.34
5368 8872 3.405831 GGCTTCAACGGTACCTAAACTT 58.594 45.455 10.90 0.00 0.00 2.66
5371 8875 2.769893 TCAACGGTACCTAAACTTGGC 58.230 47.619 10.90 0.00 0.00 4.52
5445 9152 7.413446 AGTGAATGATCTCTTGGGGATTTTTA 58.587 34.615 0.00 0.00 0.00 1.52
5460 9167 4.335594 GGATTTTTACATCTTCCAGGGACG 59.664 45.833 0.00 0.00 0.00 4.79
5499 9206 4.925576 GCGATCGACGATGCCGGT 62.926 66.667 21.57 0.00 45.77 5.28
5512 9219 3.246112 CCGGTGGGTGGAAGGACA 61.246 66.667 0.00 0.00 0.00 4.02
5603 9310 2.846693 CGCCGTAAAAGTAAGCCAAAG 58.153 47.619 0.00 0.00 0.00 2.77
5605 9312 3.666111 CGCCGTAAAAGTAAGCCAAAGAC 60.666 47.826 0.00 0.00 0.00 3.01
5759 9488 3.046087 CAGCAGCACAGGTGGTCG 61.046 66.667 0.38 0.00 39.77 4.79
5845 9574 4.362677 TCTGCACTTAATAAGGGAGGACT 58.637 43.478 6.43 0.00 32.08 3.85
5858 9591 0.250513 GAGGACTCATCACCACCCAC 59.749 60.000 0.00 0.00 0.00 4.61
5862 9595 1.556911 GACTCATCACCACCCACTGAT 59.443 52.381 0.00 0.00 0.00 2.90
5943 9678 1.853963 AGCTCCACCTCTTGTACGAT 58.146 50.000 0.00 0.00 0.00 3.73
6160 11278 8.083462 TCAGAATGACATGTACTGTTTGTTAC 57.917 34.615 0.00 0.00 42.56 2.50
6162 11280 8.559536 CAGAATGACATGTACTGTTTGTTACTT 58.440 33.333 0.00 0.00 39.69 2.24
6165 11283 7.477144 TGACATGTACTGTTTGTTACTTCAG 57.523 36.000 0.00 0.00 38.54 3.02
6167 11285 7.551262 TGACATGTACTGTTTGTTACTTCAGTT 59.449 33.333 0.00 0.00 40.77 3.16
6169 11287 9.386010 ACATGTACTGTTTGTTACTTCAGTTAA 57.614 29.630 0.00 3.91 40.77 2.01
6188 11306 9.168451 TCAGTTAATTAACACAAGAAAGTCACA 57.832 29.630 26.06 0.00 38.62 3.58
6340 11458 0.038166 TGGGAGATGCCAACAAGACC 59.962 55.000 0.00 0.00 38.95 3.85
6392 11510 7.038048 TGTGAAAGTGATAGATGTTGAGCTAG 58.962 38.462 0.00 0.00 0.00 3.42
6432 11550 6.656693 CCAAAGCTCAAGAAGAGGAGAATAAA 59.343 38.462 0.00 0.00 44.86 1.40
6473 11591 7.983307 AGCAAAATCTATTGTCTCAAAGCTAG 58.017 34.615 0.00 0.00 32.80 3.42
6507 11630 9.413611 CGATATATGCTAATTGAAATTACTGCG 57.586 33.333 0.00 0.00 29.53 5.18
6518 11641 6.143349 TGAAATTACTGCGTACAAACTACG 57.857 37.500 0.00 0.00 43.13 3.51
6521 11644 0.675633 ACTGCGTACAAACTACGGGT 59.324 50.000 2.38 0.00 40.86 5.28
6611 11734 5.563671 GCTCAGAGATTTTTGTTGGAACCTC 60.564 44.000 0.00 0.00 0.00 3.85
6780 11908 1.589803 CATTCATGGCGCTCATCTGA 58.410 50.000 7.64 2.75 32.92 3.27
6784 11912 0.591659 CATGGCGCTCATCTGAATGG 59.408 55.000 7.64 0.00 32.92 3.16
6785 11913 0.182061 ATGGCGCTCATCTGAATGGT 59.818 50.000 7.64 0.00 33.42 3.55
6787 11915 1.209261 TGGCGCTCATCTGAATGGTTA 59.791 47.619 7.64 0.00 33.42 2.85
6788 11916 1.599542 GGCGCTCATCTGAATGGTTAC 59.400 52.381 7.64 0.00 33.42 2.50
6789 11917 1.599542 GCGCTCATCTGAATGGTTACC 59.400 52.381 0.00 0.00 33.42 2.85
6790 11918 2.905075 CGCTCATCTGAATGGTTACCA 58.095 47.619 6.53 6.53 38.19 3.25
6799 11927 5.630121 TCTGAATGGTTACCAGTGACAAAT 58.370 37.500 9.73 0.00 36.75 2.32
6811 11939 0.030504 TGACAAATGGCGTGCAAGTG 59.969 50.000 0.59 0.00 0.00 3.16
6823 11951 1.377856 GCAAGTGAAGGCCCTCTCC 60.378 63.158 0.00 0.00 0.00 3.71
6824 11952 2.069776 CAAGTGAAGGCCCTCTCCA 58.930 57.895 0.00 0.00 0.00 3.86
6825 11953 0.035630 CAAGTGAAGGCCCTCTCCAG 60.036 60.000 0.00 0.00 0.00 3.86
6826 11954 1.846712 AAGTGAAGGCCCTCTCCAGC 61.847 60.000 0.00 0.00 0.00 4.85
6827 11955 2.123632 TGAAGGCCCTCTCCAGCT 59.876 61.111 0.00 0.00 0.00 4.24
6828 11956 1.992277 TGAAGGCCCTCTCCAGCTC 60.992 63.158 0.00 0.00 0.00 4.09
6829 11957 1.688884 GAAGGCCCTCTCCAGCTCT 60.689 63.158 0.00 0.00 0.00 4.09
6830 11958 1.970352 GAAGGCCCTCTCCAGCTCTG 61.970 65.000 0.00 0.00 0.00 3.35
7057 12204 8.652810 AAATTAAATAACATGCTCTGCCAATC 57.347 30.769 0.00 0.00 0.00 2.67
7059 12206 5.664294 AAATAACATGCTCTGCCAATCAA 57.336 34.783 0.00 0.00 0.00 2.57
7119 12270 9.765795 AATGTACTTACTGATGTAGCTTATTCC 57.234 33.333 0.00 0.00 0.00 3.01
7132 12285 6.493802 TGTAGCTTATTCCGAATAGAGGATGT 59.506 38.462 0.00 0.00 37.65 3.06
7143 12296 0.392729 AGAGGATGTTCAGCAGCAGC 60.393 55.000 0.00 0.00 42.56 5.25
7278 12442 8.428063 ACAAAAATTTGGACTGATGTTGGAATA 58.572 29.630 10.38 0.00 42.34 1.75
7323 12487 6.101997 AGCCTTGCAAGCAAAAGTATATTTC 58.898 36.000 21.43 0.00 35.33 2.17
7460 13242 7.538575 ACAATCAGTCGGAAAATAGAAAATGG 58.461 34.615 0.00 0.00 0.00 3.16
7467 13249 8.971073 AGTCGGAAAATAGAAAATGGAATTGAT 58.029 29.630 0.00 0.00 36.10 2.57
7524 13307 9.256477 GGATTTGAAAAATATCCGGGAATTAAC 57.744 33.333 0.00 0.00 0.00 2.01
7533 13316 8.593945 AATATCCGGGAATTAACATATTGCAT 57.406 30.769 0.00 0.00 0.00 3.96
7553 13336 5.572211 GCATGAATGCGAAAGAAGTTCATA 58.428 37.500 5.50 0.00 44.67 2.15
7556 13339 7.221452 GCATGAATGCGAAAGAAGTTCATAATT 59.779 33.333 5.50 0.00 44.67 1.40
7608 13391 7.568134 GCGCATATTCAAAACCATCATGAATTC 60.568 37.037 0.30 0.00 42.23 2.17
7731 13515 3.829601 ACAATTAGATGAAACCCCGCAAA 59.170 39.130 0.00 0.00 0.00 3.68
7732 13516 4.282195 ACAATTAGATGAAACCCCGCAAAA 59.718 37.500 0.00 0.00 0.00 2.44
7733 13517 3.926821 TTAGATGAAACCCCGCAAAAC 57.073 42.857 0.00 0.00 0.00 2.43
7734 13518 1.698506 AGATGAAACCCCGCAAAACA 58.301 45.000 0.00 0.00 0.00 2.83
7735 13519 2.035632 AGATGAAACCCCGCAAAACAA 58.964 42.857 0.00 0.00 0.00 2.83
7736 13520 2.432510 AGATGAAACCCCGCAAAACAAA 59.567 40.909 0.00 0.00 0.00 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 2.887568 GGCGAGCGTGTCTCCATG 60.888 66.667 0.00 0.00 38.62 3.66
6 7 4.498520 CGGCGAGCGTGTCTCCAT 62.499 66.667 0.00 0.00 38.62 3.41
38 39 4.668118 TTTCCACCGCGTCCGACC 62.668 66.667 4.92 0.00 36.29 4.79
39 40 3.110178 CTTTCCACCGCGTCCGAC 61.110 66.667 4.92 0.00 36.29 4.79
42 43 4.699522 AGGCTTTCCACCGCGTCC 62.700 66.667 4.92 0.00 33.74 4.79
43 44 3.423154 CAGGCTTTCCACCGCGTC 61.423 66.667 4.92 0.00 33.74 5.19
44 45 4.250305 ACAGGCTTTCCACCGCGT 62.250 61.111 4.92 0.00 33.74 6.01
45 46 3.726517 CACAGGCTTTCCACCGCG 61.727 66.667 0.00 0.00 33.74 6.46
46 47 4.043200 GCACAGGCTTTCCACCGC 62.043 66.667 0.00 0.00 36.96 5.68
47 48 2.594303 TGCACAGGCTTTCCACCG 60.594 61.111 0.00 0.00 41.91 4.94
48 49 0.823356 TTCTGCACAGGCTTTCCACC 60.823 55.000 0.00 0.00 41.91 4.61
49 50 0.595095 CTTCTGCACAGGCTTTCCAC 59.405 55.000 0.00 0.00 41.91 4.02
50 51 0.473755 TCTTCTGCACAGGCTTTCCA 59.526 50.000 0.00 0.00 41.91 3.53
51 52 1.609208 TTCTTCTGCACAGGCTTTCC 58.391 50.000 0.00 0.00 41.91 3.13
52 53 2.880890 TCTTTCTTCTGCACAGGCTTTC 59.119 45.455 0.00 0.00 41.91 2.62
53 54 2.620585 GTCTTTCTTCTGCACAGGCTTT 59.379 45.455 0.00 0.00 41.91 3.51
54 55 2.225467 GTCTTTCTTCTGCACAGGCTT 58.775 47.619 0.00 0.00 41.91 4.35
55 56 1.875576 CGTCTTTCTTCTGCACAGGCT 60.876 52.381 0.00 0.00 41.91 4.58
56 57 0.514691 CGTCTTTCTTCTGCACAGGC 59.485 55.000 0.00 0.00 41.68 4.85
57 58 1.151668 CCGTCTTTCTTCTGCACAGG 58.848 55.000 0.00 0.00 0.00 4.00
58 59 1.795286 GTCCGTCTTTCTTCTGCACAG 59.205 52.381 0.00 0.00 0.00 3.66
59 60 1.138069 TGTCCGTCTTTCTTCTGCACA 59.862 47.619 0.00 0.00 0.00 4.57
60 61 1.795286 CTGTCCGTCTTTCTTCTGCAC 59.205 52.381 0.00 0.00 0.00 4.57
61 62 1.686587 TCTGTCCGTCTTTCTTCTGCA 59.313 47.619 0.00 0.00 0.00 4.41
62 63 2.440539 TCTGTCCGTCTTTCTTCTGC 57.559 50.000 0.00 0.00 0.00 4.26
63 64 4.372656 ACTTTCTGTCCGTCTTTCTTCTG 58.627 43.478 0.00 0.00 0.00 3.02
64 65 4.623002 GACTTTCTGTCCGTCTTTCTTCT 58.377 43.478 0.00 0.00 39.69 2.85
65 66 4.975921 GACTTTCTGTCCGTCTTTCTTC 57.024 45.455 0.00 0.00 39.69 2.87
78 79 1.318576 GTTGGGGTGTGGACTTTCTG 58.681 55.000 0.00 0.00 0.00 3.02
86 87 2.669569 CTCGCTGTTGGGGTGTGG 60.670 66.667 0.00 0.00 0.00 4.17
91 92 1.817099 GATGAGCTCGCTGTTGGGG 60.817 63.158 9.64 0.00 0.00 4.96
92 93 0.809241 GAGATGAGCTCGCTGTTGGG 60.809 60.000 13.00 0.00 33.17 4.12
283 291 4.500116 GACTCGGCTCCAGCGTCC 62.500 72.222 0.00 0.00 43.26 4.79
294 311 0.244994 CTTGGACAGGACAGACTCGG 59.755 60.000 0.00 0.00 0.00 4.63
325 342 2.616960 TGTTCACATGCGTATGTCCTC 58.383 47.619 16.73 9.76 45.53 3.71
397 432 2.125229 CTCGAGCAGCAGCCATGT 60.125 61.111 0.00 0.00 43.56 3.21
398 433 1.883544 CTCTCGAGCAGCAGCCATG 60.884 63.158 7.81 0.00 43.56 3.66
399 434 2.295472 GACTCTCGAGCAGCAGCCAT 62.295 60.000 7.81 0.00 43.56 4.40
400 435 2.993840 ACTCTCGAGCAGCAGCCA 60.994 61.111 7.81 0.00 43.56 4.75
401 436 2.202730 GACTCTCGAGCAGCAGCC 60.203 66.667 7.81 0.00 43.56 4.85
402 437 2.579249 CGACTCTCGAGCAGCAGC 60.579 66.667 7.81 0.00 43.74 5.25
403 438 3.182312 TCGACTCTCGAGCAGCAG 58.818 61.111 7.81 2.03 44.82 4.24
450 485 4.024545 CGGGGTGTGGGGGTGTAC 62.025 72.222 0.00 0.00 0.00 2.90
519 554 7.049133 TGGGTGTGTGTATTATTGGTGTATAC 58.951 38.462 0.00 0.00 0.00 1.47
543 582 2.375146 GTTGGTATTTAGGGGCCACTG 58.625 52.381 20.90 0.00 0.00 3.66
557 596 4.571369 TTATTGGTCCATTCCGTTGGTA 57.429 40.909 0.00 0.00 38.01 3.25
585 624 3.366679 CCAAGTGGTGGTACTACGTACTG 60.367 52.174 15.29 10.77 43.20 2.74
623 662 0.183492 GGGAATGTGGCCATGAGCTA 59.817 55.000 9.72 0.00 43.05 3.32
654 706 0.798776 GCGGTTGGTGAGATGAGTTG 59.201 55.000 0.00 0.00 0.00 3.16
655 707 0.321653 GGCGGTTGGTGAGATGAGTT 60.322 55.000 0.00 0.00 0.00 3.01
656 708 1.296715 GGCGGTTGGTGAGATGAGT 59.703 57.895 0.00 0.00 0.00 3.41
657 709 0.742281 CTGGCGGTTGGTGAGATGAG 60.742 60.000 0.00 0.00 0.00 2.90
678 730 8.029522 CCATATAGTAGTATTTGCGTGATGAGT 58.970 37.037 0.00 0.00 0.00 3.41
679 731 7.009631 GCCATATAGTAGTATTTGCGTGATGAG 59.990 40.741 0.00 0.00 0.00 2.90
680 732 6.811665 GCCATATAGTAGTATTTGCGTGATGA 59.188 38.462 0.00 0.00 0.00 2.92
682 734 6.697395 TGCCATATAGTAGTATTTGCGTGAT 58.303 36.000 0.00 0.00 0.00 3.06
683 735 6.091718 TGCCATATAGTAGTATTTGCGTGA 57.908 37.500 0.00 0.00 0.00 4.35
690 758 8.981659 TGTAGATGCATGCCATATAGTAGTATT 58.018 33.333 16.68 0.00 33.29 1.89
722 790 3.120408 CGAAACAGCTTCTCAATGGACAG 60.120 47.826 0.00 0.00 31.20 3.51
828 928 2.021793 CGCGTTGATCGGCACATG 59.978 61.111 0.00 0.00 40.26 3.21
829 929 3.864686 GCGCGTTGATCGGCACAT 61.865 61.111 8.43 0.00 40.26 3.21
834 934 2.277692 TAGACGCGCGTTGATCGG 60.278 61.111 38.03 4.76 40.26 4.18
835 935 1.521749 GAGTAGACGCGCGTTGATCG 61.522 60.000 38.03 5.64 43.12 3.69
836 936 1.201098 GGAGTAGACGCGCGTTGATC 61.201 60.000 38.03 28.35 0.00 2.92
837 937 1.226603 GGAGTAGACGCGCGTTGAT 60.227 57.895 38.03 26.53 0.00 2.57
838 938 2.177531 GGAGTAGACGCGCGTTGA 59.822 61.111 38.03 24.62 0.00 3.18
839 939 1.868251 GAGGAGTAGACGCGCGTTG 60.868 63.158 38.03 8.31 0.00 4.10
840 940 2.484203 GAGGAGTAGACGCGCGTT 59.516 61.111 38.03 26.69 0.00 4.84
841 941 3.507009 GGAGGAGTAGACGCGCGT 61.507 66.667 38.52 38.52 0.00 6.01
843 943 2.829458 AGGGAGGAGTAGACGCGC 60.829 66.667 5.73 0.00 0.00 6.86
845 945 0.394625 ACTGAGGGAGGAGTAGACGC 60.395 60.000 0.00 0.00 0.00 5.19
846 946 1.670791 GACTGAGGGAGGAGTAGACG 58.329 60.000 0.00 0.00 0.00 4.18
847 947 1.285373 TGGACTGAGGGAGGAGTAGAC 59.715 57.143 0.00 0.00 0.00 2.59
848 948 1.285373 GTGGACTGAGGGAGGAGTAGA 59.715 57.143 0.00 0.00 0.00 2.59
849 949 1.770294 GTGGACTGAGGGAGGAGTAG 58.230 60.000 0.00 0.00 0.00 2.57
850 950 0.034380 CGTGGACTGAGGGAGGAGTA 60.034 60.000 0.00 0.00 0.00 2.59
851 951 1.304547 CGTGGACTGAGGGAGGAGT 60.305 63.158 0.00 0.00 0.00 3.85
852 952 2.716017 GCGTGGACTGAGGGAGGAG 61.716 68.421 0.00 0.00 0.00 3.69
856 956 4.988716 ACGGCGTGGACTGAGGGA 62.989 66.667 13.76 0.00 0.00 4.20
858 958 1.384989 ATAGACGGCGTGGACTGAGG 61.385 60.000 21.19 0.00 0.00 3.86
859 959 1.306148 TATAGACGGCGTGGACTGAG 58.694 55.000 21.19 0.00 0.00 3.35
860 960 1.977056 ATATAGACGGCGTGGACTGA 58.023 50.000 21.19 1.51 0.00 3.41
861 961 3.822996 CTTATATAGACGGCGTGGACTG 58.177 50.000 21.19 0.00 0.00 3.51
862 962 2.228343 GCTTATATAGACGGCGTGGACT 59.772 50.000 21.19 11.61 0.00 3.85
863 963 2.593257 GCTTATATAGACGGCGTGGAC 58.407 52.381 21.19 2.31 0.00 4.02
864 964 1.542915 GGCTTATATAGACGGCGTGGA 59.457 52.381 21.19 4.78 0.00 4.02
865 965 1.403780 GGGCTTATATAGACGGCGTGG 60.404 57.143 21.19 0.00 29.87 4.94
866 966 1.731424 CGGGCTTATATAGACGGCGTG 60.731 57.143 21.19 0.19 29.87 5.34
867 967 0.524862 CGGGCTTATATAGACGGCGT 59.475 55.000 14.65 14.65 29.87 5.68
868 968 0.801067 GCGGGCTTATATAGACGGCG 60.801 60.000 4.80 4.80 46.63 6.46
870 970 1.544691 AGTGCGGGCTTATATAGACGG 59.455 52.381 0.00 0.00 35.38 4.79
871 971 4.634184 ATAGTGCGGGCTTATATAGACG 57.366 45.455 0.00 0.00 29.87 4.18
872 972 5.105473 TGGAATAGTGCGGGCTTATATAGAC 60.105 44.000 0.00 0.00 0.00 2.59
915 1015 2.681778 ACGACTAGCTGGCTGGCT 60.682 61.111 5.25 10.02 45.29 4.75
1119 1257 4.947147 GGCACCACCAGGAACGCA 62.947 66.667 0.00 0.00 38.86 5.24
1248 1386 4.814294 CACTGGTACCGGCGCTCC 62.814 72.222 21.25 3.67 0.00 4.70
1403 1562 1.539929 GCGAGCAAGCACTAGGATGAT 60.540 52.381 0.00 0.00 37.05 2.45
1404 1563 0.179100 GCGAGCAAGCACTAGGATGA 60.179 55.000 0.00 0.00 37.05 2.92
1422 1581 2.727916 CGCCGGTCAACATTTTTCTAGC 60.728 50.000 1.90 0.00 0.00 3.42
1423 1582 2.159572 CCGCCGGTCAACATTTTTCTAG 60.160 50.000 1.90 0.00 0.00 2.43
1427 1586 1.006688 GCCGCCGGTCAACATTTTT 60.007 52.632 4.45 0.00 0.00 1.94
1455 1637 2.351924 ATCCCACCACACCACACCAC 62.352 60.000 0.00 0.00 0.00 4.16
1467 1649 6.096673 ACAAATCAGTAAACAAATCCCACC 57.903 37.500 0.00 0.00 0.00 4.61
1470 1652 7.213678 TCCAAACAAATCAGTAAACAAATCCC 58.786 34.615 0.00 0.00 0.00 3.85
1497 1686 0.726827 CATCCGATCCAACAACACCG 59.273 55.000 0.00 0.00 0.00 4.94
1503 1700 0.473755 CCCATCCATCCGATCCAACA 59.526 55.000 0.00 0.00 0.00 3.33
1518 1715 4.228824 CCTTCATTCCCATTCATTCCCAT 58.771 43.478 0.00 0.00 0.00 4.00
1519 1716 3.012730 ACCTTCATTCCCATTCATTCCCA 59.987 43.478 0.00 0.00 0.00 4.37
1520 1717 3.385755 CACCTTCATTCCCATTCATTCCC 59.614 47.826 0.00 0.00 0.00 3.97
1524 1721 5.191727 TGTACACCTTCATTCCCATTCAT 57.808 39.130 0.00 0.00 0.00 2.57
1525 1722 4.649267 TGTACACCTTCATTCCCATTCA 57.351 40.909 0.00 0.00 0.00 2.57
1646 1843 1.198408 CGGATGGATGGATTGATTGCG 59.802 52.381 0.00 0.00 0.00 4.85
1671 1878 1.790090 CGGCGAGCAGAGCTAGATGA 61.790 60.000 0.00 0.00 39.88 2.92
1750 2368 1.133253 CAAGGAGCGAACATGCACG 59.867 57.895 7.59 7.59 37.31 5.34
1751 2369 1.237285 ACCAAGGAGCGAACATGCAC 61.237 55.000 0.00 0.00 37.31 4.57
1752 2370 0.537143 AACCAAGGAGCGAACATGCA 60.537 50.000 0.00 0.00 37.31 3.96
1755 2380 2.814336 GAGAAAACCAAGGAGCGAACAT 59.186 45.455 0.00 0.00 0.00 2.71
1779 2404 4.826274 ACTAGTACGTACAGTAGTGGGA 57.174 45.455 26.55 0.84 40.34 4.37
1789 2414 8.909671 GGAAATTATGCATGTACTAGTACGTAC 58.090 37.037 24.00 19.76 40.06 3.67
1790 2415 8.084073 GGGAAATTATGCATGTACTAGTACGTA 58.916 37.037 24.00 12.67 38.85 3.57
1791 2416 6.927381 GGGAAATTATGCATGTACTAGTACGT 59.073 38.462 24.36 22.24 38.85 3.57
1792 2417 7.152645 AGGGAAATTATGCATGTACTAGTACG 58.847 38.462 24.36 14.26 38.85 3.67
1793 2418 7.603024 GGAGGGAAATTATGCATGTACTAGTAC 59.397 40.741 23.58 23.58 36.63 2.73
1794 2419 7.256547 GGGAGGGAAATTATGCATGTACTAGTA 60.257 40.741 10.16 0.00 0.00 1.82
1795 2420 6.465894 GGGAGGGAAATTATGCATGTACTAGT 60.466 42.308 10.16 0.00 0.00 2.57
1796 2421 5.940470 GGGAGGGAAATTATGCATGTACTAG 59.060 44.000 10.16 0.00 0.00 2.57
1797 2422 5.222048 GGGGAGGGAAATTATGCATGTACTA 60.222 44.000 10.16 0.00 0.00 1.82
1798 2423 4.447762 GGGGAGGGAAATTATGCATGTACT 60.448 45.833 10.16 0.00 0.00 2.73
1808 2433 1.638589 CACACAGGGGGAGGGAAATTA 59.361 52.381 0.00 0.00 0.00 1.40
1909 2545 0.386476 GTCACCCGTCTGTGTGTGTA 59.614 55.000 0.00 0.00 37.51 2.90
1915 2551 2.034879 GCCATGTCACCCGTCTGTG 61.035 63.158 0.00 0.00 37.59 3.66
1916 2552 2.347490 GCCATGTCACCCGTCTGT 59.653 61.111 0.00 0.00 0.00 3.41
1945 2590 2.359900 GTAGGACTAGGACCGAAACGA 58.640 52.381 0.00 0.00 0.00 3.85
1953 2598 1.049402 GCCCATGGTAGGACTAGGAC 58.951 60.000 11.73 0.00 0.00 3.85
1993 2638 1.003118 TCATGTGGCAACTGGTAGTCC 59.997 52.381 0.00 0.00 37.61 3.85
1994 2639 2.076863 GTCATGTGGCAACTGGTAGTC 58.923 52.381 0.00 0.00 37.61 2.59
1995 2640 1.419762 TGTCATGTGGCAACTGGTAGT 59.580 47.619 0.00 0.00 37.61 2.73
1996 2641 2.183478 TGTCATGTGGCAACTGGTAG 57.817 50.000 0.00 0.00 37.61 3.18
1997 2642 2.435422 CATGTCATGTGGCAACTGGTA 58.565 47.619 4.53 0.00 31.21 3.25
2043 2690 2.046314 CCGATCGGCCAACCACTT 60.046 61.111 23.37 0.00 34.57 3.16
2096 2743 1.668294 CTTGTCAGTCACGGGCTCT 59.332 57.895 0.00 0.00 0.00 4.09
2205 2860 3.576648 GCTAGTAGAGCGACAGTGTTTT 58.423 45.455 0.00 0.00 42.62 2.43
2207 2862 2.923605 GCTAGTAGAGCGACAGTGTT 57.076 50.000 0.00 0.00 42.62 3.32
2217 2872 7.068839 TCCACAGAAATAAAGGAGCTAGTAGAG 59.931 40.741 0.00 0.00 0.00 2.43
2218 2873 6.895756 TCCACAGAAATAAAGGAGCTAGTAGA 59.104 38.462 0.00 0.00 0.00 2.59
2219 2874 7.113658 TCCACAGAAATAAAGGAGCTAGTAG 57.886 40.000 0.00 0.00 0.00 2.57
2220 2875 7.470147 CGATCCACAGAAATAAAGGAGCTAGTA 60.470 40.741 0.00 0.00 32.85 1.82
2221 2876 6.567602 ATCCACAGAAATAAAGGAGCTAGT 57.432 37.500 0.00 0.00 0.00 2.57
2222 2877 5.694006 CGATCCACAGAAATAAAGGAGCTAG 59.306 44.000 0.00 0.00 32.85 3.42
2278 3149 2.793160 TTCTGCTTGCCTGAGAGCGG 62.793 60.000 0.00 0.00 44.70 5.52
2284 3155 0.887836 CACTGCTTCTGCTTGCCTGA 60.888 55.000 0.00 0.00 40.48 3.86
2373 3258 1.003573 AAGGCCGGGATCCTCTTCT 59.996 57.895 12.58 2.15 32.45 2.85
2380 3265 1.954927 CTTTAGACAAGGCCGGGATC 58.045 55.000 2.18 0.00 0.00 3.36
2505 3394 4.022849 AGTGACTAGTGGGTACGTACAAAC 60.023 45.833 26.02 21.35 0.00 2.93
2517 3406 1.402259 CGGCAGAGTAGTGACTAGTGG 59.598 57.143 4.39 0.00 35.45 4.00
2518 3407 1.402259 CCGGCAGAGTAGTGACTAGTG 59.598 57.143 4.39 0.00 35.45 2.74
2519 3408 1.752683 CCGGCAGAGTAGTGACTAGT 58.247 55.000 0.00 0.00 35.45 2.57
2520 3409 0.382515 GCCGGCAGAGTAGTGACTAG 59.617 60.000 24.80 0.00 35.45 2.57
2523 3412 2.202623 CGCCGGCAGAGTAGTGAC 60.203 66.667 28.98 0.00 0.00 3.67
2549 3438 3.732721 GCGAAATAAATGGCAAGATCAGC 59.267 43.478 0.00 0.00 0.00 4.26
2553 3442 7.445402 ACTGTATAGCGAAATAAATGGCAAGAT 59.555 33.333 0.00 0.00 0.00 2.40
2558 3464 7.653767 ACTACTGTATAGCGAAATAAATGGC 57.346 36.000 0.00 0.00 0.00 4.40
2601 3508 8.184192 ACATGAGGAATAAAACTTGCTAATTCG 58.816 33.333 0.00 0.00 0.00 3.34
2629 3537 9.494055 ACCCTGGTACTCTACTATATACGTATA 57.506 37.037 17.24 17.24 0.00 1.47
2630 3538 8.386012 ACCCTGGTACTCTACTATATACGTAT 57.614 38.462 13.54 13.54 0.00 3.06
2631 3539 7.798710 ACCCTGGTACTCTACTATATACGTA 57.201 40.000 0.00 0.00 0.00 3.57
2632 3540 6.694445 ACCCTGGTACTCTACTATATACGT 57.306 41.667 0.00 0.00 0.00 3.57
2633 3541 9.678260 ATTAACCCTGGTACTCTACTATATACG 57.322 37.037 0.00 0.00 0.00 3.06
2635 3543 9.986157 CCATTAACCCTGGTACTCTACTATATA 57.014 37.037 0.00 0.00 0.00 0.86
2636 3544 7.399478 GCCATTAACCCTGGTACTCTACTATAT 59.601 40.741 0.00 0.00 36.10 0.86
2638 3546 5.543020 GCCATTAACCCTGGTACTCTACTAT 59.457 44.000 0.00 0.00 36.10 2.12
2639 3547 4.897670 GCCATTAACCCTGGTACTCTACTA 59.102 45.833 0.00 0.00 36.10 1.82
2640 3548 3.710165 GCCATTAACCCTGGTACTCTACT 59.290 47.826 0.00 0.00 36.10 2.57
2641 3549 3.181457 GGCCATTAACCCTGGTACTCTAC 60.181 52.174 0.00 0.00 36.10 2.59
2643 3551 1.844497 GGCCATTAACCCTGGTACTCT 59.156 52.381 0.00 0.00 36.10 3.24
2645 3553 1.844497 GAGGCCATTAACCCTGGTACT 59.156 52.381 5.01 0.00 36.10 2.73
2646 3554 1.562475 TGAGGCCATTAACCCTGGTAC 59.438 52.381 5.01 0.00 36.10 3.34
2647 3555 1.562475 GTGAGGCCATTAACCCTGGTA 59.438 52.381 5.01 0.00 36.10 3.25
2648 3556 0.331616 GTGAGGCCATTAACCCTGGT 59.668 55.000 5.01 0.00 36.10 4.00
2649 3557 0.748005 CGTGAGGCCATTAACCCTGG 60.748 60.000 5.01 0.00 36.81 4.45
2650 3558 0.035439 ACGTGAGGCCATTAACCCTG 60.035 55.000 5.01 0.00 0.00 4.45
2665 3672 1.290203 GCCATGATGACCTGTACGTG 58.710 55.000 0.00 0.00 0.00 4.49
2677 3684 1.486310 ACGTGTGTCATAGGCCATGAT 59.514 47.619 17.33 0.62 45.37 2.45
2678 3685 0.901827 ACGTGTGTCATAGGCCATGA 59.098 50.000 5.01 9.71 41.52 3.07
2679 3686 2.595124 TACGTGTGTCATAGGCCATG 57.405 50.000 5.01 7.20 35.81 3.66
2680 3687 3.838244 AATACGTGTGTCATAGGCCAT 57.162 42.857 5.01 0.00 0.00 4.40
2681 3688 4.948341 ATAATACGTGTGTCATAGGCCA 57.052 40.909 5.01 0.00 0.00 5.36
2682 3689 6.022163 AGTATAATACGTGTGTCATAGGCC 57.978 41.667 0.00 0.00 0.00 5.19
2683 3690 6.910995 AGAGTATAATACGTGTGTCATAGGC 58.089 40.000 0.00 0.00 0.00 3.93
2684 3691 8.325421 AGAGAGTATAATACGTGTGTCATAGG 57.675 38.462 0.00 0.00 0.00 2.57
2704 3711 5.059833 GGGTAGTATCATGCCAAAAGAGAG 58.940 45.833 0.00 0.00 0.00 3.20
2708 3715 3.316308 GCAGGGTAGTATCATGCCAAAAG 59.684 47.826 8.90 0.00 0.00 2.27
2712 3719 1.506025 TGCAGGGTAGTATCATGCCA 58.494 50.000 16.88 3.20 36.04 4.92
2728 3736 2.068519 GTGTCATGTTCTGTCGATGCA 58.931 47.619 0.00 0.00 0.00 3.96
2768 3784 0.606401 CGGGGCATAGCATTTCCGAT 60.606 55.000 0.00 0.00 39.83 4.18
2772 3788 1.507141 CCGTCGGGGCATAGCATTTC 61.507 60.000 2.34 0.00 0.00 2.17
2785 3801 2.195567 TTATAGGTCGGGCCGTCGG 61.196 63.158 27.32 6.99 43.70 4.79
2786 3802 1.008079 GTTATAGGTCGGGCCGTCG 60.008 63.158 27.32 0.00 43.70 5.12
2787 3803 1.609208 TAGTTATAGGTCGGGCCGTC 58.391 55.000 27.32 21.00 43.70 4.79
2788 3804 1.683385 GTTAGTTATAGGTCGGGCCGT 59.317 52.381 27.32 9.60 43.70 5.68
2789 3805 1.959282 AGTTAGTTATAGGTCGGGCCG 59.041 52.381 22.51 22.51 43.70 6.13
2790 3806 4.829492 TCTAAGTTAGTTATAGGTCGGGCC 59.171 45.833 9.71 0.00 37.58 5.80
2791 3807 6.396829 TTCTAAGTTAGTTATAGGTCGGGC 57.603 41.667 9.71 0.00 0.00 6.13
2828 3860 2.881539 ATCGCTCACATGGCCACCAG 62.882 60.000 8.16 3.32 36.75 4.00
2829 3861 2.874648 GATCGCTCACATGGCCACCA 62.875 60.000 8.16 0.00 38.19 4.17
2830 3862 2.124570 ATCGCTCACATGGCCACC 60.125 61.111 8.16 0.00 0.00 4.61
2831 3863 2.528743 CGATCGCTCACATGGCCAC 61.529 63.158 8.16 0.00 0.00 5.01
2832 3864 2.202919 CGATCGCTCACATGGCCA 60.203 61.111 8.56 8.56 0.00 5.36
2833 3865 1.953138 CTCGATCGCTCACATGGCC 60.953 63.158 11.09 0.00 0.00 5.36
2892 3924 4.497006 CGATCAAATTTGGATCCAGTGAGC 60.497 45.833 15.53 17.14 38.31 4.26
2893 3925 4.877823 TCGATCAAATTTGGATCCAGTGAG 59.122 41.667 15.53 5.80 38.31 3.51
2894 3926 4.842574 TCGATCAAATTTGGATCCAGTGA 58.157 39.130 15.53 16.44 38.31 3.41
2918 3987 4.330074 GGTGTCATTATCAGTGTTTCCTCG 59.670 45.833 0.00 0.00 0.00 4.63
2927 3996 3.706594 ACGGAGATGGTGTCATTATCAGT 59.293 43.478 0.00 0.00 32.98 3.41
2943 4012 1.028130 CAGCAGAGATGCTACGGAGA 58.972 55.000 0.00 0.00 44.30 3.71
2945 4014 1.439228 GCAGCAGAGATGCTACGGA 59.561 57.895 1.86 0.00 44.30 4.69
3002 4076 0.953960 GACCCTACCACTTGCCAACG 60.954 60.000 0.00 0.00 0.00 4.10
3024 4098 6.039941 GCTAGTCTTATACTCACTCATGGTGT 59.960 42.308 12.26 1.21 45.50 4.16
3027 4101 5.536538 TGGCTAGTCTTATACTCACTCATGG 59.463 44.000 0.00 0.00 39.80 3.66
3030 4104 5.506708 TGTGGCTAGTCTTATACTCACTCA 58.493 41.667 0.00 0.00 39.80 3.41
3040 4114 4.408276 ACTCTTCACTGTGGCTAGTCTTA 58.592 43.478 8.11 0.00 0.00 2.10
3042 4116 2.883026 ACTCTTCACTGTGGCTAGTCT 58.117 47.619 8.11 0.00 0.00 3.24
3043 4117 4.022242 TGTTACTCTTCACTGTGGCTAGTC 60.022 45.833 8.11 0.00 0.00 2.59
3044 4118 3.895656 TGTTACTCTTCACTGTGGCTAGT 59.104 43.478 8.11 10.69 0.00 2.57
3045 4119 4.521130 TGTTACTCTTCACTGTGGCTAG 57.479 45.455 8.11 5.44 0.00 3.42
3047 4121 5.683876 ATATGTTACTCTTCACTGTGGCT 57.316 39.130 8.11 0.00 0.00 4.75
3049 4123 8.904834 ACTAGTATATGTTACTCTTCACTGTGG 58.095 37.037 8.11 0.00 0.00 4.17
3081 4155 9.474920 GTAGTAACATAGTCTAGAGATACGTGT 57.525 37.037 0.00 0.00 0.00 4.49
3093 4167 8.475639 CCCACTGTAAATGTAGTAACATAGTCT 58.524 37.037 0.00 0.00 45.79 3.24
3094 4168 8.255905 ACCCACTGTAAATGTAGTAACATAGTC 58.744 37.037 0.00 0.00 45.79 2.59
3096 4170 9.745880 CTACCCACTGTAAATGTAGTAACATAG 57.254 37.037 0.00 0.00 45.79 2.23
3099 4173 7.543359 ACTACCCACTGTAAATGTAGTAACA 57.457 36.000 0.00 0.00 40.07 2.41
3109 4183 9.275398 CACACTTAAATTACTACCCACTGTAAA 57.725 33.333 0.00 0.00 33.21 2.01
3110 4184 8.649591 TCACACTTAAATTACTACCCACTGTAA 58.350 33.333 0.00 0.00 33.87 2.41
3111 4185 8.192743 TCACACTTAAATTACTACCCACTGTA 57.807 34.615 0.00 0.00 0.00 2.74
3114 4188 9.662947 GTTATCACACTTAAATTACTACCCACT 57.337 33.333 0.00 0.00 0.00 4.00
3128 4202 8.334263 TGAATCTTTGCATGTTATCACACTTA 57.666 30.769 0.00 0.00 35.03 2.24
3129 4203 7.218228 TGAATCTTTGCATGTTATCACACTT 57.782 32.000 0.00 0.00 35.03 3.16
3130 4204 6.822667 TGAATCTTTGCATGTTATCACACT 57.177 33.333 0.00 0.00 35.03 3.55
3131 4205 8.470040 AAATGAATCTTTGCATGTTATCACAC 57.530 30.769 0.00 0.00 35.03 3.82
3160 4234 8.874156 TCTCAATGCAATATGAGTCTATAACCT 58.126 33.333 20.36 0.00 42.86 3.50
3161 4235 8.930760 GTCTCAATGCAATATGAGTCTATAACC 58.069 37.037 20.36 4.05 42.86 2.85
3162 4236 9.481340 TGTCTCAATGCAATATGAGTCTATAAC 57.519 33.333 20.36 13.54 42.86 1.89
3164 4238 9.649167 CATGTCTCAATGCAATATGAGTCTATA 57.351 33.333 20.36 6.88 42.86 1.31
3165 4239 8.155510 ACATGTCTCAATGCAATATGAGTCTAT 58.844 33.333 20.36 13.30 42.86 1.98
3167 4241 6.354938 ACATGTCTCAATGCAATATGAGTCT 58.645 36.000 20.36 9.05 42.86 3.24
3168 4242 6.615264 ACATGTCTCAATGCAATATGAGTC 57.385 37.500 20.36 16.98 42.86 3.36
3169 4243 8.565416 CATTACATGTCTCAATGCAATATGAGT 58.435 33.333 20.36 9.55 42.86 3.41
3170 4244 8.565416 ACATTACATGTCTCAATGCAATATGAG 58.435 33.333 16.34 17.01 39.92 2.90
3171 4245 8.454570 ACATTACATGTCTCAATGCAATATGA 57.545 30.769 16.34 0.00 39.92 2.15
3174 4248 9.171877 TGTAACATTACATGTCTCAATGCAATA 57.828 29.630 16.34 7.63 44.07 1.90
3175 4249 8.054152 TGTAACATTACATGTCTCAATGCAAT 57.946 30.769 16.34 8.37 44.07 3.56
3176 4250 7.174772 ACTGTAACATTACATGTCTCAATGCAA 59.825 33.333 16.34 5.55 44.07 4.08
3179 4253 9.973246 GTTACTGTAACATTACATGTCTCAATG 57.027 33.333 22.30 15.26 44.07 2.82
3180 4254 9.944376 AGTTACTGTAACATTACATGTCTCAAT 57.056 29.630 27.12 0.00 44.07 2.57
3183 4257 9.021863 GCTAGTTACTGTAACATTACATGTCTC 57.978 37.037 27.12 1.55 44.07 3.36
3184 4258 8.750298 AGCTAGTTACTGTAACATTACATGTCT 58.250 33.333 27.12 9.43 44.07 3.41
3202 4276 9.512588 AGACAGTTGTAGTAACTTAGCTAGTTA 57.487 33.333 10.09 10.09 45.22 2.24
3204 4278 7.999450 AGACAGTTGTAGTAACTTAGCTAGT 57.001 36.000 0.00 0.00 39.32 2.57
3205 4279 9.344309 GAAAGACAGTTGTAGTAACTTAGCTAG 57.656 37.037 0.00 0.00 0.00 3.42
3206 4280 9.075678 AGAAAGACAGTTGTAGTAACTTAGCTA 57.924 33.333 0.00 0.00 0.00 3.32
3207 4281 7.953752 AGAAAGACAGTTGTAGTAACTTAGCT 58.046 34.615 0.00 0.00 0.00 3.32
3208 4282 7.328982 GGAGAAAGACAGTTGTAGTAACTTAGC 59.671 40.741 0.00 0.00 0.00 3.09
3209 4283 8.578151 AGGAGAAAGACAGTTGTAGTAACTTAG 58.422 37.037 0.00 0.00 0.00 2.18
3210 4284 8.474710 AGGAGAAAGACAGTTGTAGTAACTTA 57.525 34.615 0.00 0.00 0.00 2.24
3211 4285 7.069578 TGAGGAGAAAGACAGTTGTAGTAACTT 59.930 37.037 0.00 0.00 0.00 2.66
3212 4286 6.550108 TGAGGAGAAAGACAGTTGTAGTAACT 59.450 38.462 0.00 0.00 0.00 2.24
3213 4287 6.746120 TGAGGAGAAAGACAGTTGTAGTAAC 58.254 40.000 0.00 0.00 0.00 2.50
3214 4288 6.971726 TGAGGAGAAAGACAGTTGTAGTAA 57.028 37.500 0.00 0.00 0.00 2.24
3215 4289 7.540474 AATGAGGAGAAAGACAGTTGTAGTA 57.460 36.000 0.00 0.00 0.00 1.82
3216 4290 6.426646 AATGAGGAGAAAGACAGTTGTAGT 57.573 37.500 0.00 0.00 0.00 2.73
3217 4291 9.442047 AATTAATGAGGAGAAAGACAGTTGTAG 57.558 33.333 0.00 0.00 0.00 2.74
3218 4292 9.436957 GAATTAATGAGGAGAAAGACAGTTGTA 57.563 33.333 0.00 0.00 0.00 2.41
3219 4293 7.939039 TGAATTAATGAGGAGAAAGACAGTTGT 59.061 33.333 0.00 0.00 0.00 3.32
3220 4294 8.327941 TGAATTAATGAGGAGAAAGACAGTTG 57.672 34.615 0.00 0.00 0.00 3.16
3221 4295 9.525826 AATGAATTAATGAGGAGAAAGACAGTT 57.474 29.630 0.00 0.00 0.00 3.16
3222 4296 8.954350 CAATGAATTAATGAGGAGAAAGACAGT 58.046 33.333 0.00 0.00 0.00 3.55
3223 4297 8.954350 ACAATGAATTAATGAGGAGAAAGACAG 58.046 33.333 0.00 0.00 0.00 3.51
3224 4298 8.868522 ACAATGAATTAATGAGGAGAAAGACA 57.131 30.769 0.00 0.00 0.00 3.41
3225 4299 8.950210 TGACAATGAATTAATGAGGAGAAAGAC 58.050 33.333 0.00 0.00 0.00 3.01
3226 4300 8.950210 GTGACAATGAATTAATGAGGAGAAAGA 58.050 33.333 0.00 0.00 0.00 2.52
3227 4301 8.733458 TGTGACAATGAATTAATGAGGAGAAAG 58.267 33.333 0.00 0.00 0.00 2.62
3228 4302 8.634335 TGTGACAATGAATTAATGAGGAGAAA 57.366 30.769 0.00 0.00 0.00 2.52
3229 4303 8.812513 ATGTGACAATGAATTAATGAGGAGAA 57.187 30.769 0.00 0.00 0.00 2.87
3230 4304 9.904198 TTATGTGACAATGAATTAATGAGGAGA 57.096 29.630 0.00 0.00 0.00 3.71
3232 4306 8.623903 GCTTATGTGACAATGAATTAATGAGGA 58.376 33.333 0.00 0.00 0.00 3.71
3233 4307 8.407832 TGCTTATGTGACAATGAATTAATGAGG 58.592 33.333 0.00 0.00 0.00 3.86
3234 4308 9.791820 TTGCTTATGTGACAATGAATTAATGAG 57.208 29.630 0.00 0.00 0.00 2.90
3257 4331 3.311966 GAGTCCAACTCAGCAAATTTGC 58.688 45.455 31.36 31.36 44.45 3.68
3271 4345 4.350368 TCAGCAGTAACATTGAGTCCAA 57.650 40.909 0.00 0.00 36.61 3.53
3275 4349 6.525629 AGTAACTTCAGCAGTAACATTGAGT 58.474 36.000 0.00 0.00 32.94 3.41
3277 4351 5.932303 GGAGTAACTTCAGCAGTAACATTGA 59.068 40.000 0.00 0.00 32.94 2.57
3278 4352 5.122396 GGGAGTAACTTCAGCAGTAACATTG 59.878 44.000 0.00 0.00 32.94 2.82
3280 4354 4.286032 TGGGAGTAACTTCAGCAGTAACAT 59.714 41.667 0.00 0.00 32.94 2.71
3281 4355 3.644265 TGGGAGTAACTTCAGCAGTAACA 59.356 43.478 0.00 0.00 32.94 2.41
3282 4356 3.995048 GTGGGAGTAACTTCAGCAGTAAC 59.005 47.826 0.00 0.00 32.94 2.50
3283 4357 3.901844 AGTGGGAGTAACTTCAGCAGTAA 59.098 43.478 0.00 0.00 32.94 2.24
3284 4358 3.258372 CAGTGGGAGTAACTTCAGCAGTA 59.742 47.826 0.00 0.00 32.94 2.74
3287 4361 2.047061 ACAGTGGGAGTAACTTCAGCA 58.953 47.619 0.00 0.00 0.00 4.41
3288 4362 2.037251 TCACAGTGGGAGTAACTTCAGC 59.963 50.000 0.00 0.00 0.00 4.26
3289 4363 3.322254 AGTCACAGTGGGAGTAACTTCAG 59.678 47.826 0.00 0.00 0.00 3.02
3291 4365 4.523558 ACTAGTCACAGTGGGAGTAACTTC 59.476 45.833 11.10 0.00 0.00 3.01
3292 4366 4.481072 ACTAGTCACAGTGGGAGTAACTT 58.519 43.478 11.10 0.00 0.00 2.66
3293 4367 4.080687 GACTAGTCACAGTGGGAGTAACT 58.919 47.826 18.20 0.68 0.00 2.24
3294 4368 4.080687 AGACTAGTCACAGTGGGAGTAAC 58.919 47.826 24.44 8.29 0.00 2.50
3295 4369 4.383931 AGACTAGTCACAGTGGGAGTAA 57.616 45.455 24.44 0.00 0.00 2.24
3297 4371 2.982339 AGACTAGTCACAGTGGGAGT 57.018 50.000 24.44 8.06 0.00 3.85
3298 4372 4.381079 GCTTTAGACTAGTCACAGTGGGAG 60.381 50.000 24.44 10.92 0.00 4.30
3299 4373 3.510360 GCTTTAGACTAGTCACAGTGGGA 59.490 47.826 24.44 0.00 0.00 4.37
3300 4374 3.258372 TGCTTTAGACTAGTCACAGTGGG 59.742 47.826 24.44 8.76 0.00 4.61
3302 4376 4.387256 GCTTGCTTTAGACTAGTCACAGTG 59.613 45.833 24.44 11.16 0.00 3.66
3303 4377 4.039245 TGCTTGCTTTAGACTAGTCACAGT 59.961 41.667 24.44 6.62 0.00 3.55
3304 4378 4.560128 TGCTTGCTTTAGACTAGTCACAG 58.440 43.478 24.44 16.48 0.00 3.66
3306 4380 4.201763 GCATGCTTGCTTTAGACTAGTCAC 60.202 45.833 24.44 8.90 45.77 3.67
3307 4381 3.935203 GCATGCTTGCTTTAGACTAGTCA 59.065 43.478 24.44 8.16 45.77 3.41
3308 4382 4.528531 GCATGCTTGCTTTAGACTAGTC 57.471 45.455 15.41 15.41 45.77 2.59
3332 4406 5.129320 TGGAGCAAGAGATAAGAACATGCTA 59.871 40.000 0.00 0.00 42.24 3.49
3336 4410 4.820716 GCATGGAGCAAGAGATAAGAACAT 59.179 41.667 0.00 0.00 44.79 2.71
3338 4412 4.809815 GCATGGAGCAAGAGATAAGAAC 57.190 45.455 0.00 0.00 44.79 3.01
3373 5136 4.796495 GTTGCCGGCCGGGAGAAT 62.796 66.667 43.31 0.00 36.83 2.40
3381 5144 3.959991 GAGAGGTGAGTTGCCGGCC 62.960 68.421 26.77 9.73 0.00 6.13
3443 5206 8.678199 AGTCTTTCACCTTTTCTACTTTTTCTG 58.322 33.333 0.00 0.00 0.00 3.02
3487 5303 4.379186 CCGTCAAACGATGAGTAGTACTGT 60.379 45.833 7.76 0.00 46.05 3.55
3488 5304 4.096311 CCGTCAAACGATGAGTAGTACTG 58.904 47.826 7.76 0.00 46.05 2.74
3563 5587 3.525059 CGACAAGCAAAAGCGTTGA 57.475 47.368 7.29 0.00 0.00 3.18
3574 5598 2.201885 CGAACGAACGCGACAAGC 60.202 61.111 15.93 0.00 41.64 4.01
3575 5599 2.464189 CCGAACGAACGCGACAAG 59.536 61.111 15.93 3.31 41.64 3.16
3576 5600 3.694394 GCCGAACGAACGCGACAA 61.694 61.111 15.93 0.00 41.64 3.18
3593 5622 4.776322 TGCCTGGAATCCGGTGCG 62.776 66.667 7.43 0.00 31.70 5.34
3624 5653 2.958355 CCACATGTTTGGACTTTGGAGT 59.042 45.455 0.00 0.00 39.24 3.85
3625 5654 2.958355 ACCACATGTTTGGACTTTGGAG 59.042 45.455 9.25 0.00 39.24 3.86
3626 5655 2.692557 CACCACATGTTTGGACTTTGGA 59.307 45.455 9.25 0.00 39.24 3.53
3627 5656 2.692557 TCACCACATGTTTGGACTTTGG 59.307 45.455 9.25 0.75 39.24 3.28
3628 5657 4.589216 ATCACCACATGTTTGGACTTTG 57.411 40.909 9.25 0.00 39.24 2.77
3629 5658 6.267471 ACATTATCACCACATGTTTGGACTTT 59.733 34.615 9.25 0.00 39.24 2.66
3630 5659 5.774690 ACATTATCACCACATGTTTGGACTT 59.225 36.000 9.25 0.00 39.24 3.01
3631 5660 5.183713 CACATTATCACCACATGTTTGGACT 59.816 40.000 9.25 0.00 39.24 3.85
3632 5661 5.048083 ACACATTATCACCACATGTTTGGAC 60.048 40.000 9.25 0.00 39.24 4.02
3676 5705 2.126657 GCGCGCTAGCTAGCCTAG 60.127 66.667 34.27 26.15 46.34 3.02
3783 6160 2.676121 CGATGGCACCAAAGGGCA 60.676 61.111 0.00 0.00 45.36 5.36
3803 6243 1.568504 ACCCCTTCAACGATCAGCTA 58.431 50.000 0.00 0.00 0.00 3.32
3809 6249 1.990327 ACCCTAAACCCCTTCAACGAT 59.010 47.619 0.00 0.00 0.00 3.73
3810 6250 1.072648 CACCCTAAACCCCTTCAACGA 59.927 52.381 0.00 0.00 0.00 3.85
3816 6256 2.673258 CAAACACACCCTAAACCCCTT 58.327 47.619 0.00 0.00 0.00 3.95
3837 6277 2.886081 ACTTTCGAGCTCATGCACTAG 58.114 47.619 15.40 3.29 42.74 2.57
3852 6305 6.541111 AAGTGGATTGAGTACGAAACTTTC 57.459 37.500 0.00 0.00 39.07 2.62
3855 6308 6.300354 CAAAAGTGGATTGAGTACGAAACT 57.700 37.500 0.00 0.00 42.80 2.66
3886 6368 4.941873 TCTCTCTTTGTGCATACTACGAGA 59.058 41.667 0.00 0.00 35.65 4.04
3894 6376 4.065088 GTGGTGTTCTCTCTTTGTGCATA 58.935 43.478 0.00 0.00 0.00 3.14
3941 6424 2.098489 GCCGCTTACTTTGCTCGC 59.902 61.111 0.00 0.00 0.00 5.03
3947 6430 1.519408 AACATGTCGCCGCTTACTTT 58.481 45.000 0.00 0.00 0.00 2.66
4234 6742 7.928706 CCGGATTAGTCTTGTAGATGAATTTCT 59.071 37.037 0.00 0.00 0.00 2.52
4235 6743 7.711339 ACCGGATTAGTCTTGTAGATGAATTTC 59.289 37.037 9.46 0.00 0.00 2.17
4238 6746 6.732896 ACCGGATTAGTCTTGTAGATGAAT 57.267 37.500 9.46 0.00 0.00 2.57
4275 7056 8.307582 AGTATTGCAGTCCTTAGTAGTATTGT 57.692 34.615 0.00 0.00 0.00 2.71
4300 7081 2.539338 GCCAGCGAACGGTTGTTGA 61.539 57.895 6.05 0.00 38.78 3.18
4308 7089 3.197790 CATCCTGGCCAGCGAACG 61.198 66.667 28.39 13.51 0.00 3.95
4341 7122 0.179029 AACACTAAACTGCCAGCCGT 60.179 50.000 0.00 0.00 0.00 5.68
4347 7128 3.191371 CCATCTCCAAACACTAAACTGCC 59.809 47.826 0.00 0.00 0.00 4.85
4421 7203 7.223584 TCAAGATCTGACAGTGGTAATTTTCA 58.776 34.615 0.00 0.00 0.00 2.69
4434 7216 5.820404 AGCCATATGATCAAGATCTGACA 57.180 39.130 3.65 0.00 36.69 3.58
4484 7266 0.331278 ATCTGGCGACCATTTCCCAA 59.669 50.000 0.00 0.00 30.82 4.12
4487 7269 6.316390 CCTAATATTATCTGGCGACCATTTCC 59.684 42.308 0.00 0.00 30.82 3.13
4493 7275 4.820894 ACCCTAATATTATCTGGCGACC 57.179 45.455 0.00 0.00 0.00 4.79
4506 7288 9.270707 ACCATGTTGTTTAGTAGTACCCTAATA 57.729 33.333 0.00 0.00 0.00 0.98
4548 7330 1.533625 GTTGGAGCCTGTTATGCACA 58.466 50.000 0.00 0.00 0.00 4.57
4560 7342 0.693049 TTCTCCTTGAGGGTTGGAGC 59.307 55.000 0.00 0.00 45.04 4.70
4568 7350 5.130145 AGGATATCACTGTTTCTCCTTGAGG 59.870 44.000 4.83 0.00 28.77 3.86
4640 7422 4.227134 CGGTCTCTGCATCGGGGG 62.227 72.222 0.00 0.00 0.00 5.40
4644 7426 4.227134 CCCCCGGTCTCTGCATCG 62.227 72.222 0.00 0.00 0.00 3.84
4745 7692 4.808364 TGCCACAAGTAAAAGCAACAATTC 59.192 37.500 0.00 0.00 0.00 2.17
4846 8321 2.472695 TACTGTGCAGTTGGGTGATC 57.527 50.000 10.28 0.00 42.54 2.92
4847 8322 2.305635 TGATACTGTGCAGTTGGGTGAT 59.694 45.455 10.28 0.00 42.54 3.06
4848 8323 1.696884 TGATACTGTGCAGTTGGGTGA 59.303 47.619 10.28 0.00 42.54 4.02
4849 8324 2.183478 TGATACTGTGCAGTTGGGTG 57.817 50.000 10.28 0.00 42.54 4.61
4850 8325 2.949177 TTGATACTGTGCAGTTGGGT 57.051 45.000 10.28 0.00 42.54 4.51
4863 8338 9.274065 GAAAATACGGTCAGTTTCATTTGATAC 57.726 33.333 6.34 0.00 33.76 2.24
4869 8347 8.674607 GGAATAGAAAATACGGTCAGTTTCATT 58.325 33.333 11.37 9.25 35.50 2.57
4872 8351 7.605410 TGGAATAGAAAATACGGTCAGTTTC 57.395 36.000 0.00 0.00 33.75 2.78
4891 8370 7.062957 CCACTAGGTCCTGATAAAAATGGAAT 58.937 38.462 0.00 0.00 0.00 3.01
4939 8418 1.384191 GATGTTCACCCCCTTGCCT 59.616 57.895 0.00 0.00 0.00 4.75
4948 8427 2.993899 CACCTCGTACTTGATGTTCACC 59.006 50.000 0.00 0.00 0.00 4.02
4981 8460 2.271173 CCGGCCTTGTACCCCTTC 59.729 66.667 0.00 0.00 0.00 3.46
5068 8547 2.602267 TCGGACTCGGGCTGGAAA 60.602 61.111 0.00 0.00 36.95 3.13
5190 8685 6.094881 CAGGAACCAACTAAGTCTTTCACAAA 59.905 38.462 0.00 0.00 0.00 2.83
5191 8686 5.588648 CAGGAACCAACTAAGTCTTTCACAA 59.411 40.000 0.00 0.00 0.00 3.33
5205 8700 7.462571 ACAAATTATTAGACCAGGAACCAAC 57.537 36.000 0.00 0.00 0.00 3.77
5207 8702 9.184523 CATAACAAATTATTAGACCAGGAACCA 57.815 33.333 0.00 0.00 0.00 3.67
5208 8703 9.185680 ACATAACAAATTATTAGACCAGGAACC 57.814 33.333 0.00 0.00 0.00 3.62
5230 8733 8.270080 TCCGAATTAACTGCATAACAAACATA 57.730 30.769 0.00 0.00 0.00 2.29
5231 8734 7.151999 TCCGAATTAACTGCATAACAAACAT 57.848 32.000 0.00 0.00 0.00 2.71
5240 8744 4.517285 ACACTCATCCGAATTAACTGCAT 58.483 39.130 0.00 0.00 0.00 3.96
5283 8787 7.680730 ACTTGAAATGGTAGTCTAGTGACATT 58.319 34.615 0.00 0.00 45.20 2.71
5292 8796 5.376625 TGCTCAAACTTGAAATGGTAGTCT 58.623 37.500 0.00 0.00 36.64 3.24
5425 9132 7.589993 AGATGTAAAAATCCCCAAGAGATCAT 58.410 34.615 0.00 0.00 0.00 2.45
5432 9139 5.127682 CCTGGAAGATGTAAAAATCCCCAAG 59.872 44.000 0.00 0.00 34.07 3.61
5445 9152 2.670148 GGCCGTCCCTGGAAGATGT 61.670 63.158 0.00 0.00 34.07 3.06
5460 9167 1.122019 ATATCCTCCAGACACCGGCC 61.122 60.000 0.00 0.00 0.00 6.13
5499 9206 2.214216 CGTCCTGTCCTTCCACCCA 61.214 63.158 0.00 0.00 0.00 4.51
5512 9219 2.675772 GTCCTCCACCGTCGTCCT 60.676 66.667 0.00 0.00 0.00 3.85
5621 9328 8.437575 TGGTTATTTCTGGTAGAGAAGAAAGTT 58.562 33.333 4.41 0.00 43.59 2.66
5635 9349 5.480073 TCTTGATGGGTTTGGTTATTTCTGG 59.520 40.000 0.00 0.00 0.00 3.86
5759 9488 0.751643 ACAGGTTTGCAGGTCCACAC 60.752 55.000 6.65 0.00 0.00 3.82
5827 9556 6.284459 GTGATGAGTCCTCCCTTATTAAGTG 58.716 44.000 2.88 0.00 0.00 3.16
5845 9574 2.236146 GTGTATCAGTGGGTGGTGATGA 59.764 50.000 0.00 0.00 35.08 2.92
5858 9591 7.223582 GTCAGTCAATAAGATGGTGTGTATCAG 59.776 40.741 0.00 0.00 0.00 2.90
5862 9595 6.353404 TGTCAGTCAATAAGATGGTGTGTA 57.647 37.500 0.00 0.00 0.00 2.90
5899 9632 4.560108 GCTCCAAAATGACACTTTCTGCAT 60.560 41.667 0.00 0.00 0.00 3.96
6112 11230 5.505173 AAGTTCAGTCTTGAAATGTGTGG 57.495 39.130 0.00 0.00 44.49 4.17
6162 11280 9.168451 TGTGACTTTCTTGTGTTAATTAACTGA 57.832 29.630 24.81 15.82 37.12 3.41
6165 11283 9.783256 AAGTGTGACTTTCTTGTGTTAATTAAC 57.217 29.630 19.44 19.44 34.11 2.01
6188 11306 6.064060 TCACCAGATGAAATGAACTGAAAGT 58.936 36.000 0.00 0.00 42.31 2.66
6340 11458 1.327690 ATGCTTCCATGGCTGGCTTG 61.328 55.000 6.96 9.74 42.80 4.01
6357 11475 8.496751 CATCTATCACTTTCACAGCATCTAATG 58.503 37.037 0.00 0.00 0.00 1.90
6432 11550 8.366359 AGATTTTGCTTACTTGTCCCATAATT 57.634 30.769 0.00 0.00 0.00 1.40
6481 11604 9.413611 CGCAGTAATTTCAATTAGCATATATCG 57.586 33.333 0.00 0.00 31.94 2.92
6496 11619 9.152121 AACCCGTAGTTTGTACGCAGTAATTTC 62.152 40.741 0.00 0.00 39.64 2.17
6497 11620 7.455836 AACCCGTAGTTTGTACGCAGTAATTT 61.456 38.462 0.00 0.00 39.64 1.82
6518 11641 3.614159 ACTAGAAAACGCGAAAAACCC 57.386 42.857 15.93 0.00 0.00 4.11
6521 11644 6.084925 TGACAAAACTAGAAAACGCGAAAAA 58.915 32.000 15.93 0.00 0.00 1.94
6645 11768 4.980573 AGATGTAGTACCCTTTGTTTGCA 58.019 39.130 0.00 0.00 0.00 4.08
6780 11908 3.258123 GCCATTTGTCACTGGTAACCATT 59.742 43.478 0.00 0.00 34.86 3.16
6784 11912 1.877443 ACGCCATTTGTCACTGGTAAC 59.123 47.619 3.23 0.00 34.86 2.50
6785 11913 1.876799 CACGCCATTTGTCACTGGTAA 59.123 47.619 3.23 0.00 34.86 2.85
6787 11915 1.795170 GCACGCCATTTGTCACTGGT 61.795 55.000 3.23 0.00 34.86 4.00
6788 11916 1.081242 GCACGCCATTTGTCACTGG 60.081 57.895 0.00 0.00 35.53 4.00
6789 11917 0.030504 TTGCACGCCATTTGTCACTG 59.969 50.000 0.00 0.00 0.00 3.66
6790 11918 0.311790 CTTGCACGCCATTTGTCACT 59.688 50.000 0.00 0.00 0.00 3.41
6799 11927 3.286751 GCCTTCACTTGCACGCCA 61.287 61.111 0.00 0.00 0.00 5.69
6811 11939 1.688884 AGAGCTGGAGAGGGCCTTC 60.689 63.158 7.89 6.80 0.00 3.46
6824 11952 0.749049 TCGATATGTGCAGCAGAGCT 59.251 50.000 0.00 0.00 40.77 4.09
6825 11953 1.793258 ATCGATATGTGCAGCAGAGC 58.207 50.000 0.00 0.00 0.00 4.09
6826 11954 4.741342 TGATATCGATATGTGCAGCAGAG 58.259 43.478 22.37 0.00 0.00 3.35
6827 11955 4.460382 TCTGATATCGATATGTGCAGCAGA 59.540 41.667 22.37 21.01 0.00 4.26
6828 11956 4.741342 TCTGATATCGATATGTGCAGCAG 58.259 43.478 22.37 19.33 0.00 4.24
6829 11957 4.789012 TCTGATATCGATATGTGCAGCA 57.211 40.909 22.37 11.52 0.00 4.41
6830 11958 4.925646 TGTTCTGATATCGATATGTGCAGC 59.074 41.667 22.37 11.38 0.00 5.25
7119 12270 2.799412 GCTGCTGAACATCCTCTATTCG 59.201 50.000 0.00 0.00 0.00 3.34
7143 12296 2.634982 ACACAACACAACTGCACAAG 57.365 45.000 0.00 0.00 0.00 3.16
7278 12442 5.182001 GGCTACATGTCTGAATTTTGACTGT 59.818 40.000 0.00 13.14 34.57 3.55
7323 12487 7.064966 CCCACGTTAAGTAAAAGGTTATACCAG 59.935 40.741 0.00 0.00 41.95 4.00
7386 12553 2.166459 CGGCATCACTACTTCTCCTCAA 59.834 50.000 0.00 0.00 0.00 3.02
7452 12619 9.947433 TCAAGCATTTAATCAATTCCATTTTCT 57.053 25.926 0.00 0.00 0.00 2.52
7510 13293 7.171653 TCATGCAATATGTTAATTCCCGGATA 58.828 34.615 0.73 0.00 0.00 2.59
7533 13316 9.474920 AAAAATTATGAACTTCTTTCGCATTCA 57.525 25.926 0.00 0.00 36.97 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.