Multiple sequence alignment - TraesCS3A01G492900

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G492900 chr3A 100.000 8423 0 0 1 8423 719647116 719638694 0.000000e+00 15555.0
1 TraesCS3A01G492900 chr3A 86.957 138 16 2 6057 6192 51474556 51474419 4.070000e-33 154.0
2 TraesCS3A01G492900 chr3A 92.754 69 4 1 4114 4181 731092697 731092765 1.930000e-16 99.0
3 TraesCS3A01G492900 chr3A 93.750 64 3 1 4119 4181 738856947 738857010 2.500000e-15 95.3
4 TraesCS3A01G492900 chr3A 91.176 68 4 2 4113 4179 727393801 727393735 3.240000e-14 91.6
5 TraesCS3A01G492900 chr3A 77.019 161 31 6 4951 5106 713563998 713564157 4.190000e-13 87.9
6 TraesCS3A01G492900 chr3D 96.109 2133 58 10 4183 6307 589761140 589759025 0.000000e+00 3456.0
7 TraesCS3A01G492900 chr3D 92.756 1974 69 31 6302 8225 589758944 589756995 0.000000e+00 2785.0
8 TraesCS3A01G492900 chr3D 92.271 1656 70 19 2373 4007 589762906 589761288 0.000000e+00 2296.0
9 TraesCS3A01G492900 chr3D 86.547 669 32 21 836 1458 589764099 589763443 0.000000e+00 684.0
10 TraesCS3A01G492900 chr3D 88.391 379 21 7 1560 1931 589763374 589763012 1.300000e-117 435.0
11 TraesCS3A01G492900 chr3D 86.322 329 38 5 4 331 589765270 589764948 1.350000e-92 351.0
12 TraesCS3A01G492900 chr3D 84.358 358 40 7 366 707 589764831 589764474 3.770000e-88 337.0
13 TraesCS3A01G492900 chr3D 91.981 212 16 1 3912 4122 589761340 589761129 6.390000e-76 296.0
14 TraesCS3A01G492900 chr3D 86.782 174 13 5 8254 8420 589756997 589756827 1.440000e-42 185.0
15 TraesCS3A01G492900 chr3D 86.957 138 16 2 6057 6192 40012206 40012069 4.070000e-33 154.0
16 TraesCS3A01G492900 chr3B 91.313 1439 80 19 2476 3889 788227200 788225782 0.000000e+00 1923.0
17 TraesCS3A01G492900 chr3B 90.323 1426 114 17 4186 5590 788225670 788224248 0.000000e+00 1847.0
18 TraesCS3A01G492900 chr3B 82.637 2298 193 89 81 2316 788229424 788227271 0.000000e+00 1844.0
19 TraesCS3A01G492900 chr3B 88.079 1426 77 31 7007 8379 788223445 788222060 0.000000e+00 1605.0
20 TraesCS3A01G492900 chr3B 84.783 460 44 13 6495 6945 788223921 788223479 1.000000e-118 438.0
21 TraesCS3A01G492900 chr3B 90.000 130 12 1 3996 4124 788225789 788225660 5.230000e-37 167.0
22 TraesCS3A01G492900 chr3B 89.855 69 5 2 3905 3972 672774742 672774675 4.190000e-13 87.9
23 TraesCS3A01G492900 chr3B 86.747 83 6 3 2342 2419 788227282 788227200 4.190000e-13 87.9
24 TraesCS3A01G492900 chr3B 82.812 64 11 0 6058 6121 591367745 591367682 3.280000e-04 58.4
25 TraesCS3A01G492900 chr7D 79.000 200 34 3 4921 5118 593646932 593646739 6.860000e-26 130.0
26 TraesCS3A01G492900 chr7D 81.061 132 16 9 3903 4027 75054770 75054899 6.960000e-16 97.1
27 TraesCS3A01G492900 chr7D 86.364 88 6 5 4111 4193 186317789 186317875 3.240000e-14 91.6
28 TraesCS3A01G492900 chr7D 92.063 63 5 0 3968 4030 234351225 234351163 1.160000e-13 89.8
29 TraesCS3A01G492900 chr7D 89.394 66 7 0 3963 4028 195654044 195654109 5.420000e-12 84.2
30 TraesCS3A01G492900 chr7D 84.091 88 10 4 4127 4212 563610656 563610741 1.950000e-11 82.4
31 TraesCS3A01G492900 chr6D 86.916 107 14 0 4231 4337 159781779 159781673 4.130000e-23 121.0
32 TraesCS3A01G492900 chr6D 92.424 66 4 1 4117 4181 13775803 13775738 9.000000e-15 93.5
33 TraesCS3A01G492900 chr6D 93.220 59 4 0 3905 3963 365711087 365711029 4.190000e-13 87.9
34 TraesCS3A01G492900 chr6A 85.981 107 15 0 4231 4337 218865943 218865837 1.920000e-21 115.0
35 TraesCS3A01G492900 chr2D 85.417 96 14 0 4728 4823 110243232 110243137 5.380000e-17 100.0
36 TraesCS3A01G492900 chr7A 91.176 68 6 0 3963 4030 247257052 247256985 9.000000e-15 93.5
37 TraesCS3A01G492900 chr4B 92.424 66 3 2 4118 4181 388192911 388192976 9.000000e-15 93.5
38 TraesCS3A01G492900 chr1D 91.304 69 4 2 4115 4181 6189938 6190006 9.000000e-15 93.5
39 TraesCS3A01G492900 chr5D 88.312 77 5 4 4118 4192 275702385 275702311 1.160000e-13 89.8
40 TraesCS3A01G492900 chr4D 80.833 120 18 4 3911 4030 489181714 489181828 1.160000e-13 89.8
41 TraesCS3A01G492900 chr4A 89.706 68 6 1 3905 3972 626981492 626981558 1.510000e-12 86.1
42 TraesCS3A01G492900 chr7B 87.324 71 8 1 3902 3972 94635500 94635569 7.010000e-11 80.5
43 TraesCS3A01G492900 chr7B 82.418 91 12 3 3898 3985 616828757 616828846 9.070000e-10 76.8
44 TraesCS3A01G492900 chr5A 88.235 68 7 1 3963 4030 613017671 613017737 7.010000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G492900 chr3A 719638694 719647116 8422 True 15555.000000 15555 100.000000 1 8423 1 chr3A.!!$R2 8422
1 TraesCS3A01G492900 chr3D 589756827 589765270 8443 True 1202.777778 3456 89.501889 4 8420 9 chr3D.!!$R2 8416
2 TraesCS3A01G492900 chr3B 788222060 788229424 7364 True 1130.271429 1923 87.697429 81 8379 7 chr3B.!!$R3 8298

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
591 685 0.030369 CGGTCGATCTAGGGTTTCCG 59.970 60.0 0.00 0.00 38.33 4.30 F
1720 2154 0.168348 CCACGTGTCAGAGACGGTAG 59.832 60.0 22.84 12.46 41.21 3.18 F
2330 2800 0.109723 ATACACAGCCACCAAACCGT 59.890 50.0 0.00 0.00 0.00 4.83 F
3888 4392 0.252761 TTGGGCAAGAGATGATCGCA 59.747 50.0 0.00 0.00 0.00 5.10 F
4182 4730 0.027586 GAACGATGCATACGGCCAAC 59.972 55.0 18.34 0.00 43.89 3.77 F
5867 6431 0.321564 GTGGCCATGTCACAGTGCTA 60.322 55.0 9.72 0.00 38.14 3.49 F
6176 6744 0.320374 TCTGTGCTCTTACCAACCGG 59.680 55.0 0.00 0.00 38.77 5.28 F
6931 7765 0.550914 TCACTTCCCAGTTGCCACTT 59.449 50.0 0.00 0.00 0.00 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1872 2326 0.031994 GTCCAAATTTGCGGTGCAGT 59.968 50.000 12.92 0.00 40.61 4.40 R
3511 4015 2.036604 TCACGTGTGCTACATTGAGGAA 59.963 45.455 16.51 0.00 0.00 3.36 R
4163 4711 0.027586 GTTGGCCGTATGCATCGTTC 59.972 55.000 0.19 2.49 43.89 3.95 R
5841 6405 0.318955 GTGACATGGCCACTGCAAAC 60.319 55.000 8.16 0.00 40.13 2.93 R
6018 6586 0.317854 GTTGAAACGAAGCAGGGTGC 60.318 55.000 0.00 0.00 45.46 5.01 R
7083 7919 0.110867 TGCAAACGATGAACGCGAAG 60.111 50.000 15.93 0.00 46.94 3.79 R
7084 7920 0.383737 GTGCAAACGATGAACGCGAA 60.384 50.000 15.93 0.00 46.94 4.70 R
8326 9225 0.108138 CCGACAGGGAAGATTCGCTT 60.108 55.000 9.23 2.62 46.75 4.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
60 61 1.749334 CTCGGCTCATAGGGTGGTCC 61.749 65.000 0.00 0.00 0.00 4.46
110 111 1.202545 GCGTACCAAATCTCCCCTCTC 60.203 57.143 0.00 0.00 0.00 3.20
111 112 2.108168 CGTACCAAATCTCCCCTCTCA 58.892 52.381 0.00 0.00 0.00 3.27
126 127 4.104738 CCCCTCTCAAAATCCCTATTGCTA 59.895 45.833 0.00 0.00 0.00 3.49
135 136 2.029623 TCCCTATTGCTACTCACGTCC 58.970 52.381 0.00 0.00 0.00 4.79
139 140 2.209838 ATTGCTACTCACGTCCATCG 57.790 50.000 0.00 0.00 46.00 3.84
156 157 2.544844 TCGGGGTAGAGAATTGGAGT 57.455 50.000 0.00 0.00 0.00 3.85
170 171 5.190528 AGAATTGGAGTACAGATCACCACAT 59.809 40.000 0.00 0.00 0.00 3.21
171 172 4.471904 TTGGAGTACAGATCACCACATC 57.528 45.455 0.00 0.00 0.00 3.06
177 178 0.531532 CAGATCACCACATCCTCCGC 60.532 60.000 0.00 0.00 0.00 5.54
203 204 2.634453 CAATTGGGCCCTTCTCAAACTT 59.366 45.455 25.70 0.00 0.00 2.66
215 216 5.068987 CCTTCTCAAACTTGATTTCCCACAA 59.931 40.000 0.00 0.00 36.46 3.33
256 257 6.408858 TCAATTTCGAAAGACTAGATGTGC 57.591 37.500 16.80 0.00 41.84 4.57
261 262 3.439129 TCGAAAGACTAGATGTGCGAAGA 59.561 43.478 0.00 0.00 33.31 2.87
264 265 4.792521 AAGACTAGATGTGCGAAGAAGT 57.207 40.909 0.00 0.00 0.00 3.01
278 279 5.404366 TGCGAAGAAGTACTTTGATGTGTAC 59.596 40.000 10.02 0.00 41.25 2.90
281 282 5.464030 AGAAGTACTTTGATGTGTACGGT 57.536 39.130 10.02 0.00 42.53 4.83
289 290 1.202592 TGATGTGTACGGTGTGCAACT 60.203 47.619 0.00 0.00 38.04 3.16
292 293 1.227704 TGTACGGTGTGCAACTGGG 60.228 57.895 11.06 0.00 39.74 4.45
311 356 1.527380 TCTTTGGGTCCGTGTTGCC 60.527 57.895 0.00 0.00 0.00 4.52
313 358 1.152652 TTTGGGTCCGTGTTGCCAT 60.153 52.632 0.00 0.00 0.00 4.40
339 384 3.622514 TTTTTGGCACCACGGCTT 58.377 50.000 0.00 0.00 41.89 4.35
358 403 1.165907 TGCTGGCTTCAAGTTCACGG 61.166 55.000 0.00 0.00 0.00 4.94
362 407 1.493311 GCTTCAAGTTCACGGAGCG 59.507 57.895 0.00 0.00 0.00 5.03
364 409 2.215478 CTTCAAGTTCACGGAGCGCG 62.215 60.000 0.00 0.00 0.00 6.86
396 481 2.177580 CACACGGGCGACACTTTGT 61.178 57.895 0.00 0.00 0.00 2.83
442 527 4.330074 GCTACGAGCAGTATCAAACACAAT 59.670 41.667 0.00 0.00 41.89 2.71
465 550 2.580815 CTGAGCCGCCATGTCTCA 59.419 61.111 0.00 0.00 35.74 3.27
565 659 2.092699 CCAGTTGAAGGGAGAAGGGATC 60.093 54.545 0.00 0.00 0.00 3.36
574 668 2.279784 GAAGGGATCTCAGCGCGG 60.280 66.667 8.83 0.00 0.00 6.46
591 685 0.030369 CGGTCGATCTAGGGTTTCCG 59.970 60.000 0.00 0.00 38.33 4.30
662 759 6.078664 TCCACTCTAGGAAGGAAATCTATCC 58.921 44.000 0.00 0.00 33.93 2.59
678 785 3.625897 CCCCACTCCACGTGCTGA 61.626 66.667 10.91 1.73 42.42 4.26
687 794 3.880490 ACTCCACGTGCTGAAATTAAACA 59.120 39.130 10.91 0.00 0.00 2.83
709 816 3.374058 ACAGACTTGCACGCAAATATACC 59.626 43.478 5.87 0.00 35.33 2.73
710 817 2.943033 AGACTTGCACGCAAATATACCC 59.057 45.455 5.87 0.00 35.33 3.69
721 828 5.212194 CGCAAATATACCCAAGAAATTCCG 58.788 41.667 0.00 0.00 0.00 4.30
735 842 6.259550 AGAAATTCCGAAACCAGAATGAAG 57.740 37.500 0.00 0.00 39.69 3.02
740 847 1.879380 CGAAACCAGAATGAAGCACCA 59.121 47.619 0.00 0.00 39.69 4.17
758 865 2.098443 ACCACACGGCAAAAACTACTTG 59.902 45.455 0.00 0.00 34.57 3.16
769 876 5.462068 GCAAAAACTACTTGCCTTTTCGATT 59.538 36.000 0.00 0.00 42.74 3.34
771 878 4.663636 AACTACTTGCCTTTTCGATTCG 57.336 40.909 0.00 0.00 0.00 3.34
778 885 1.095807 CCTTTTCGATTCGCCCTCCC 61.096 60.000 0.00 0.00 0.00 4.30
779 886 0.392461 CTTTTCGATTCGCCCTCCCA 60.392 55.000 0.00 0.00 0.00 4.37
780 887 0.254747 TTTTCGATTCGCCCTCCCAT 59.745 50.000 0.00 0.00 0.00 4.00
781 888 1.124780 TTTCGATTCGCCCTCCCATA 58.875 50.000 0.00 0.00 0.00 2.74
782 889 0.679505 TTCGATTCGCCCTCCCATAG 59.320 55.000 0.00 0.00 0.00 2.23
783 890 1.374758 CGATTCGCCCTCCCATAGC 60.375 63.158 0.00 0.00 0.00 2.97
784 891 1.003233 GATTCGCCCTCCCATAGCC 60.003 63.158 0.00 0.00 0.00 3.93
785 892 1.768684 GATTCGCCCTCCCATAGCCA 61.769 60.000 0.00 0.00 0.00 4.75
786 893 1.136329 ATTCGCCCTCCCATAGCCAT 61.136 55.000 0.00 0.00 0.00 4.40
787 894 1.768684 TTCGCCCTCCCATAGCCATC 61.769 60.000 0.00 0.00 0.00 3.51
818 1184 0.180171 TCCAGCCCACCGATGTATTG 59.820 55.000 0.00 0.00 0.00 1.90
820 1186 1.681780 CCAGCCCACCGATGTATTGTT 60.682 52.381 0.00 0.00 0.00 2.83
821 1187 1.401552 CAGCCCACCGATGTATTGTTG 59.598 52.381 0.00 0.00 0.00 3.33
822 1188 1.004277 AGCCCACCGATGTATTGTTGT 59.996 47.619 0.00 0.00 0.00 3.32
823 1189 2.237643 AGCCCACCGATGTATTGTTGTA 59.762 45.455 0.00 0.00 0.00 2.41
824 1190 2.612212 GCCCACCGATGTATTGTTGTAG 59.388 50.000 0.00 0.00 0.00 2.74
825 1191 3.680475 GCCCACCGATGTATTGTTGTAGA 60.680 47.826 0.00 0.00 0.00 2.59
826 1192 4.119862 CCCACCGATGTATTGTTGTAGAG 58.880 47.826 0.00 0.00 0.00 2.43
827 1193 4.382685 CCCACCGATGTATTGTTGTAGAGT 60.383 45.833 0.00 0.00 0.00 3.24
828 1194 5.163488 CCCACCGATGTATTGTTGTAGAGTA 60.163 44.000 0.00 0.00 0.00 2.59
829 1195 6.334989 CCACCGATGTATTGTTGTAGAGTAA 58.665 40.000 0.00 0.00 0.00 2.24
830 1196 6.814644 CCACCGATGTATTGTTGTAGAGTAAA 59.185 38.462 0.00 0.00 0.00 2.01
831 1197 7.332430 CCACCGATGTATTGTTGTAGAGTAAAA 59.668 37.037 0.00 0.00 0.00 1.52
832 1198 8.166706 CACCGATGTATTGTTGTAGAGTAAAAC 58.833 37.037 0.00 0.00 0.00 2.43
833 1199 7.062605 ACCGATGTATTGTTGTAGAGTAAAACG 59.937 37.037 0.00 0.00 0.00 3.60
834 1200 6.892951 CGATGTATTGTTGTAGAGTAAAACGC 59.107 38.462 0.00 0.00 0.00 4.84
962 1355 0.380733 TCTACTGCCTACGCACATCG 59.619 55.000 0.00 0.00 41.12 3.84
982 1375 2.749441 GCAGGAAGCAGAGCACCC 60.749 66.667 0.00 0.00 44.79 4.61
1021 1414 3.771491 CGTCGTCCTCGTCGTCGT 61.771 66.667 1.33 0.00 41.73 4.34
1025 1418 2.095469 GTCCTCGTCGTCGTCGTC 59.905 66.667 11.41 0.00 38.33 4.20
1026 1419 3.473166 TCCTCGTCGTCGTCGTCG 61.473 66.667 14.18 14.18 46.06 5.12
1027 1420 4.495939 CCTCGTCGTCGTCGTCGG 62.496 72.222 18.80 9.47 45.17 4.79
1132 1525 2.444895 GGATGCCGAGGAGGGAGT 60.445 66.667 0.00 0.00 46.12 3.85
1441 1866 2.686106 GGTACGCCCTCCCTCCAA 60.686 66.667 0.00 0.00 0.00 3.53
1443 1868 3.072468 TACGCCCTCCCTCCAACG 61.072 66.667 0.00 0.00 0.00 4.10
1462 1887 0.326143 GCCTCCCTCTTCCTCTCCTT 60.326 60.000 0.00 0.00 0.00 3.36
1506 1933 2.187946 CCATCCTCGCTCCGCTTT 59.812 61.111 0.00 0.00 0.00 3.51
1545 1975 1.367840 GATCCAATCGAGGGACGGG 59.632 63.158 10.51 0.00 42.82 5.28
1546 1976 2.100879 GATCCAATCGAGGGACGGGG 62.101 65.000 10.51 0.00 42.82 5.73
1547 1977 3.861797 CCAATCGAGGGACGGGGG 61.862 72.222 0.00 0.00 42.82 5.40
1548 1978 2.762459 CAATCGAGGGACGGGGGA 60.762 66.667 0.00 0.00 42.82 4.81
1549 1979 2.762875 AATCGAGGGACGGGGGAC 60.763 66.667 0.00 0.00 42.82 4.46
1716 2150 2.430921 GGCCACGTGTCAGAGACG 60.431 66.667 18.08 18.08 42.62 4.18
1720 2154 0.168348 CCACGTGTCAGAGACGGTAG 59.832 60.000 22.84 12.46 41.21 3.18
1725 2159 2.439701 TCAGAGACGGTAGCGGGG 60.440 66.667 19.72 3.15 0.00 5.73
1750 2184 4.721132 AGATTTTTCCTGGTGGTTCGTTA 58.279 39.130 0.00 0.00 34.23 3.18
1839 2288 2.290122 CTAGTGGACGCCTGAGCTGG 62.290 65.000 0.00 0.00 36.60 4.85
1840 2289 2.781431 TAGTGGACGCCTGAGCTGGA 62.781 60.000 0.00 0.00 36.60 3.86
1842 2291 3.695606 GGACGCCTGAGCTGGACA 61.696 66.667 0.00 0.00 36.60 4.02
1844 2293 1.078848 GACGCCTGAGCTGGACATT 60.079 57.895 0.00 0.00 36.60 2.71
1845 2294 0.674895 GACGCCTGAGCTGGACATTT 60.675 55.000 0.00 0.00 36.60 2.32
1846 2295 0.250901 ACGCCTGAGCTGGACATTTT 60.251 50.000 0.00 0.00 36.60 1.82
1847 2296 0.883833 CGCCTGAGCTGGACATTTTT 59.116 50.000 0.00 0.00 36.60 1.94
1872 2326 6.430864 TCTGATAGCCAAAATCCAAATGGTA 58.569 36.000 0.00 0.00 36.57 3.25
1907 2361 1.079750 GACTCCACTCGCCCTGTTC 60.080 63.158 0.00 0.00 0.00 3.18
1937 2398 1.529010 CTTGCTGCCAGTGGGTCAA 60.529 57.895 12.15 3.68 36.17 3.18
1942 2403 0.968901 CTGCCAGTGGGTCAATGCAT 60.969 55.000 12.15 0.00 36.17 3.96
1948 2409 2.352821 TGGGTCAATGCATGCTGGC 61.353 57.895 20.33 11.27 0.00 4.85
1952 2413 1.034356 GTCAATGCATGCTGGCCATA 58.966 50.000 20.33 0.00 31.47 2.74
1956 2417 3.896272 TCAATGCATGCTGGCCATAATAA 59.104 39.130 20.33 0.00 31.47 1.40
1972 2434 6.294508 GCCATAATAACTGCATAAAACCCGAT 60.295 38.462 0.00 0.00 0.00 4.18
1974 2436 8.234546 CCATAATAACTGCATAAAACCCGATAC 58.765 37.037 0.00 0.00 0.00 2.24
1975 2437 6.628919 AATAACTGCATAAAACCCGATACC 57.371 37.500 0.00 0.00 0.00 2.73
1976 2438 3.926058 ACTGCATAAAACCCGATACCT 57.074 42.857 0.00 0.00 0.00 3.08
1977 2439 3.541632 ACTGCATAAAACCCGATACCTG 58.458 45.455 0.00 0.00 0.00 4.00
1978 2440 3.199071 ACTGCATAAAACCCGATACCTGA 59.801 43.478 0.00 0.00 0.00 3.86
1979 2441 4.196193 CTGCATAAAACCCGATACCTGAA 58.804 43.478 0.00 0.00 0.00 3.02
1980 2442 4.196193 TGCATAAAACCCGATACCTGAAG 58.804 43.478 0.00 0.00 0.00 3.02
1981 2443 3.003378 GCATAAAACCCGATACCTGAAGC 59.997 47.826 0.00 0.00 0.00 3.86
1982 2444 2.124277 AAAACCCGATACCTGAAGCC 57.876 50.000 0.00 0.00 0.00 4.35
1983 2445 1.286248 AAACCCGATACCTGAAGCCT 58.714 50.000 0.00 0.00 0.00 4.58
1984 2446 0.541863 AACCCGATACCTGAAGCCTG 59.458 55.000 0.00 0.00 0.00 4.85
1985 2447 0.325296 ACCCGATACCTGAAGCCTGA 60.325 55.000 0.00 0.00 0.00 3.86
1986 2448 0.830648 CCCGATACCTGAAGCCTGAA 59.169 55.000 0.00 0.00 0.00 3.02
1987 2449 1.202580 CCCGATACCTGAAGCCTGAAG 60.203 57.143 0.00 0.00 0.00 3.02
2014 2476 1.113788 CCCGAACCCGTATAACCTGA 58.886 55.000 0.00 0.00 0.00 3.86
2018 2480 2.167075 CGAACCCGTATAACCTGAACCT 59.833 50.000 0.00 0.00 0.00 3.50
2020 2482 1.835531 ACCCGTATAACCTGAACCTGG 59.164 52.381 0.00 0.00 0.00 4.45
2025 2487 4.634443 CCGTATAACCTGAACCTGGAAAAG 59.366 45.833 0.00 0.00 0.00 2.27
2027 2489 2.452600 AACCTGAACCTGGAAAAGCA 57.547 45.000 0.00 0.00 0.00 3.91
2028 2490 2.452600 ACCTGAACCTGGAAAAGCAA 57.547 45.000 0.00 0.00 0.00 3.91
2029 2491 2.310538 ACCTGAACCTGGAAAAGCAAG 58.689 47.619 0.00 0.00 0.00 4.01
2030 2492 1.000171 CCTGAACCTGGAAAAGCAAGC 60.000 52.381 0.00 0.00 0.00 4.01
2031 2493 1.682854 CTGAACCTGGAAAAGCAAGCA 59.317 47.619 0.00 0.00 0.00 3.91
2032 2494 1.408702 TGAACCTGGAAAAGCAAGCAC 59.591 47.619 0.00 0.00 0.00 4.40
2033 2495 1.683385 GAACCTGGAAAAGCAAGCACT 59.317 47.619 0.00 0.00 0.00 4.40
2034 2496 2.656947 ACCTGGAAAAGCAAGCACTA 57.343 45.000 0.00 0.00 0.00 2.74
2035 2497 2.230660 ACCTGGAAAAGCAAGCACTAC 58.769 47.619 0.00 0.00 0.00 2.73
2036 2498 2.229792 CCTGGAAAAGCAAGCACTACA 58.770 47.619 0.00 0.00 0.00 2.74
2037 2499 2.821969 CCTGGAAAAGCAAGCACTACAT 59.178 45.455 0.00 0.00 0.00 2.29
2038 2500 3.119708 CCTGGAAAAGCAAGCACTACATC 60.120 47.826 0.00 0.00 0.00 3.06
2039 2501 2.819608 TGGAAAAGCAAGCACTACATCC 59.180 45.455 0.00 0.00 0.00 3.51
2040 2502 2.159517 GGAAAAGCAAGCACTACATCCG 60.160 50.000 0.00 0.00 0.00 4.18
2041 2503 1.453155 AAAGCAAGCACTACATCCGG 58.547 50.000 0.00 0.00 0.00 5.14
2042 2504 0.324943 AAGCAAGCACTACATCCGGT 59.675 50.000 0.00 0.00 0.00 5.28
2043 2505 1.191535 AGCAAGCACTACATCCGGTA 58.808 50.000 0.00 0.00 0.00 4.02
2053 2515 1.821216 ACATCCGGTAGCAGTTTTGG 58.179 50.000 0.00 0.00 0.00 3.28
2054 2516 1.349688 ACATCCGGTAGCAGTTTTGGA 59.650 47.619 0.00 0.00 0.00 3.53
2055 2517 2.224670 ACATCCGGTAGCAGTTTTGGAA 60.225 45.455 0.00 0.00 0.00 3.53
2056 2518 1.886886 TCCGGTAGCAGTTTTGGAAC 58.113 50.000 0.00 0.00 35.97 3.62
2085 2547 3.219281 GGTAGCAGTTTTGGAAACCTGA 58.781 45.455 1.19 0.00 29.04 3.86
2088 2550 4.326504 AGCAGTTTTGGAAACCTGAATG 57.673 40.909 1.19 0.00 29.04 2.67
2090 2552 4.892934 AGCAGTTTTGGAAACCTGAATGTA 59.107 37.500 1.19 0.00 29.04 2.29
2091 2553 5.010012 AGCAGTTTTGGAAACCTGAATGTAG 59.990 40.000 1.19 0.00 29.04 2.74
2110 2572 8.746052 AATGTAGTTCGGGAAATGATTATTGA 57.254 30.769 0.00 0.00 0.00 2.57
2127 2589 9.507329 TGATTATTGAAGCCCACTAGAAATATC 57.493 33.333 0.00 0.00 0.00 1.63
2128 2590 9.732130 GATTATTGAAGCCCACTAGAAATATCT 57.268 33.333 0.00 0.00 39.82 1.98
2132 2594 2.965831 AGCCCACTAGAAATATCTCGCA 59.034 45.455 0.00 0.00 37.10 5.10
2135 2597 4.693283 CCCACTAGAAATATCTCGCACAA 58.307 43.478 0.00 0.00 37.10 3.33
2144 2606 7.765307 AGAAATATCTCGCACAAATGTCATTT 58.235 30.769 4.91 4.91 0.00 2.32
2158 2620 3.333804 TGTCATTTACTCATTCGCTGCA 58.666 40.909 0.00 0.00 0.00 4.41
2165 2627 2.430465 ACTCATTCGCTGCAGAAATGT 58.570 42.857 27.60 15.65 33.43 2.71
2183 2645 7.384660 CAGAAATGTTGTTATTTTTGCCTGCTA 59.615 33.333 0.00 0.00 30.78 3.49
2185 2647 4.555262 TGTTGTTATTTTTGCCTGCTAGC 58.445 39.130 8.10 8.10 0.00 3.42
2193 2661 1.536073 TTGCCTGCTAGCGTCTCACT 61.536 55.000 10.77 0.00 34.65 3.41
2198 2666 0.241213 TGCTAGCGTCTCACTCACAC 59.759 55.000 10.77 0.00 0.00 3.82
2203 2671 1.373497 CGTCTCACTCACACAGGGC 60.373 63.158 0.00 0.00 0.00 5.19
2218 2686 2.032071 GGCGTACCACTTGGCACT 59.968 61.111 0.00 0.00 39.32 4.40
2230 2698 1.952296 CTTGGCACTGGATAGAATGGC 59.048 52.381 0.00 0.00 38.08 4.40
2251 2719 3.381590 GCCTTCTGTTTTTCTTGGACACT 59.618 43.478 0.00 0.00 0.00 3.55
2260 2728 4.600692 TTTCTTGGACACTCATCGAGAA 57.399 40.909 0.00 0.00 33.32 2.87
2261 2729 3.577649 TCTTGGACACTCATCGAGAAC 57.422 47.619 0.00 0.00 33.32 3.01
2293 2763 9.878599 ATTGTTGTAATTAGTTTGAGAAGAACG 57.121 29.630 0.00 0.00 32.38 3.95
2294 2764 7.349711 TGTTGTAATTAGTTTGAGAAGAACGC 58.650 34.615 0.00 0.00 32.38 4.84
2295 2765 6.148270 TGTAATTAGTTTGAGAAGAACGCG 57.852 37.500 3.53 3.53 32.38 6.01
2296 2766 4.663636 AATTAGTTTGAGAAGAACGCGG 57.336 40.909 12.47 0.00 32.38 6.46
2303 2773 2.202756 GAAGAACGCGGCGGAGAT 60.203 61.111 27.37 10.00 0.00 2.75
2311 2781 2.988688 GCGGCGGAGATGGCAAAAA 61.989 57.895 9.78 0.00 0.00 1.94
2312 2782 1.809207 CGGCGGAGATGGCAAAAAT 59.191 52.632 0.00 0.00 0.00 1.82
2313 2783 1.021202 CGGCGGAGATGGCAAAAATA 58.979 50.000 0.00 0.00 0.00 1.40
2314 2784 1.268539 CGGCGGAGATGGCAAAAATAC 60.269 52.381 0.00 0.00 0.00 1.89
2315 2785 1.748493 GGCGGAGATGGCAAAAATACA 59.252 47.619 0.00 0.00 0.00 2.29
2316 2786 2.479560 GGCGGAGATGGCAAAAATACAC 60.480 50.000 0.00 0.00 0.00 2.90
2317 2787 2.163412 GCGGAGATGGCAAAAATACACA 59.837 45.455 0.00 0.00 0.00 3.72
2318 2788 3.731867 GCGGAGATGGCAAAAATACACAG 60.732 47.826 0.00 0.00 0.00 3.66
2319 2789 3.731867 CGGAGATGGCAAAAATACACAGC 60.732 47.826 0.00 0.00 0.00 4.40
2320 2790 3.429410 GGAGATGGCAAAAATACACAGCC 60.429 47.826 0.00 0.00 45.41 4.85
2323 2793 2.078849 GGCAAAAATACACAGCCACC 57.921 50.000 0.00 0.00 44.59 4.61
2324 2794 1.342819 GGCAAAAATACACAGCCACCA 59.657 47.619 0.00 0.00 44.59 4.17
2325 2795 2.224161 GGCAAAAATACACAGCCACCAA 60.224 45.455 0.00 0.00 44.59 3.67
2326 2796 3.462021 GCAAAAATACACAGCCACCAAA 58.538 40.909 0.00 0.00 0.00 3.28
2327 2797 3.247411 GCAAAAATACACAGCCACCAAAC 59.753 43.478 0.00 0.00 0.00 2.93
2328 2798 3.744238 AAAATACACAGCCACCAAACC 57.256 42.857 0.00 0.00 0.00 3.27
2329 2799 1.243902 AATACACAGCCACCAAACCG 58.756 50.000 0.00 0.00 0.00 4.44
2330 2800 0.109723 ATACACAGCCACCAAACCGT 59.890 50.000 0.00 0.00 0.00 4.83
2331 2801 0.816018 TACACAGCCACCAAACCGTG 60.816 55.000 0.00 0.00 0.00 4.94
2383 2853 5.569428 GCAGCCTGAAGAAACCCAAATAAAT 60.569 40.000 0.00 0.00 0.00 1.40
2386 2856 7.445096 CAGCCTGAAGAAACCCAAATAAATTTT 59.555 33.333 0.00 0.00 0.00 1.82
2436 2909 5.644636 TGTTTAGTTAAGTTTAGATGGCGGG 59.355 40.000 0.00 0.00 0.00 6.13
2471 2944 2.212900 GATTTGGGAGGTTGTGCGGC 62.213 60.000 0.00 0.00 0.00 6.53
2491 2964 1.978782 CGTCGAAATGCAAGCCTTTTC 59.021 47.619 0.00 0.00 35.41 2.29
2554 3035 0.456653 GCGGTTGCAAGCCAATAGTG 60.457 55.000 22.14 7.95 42.15 2.74
2555 3036 1.164411 CGGTTGCAAGCCAATAGTGA 58.836 50.000 22.14 0.00 35.55 3.41
2556 3037 1.539388 CGGTTGCAAGCCAATAGTGAA 59.461 47.619 22.14 0.00 35.55 3.18
2610 3107 8.554528 CATTGTTATTTTTGCACATTAACACCA 58.445 29.630 10.18 1.90 33.75 4.17
2619 3116 3.631686 GCACATTAACACCATATGCTCCA 59.368 43.478 0.00 0.00 0.00 3.86
2705 3202 1.326548 CTTGGACGCTAATAACACGGC 59.673 52.381 0.00 0.00 0.00 5.68
2710 3207 0.586319 CGCTAATAACACGGCATGGG 59.414 55.000 0.00 0.00 0.00 4.00
2812 3309 5.083533 AGATGCTTTCTCTACCACAGAAG 57.916 43.478 0.00 0.00 31.48 2.85
2876 3373 0.339859 AGGGATGTCTGCTGGAGGTA 59.660 55.000 0.00 0.00 0.00 3.08
3074 3576 8.753133 GGGTCATCAGTATAATCATATGACAGA 58.247 37.037 7.78 0.00 43.07 3.41
3093 3595 3.074412 AGACTTCATTTTACCACCTGCG 58.926 45.455 0.00 0.00 0.00 5.18
3100 3602 2.093306 TTTACCACCTGCGATCACAG 57.907 50.000 3.63 3.63 37.42 3.66
3352 3854 2.213499 AGTTTGTTGTCCTGCTTCTCG 58.787 47.619 0.00 0.00 0.00 4.04
3358 3860 3.244078 TGTTGTCCTGCTTCTCGTTATGT 60.244 43.478 0.00 0.00 0.00 2.29
3371 3873 5.534407 TCTCGTTATGTTGTCTTACAAGCA 58.466 37.500 0.00 0.00 39.00 3.91
3376 3878 6.855914 CGTTATGTTGTCTTACAAGCAAATGT 59.144 34.615 0.00 0.00 39.00 2.71
3431 3934 6.713762 TTATTTGGAGATGGGCATGTAAAG 57.286 37.500 0.00 0.00 0.00 1.85
3437 3940 3.877508 GAGATGGGCATGTAAAGTACCAC 59.122 47.826 0.00 0.00 0.00 4.16
3511 4015 6.571731 GCAATATGGCTTGTATGATGCAGAAT 60.572 38.462 0.00 0.00 0.00 2.40
3785 4289 6.187682 TCTGTTGTATCAGACTATCAGTCCA 58.812 40.000 2.74 0.00 46.18 4.02
3786 4290 6.663523 TCTGTTGTATCAGACTATCAGTCCAA 59.336 38.462 2.74 0.00 46.18 3.53
3794 4298 6.814043 TCAGACTATCAGTCCAATCAATCTG 58.186 40.000 2.74 0.00 46.18 2.90
3870 4374 5.048504 CAGACTATGTGTGAAATTGCCACTT 60.049 40.000 11.14 5.98 35.66 3.16
3873 4377 1.411977 TGTGTGAAATTGCCACTTGGG 59.588 47.619 11.14 0.00 40.85 4.12
3888 4392 0.252761 TTGGGCAAGAGATGATCGCA 59.747 50.000 0.00 0.00 0.00 5.10
3889 4393 0.462581 TGGGCAAGAGATGATCGCAC 60.463 55.000 0.00 0.00 0.00 5.34
3890 4394 0.462581 GGGCAAGAGATGATCGCACA 60.463 55.000 0.00 0.00 0.00 4.57
3891 4395 1.372582 GGCAAGAGATGATCGCACAA 58.627 50.000 0.00 0.00 0.00 3.33
4112 4660 4.690184 TGTGCATGATTAAGCTGTTCAG 57.310 40.909 0.00 0.00 0.00 3.02
4113 4661 4.074259 TGTGCATGATTAAGCTGTTCAGT 58.926 39.130 0.00 0.00 0.00 3.41
4114 4662 5.244755 TGTGCATGATTAAGCTGTTCAGTA 58.755 37.500 0.00 0.00 0.00 2.74
4115 4663 5.122239 TGTGCATGATTAAGCTGTTCAGTAC 59.878 40.000 0.00 0.00 0.00 2.73
4116 4664 4.635765 TGCATGATTAAGCTGTTCAGTACC 59.364 41.667 0.00 0.00 0.00 3.34
4117 4665 4.878397 GCATGATTAAGCTGTTCAGTACCT 59.122 41.667 0.00 0.00 0.00 3.08
4118 4666 5.355350 GCATGATTAAGCTGTTCAGTACCTT 59.645 40.000 0.00 0.28 0.00 3.50
4119 4667 6.538742 GCATGATTAAGCTGTTCAGTACCTTA 59.461 38.462 0.00 0.00 0.00 2.69
4120 4668 7.065803 GCATGATTAAGCTGTTCAGTACCTTAA 59.934 37.037 0.00 10.85 33.91 1.85
4121 4669 9.113838 CATGATTAAGCTGTTCAGTACCTTAAT 57.886 33.333 16.21 16.21 39.85 1.40
4122 4670 8.492673 TGATTAAGCTGTTCAGTACCTTAATG 57.507 34.615 18.84 0.00 38.26 1.90
4123 4671 8.100791 TGATTAAGCTGTTCAGTACCTTAATGT 58.899 33.333 18.84 6.51 38.26 2.71
4124 4672 8.863872 ATTAAGCTGTTCAGTACCTTAATGTT 57.136 30.769 15.84 2.75 37.33 2.71
4125 4673 8.685838 TTAAGCTGTTCAGTACCTTAATGTTT 57.314 30.769 0.00 0.00 0.00 2.83
4126 4674 7.582667 AAGCTGTTCAGTACCTTAATGTTTT 57.417 32.000 0.00 0.00 0.00 2.43
4127 4675 7.582667 AGCTGTTCAGTACCTTAATGTTTTT 57.417 32.000 1.78 0.00 0.00 1.94
4147 4695 1.694844 TTTTCGAAAAGGGGGTCACC 58.305 50.000 19.08 0.00 39.11 4.02
4148 4696 0.848053 TTTCGAAAAGGGGGTCACCT 59.152 50.000 8.44 0.00 44.56 4.00
4149 4697 0.399075 TTCGAAAAGGGGGTCACCTC 59.601 55.000 0.00 0.00 40.87 3.85
4150 4698 1.375523 CGAAAAGGGGGTCACCTCG 60.376 63.158 0.00 0.00 44.33 4.63
4151 4699 1.002502 GAAAAGGGGGTCACCTCGG 60.003 63.158 0.00 0.00 44.33 4.63
4152 4700 3.205851 AAAAGGGGGTCACCTCGGC 62.206 63.158 0.00 0.00 44.33 5.54
4157 4705 3.775654 GGGTCACCTCGGCCTCTG 61.776 72.222 0.00 0.00 0.00 3.35
4158 4706 4.459089 GGTCACCTCGGCCTCTGC 62.459 72.222 0.00 0.00 0.00 4.26
4159 4707 3.695606 GTCACCTCGGCCTCTGCA 61.696 66.667 0.00 0.00 40.13 4.41
4160 4708 2.685017 TCACCTCGGCCTCTGCAT 60.685 61.111 0.00 0.00 40.13 3.96
4161 4709 2.202987 CACCTCGGCCTCTGCATC 60.203 66.667 0.00 0.00 40.13 3.91
4162 4710 2.685017 ACCTCGGCCTCTGCATCA 60.685 61.111 0.00 0.00 40.13 3.07
4163 4711 2.108566 CCTCGGCCTCTGCATCAG 59.891 66.667 0.00 0.00 40.13 2.90
4164 4712 2.429767 CCTCGGCCTCTGCATCAGA 61.430 63.158 0.00 0.00 38.25 3.27
4165 4713 1.519246 CTCGGCCTCTGCATCAGAA 59.481 57.895 0.00 0.00 40.18 3.02
4166 4714 0.809241 CTCGGCCTCTGCATCAGAAC 60.809 60.000 0.00 0.00 40.18 3.01
4167 4715 2.169789 CGGCCTCTGCATCAGAACG 61.170 63.158 0.00 0.63 40.18 3.95
4168 4716 1.219124 GGCCTCTGCATCAGAACGA 59.781 57.895 0.00 0.00 40.18 3.85
4169 4717 0.179062 GGCCTCTGCATCAGAACGAT 60.179 55.000 0.00 0.00 40.18 3.73
4178 4726 1.193203 CATCAGAACGATGCATACGGC 59.807 52.381 18.34 11.86 44.95 5.68
4179 4727 0.529773 TCAGAACGATGCATACGGCC 60.530 55.000 18.34 0.00 43.89 6.13
4180 4728 0.809636 CAGAACGATGCATACGGCCA 60.810 55.000 18.34 0.00 43.89 5.36
4181 4729 0.107897 AGAACGATGCATACGGCCAA 60.108 50.000 18.34 0.00 43.89 4.52
4182 4730 0.027586 GAACGATGCATACGGCCAAC 59.972 55.000 18.34 0.00 43.89 3.77
4183 4731 0.675208 AACGATGCATACGGCCAACA 60.675 50.000 18.34 0.00 43.89 3.33
4345 4893 4.935808 CACAGTATTGAAGGTACCAAGTCC 59.064 45.833 15.94 0.00 0.00 3.85
4463 5012 4.700213 TGCTGCTAAGAATTTGAAGGTACC 59.300 41.667 2.73 2.73 26.28 3.34
4495 5044 4.080975 CCCATAATTGTCACCTGGCAAAAT 60.081 41.667 0.00 0.00 43.42 1.82
4536 5085 6.442513 ACTTACTCTTTATGAAAGCATGCC 57.557 37.500 15.66 0.00 38.39 4.40
4867 5416 5.645056 TGGGATCATTATCTGCTGGTAAA 57.355 39.130 0.00 0.00 32.29 2.01
4872 5421 8.084684 GGGATCATTATCTGCTGGTAAATTTTC 58.915 37.037 0.00 0.00 32.29 2.29
4876 5426 8.811017 TCATTATCTGCTGGTAAATTTTCCAAA 58.189 29.630 16.28 8.07 33.06 3.28
4881 5431 8.744568 TCTGCTGGTAAATTTTCCAAATTTTT 57.255 26.923 16.28 0.00 33.06 1.94
4911 5461 6.471233 TCTTTTCTGTCTCTTGAGTTCTCA 57.529 37.500 0.00 0.00 0.00 3.27
4961 5511 7.554211 TGGTGCATGCAATAATTTTCTGATTA 58.446 30.769 24.58 0.00 0.00 1.75
5461 6024 8.257602 TCAATATATCCTTGCTACACCTGTTA 57.742 34.615 0.00 0.00 0.00 2.41
5612 6176 2.361757 CCAAGTGCCATCTTTGTGTTGA 59.638 45.455 0.00 0.00 0.00 3.18
5798 6362 4.506288 CCACATTTCGTTAGTCATATGCGA 59.494 41.667 0.00 0.00 0.00 5.10
5806 6370 5.856455 TCGTTAGTCATATGCGATGTACATG 59.144 40.000 14.43 6.99 0.00 3.21
5841 6405 9.090692 ACAATTTCTTGACAAATCTTTTCACAG 57.909 29.630 0.00 0.00 36.20 3.66
5846 6410 6.531240 TCTTGACAAATCTTTTCACAGTTTGC 59.469 34.615 0.00 0.00 34.12 3.68
5867 6431 0.321564 GTGGCCATGTCACAGTGCTA 60.322 55.000 9.72 0.00 38.14 3.49
5868 6432 0.399833 TGGCCATGTCACAGTGCTAA 59.600 50.000 0.00 0.00 0.00 3.09
5869 6433 1.004628 TGGCCATGTCACAGTGCTAAT 59.995 47.619 0.00 0.00 0.00 1.73
5870 6434 1.402968 GGCCATGTCACAGTGCTAATG 59.597 52.381 0.00 0.00 0.00 1.90
5872 6436 2.489329 GCCATGTCACAGTGCTAATGTT 59.511 45.455 0.00 0.00 0.00 2.71
5880 6446 3.940852 CACAGTGCTAATGTTAGGCATCA 59.059 43.478 2.29 0.00 36.67 3.07
5965 6531 3.489355 TGTGTGTCATCCAGCTTTCAAT 58.511 40.909 0.00 0.00 0.00 2.57
5984 6550 4.474651 TCAATTCTGGATCTGGAAGCCTTA 59.525 41.667 0.00 0.00 0.00 2.69
5991 6557 6.267928 TCTGGATCTGGAAGCCTTATAGTAAC 59.732 42.308 0.00 0.00 0.00 2.50
5992 6558 5.307196 TGGATCTGGAAGCCTTATAGTAACC 59.693 44.000 0.00 0.00 0.00 2.85
5994 6560 6.013293 GGATCTGGAAGCCTTATAGTAACCAT 60.013 42.308 0.00 0.00 0.00 3.55
5995 6561 7.180408 GGATCTGGAAGCCTTATAGTAACCATA 59.820 40.741 0.00 0.00 0.00 2.74
6036 6604 1.781025 CGCACCCTGCTTCGTTTCAA 61.781 55.000 0.00 0.00 42.25 2.69
6053 6621 7.184106 TCGTTTCAACACACAAATAGAAAGAC 58.816 34.615 0.00 0.00 0.00 3.01
6055 6623 5.090652 TCAACACACAAATAGAAAGACGC 57.909 39.130 0.00 0.00 0.00 5.19
6070 6638 4.649845 CGCCGTTAAAGGGGGAAT 57.350 55.556 15.38 0.00 38.20 3.01
6104 6672 8.031277 CCTTAACTGTACGTTGTTAGGTAGAAT 58.969 37.037 11.63 0.00 37.05 2.40
6115 6683 2.789409 AGGTAGAATTGAGGCACCAC 57.211 50.000 0.00 0.00 0.00 4.16
6167 6735 1.668294 CTCACGGGTCTGTGCTCTT 59.332 57.895 5.12 0.00 39.73 2.85
6176 6744 0.320374 TCTGTGCTCTTACCAACCGG 59.680 55.000 0.00 0.00 38.77 5.28
6185 6753 2.346284 TTACCAACCGGCCACTGCTT 62.346 55.000 0.00 0.00 37.74 3.91
6225 6793 7.228507 ACACACAAATCACTACTTCATTAAGCA 59.771 33.333 0.00 0.00 36.05 3.91
6233 6801 5.877012 CACTACTTCATTAAGCAGTCCACAT 59.123 40.000 0.00 0.00 37.24 3.21
6267 6835 2.454772 TCCCTTCCCTATATCTGGCTCA 59.545 50.000 0.00 0.00 0.00 4.26
6451 7103 7.849804 TTAGAATTTCATACCTGACTTGCTC 57.150 36.000 0.00 0.00 0.00 4.26
6510 7333 9.444600 TTGAGGTGTAGTTAGTTATGGAATTTC 57.555 33.333 0.00 0.00 0.00 2.17
6545 7376 7.222000 ACGAAGCAAACCCTTTATCAAAATA 57.778 32.000 0.00 0.00 0.00 1.40
6667 7498 7.310361 CCCCTCTCATAGGCTCTAGAAAATAAG 60.310 44.444 0.00 0.00 45.03 1.73
6786 7617 6.482308 GTCACTTCAGAACTAAGCTTACCAAA 59.518 38.462 0.86 0.00 0.00 3.28
6799 7630 9.952188 CTAAGCTTACCAAAATTATTAAGGAGC 57.048 33.333 0.86 3.05 0.00 4.70
6818 7649 3.146847 AGCGAAAGTAGGGGAAAACAAG 58.853 45.455 0.00 0.00 0.00 3.16
6905 7739 1.890876 AACGACTGCACATGCCTTAA 58.109 45.000 0.49 0.00 41.18 1.85
6931 7765 0.550914 TCACTTCCCAGTTGCCACTT 59.449 50.000 0.00 0.00 0.00 3.16
7002 7837 3.384789 GTGCTCCTTTGGAAAAGGACTTT 59.615 43.478 15.81 0.00 41.27 2.66
7083 7919 3.959573 ATAGTCTAGCGTCCAACGTAC 57.040 47.619 1.14 0.00 44.73 3.67
7084 7920 1.818642 AGTCTAGCGTCCAACGTACT 58.181 50.000 1.14 0.00 44.73 2.73
7086 7922 2.161211 AGTCTAGCGTCCAACGTACTTC 59.839 50.000 1.14 0.00 44.73 3.01
7087 7923 1.129251 TCTAGCGTCCAACGTACTTCG 59.871 52.381 1.14 0.00 44.73 3.79
7088 7924 0.454957 TAGCGTCCAACGTACTTCGC 60.455 55.000 16.22 16.22 44.73 4.70
7162 7999 9.061435 AGTTATAAATCTTTCAGCTAGCATTCC 57.939 33.333 18.83 0.00 0.00 3.01
7488 8331 2.765807 CTCCTCATCCGGCCTGGT 60.766 66.667 12.46 0.00 39.52 4.00
7517 8360 1.001860 GCAGAGCAGAAGTTCTCCTGT 59.998 52.381 19.45 7.71 32.51 4.00
7563 8416 5.123820 GTGTGTTGTATGGTAGCATGTCATT 59.876 40.000 17.58 0.00 0.00 2.57
7700 8553 1.228124 CGCAGTTTGTGGAGGGGAA 60.228 57.895 0.00 0.00 0.00 3.97
7704 8557 1.068121 AGTTTGTGGAGGGGAAGAGG 58.932 55.000 0.00 0.00 0.00 3.69
7705 8558 1.064825 GTTTGTGGAGGGGAAGAGGA 58.935 55.000 0.00 0.00 0.00 3.71
7706 8559 1.636003 GTTTGTGGAGGGGAAGAGGAT 59.364 52.381 0.00 0.00 0.00 3.24
7896 8757 7.148507 GGATGTTCATCTCTTACTCTGTGTTTG 60.149 40.741 11.73 0.00 0.00 2.93
7964 8833 1.774110 ATGGGTGTTGCTTTGTGTGA 58.226 45.000 0.00 0.00 0.00 3.58
7975 8844 4.765273 TGCTTTGTGTGAGAGACAACTAA 58.235 39.130 0.00 0.00 35.91 2.24
7977 8846 4.570772 GCTTTGTGTGAGAGACAACTAACA 59.429 41.667 0.00 0.00 35.91 2.41
8129 9003 2.864471 GCCACTGCCTGCTGCTTTT 61.864 57.895 0.00 0.00 42.00 2.27
8130 9004 1.006571 CCACTGCCTGCTGCTTTTG 60.007 57.895 0.00 0.00 42.00 2.44
8146 9023 8.364142 TGCTGCTTTTGTTTACCAATAATAACT 58.636 29.630 0.00 0.00 31.81 2.24
8148 9025 9.353999 CTGCTTTTGTTTACCAATAATAACTCC 57.646 33.333 0.00 0.00 31.81 3.85
8240 9139 2.991250 ACTTTGATCCATCTTGACCCG 58.009 47.619 0.00 0.00 0.00 5.28
8252 9151 1.385756 TTGACCCGTCGACAGTGTCA 61.386 55.000 22.66 21.11 34.38 3.58
8254 9153 0.038526 GACCCGTCGACAGTGTCATT 60.039 55.000 22.66 0.00 32.09 2.57
8269 9168 1.136057 GTCATTTTGCGACCTCGGTTC 60.136 52.381 0.00 0.00 40.23 3.62
8307 9206 3.942115 GGAGTGGTAGATTTCTTTCTGCC 59.058 47.826 2.09 2.09 45.68 4.85
8309 9208 5.248380 AGTGGTAGATTTCTTTCTGCCTT 57.752 39.130 9.49 0.00 45.67 4.35
8310 9209 6.374417 AGTGGTAGATTTCTTTCTGCCTTA 57.626 37.500 9.49 0.00 45.67 2.69
8319 9218 4.689612 TCTTTCTGCCTTACTGTGTCTT 57.310 40.909 0.00 0.00 0.00 3.01
8406 9311 0.884259 TGGCTGTCGGTGAATGTGTG 60.884 55.000 0.00 0.00 0.00 3.82
8408 9313 0.512952 GCTGTCGGTGAATGTGTGTC 59.487 55.000 0.00 0.00 0.00 3.67
8414 9319 1.264020 CGGTGAATGTGTGTCAACAGG 59.736 52.381 0.00 0.00 36.84 4.00
8420 9325 1.887242 GTGTGTCAACAGGCAGCGA 60.887 57.895 0.00 0.00 36.84 4.93
8421 9326 1.595109 TGTGTCAACAGGCAGCGAG 60.595 57.895 0.00 0.00 0.00 5.03
8422 9327 2.031012 TGTCAACAGGCAGCGAGG 59.969 61.111 0.00 0.00 0.00 4.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
39 40 2.423446 CACCCTATGAGCCGAGCC 59.577 66.667 0.00 0.00 0.00 4.70
40 41 2.370647 GACCACCCTATGAGCCGAGC 62.371 65.000 0.00 0.00 0.00 5.03
76 77 0.600782 GTACGCACCTTTGACCGGAA 60.601 55.000 9.46 0.00 0.00 4.30
110 111 4.876107 ACGTGAGTAGCAATAGGGATTTTG 59.124 41.667 0.00 0.00 46.88 2.44
111 112 5.099042 ACGTGAGTAGCAATAGGGATTTT 57.901 39.130 0.00 0.00 46.88 1.82
135 136 2.700897 ACTCCAATTCTCTACCCCGATG 59.299 50.000 0.00 0.00 0.00 3.84
139 140 4.287552 TCTGTACTCCAATTCTCTACCCC 58.712 47.826 0.00 0.00 0.00 4.95
156 157 2.031870 CGGAGGATGTGGTGATCTGTA 58.968 52.381 0.00 0.00 0.00 2.74
170 171 1.299648 CCAATTGGAGTGCGGAGGA 59.700 57.895 20.50 0.00 37.39 3.71
171 172 1.750399 CCCAATTGGAGTGCGGAGG 60.750 63.158 26.60 1.42 37.39 4.30
177 178 0.040204 AGAAGGGCCCAATTGGAGTG 59.960 55.000 27.56 10.43 37.39 3.51
215 216 2.901042 GGGTTCTCGCCCTCGAAT 59.099 61.111 0.00 0.00 44.98 3.34
240 241 3.759418 TCTTCGCACATCTAGTCTTTCG 58.241 45.455 0.00 0.00 0.00 3.46
256 257 5.060569 CCGTACACATCAAAGTACTTCTTCG 59.939 44.000 8.95 1.26 38.69 3.79
261 262 4.748102 CACACCGTACACATCAAAGTACTT 59.252 41.667 1.12 1.12 38.69 2.24
264 265 3.061322 GCACACCGTACACATCAAAGTA 58.939 45.455 0.00 0.00 0.00 2.24
278 279 1.101049 AAAGACCCAGTTGCACACCG 61.101 55.000 0.00 0.00 0.00 4.94
281 282 0.754957 CCCAAAGACCCAGTTGCACA 60.755 55.000 0.00 0.00 0.00 4.57
289 290 1.637724 AACACGGACCCAAAGACCCA 61.638 55.000 0.00 0.00 0.00 4.51
292 293 1.652563 GCAACACGGACCCAAAGAC 59.347 57.895 0.00 0.00 0.00 3.01
325 370 4.892965 AGCAAGCCGTGGTGCCAA 62.893 61.111 0.00 0.00 41.88 4.52
333 378 2.203337 TTGAAGCCAGCAAGCCGT 60.203 55.556 0.00 0.00 0.00 5.68
335 380 0.038801 GAACTTGAAGCCAGCAAGCC 60.039 55.000 9.84 1.21 45.00 4.35
339 384 1.165907 CCGTGAACTTGAAGCCAGCA 61.166 55.000 0.00 0.00 0.00 4.41
364 409 2.517402 TGTGAACGGGGGTGTTGC 60.517 61.111 0.00 0.00 30.75 4.17
396 481 4.933563 TTGGCGCACAGAGCAGCA 62.934 61.111 10.83 0.00 46.13 4.41
422 507 3.436704 CCATTGTGTTTGATACTGCTCGT 59.563 43.478 0.00 0.00 0.00 4.18
424 509 3.191162 TGCCATTGTGTTTGATACTGCTC 59.809 43.478 0.00 0.00 0.00 4.26
461 546 0.658244 CGTTTCGTCGGTTCGTGAGA 60.658 55.000 0.00 0.00 39.20 3.27
499 586 3.327754 CGAAATCCGCCGGCTACG 61.328 66.667 26.68 15.85 40.55 3.51
545 638 2.843113 AGATCCCTTCTCCCTTCAACTG 59.157 50.000 0.00 0.00 0.00 3.16
565 659 1.082431 CTAGATCGACCGCGCTGAG 60.082 63.158 5.61 0.00 37.46 3.35
568 662 3.288290 CCCTAGATCGACCGCGCT 61.288 66.667 5.56 0.00 37.46 5.92
571 665 0.249363 GGAAACCCTAGATCGACCGC 60.249 60.000 0.00 0.00 0.00 5.68
574 668 1.109609 ACCGGAAACCCTAGATCGAC 58.890 55.000 9.46 0.00 0.00 4.20
591 685 3.775654 CCTCCTCCTGGCGACACC 61.776 72.222 0.00 0.00 39.84 4.16
610 705 2.159379 GGATTCGAAAACATGCAGGTCC 60.159 50.000 3.65 0.00 0.00 4.46
614 709 2.749076 TCTGGGATTCGAAAACATGCAG 59.251 45.455 0.00 1.90 0.00 4.41
616 711 2.749621 ACTCTGGGATTCGAAAACATGC 59.250 45.455 0.00 0.00 0.00 4.06
617 712 4.142600 GGAACTCTGGGATTCGAAAACATG 60.143 45.833 0.00 0.00 0.00 3.21
618 713 4.010349 GGAACTCTGGGATTCGAAAACAT 58.990 43.478 0.00 0.00 0.00 2.71
678 785 4.041723 GCGTGCAAGTCTGTGTTTAATTT 58.958 39.130 0.59 0.00 0.00 1.82
687 794 3.374058 GGTATATTTGCGTGCAAGTCTGT 59.626 43.478 5.83 0.00 37.24 3.41
709 816 4.846779 TTCTGGTTTCGGAATTTCTTGG 57.153 40.909 0.00 0.00 33.64 3.61
710 817 6.012658 TCATTCTGGTTTCGGAATTTCTTG 57.987 37.500 0.00 0.00 44.24 3.02
721 828 2.622942 TGTGGTGCTTCATTCTGGTTTC 59.377 45.455 0.00 0.00 0.00 2.78
735 842 0.382515 TAGTTTTTGCCGTGTGGTGC 59.617 50.000 0.00 0.00 37.67 5.01
740 847 2.485266 GCAAGTAGTTTTTGCCGTGT 57.515 45.000 0.00 0.00 43.88 4.49
758 865 1.715862 GGAGGGCGAATCGAAAAGGC 61.716 60.000 6.91 0.00 0.00 4.35
764 871 1.816863 GCTATGGGAGGGCGAATCGA 61.817 60.000 6.91 0.00 0.00 3.59
769 876 2.122413 ATGGCTATGGGAGGGCGA 60.122 61.111 0.00 0.00 0.00 5.54
771 878 1.504275 ATGGATGGCTATGGGAGGGC 61.504 60.000 0.00 0.00 0.00 5.19
778 885 1.676916 CCACGGCTATGGATGGCTATG 60.677 57.143 0.84 0.00 43.02 2.23
779 886 0.615331 CCACGGCTATGGATGGCTAT 59.385 55.000 0.84 0.00 43.02 2.97
780 887 0.762842 ACCACGGCTATGGATGGCTA 60.763 55.000 12.97 0.00 43.02 3.93
781 888 2.044806 GACCACGGCTATGGATGGCT 62.045 60.000 12.97 0.00 43.02 4.75
782 889 1.598130 GACCACGGCTATGGATGGC 60.598 63.158 12.97 0.00 43.02 4.40
783 890 1.071471 GGACCACGGCTATGGATGG 59.929 63.158 12.97 1.13 43.02 3.51
784 891 0.250038 CTGGACCACGGCTATGGATG 60.250 60.000 12.97 0.00 43.02 3.51
785 892 2.136791 CTGGACCACGGCTATGGAT 58.863 57.895 12.97 0.00 43.02 3.41
786 893 3.628989 CTGGACCACGGCTATGGA 58.371 61.111 12.97 0.00 43.02 3.41
818 1184 3.739300 TGCTCTGCGTTTTACTCTACAAC 59.261 43.478 0.00 0.00 0.00 3.32
820 1186 3.653539 TGCTCTGCGTTTTACTCTACA 57.346 42.857 0.00 0.00 0.00 2.74
821 1187 4.985044 TTTGCTCTGCGTTTTACTCTAC 57.015 40.909 0.00 0.00 0.00 2.59
822 1188 5.234752 TGATTTGCTCTGCGTTTTACTCTA 58.765 37.500 0.00 0.00 0.00 2.43
823 1189 4.065088 TGATTTGCTCTGCGTTTTACTCT 58.935 39.130 0.00 0.00 0.00 3.24
824 1190 4.404507 TGATTTGCTCTGCGTTTTACTC 57.595 40.909 0.00 0.00 0.00 2.59
825 1191 4.829064 TTGATTTGCTCTGCGTTTTACT 57.171 36.364 0.00 0.00 0.00 2.24
826 1192 6.251376 CCTATTTGATTTGCTCTGCGTTTTAC 59.749 38.462 0.00 0.00 0.00 2.01
827 1193 6.321717 CCTATTTGATTTGCTCTGCGTTTTA 58.678 36.000 0.00 0.00 0.00 1.52
828 1194 5.163513 CCTATTTGATTTGCTCTGCGTTTT 58.836 37.500 0.00 0.00 0.00 2.43
829 1195 4.737054 CCTATTTGATTTGCTCTGCGTTT 58.263 39.130 0.00 0.00 0.00 3.60
830 1196 3.428045 GCCTATTTGATTTGCTCTGCGTT 60.428 43.478 0.00 0.00 0.00 4.84
831 1197 2.098117 GCCTATTTGATTTGCTCTGCGT 59.902 45.455 0.00 0.00 0.00 5.24
832 1198 2.724349 GCCTATTTGATTTGCTCTGCG 58.276 47.619 0.00 0.00 0.00 5.18
833 1199 2.542411 CCGCCTATTTGATTTGCTCTGC 60.542 50.000 0.00 0.00 0.00 4.26
834 1200 2.542411 GCCGCCTATTTGATTTGCTCTG 60.542 50.000 0.00 0.00 0.00 3.35
962 1355 1.744741 GTGCTCTGCTTCCTGCTCC 60.745 63.158 0.00 0.00 43.37 4.70
1103 1496 4.408821 GCATCCCCAGCACCGTCA 62.409 66.667 0.00 0.00 0.00 4.35
1284 1707 3.708220 CTTCCCGACGCTCCTGCTC 62.708 68.421 0.00 0.00 36.97 4.26
1285 1708 3.764466 CTTCCCGACGCTCCTGCT 61.764 66.667 0.00 0.00 36.97 4.24
1441 1866 1.380650 GAGAGGAAGAGGGAGGCGT 60.381 63.158 0.00 0.00 0.00 5.68
1443 1868 0.326143 AAGGAGAGGAAGAGGGAGGC 60.326 60.000 0.00 0.00 0.00 4.70
1462 1887 1.031571 GCAATCAGTCAATGGCCGGA 61.032 55.000 5.05 0.00 0.00 5.14
1555 1985 4.194720 CTCGAGGAGGAACCGCCG 62.195 72.222 3.91 0.00 44.74 6.46
1696 2130 4.742201 CTCTGACACGTGGCCCCG 62.742 72.222 21.02 5.91 0.00 5.73
1700 2134 1.859427 TACCGTCTCTGACACGTGGC 61.859 60.000 21.57 19.24 35.39 5.01
1716 2150 0.746923 AAAAATCTCGCCCCGCTACC 60.747 55.000 0.00 0.00 0.00 3.18
1720 2154 1.749258 AGGAAAAATCTCGCCCCGC 60.749 57.895 0.00 0.00 0.00 6.13
1725 2159 1.534729 ACCACCAGGAAAAATCTCGC 58.465 50.000 0.00 0.00 38.69 5.03
1763 2197 1.880894 CAGCAGCAACCATGTCCAG 59.119 57.895 0.00 0.00 0.00 3.86
1765 2199 1.975407 AGCAGCAGCAACCATGTCC 60.975 57.895 3.17 0.00 45.49 4.02
1766 2200 1.211969 CAGCAGCAGCAACCATGTC 59.788 57.895 3.17 0.00 45.49 3.06
1767 2201 2.273179 CCAGCAGCAGCAACCATGT 61.273 57.895 3.17 0.00 45.49 3.21
1844 2293 7.607223 CCATTTGGATTTTGGCTATCAGAAAAA 59.393 33.333 0.00 0.00 37.39 1.94
1845 2294 7.104939 CCATTTGGATTTTGGCTATCAGAAAA 58.895 34.615 0.00 0.00 37.39 2.29
1846 2295 6.213195 ACCATTTGGATTTTGGCTATCAGAAA 59.787 34.615 3.01 0.00 38.94 2.52
1847 2296 5.721000 ACCATTTGGATTTTGGCTATCAGAA 59.279 36.000 3.01 0.00 38.94 3.02
1854 2308 3.055891 GCAGTACCATTTGGATTTTGGCT 60.056 43.478 3.01 0.00 38.94 4.75
1872 2326 0.031994 GTCCAAATTTGCGGTGCAGT 59.968 50.000 12.92 0.00 40.61 4.40
1881 2335 1.200020 GGCGAGTGGAGTCCAAATTTG 59.800 52.381 15.09 11.40 34.18 2.32
1928 2382 0.968901 CCAGCATGCATTGACCCACT 60.969 55.000 21.98 0.00 31.97 4.00
1937 2398 3.257375 CAGTTATTATGGCCAGCATGCAT 59.743 43.478 21.98 6.58 31.97 3.96
1942 2403 2.433662 TGCAGTTATTATGGCCAGCA 57.566 45.000 13.05 10.05 0.00 4.41
1948 2409 6.627395 TCGGGTTTTATGCAGTTATTATGG 57.373 37.500 0.00 0.00 0.00 2.74
1952 2413 6.262273 CAGGTATCGGGTTTTATGCAGTTATT 59.738 38.462 0.00 0.00 0.00 1.40
1956 2417 3.199071 TCAGGTATCGGGTTTTATGCAGT 59.801 43.478 0.00 0.00 0.00 4.40
1972 2434 1.899437 CGGGCTTCAGGCTTCAGGTA 61.899 60.000 0.00 0.00 41.46 3.08
1974 2436 2.437359 CGGGCTTCAGGCTTCAGG 60.437 66.667 0.00 0.00 41.46 3.86
1975 2437 1.003355 TTCGGGCTTCAGGCTTCAG 60.003 57.895 0.00 0.00 41.46 3.02
1976 2438 1.003355 CTTCGGGCTTCAGGCTTCA 60.003 57.895 0.00 0.00 41.46 3.02
1977 2439 2.402572 GCTTCGGGCTTCAGGCTTC 61.403 63.158 0.00 0.00 41.46 3.86
1978 2440 2.360475 GCTTCGGGCTTCAGGCTT 60.360 61.111 0.00 0.00 41.46 4.35
1979 2441 4.416738 GGCTTCGGGCTTCAGGCT 62.417 66.667 0.00 0.00 41.46 4.58
1982 2444 3.605749 TTCGGGCTTCGGGCTTCAG 62.606 63.158 1.83 0.00 41.46 3.02
1983 2445 3.632080 TTCGGGCTTCGGGCTTCA 61.632 61.111 1.83 0.00 41.46 3.02
1984 2446 3.125573 GTTCGGGCTTCGGGCTTC 61.126 66.667 1.83 0.00 41.46 3.86
1985 2447 4.717313 GGTTCGGGCTTCGGGCTT 62.717 66.667 1.83 0.00 41.46 4.35
2005 2467 5.249780 TGCTTTTCCAGGTTCAGGTTATA 57.750 39.130 0.00 0.00 0.00 0.98
2014 2476 1.780503 AGTGCTTGCTTTTCCAGGTT 58.219 45.000 0.00 0.00 0.00 3.50
2018 2480 2.819608 GGATGTAGTGCTTGCTTTTCCA 59.180 45.455 0.00 0.00 0.00 3.53
2020 2482 2.159517 CCGGATGTAGTGCTTGCTTTTC 60.160 50.000 0.00 0.00 0.00 2.29
2025 2487 1.571919 CTACCGGATGTAGTGCTTGC 58.428 55.000 9.46 0.00 41.77 4.01
2032 2494 6.870500 GTTCCAAAACTGCTACCGGATGTAG 61.870 48.000 9.46 11.71 39.93 2.74
2033 2495 2.568062 TCCAAAACTGCTACCGGATGTA 59.432 45.455 9.46 0.00 0.00 2.29
2034 2496 1.349688 TCCAAAACTGCTACCGGATGT 59.650 47.619 9.46 0.00 0.00 3.06
2035 2497 2.107950 TCCAAAACTGCTACCGGATG 57.892 50.000 9.46 0.23 0.00 3.51
2036 2498 2.039879 AGTTCCAAAACTGCTACCGGAT 59.960 45.455 9.46 0.00 44.13 4.18
2037 2499 1.418637 AGTTCCAAAACTGCTACCGGA 59.581 47.619 9.46 0.00 44.13 5.14
2038 2500 1.892209 AGTTCCAAAACTGCTACCGG 58.108 50.000 0.00 0.00 44.13 5.28
2039 2501 3.395639 TGTAGTTCCAAAACTGCTACCG 58.604 45.455 7.68 0.00 45.30 4.02
2040 2502 4.092968 CGATGTAGTTCCAAAACTGCTACC 59.907 45.833 7.68 0.00 45.30 3.18
2041 2503 4.092968 CCGATGTAGTTCCAAAACTGCTAC 59.907 45.833 7.68 0.00 45.30 3.58
2042 2504 4.250464 CCGATGTAGTTCCAAAACTGCTA 58.750 43.478 7.68 0.00 45.30 3.49
2043 2505 3.074412 CCGATGTAGTTCCAAAACTGCT 58.926 45.455 7.68 0.00 45.30 4.24
2044 2506 2.161609 CCCGATGTAGTTCCAAAACTGC 59.838 50.000 1.17 0.67 45.37 4.40
2045 2507 3.408634 ACCCGATGTAGTTCCAAAACTG 58.591 45.455 1.17 0.00 45.37 3.16
2085 2547 8.746052 TCAATAATCATTTCCCGAACTACATT 57.254 30.769 0.00 0.00 0.00 2.71
2088 2550 7.132863 GCTTCAATAATCATTTCCCGAACTAC 58.867 38.462 0.00 0.00 0.00 2.73
2090 2552 5.067805 GGCTTCAATAATCATTTCCCGAACT 59.932 40.000 0.00 0.00 0.00 3.01
2091 2553 5.281727 GGCTTCAATAATCATTTCCCGAAC 58.718 41.667 0.00 0.00 0.00 3.95
2110 2572 3.388024 TGCGAGATATTTCTAGTGGGCTT 59.612 43.478 0.00 0.00 30.30 4.35
2126 2588 4.994217 TGAGTAAATGACATTTGTGCGAGA 59.006 37.500 21.21 0.00 33.82 4.04
2127 2589 5.281693 TGAGTAAATGACATTTGTGCGAG 57.718 39.130 21.21 0.00 33.82 5.03
2128 2590 5.878332 ATGAGTAAATGACATTTGTGCGA 57.122 34.783 21.21 0.31 33.82 5.10
2132 2594 6.317088 CAGCGAATGAGTAAATGACATTTGT 58.683 36.000 21.21 9.90 37.58 2.83
2135 2597 4.395854 TGCAGCGAATGAGTAAATGACATT 59.604 37.500 0.00 0.00 37.03 2.71
2144 2606 3.599343 ACATTTCTGCAGCGAATGAGTA 58.401 40.909 31.75 5.89 0.00 2.59
2158 2620 6.290605 AGCAGGCAAAAATAACAACATTTCT 58.709 32.000 0.00 0.00 0.00 2.52
2165 2627 3.254657 ACGCTAGCAGGCAAAAATAACAA 59.745 39.130 16.45 0.00 0.00 2.83
2177 2639 0.179150 GTGAGTGAGACGCTAGCAGG 60.179 60.000 16.45 1.28 0.00 4.85
2183 2645 1.662608 CCTGTGTGAGTGAGACGCT 59.337 57.895 0.00 0.00 0.00 5.07
2185 2647 1.373497 GCCCTGTGTGAGTGAGACG 60.373 63.158 0.00 0.00 0.00 4.18
2193 2661 1.404479 AAGTGGTACGCCCTGTGTGA 61.404 55.000 0.00 0.00 41.54 3.58
2198 2666 2.746277 GCCAAGTGGTACGCCCTG 60.746 66.667 0.00 0.00 41.54 4.45
2218 2686 4.591321 AAACAGAAGGCCATTCTATCCA 57.409 40.909 5.01 0.00 46.91 3.41
2230 2698 4.640201 TGAGTGTCCAAGAAAAACAGAAGG 59.360 41.667 0.00 0.00 0.00 3.46
2251 2719 3.297830 ACAATGACACGTTCTCGATGA 57.702 42.857 0.00 0.00 40.62 2.92
2260 2728 7.921787 TCAAACTAATTACAACAATGACACGT 58.078 30.769 0.00 0.00 0.00 4.49
2261 2729 8.279800 TCTCAAACTAATTACAACAATGACACG 58.720 33.333 0.00 0.00 0.00 4.49
2293 2763 2.283472 ATTTTTGCCATCTCCGCCGC 62.283 55.000 0.00 0.00 0.00 6.53
2294 2764 1.021202 TATTTTTGCCATCTCCGCCG 58.979 50.000 0.00 0.00 0.00 6.46
2295 2765 1.748493 TGTATTTTTGCCATCTCCGCC 59.252 47.619 0.00 0.00 0.00 6.13
2296 2766 2.163412 TGTGTATTTTTGCCATCTCCGC 59.837 45.455 0.00 0.00 0.00 5.54
2311 2781 0.109723 ACGGTTTGGTGGCTGTGTAT 59.890 50.000 0.00 0.00 0.00 2.29
2312 2782 0.816018 CACGGTTTGGTGGCTGTGTA 60.816 55.000 0.00 0.00 37.25 2.90
2313 2783 2.118404 CACGGTTTGGTGGCTGTGT 61.118 57.895 0.00 0.00 37.25 3.72
2314 2784 2.721231 CACGGTTTGGTGGCTGTG 59.279 61.111 0.00 0.00 35.93 3.66
2338 2808 1.901464 TCCTTCGTTTTGGCCTGGC 60.901 57.895 11.05 11.05 0.00 4.85
2339 2809 0.537371 AGTCCTTCGTTTTGGCCTGG 60.537 55.000 3.32 0.00 0.00 4.45
2340 2810 0.593128 CAGTCCTTCGTTTTGGCCTG 59.407 55.000 3.32 0.00 0.00 4.85
2341 2811 1.172812 GCAGTCCTTCGTTTTGGCCT 61.173 55.000 3.32 0.00 0.00 5.19
2342 2812 1.285950 GCAGTCCTTCGTTTTGGCC 59.714 57.895 0.00 0.00 0.00 5.36
2343 2813 0.040067 CTGCAGTCCTTCGTTTTGGC 60.040 55.000 5.25 0.00 0.00 4.52
2344 2814 0.040067 GCTGCAGTCCTTCGTTTTGG 60.040 55.000 16.64 0.00 0.00 3.28
2345 2815 0.040067 GGCTGCAGTCCTTCGTTTTG 60.040 55.000 16.64 0.00 0.00 2.44
2346 2816 0.179018 AGGCTGCAGTCCTTCGTTTT 60.179 50.000 16.31 0.00 0.00 2.43
2347 2817 0.886490 CAGGCTGCAGTCCTTCGTTT 60.886 55.000 22.31 0.00 0.00 3.60
2348 2818 1.302033 CAGGCTGCAGTCCTTCGTT 60.302 57.895 22.31 0.00 0.00 3.85
2349 2819 1.758440 TTCAGGCTGCAGTCCTTCGT 61.758 55.000 22.31 0.00 0.00 3.85
2350 2820 1.004560 TTCAGGCTGCAGTCCTTCG 60.005 57.895 22.31 14.56 0.00 3.79
2436 2909 4.041723 CCAAATCTTGTCAACACGGAAAC 58.958 43.478 0.00 0.00 0.00 2.78
2445 2918 3.636300 CACAACCTCCCAAATCTTGTCAA 59.364 43.478 0.00 0.00 0.00 3.18
2471 2944 1.978782 GAAAAGGCTTGCATTTCGACG 59.021 47.619 0.00 0.00 0.00 5.12
2491 2964 4.559063 CCCTGCCCATGGAGAGCG 62.559 72.222 15.22 4.97 0.00 5.03
2524 3005 4.622456 CAACCGCACACCGCCAAC 62.622 66.667 0.00 0.00 37.30 3.77
2542 3023 6.256321 GGTTATGCAATTTCACTATTGGCTTG 59.744 38.462 0.00 0.00 36.30 4.01
2543 3024 6.070881 TGGTTATGCAATTTCACTATTGGCTT 60.071 34.615 0.00 0.00 36.30 4.35
2544 3025 5.421693 TGGTTATGCAATTTCACTATTGGCT 59.578 36.000 0.00 0.00 36.30 4.75
2545 3026 5.659463 TGGTTATGCAATTTCACTATTGGC 58.341 37.500 0.00 0.00 36.30 4.52
2551 3032 8.916062 TGAATATGATGGTTATGCAATTTCACT 58.084 29.630 0.00 0.00 0.00 3.41
2610 3107 8.929260 TCATGATAGAAATTTGTGGAGCATAT 57.071 30.769 0.00 0.00 0.00 1.78
2664 3161 7.503566 TCCAAGAAATGTTCAATCAGAAGTCTT 59.496 33.333 0.00 0.00 36.78 3.01
2705 3202 2.886523 TGCAAAAGTGAAGAGACCCATG 59.113 45.455 0.00 0.00 0.00 3.66
2710 3207 4.453819 ACATAGCTGCAAAAGTGAAGAGAC 59.546 41.667 1.02 0.00 30.87 3.36
2812 3309 5.491323 AGAGGCCTATGAGTATAAAAGGC 57.509 43.478 4.42 3.04 39.97 4.35
3074 3576 3.134574 TCGCAGGTGGTAAAATGAAGT 57.865 42.857 0.00 0.00 0.00 3.01
3085 3587 2.315925 ATAACTGTGATCGCAGGTGG 57.684 50.000 32.21 13.56 40.59 4.61
3352 3854 8.574196 AACATTTGCTTGTAAGACAACATAAC 57.426 30.769 0.00 0.00 33.96 1.89
3358 3860 7.283625 ACCATAACATTTGCTTGTAAGACAA 57.716 32.000 0.00 0.00 36.54 3.18
3480 3984 6.198650 TCATACAAGCCATATTGCATATGC 57.801 37.500 21.09 21.09 40.96 3.14
3481 3985 6.695713 GCATCATACAAGCCATATTGCATATG 59.304 38.462 1.13 0.00 41.75 1.78
3482 3986 6.378848 TGCATCATACAAGCCATATTGCATAT 59.621 34.615 1.13 0.00 33.09 1.78
3511 4015 2.036604 TCACGTGTGCTACATTGAGGAA 59.963 45.455 16.51 0.00 0.00 3.36
3551 4055 6.309009 CCAGCATAGCAGTTCAATAGTATACG 59.691 42.308 0.00 0.00 0.00 3.06
3813 4317 9.774742 CTAAAACATGCCTGACTTTTTCTATAC 57.225 33.333 0.00 0.00 0.00 1.47
3818 4322 5.920840 GGTCTAAAACATGCCTGACTTTTTC 59.079 40.000 0.00 0.00 0.00 2.29
3870 4374 0.462581 GTGCGATCATCTCTTGCCCA 60.463 55.000 0.00 0.00 0.00 5.36
3873 4377 1.329906 CCTTGTGCGATCATCTCTTGC 59.670 52.381 0.00 0.00 0.00 4.01
3874 4378 1.938577 CCCTTGTGCGATCATCTCTTG 59.061 52.381 0.00 0.00 0.00 3.02
3877 4381 0.179000 ACCCCTTGTGCGATCATCTC 59.821 55.000 0.00 0.00 0.00 2.75
3888 4392 6.674419 AGAGAGAGTATTTCATAACCCCTTGT 59.326 38.462 0.00 0.00 0.00 3.16
3889 4393 7.130681 AGAGAGAGTATTTCATAACCCCTTG 57.869 40.000 0.00 0.00 0.00 3.61
4019 4567 2.832129 TGTAAAGGCAGTCCCTCAGTAG 59.168 50.000 0.00 0.00 45.62 2.57
4023 4571 2.054799 AGTTGTAAAGGCAGTCCCTCA 58.945 47.619 0.00 0.00 45.62 3.86
4032 4580 7.529880 AATATGTGTACGTAGTTGTAAAGGC 57.470 36.000 0.00 0.00 37.78 4.35
4127 4675 2.033372 GGTGACCCCCTTTTCGAAAAA 58.967 47.619 22.67 4.92 0.00 1.94
4128 4676 1.215924 AGGTGACCCCCTTTTCGAAAA 59.784 47.619 21.35 21.35 0.00 2.29
4129 4677 0.848053 AGGTGACCCCCTTTTCGAAA 59.152 50.000 6.47 6.47 0.00 3.46
4130 4678 0.399075 GAGGTGACCCCCTTTTCGAA 59.601 55.000 0.00 0.00 34.03 3.71
4131 4679 1.823169 CGAGGTGACCCCCTTTTCGA 61.823 60.000 0.00 0.00 34.03 3.71
4132 4680 1.375523 CGAGGTGACCCCCTTTTCG 60.376 63.158 0.00 0.00 34.03 3.46
4133 4681 1.002502 CCGAGGTGACCCCCTTTTC 60.003 63.158 0.00 0.00 34.03 2.29
4134 4682 3.167414 CCGAGGTGACCCCCTTTT 58.833 61.111 0.00 0.00 34.03 2.27
4135 4683 3.647771 GCCGAGGTGACCCCCTTT 61.648 66.667 0.00 0.00 34.03 3.11
4140 4688 3.775654 CAGAGGCCGAGGTGACCC 61.776 72.222 0.00 0.00 0.00 4.46
4141 4689 4.459089 GCAGAGGCCGAGGTGACC 62.459 72.222 0.00 0.00 0.00 4.02
4142 4690 2.914777 GATGCAGAGGCCGAGGTGAC 62.915 65.000 0.00 0.00 40.13 3.67
4143 4691 2.685017 ATGCAGAGGCCGAGGTGA 60.685 61.111 0.00 0.00 40.13 4.02
4144 4692 2.202987 GATGCAGAGGCCGAGGTG 60.203 66.667 0.00 0.00 40.13 4.00
4145 4693 2.685017 TGATGCAGAGGCCGAGGT 60.685 61.111 0.00 0.00 40.13 3.85
4146 4694 1.964608 TTCTGATGCAGAGGCCGAGG 61.965 60.000 0.00 0.00 41.75 4.63
4147 4695 0.809241 GTTCTGATGCAGAGGCCGAG 60.809 60.000 0.00 0.00 41.75 4.63
4148 4696 1.219124 GTTCTGATGCAGAGGCCGA 59.781 57.895 0.00 0.00 41.75 5.54
4149 4697 2.169789 CGTTCTGATGCAGAGGCCG 61.170 63.158 0.00 0.00 41.75 6.13
4150 4698 0.179062 ATCGTTCTGATGCAGAGGCC 60.179 55.000 0.00 0.00 41.75 5.19
4151 4699 3.376218 ATCGTTCTGATGCAGAGGC 57.624 52.632 0.00 0.00 41.75 4.70
4159 4707 1.502231 GCCGTATGCATCGTTCTGAT 58.498 50.000 0.19 0.00 40.77 2.90
4160 4708 0.529773 GGCCGTATGCATCGTTCTGA 60.530 55.000 0.19 0.00 43.89 3.27
4161 4709 0.809636 TGGCCGTATGCATCGTTCTG 60.810 55.000 0.19 0.00 43.89 3.02
4162 4710 0.107897 TTGGCCGTATGCATCGTTCT 60.108 50.000 0.19 0.00 43.89 3.01
4163 4711 0.027586 GTTGGCCGTATGCATCGTTC 59.972 55.000 0.19 2.49 43.89 3.95
4164 4712 0.675208 TGTTGGCCGTATGCATCGTT 60.675 50.000 0.19 0.00 43.89 3.85
4165 4713 1.078778 TGTTGGCCGTATGCATCGT 60.079 52.632 0.19 0.00 43.89 3.73
4166 4714 1.089481 ACTGTTGGCCGTATGCATCG 61.089 55.000 0.19 7.03 43.89 3.84
4167 4715 1.597663 GTACTGTTGGCCGTATGCATC 59.402 52.381 0.19 0.00 43.89 3.91
4168 4716 1.663695 GTACTGTTGGCCGTATGCAT 58.336 50.000 3.79 3.79 43.89 3.96
4169 4717 0.391927 GGTACTGTTGGCCGTATGCA 60.392 55.000 0.00 0.00 43.89 3.96
4170 4718 0.107848 AGGTACTGTTGGCCGTATGC 60.108 55.000 0.00 0.00 37.18 3.14
4171 4719 2.396590 AAGGTACTGTTGGCCGTATG 57.603 50.000 0.00 0.00 40.86 2.39
4172 4720 4.080751 ACATAAAGGTACTGTTGGCCGTAT 60.081 41.667 0.00 0.00 40.86 3.06
4173 4721 3.261390 ACATAAAGGTACTGTTGGCCGTA 59.739 43.478 0.00 0.00 40.86 4.02
4174 4722 2.039348 ACATAAAGGTACTGTTGGCCGT 59.961 45.455 0.00 0.00 40.86 5.68
4175 4723 2.418628 CACATAAAGGTACTGTTGGCCG 59.581 50.000 0.00 0.00 40.86 6.13
4176 4724 3.681593 TCACATAAAGGTACTGTTGGCC 58.318 45.455 0.00 0.00 40.86 5.36
4177 4725 4.517453 TGTTCACATAAAGGTACTGTTGGC 59.483 41.667 0.00 0.00 40.86 4.52
4178 4726 6.627395 TTGTTCACATAAAGGTACTGTTGG 57.373 37.500 0.00 0.00 40.86 3.77
4179 4727 7.703328 ACTTTGTTCACATAAAGGTACTGTTG 58.297 34.615 0.00 0.00 40.86 3.33
4180 4728 7.875327 ACTTTGTTCACATAAAGGTACTGTT 57.125 32.000 0.00 0.00 40.86 3.16
4181 4729 7.875327 AACTTTGTTCACATAAAGGTACTGT 57.125 32.000 0.00 0.00 40.86 3.55
4463 5012 4.498009 GGTGACAATTATGGGAGAAATGCG 60.498 45.833 0.00 0.00 0.00 4.73
4536 5085 4.142071 TGAAGAGATAGCAGTTGCCAGTAG 60.142 45.833 0.00 0.00 43.38 2.57
4876 5426 6.492772 AGAGACAGAAAAGATGAGCCAAAAAT 59.507 34.615 0.00 0.00 0.00 1.82
4881 5431 4.040829 TCAAGAGACAGAAAAGATGAGCCA 59.959 41.667 0.00 0.00 0.00 4.75
4911 5461 2.437281 AGATCAAGGCAGATGTTCCGAT 59.563 45.455 0.00 0.00 0.00 4.18
4961 5511 2.264455 AGCCAAGTGATCAAGAGACCT 58.736 47.619 0.00 0.00 0.00 3.85
5064 5615 9.778741 AATGTCGTATGGTAATTAATCATCAGT 57.221 29.630 6.01 0.00 0.00 3.41
5074 5625 8.788806 TCAAAAACTGAATGTCGTATGGTAATT 58.211 29.630 0.00 0.00 0.00 1.40
5142 5693 4.023291 TGGGTTTTCAACTCAAAGAGCTT 58.977 39.130 0.00 0.00 39.37 3.74
5446 6009 7.440523 AGAAATCTTTAACAGGTGTAGCAAG 57.559 36.000 0.00 0.00 0.00 4.01
5461 6024 4.924305 TGCAACAGCAGAAGAAATCTTT 57.076 36.364 0.00 0.00 35.73 2.52
5572 6136 7.429340 GCACTTGGATGAAGTATAAACGAAATG 59.571 37.037 0.00 0.00 43.52 2.32
5798 6362 9.453572 AAGAAATTGTGTCTATGACATGTACAT 57.546 29.630 1.41 1.41 44.63 2.29
5806 6370 9.334693 GATTTGTCAAGAAATTGTGTCTATGAC 57.665 33.333 0.00 0.00 35.72 3.06
5836 6400 0.467844 ATGGCCACTGCAAACTGTGA 60.468 50.000 8.16 0.00 45.73 3.58
5841 6405 0.318955 GTGACATGGCCACTGCAAAC 60.319 55.000 8.16 0.00 40.13 2.93
5846 6410 1.859427 GCACTGTGACATGGCCACTG 61.859 60.000 8.16 10.78 38.76 3.66
5867 6431 2.165030 GTGCTTGCTGATGCCTAACATT 59.835 45.455 0.00 0.00 39.84 2.71
5868 6432 1.747355 GTGCTTGCTGATGCCTAACAT 59.253 47.619 0.00 0.00 43.54 2.71
5869 6433 1.167851 GTGCTTGCTGATGCCTAACA 58.832 50.000 0.00 0.00 38.71 2.41
5870 6434 1.167851 TGTGCTTGCTGATGCCTAAC 58.832 50.000 0.00 0.00 38.71 2.34
5872 6436 1.385528 CATGTGCTTGCTGATGCCTA 58.614 50.000 0.00 0.00 38.71 3.93
5937 6503 2.816087 GCTGGATGACACACAATGAACT 59.184 45.455 0.00 0.00 0.00 3.01
5965 6531 5.219739 ACTATAAGGCTTCCAGATCCAGAA 58.780 41.667 1.30 0.00 0.00 3.02
5994 6560 8.303876 TGCGAATACAACATCTCAGCTTATATA 58.696 33.333 0.00 0.00 0.00 0.86
5995 6561 7.116948 GTGCGAATACAACATCTCAGCTTATAT 59.883 37.037 0.00 0.00 0.00 0.86
6018 6586 0.317854 GTTGAAACGAAGCAGGGTGC 60.318 55.000 0.00 0.00 45.46 5.01
6036 6604 2.478894 CGGCGTCTTTCTATTTGTGTGT 59.521 45.455 0.00 0.00 0.00 3.72
6053 6621 1.179152 AAATTCCCCCTTTAACGGCG 58.821 50.000 4.80 4.80 0.00 6.46
6055 6623 4.081862 GGAGAAAAATTCCCCCTTTAACGG 60.082 45.833 0.00 0.00 0.00 4.44
6070 6638 6.114767 ACAACGTACAGTTAAGGGAGAAAAA 58.885 36.000 0.00 0.00 42.02 1.94
6089 6657 4.092968 GTGCCTCAATTCTACCTAACAACG 59.907 45.833 0.00 0.00 0.00 4.10
6104 6672 4.680237 CTCCGCGTGGTGCCTCAA 62.680 66.667 16.01 0.00 42.08 3.02
6167 6735 2.824880 AAGCAGTGGCCGGTTGGTA 61.825 57.895 1.90 0.00 42.56 3.25
6185 6753 1.557371 TGTGTGTTGAGACCAGAACCA 59.443 47.619 0.00 0.00 0.00 3.67
6233 6801 5.333566 AGGGAAGGGAACACAAAGATTAA 57.666 39.130 0.00 0.00 0.00 1.40
6296 6864 8.453681 TCACAACTCTCCCTCCAGTATATATAA 58.546 37.037 0.00 0.00 0.00 0.98
6332 6984 4.104738 TCAGTGAAAATGACCCTCTTCCTT 59.895 41.667 0.00 0.00 35.16 3.36
6378 7030 7.360438 GCTTCTAACTGATAAACTTGACCACAG 60.360 40.741 0.00 0.00 0.00 3.66
6386 7038 7.179338 TCCTCTCTGCTTCTAACTGATAAACTT 59.821 37.037 0.00 0.00 0.00 2.66
6451 7103 9.597170 CCATATTACAGAATGATGATACAGAGG 57.403 37.037 0.00 0.00 39.69 3.69
6523 7346 9.651913 TCATTATTTTGATAAAGGGTTTGCTTC 57.348 29.630 0.00 0.00 0.00 3.86
6525 7348 8.815912 ACTCATTATTTTGATAAAGGGTTTGCT 58.184 29.630 0.00 0.00 0.00 3.91
6545 7376 7.437713 TGTCATACTTCCTCCATAACTCATT 57.562 36.000 0.00 0.00 0.00 2.57
6559 7390 7.840342 ACATTCTCACTTGATGTCATACTTC 57.160 36.000 0.00 0.00 0.00 3.01
6667 7498 3.601435 GTTCTTTTCTCCTGTCCTAGGC 58.399 50.000 2.96 0.00 46.87 3.93
6786 7617 6.100714 TCCCCTACTTTCGCTCCTTAATAATT 59.899 38.462 0.00 0.00 0.00 1.40
6799 7630 2.882137 TGCTTGTTTTCCCCTACTTTCG 59.118 45.455 0.00 0.00 0.00 3.46
6818 7649 4.756084 AGCTACAACTGAATCTTTGTGC 57.244 40.909 9.92 10.56 36.61 4.57
6905 7739 3.412386 GCAACTGGGAAGTGACAGTAAT 58.588 45.455 0.00 0.00 46.49 1.89
6931 7765 2.431683 GCTCAAGTGGCCAGGTGA 59.568 61.111 5.11 12.26 0.00 4.02
7002 7837 9.555727 AAACAAGCTCAAGTTAGTTCTGTATTA 57.444 29.630 0.00 0.00 0.00 0.98
7083 7919 0.110867 TGCAAACGATGAACGCGAAG 60.111 50.000 15.93 0.00 46.94 3.79
7084 7920 0.383737 GTGCAAACGATGAACGCGAA 60.384 50.000 15.93 0.00 46.94 4.70
7086 7922 0.384230 AAGTGCAAACGATGAACGCG 60.384 50.000 3.53 3.53 43.05 6.01
7087 7923 2.230864 GTAAGTGCAAACGATGAACGC 58.769 47.619 0.00 0.00 43.05 4.84
7088 7924 3.215244 GTGTAAGTGCAAACGATGAACG 58.785 45.455 0.00 0.00 43.05 3.95
7131 7968 9.723447 GCTAGCTGAAAGATTTATAACTTTTCC 57.277 33.333 7.70 0.00 36.63 3.13
7152 7989 6.934048 AGTAATCAGAAAAGGAATGCTAGC 57.066 37.500 8.10 8.10 0.00 3.42
7162 7999 8.669243 GGGAACAATGAGTAGTAATCAGAAAAG 58.331 37.037 6.45 0.00 0.00 2.27
7220 8057 2.913168 GTGATCAGTTCGCTGCTCAGC 61.913 57.143 11.61 11.61 46.86 4.26
7488 8331 2.105477 ACTTCTGCTCTGCCTTTCAAGA 59.895 45.455 0.00 0.00 0.00 3.02
7517 8360 1.152247 AGTCAGGTCAGGTGGCTCA 60.152 57.895 0.00 0.00 0.00 4.26
7563 8416 5.527582 GCTTCTCCTCGCTTTTATTGGATAA 59.472 40.000 0.00 0.00 0.00 1.75
7700 8553 1.290431 TGCTCTTCTCCCTGATCCTCT 59.710 52.381 0.00 0.00 0.00 3.69
7704 8557 1.688197 CTCCTGCTCTTCTCCCTGATC 59.312 57.143 0.00 0.00 0.00 2.92
7705 8558 1.792115 CTCCTGCTCTTCTCCCTGAT 58.208 55.000 0.00 0.00 0.00 2.90
7706 8559 0.975040 GCTCCTGCTCTTCTCCCTGA 60.975 60.000 0.00 0.00 36.03 3.86
7788 8641 2.611800 ATGCTCCTGTGCCTCCCA 60.612 61.111 0.00 0.00 0.00 4.37
7896 8757 1.547901 CCTCTTCCAAGGAACCCAACC 60.548 57.143 0.00 0.00 38.87 3.77
7924 8792 2.032071 CCCCCTCCAACACACGAC 59.968 66.667 0.00 0.00 0.00 4.34
7942 8811 3.505680 TCACACAAAGCAACACCCATATC 59.494 43.478 0.00 0.00 0.00 1.63
7949 8818 2.677836 TGTCTCTCACACAAAGCAACAC 59.322 45.455 0.00 0.00 0.00 3.32
7964 8833 3.580458 AGATGCACCTGTTAGTTGTCTCT 59.420 43.478 0.00 0.00 0.00 3.10
7975 8844 4.560108 GCAAAGAATCAAAGATGCACCTGT 60.560 41.667 0.00 0.00 34.10 4.00
7977 8846 3.830755 AGCAAAGAATCAAAGATGCACCT 59.169 39.130 0.00 0.00 36.30 4.00
8129 9003 7.827236 CAGGACTGGAGTTATTATTGGTAAACA 59.173 37.037 0.00 0.00 0.00 2.83
8130 9004 8.044908 TCAGGACTGGAGTTATTATTGGTAAAC 58.955 37.037 0.00 0.00 0.00 2.01
8146 9023 3.386078 GCTAATCTGACATCAGGACTGGA 59.614 47.826 8.99 0.00 43.91 3.86
8148 9025 3.726607 GGCTAATCTGACATCAGGACTG 58.273 50.000 8.99 0.00 43.91 3.51
8151 9028 1.069204 GCGGCTAATCTGACATCAGGA 59.931 52.381 8.99 0.00 43.91 3.86
8152 9029 1.202568 TGCGGCTAATCTGACATCAGG 60.203 52.381 8.99 0.00 43.91 3.86
8240 9139 1.525197 TCGCAAAATGACACTGTCGAC 59.475 47.619 9.11 9.11 34.95 4.20
8252 9151 1.156736 CAGAACCGAGGTCGCAAAAT 58.843 50.000 0.00 0.00 38.18 1.82
8254 9153 0.599204 GACAGAACCGAGGTCGCAAA 60.599 55.000 0.00 0.00 38.18 3.68
8286 9185 4.837972 AGGCAGAAAGAAATCTACCACTC 58.162 43.478 0.00 0.00 35.61 3.51
8309 9208 3.057019 CGCTTGCTGTTAAGACACAGTA 58.943 45.455 2.95 0.00 45.31 2.74
8310 9209 1.867233 CGCTTGCTGTTAAGACACAGT 59.133 47.619 2.95 0.00 45.31 3.55
8319 9218 2.027192 AGGGAAGATTCGCTTGCTGTTA 60.027 45.455 6.34 0.00 46.75 2.41
8326 9225 0.108138 CCGACAGGGAAGATTCGCTT 60.108 55.000 9.23 2.62 46.75 4.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.