Multiple sequence alignment - TraesCS3A01G492100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G492100 chr3A 100.000 5652 0 0 1 5652 719306752 719301101 0.000000e+00 10438.0
1 TraesCS3A01G492100 chr3A 88.908 595 62 3 997 1591 682754838 682754248 0.000000e+00 730.0
2 TraesCS3A01G492100 chr3A 89.792 529 54 0 3416 3944 682747901 682747373 0.000000e+00 678.0
3 TraesCS3A01G492100 chr3A 86.059 373 32 6 4926 5293 719332720 719333077 3.190000e-102 383.0
4 TraesCS3A01G492100 chr3A 96.190 210 3 2 1 206 102870014 102869806 7.010000e-89 339.0
5 TraesCS3A01G492100 chr3A 88.362 232 20 3 4427 4658 719330280 719330504 7.220000e-69 272.0
6 TraesCS3A01G492100 chr3A 89.474 133 8 4 4527 4658 719131336 719131209 4.530000e-36 163.0
7 TraesCS3A01G492100 chr3D 89.625 2159 128 50 3173 5310 589375735 589373652 0.000000e+00 2658.0
8 TraesCS3A01G492100 chr3D 91.393 1127 43 17 711 1811 589378905 589377807 0.000000e+00 1495.0
9 TraesCS3A01G492100 chr3D 88.313 830 71 14 3728 4552 589467105 589467913 0.000000e+00 972.0
10 TraesCS3A01G492100 chr3D 87.755 490 42 8 4241 4730 589409909 589410380 1.780000e-154 556.0
11 TraesCS3A01G492100 chr3D 92.470 332 21 4 5323 5652 589373515 589373186 6.630000e-129 472.0
12 TraesCS3A01G492100 chr3D 81.950 482 47 17 2522 2969 589376835 589376360 6.920000e-99 372.0
13 TraesCS3A01G492100 chr3D 93.939 231 9 2 3 228 568299323 568299553 1.510000e-90 344.0
14 TraesCS3A01G492100 chr3D 88.060 268 24 5 2085 2349 589377655 589377393 1.530000e-80 311.0
15 TraesCS3A01G492100 chr3D 85.305 279 34 4 284 555 589379099 589378821 1.200000e-71 281.0
16 TraesCS3A01G492100 chr3D 79.000 400 28 18 4926 5310 589468757 589469115 7.370000e-54 222.0
17 TraesCS3A01G492100 chr3D 89.222 167 13 2 2354 2520 589377047 589376886 2.670000e-48 204.0
18 TraesCS3A01G492100 chr3D 89.873 79 4 3 2993 3071 589376359 589376285 1.300000e-16 99.0
19 TraesCS3A01G492100 chr3B 89.796 1470 102 28 3365 4832 787480138 787478715 0.000000e+00 1840.0
20 TraesCS3A01G492100 chr3B 88.386 1481 110 34 3358 4832 787852744 787854168 0.000000e+00 1725.0
21 TraesCS3A01G492100 chr3B 88.478 1137 68 33 708 1811 787850043 787851149 0.000000e+00 1315.0
22 TraesCS3A01G492100 chr3B 83.389 1487 152 60 360 1811 787486435 787485009 0.000000e+00 1290.0
23 TraesCS3A01G492100 chr3B 87.165 857 72 21 3760 4612 787938153 787938975 0.000000e+00 939.0
24 TraesCS3A01G492100 chr3B 92.197 346 19 4 4314 4658 788042485 788042823 3.060000e-132 483.0
25 TraesCS3A01G492100 chr3B 85.503 338 27 12 2698 3032 787483398 787483080 3.260000e-87 333.0
26 TraesCS3A01G492100 chr3B 81.402 371 26 18 4955 5318 788043225 788043559 4.340000e-66 263.0
27 TraesCS3A01G492100 chr3B 87.500 152 10 5 2349 2492 787852027 787852177 3.500000e-37 167.0
28 TraesCS3A01G492100 chr3B 87.500 136 10 2 1987 2122 787484914 787484786 3.530000e-32 150.0
29 TraesCS3A01G492100 chr3B 83.140 172 20 4 2698 2860 787852395 787852566 1.270000e-31 148.0
30 TraesCS3A01G492100 chr3B 97.619 42 1 0 4933 4974 787854271 787854312 7.850000e-09 73.1
31 TraesCS3A01G492100 chr7D 95.111 225 7 1 3 223 106115120 106114896 9.010000e-93 351.0
32 TraesCS3A01G492100 chr7D 95.045 222 6 2 3 219 111323310 111323531 1.510000e-90 344.0
33 TraesCS3A01G492100 chr7D 95.283 212 6 1 3 210 569225612 569225823 3.260000e-87 333.0
34 TraesCS3A01G492100 chr7D 95.261 211 6 1 3 209 70701550 70701340 1.170000e-86 331.0
35 TraesCS3A01G492100 chr6D 94.836 213 7 1 3 211 429667169 429666957 4.220000e-86 329.0
36 TraesCS3A01G492100 chr4B 97.312 186 1 1 3 184 653976041 653975856 4.250000e-81 313.0
37 TraesCS3A01G492100 chr1B 92.857 210 12 3 3 210 591561277 591561069 9.200000e-78 302.0
38 TraesCS3A01G492100 chr5A 73.233 467 93 24 1103 1555 659456944 659457392 2.120000e-29 141.0
39 TraesCS3A01G492100 chr4D 80.682 176 33 1 1405 1579 6293225 6293050 9.880000e-28 135.0
40 TraesCS3A01G492100 chrUn 97.826 46 1 0 166 211 31566982 31566937 4.690000e-11 80.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G492100 chr3A 719301101 719306752 5651 True 10438.00 10438 100.00000 1 5652 1 chr3A.!!$R5 5651
1 TraesCS3A01G492100 chr3A 682754248 682754838 590 True 730.00 730 88.90800 997 1591 1 chr3A.!!$R3 594
2 TraesCS3A01G492100 chr3A 682747373 682747901 528 True 678.00 678 89.79200 3416 3944 1 chr3A.!!$R2 528
3 TraesCS3A01G492100 chr3A 719330280 719333077 2797 False 327.50 383 87.21050 4427 5293 2 chr3A.!!$F1 866
4 TraesCS3A01G492100 chr3D 589373186 589379099 5913 True 736.50 2658 88.48725 284 5652 8 chr3D.!!$R1 5368
5 TraesCS3A01G492100 chr3D 589467105 589469115 2010 False 597.00 972 83.65650 3728 5310 2 chr3D.!!$F3 1582
6 TraesCS3A01G492100 chr3B 787938153 787938975 822 False 939.00 939 87.16500 3760 4612 1 chr3B.!!$F1 852
7 TraesCS3A01G492100 chr3B 787478715 787486435 7720 True 903.25 1840 86.54700 360 4832 4 chr3B.!!$R1 4472
8 TraesCS3A01G492100 chr3B 787850043 787854312 4269 False 685.62 1725 89.02460 708 4974 5 chr3B.!!$F2 4266
9 TraesCS3A01G492100 chr3B 788042485 788043559 1074 False 373.00 483 86.79950 4314 5318 2 chr3B.!!$F3 1004


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
106 107 0.033781 AGCGGGCGTGTAAGTGTAAA 59.966 50.0 0.00 0.00 0.00 2.01 F
846 890 0.539986 GGCCCGTCCAGAAGATGTAA 59.460 55.0 0.00 0.00 34.01 2.41 F
1804 1909 0.458260 TGCGCGCTTAGATAGGAACA 59.542 50.0 33.29 3.26 0.00 3.18 F
2971 4729 0.032130 TGTCCGTGACACAAGAGAGC 59.968 55.0 6.37 0.00 37.67 4.09 F
2977 4735 0.034476 TGACACAAGAGAGCTGGCTG 59.966 55.0 0.00 0.00 0.00 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1631 1717 0.321671 CATTCGCCGGATGGATAGGT 59.678 55.0 5.05 0.0 37.49 3.08 R
2202 2414 0.179134 GCCACGGAGCTACTGTACTG 60.179 60.0 0.00 0.0 36.20 2.74 R
2976 4734 0.039472 TAAATTCAGCCAGCCAGCCA 59.961 50.0 0.00 0.0 0.00 4.75 R
4243 8834 0.036765 GGTGGCACCAAGTCGTATGA 60.037 55.0 31.26 0.0 38.42 2.15 R
4976 12222 0.108329 ACGGTGATGGTCGGATGAAC 60.108 55.0 0.00 0.0 0.00 3.18 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.870606 ACGTATGTGCAGTTCGGC 58.129 55.556 0.00 0.00 0.00 5.54
18 19 2.092291 ACGTATGTGCAGTTCGGCG 61.092 57.895 0.00 0.00 36.28 6.46
19 20 2.798501 CGTATGTGCAGTTCGGCGG 61.799 63.158 7.21 0.00 36.28 6.13
20 21 2.817834 TATGTGCAGTTCGGCGGC 60.818 61.111 7.21 2.37 38.79 6.53
46 47 2.168621 CGCACGACGCAGAAGTTG 59.831 61.111 0.00 0.00 42.60 3.16
47 48 2.551270 GCACGACGCAGAAGTTGG 59.449 61.111 0.00 0.00 41.79 3.77
48 49 2.954753 GCACGACGCAGAAGTTGGG 61.955 63.158 0.00 0.00 44.76 4.12
49 50 2.030562 ACGACGCAGAAGTTGGGG 59.969 61.111 0.00 0.00 43.60 4.96
50 51 2.030562 CGACGCAGAAGTTGGGGT 59.969 61.111 0.00 0.00 43.60 4.95
51 52 1.290955 CGACGCAGAAGTTGGGGTA 59.709 57.895 0.00 0.00 43.60 3.69
52 53 0.108329 CGACGCAGAAGTTGGGGTAT 60.108 55.000 0.00 0.00 43.60 2.73
53 54 1.674817 CGACGCAGAAGTTGGGGTATT 60.675 52.381 0.00 0.00 43.60 1.89
54 55 1.737793 GACGCAGAAGTTGGGGTATTG 59.262 52.381 0.00 0.00 43.60 1.90
55 56 1.073284 ACGCAGAAGTTGGGGTATTGT 59.927 47.619 0.00 0.00 43.60 2.71
56 57 2.159382 CGCAGAAGTTGGGGTATTGTT 58.841 47.619 0.00 0.00 36.17 2.83
57 58 2.095263 CGCAGAAGTTGGGGTATTGTTG 60.095 50.000 0.00 0.00 36.17 3.33
58 59 2.352715 GCAGAAGTTGGGGTATTGTTGC 60.353 50.000 0.00 0.00 0.00 4.17
59 60 2.890311 CAGAAGTTGGGGTATTGTTGCA 59.110 45.455 0.00 0.00 0.00 4.08
60 61 3.320541 CAGAAGTTGGGGTATTGTTGCAA 59.679 43.478 0.00 0.00 0.00 4.08
61 62 3.964031 AGAAGTTGGGGTATTGTTGCAAA 59.036 39.130 0.00 0.00 0.00 3.68
62 63 4.407296 AGAAGTTGGGGTATTGTTGCAAAA 59.593 37.500 0.00 0.00 0.00 2.44
63 64 4.972751 AGTTGGGGTATTGTTGCAAAAT 57.027 36.364 0.00 6.41 0.00 1.82
64 65 5.303259 AGTTGGGGTATTGTTGCAAAATT 57.697 34.783 0.00 0.00 0.00 1.82
65 66 6.426646 AGTTGGGGTATTGTTGCAAAATTA 57.573 33.333 0.00 0.00 0.00 1.40
66 67 6.831976 AGTTGGGGTATTGTTGCAAAATTAA 58.168 32.000 0.00 0.00 0.00 1.40
67 68 6.934083 AGTTGGGGTATTGTTGCAAAATTAAG 59.066 34.615 0.00 0.00 0.00 1.85
68 69 6.426646 TGGGGTATTGTTGCAAAATTAAGT 57.573 33.333 0.00 0.00 0.00 2.24
69 70 6.831976 TGGGGTATTGTTGCAAAATTAAGTT 58.168 32.000 0.00 0.00 0.00 2.66
70 71 6.708054 TGGGGTATTGTTGCAAAATTAAGTTG 59.292 34.615 0.00 0.00 0.00 3.16
81 82 7.177498 GCAAAATTAAGTTGCTGCTTTTAGT 57.823 32.000 15.85 0.00 46.31 2.24
82 83 7.283633 GCAAAATTAAGTTGCTGCTTTTAGTC 58.716 34.615 15.85 0.00 46.31 2.59
83 84 7.493313 CAAAATTAAGTTGCTGCTTTTAGTCG 58.507 34.615 0.00 0.00 0.00 4.18
84 85 4.742438 TTAAGTTGCTGCTTTTAGTCGG 57.258 40.909 0.00 0.00 0.00 4.79
85 86 2.543777 AGTTGCTGCTTTTAGTCGGA 57.456 45.000 0.00 0.00 0.00 4.55
86 87 2.417719 AGTTGCTGCTTTTAGTCGGAG 58.582 47.619 0.00 0.00 0.00 4.63
87 88 2.037251 AGTTGCTGCTTTTAGTCGGAGA 59.963 45.455 0.00 0.00 0.00 3.71
88 89 2.370281 TGCTGCTTTTAGTCGGAGAG 57.630 50.000 0.00 0.00 36.95 3.20
89 90 1.003108 GCTGCTTTTAGTCGGAGAGC 58.997 55.000 0.00 0.00 36.95 4.09
90 91 1.272781 CTGCTTTTAGTCGGAGAGCG 58.727 55.000 0.00 0.00 36.95 5.03
91 92 0.108804 TGCTTTTAGTCGGAGAGCGG 60.109 55.000 0.00 0.00 36.95 5.52
92 93 0.806492 GCTTTTAGTCGGAGAGCGGG 60.806 60.000 0.00 0.00 36.95 6.13
93 94 0.806492 CTTTTAGTCGGAGAGCGGGC 60.806 60.000 0.00 0.00 36.95 6.13
94 95 2.552585 TTTTAGTCGGAGAGCGGGCG 62.553 60.000 0.00 0.00 36.95 6.13
95 96 4.790962 TAGTCGGAGAGCGGGCGT 62.791 66.667 0.00 0.00 36.95 5.68
99 100 4.124351 CGGAGAGCGGGCGTGTAA 62.124 66.667 0.00 0.00 0.00 2.41
100 101 2.202756 GGAGAGCGGGCGTGTAAG 60.203 66.667 0.00 0.00 0.00 2.34
101 102 2.572284 GAGAGCGGGCGTGTAAGT 59.428 61.111 0.00 0.00 0.00 2.24
102 103 1.805945 GAGAGCGGGCGTGTAAGTG 60.806 63.158 0.00 0.00 0.00 3.16
103 104 2.048503 GAGCGGGCGTGTAAGTGT 60.049 61.111 0.00 0.00 0.00 3.55
104 105 1.213537 GAGCGGGCGTGTAAGTGTA 59.786 57.895 0.00 0.00 0.00 2.90
105 106 0.388907 GAGCGGGCGTGTAAGTGTAA 60.389 55.000 0.00 0.00 0.00 2.41
106 107 0.033781 AGCGGGCGTGTAAGTGTAAA 59.966 50.000 0.00 0.00 0.00 2.01
107 108 0.867086 GCGGGCGTGTAAGTGTAAAA 59.133 50.000 0.00 0.00 0.00 1.52
108 109 1.465777 GCGGGCGTGTAAGTGTAAAAT 59.534 47.619 0.00 0.00 0.00 1.82
109 110 2.095617 GCGGGCGTGTAAGTGTAAAATT 60.096 45.455 0.00 0.00 0.00 1.82
110 111 3.124976 GCGGGCGTGTAAGTGTAAAATTA 59.875 43.478 0.00 0.00 0.00 1.40
111 112 4.640956 CGGGCGTGTAAGTGTAAAATTAC 58.359 43.478 0.00 0.00 33.42 1.89
112 113 4.435917 CGGGCGTGTAAGTGTAAAATTACC 60.436 45.833 0.98 0.00 32.11 2.85
113 114 4.435917 GGGCGTGTAAGTGTAAAATTACCG 60.436 45.833 0.98 5.56 32.11 4.02
114 115 4.083820 GCGTGTAAGTGTAAAATTACCGC 58.916 43.478 17.18 17.18 40.61 5.68
115 116 4.377226 GCGTGTAAGTGTAAAATTACCGCA 60.377 41.667 22.63 0.00 43.31 5.69
116 117 5.677936 CGTGTAAGTGTAAAATTACCGCAA 58.322 37.500 0.98 0.00 32.11 4.85
117 118 6.134730 CGTGTAAGTGTAAAATTACCGCAAA 58.865 36.000 0.98 0.00 32.11 3.68
118 119 6.085328 CGTGTAAGTGTAAAATTACCGCAAAC 59.915 38.462 0.98 0.00 32.11 2.93
119 120 7.134163 GTGTAAGTGTAAAATTACCGCAAACT 58.866 34.615 0.98 0.00 32.11 2.66
120 121 7.321984 GTGTAAGTGTAAAATTACCGCAAACTC 59.678 37.037 0.98 0.00 32.11 3.01
121 122 6.628919 AAGTGTAAAATTACCGCAAACTCT 57.371 33.333 1.13 0.00 32.72 3.24
122 123 5.997385 AGTGTAAAATTACCGCAAACTCTG 58.003 37.500 1.13 0.00 32.72 3.35
123 124 5.761234 AGTGTAAAATTACCGCAAACTCTGA 59.239 36.000 1.13 0.00 32.72 3.27
124 125 6.430000 AGTGTAAAATTACCGCAAACTCTGAT 59.570 34.615 1.13 0.00 32.72 2.90
125 126 7.604927 AGTGTAAAATTACCGCAAACTCTGATA 59.395 33.333 1.13 0.00 32.72 2.15
126 127 8.231837 GTGTAAAATTACCGCAAACTCTGATAA 58.768 33.333 1.13 0.00 32.72 1.75
127 128 8.952278 TGTAAAATTACCGCAAACTCTGATAAT 58.048 29.630 1.13 0.00 32.72 1.28
128 129 9.783256 GTAAAATTACCGCAAACTCTGATAATT 57.217 29.630 0.00 0.00 0.00 1.40
129 130 8.911247 AAAATTACCGCAAACTCTGATAATTC 57.089 30.769 0.00 0.00 0.00 2.17
130 131 5.712217 TTACCGCAAACTCTGATAATTCG 57.288 39.130 0.00 0.00 0.00 3.34
131 132 3.596214 ACCGCAAACTCTGATAATTCGT 58.404 40.909 0.00 0.00 0.00 3.85
132 133 4.751060 ACCGCAAACTCTGATAATTCGTA 58.249 39.130 0.00 0.00 0.00 3.43
133 134 4.565564 ACCGCAAACTCTGATAATTCGTAC 59.434 41.667 0.00 0.00 0.00 3.67
134 135 4.317139 CCGCAAACTCTGATAATTCGTACG 60.317 45.833 9.53 9.53 0.00 3.67
135 136 4.497966 CGCAAACTCTGATAATTCGTACGA 59.502 41.667 15.28 15.28 0.00 3.43
136 137 5.173312 CGCAAACTCTGATAATTCGTACGAT 59.827 40.000 20.27 7.78 0.00 3.73
137 138 6.291637 CGCAAACTCTGATAATTCGTACGATT 60.292 38.462 20.27 13.09 0.00 3.34
138 139 7.096763 CGCAAACTCTGATAATTCGTACGATTA 60.097 37.037 20.27 18.06 0.00 1.75
139 140 8.537223 GCAAACTCTGATAATTCGTACGATTAA 58.463 33.333 20.27 4.44 0.00 1.40
143 144 9.828852 ACTCTGATAATTCGTACGATTAAGATC 57.171 33.333 20.27 17.16 0.00 2.75
154 155 3.553828 GATTAAGATCGTGGGGGTGAA 57.446 47.619 0.00 0.00 0.00 3.18
155 156 3.881220 GATTAAGATCGTGGGGGTGAAA 58.119 45.455 0.00 0.00 0.00 2.69
156 157 3.791953 TTAAGATCGTGGGGGTGAAAA 57.208 42.857 0.00 0.00 0.00 2.29
157 158 2.200373 AAGATCGTGGGGGTGAAAAG 57.800 50.000 0.00 0.00 0.00 2.27
158 159 1.358152 AGATCGTGGGGGTGAAAAGA 58.642 50.000 0.00 0.00 0.00 2.52
159 160 1.702957 AGATCGTGGGGGTGAAAAGAA 59.297 47.619 0.00 0.00 0.00 2.52
160 161 2.107552 AGATCGTGGGGGTGAAAAGAAA 59.892 45.455 0.00 0.00 0.00 2.52
161 162 2.438800 TCGTGGGGGTGAAAAGAAAA 57.561 45.000 0.00 0.00 0.00 2.29
162 163 2.303175 TCGTGGGGGTGAAAAGAAAAG 58.697 47.619 0.00 0.00 0.00 2.27
163 164 1.339929 CGTGGGGGTGAAAAGAAAAGG 59.660 52.381 0.00 0.00 0.00 3.11
164 165 1.691976 GTGGGGGTGAAAAGAAAAGGG 59.308 52.381 0.00 0.00 0.00 3.95
165 166 1.576272 TGGGGGTGAAAAGAAAAGGGA 59.424 47.619 0.00 0.00 0.00 4.20
166 167 2.181196 TGGGGGTGAAAAGAAAAGGGAT 59.819 45.455 0.00 0.00 0.00 3.85
167 168 3.403051 TGGGGGTGAAAAGAAAAGGGATA 59.597 43.478 0.00 0.00 0.00 2.59
168 169 3.767673 GGGGGTGAAAAGAAAAGGGATAC 59.232 47.826 0.00 0.00 0.00 2.24
169 170 4.412843 GGGGTGAAAAGAAAAGGGATACA 58.587 43.478 0.00 0.00 39.74 2.29
170 171 4.219944 GGGGTGAAAAGAAAAGGGATACAC 59.780 45.833 0.00 0.00 39.74 2.90
171 172 4.082949 GGGTGAAAAGAAAAGGGATACACG 60.083 45.833 0.00 0.00 39.74 4.49
172 173 4.082949 GGTGAAAAGAAAAGGGATACACGG 60.083 45.833 0.00 0.00 39.74 4.94
173 174 4.758165 GTGAAAAGAAAAGGGATACACGGA 59.242 41.667 0.00 0.00 39.74 4.69
174 175 4.758165 TGAAAAGAAAAGGGATACACGGAC 59.242 41.667 0.00 0.00 39.74 4.79
175 176 4.360951 AAAGAAAAGGGATACACGGACA 57.639 40.909 0.00 0.00 39.74 4.02
176 177 3.329929 AGAAAAGGGATACACGGACAC 57.670 47.619 0.00 0.00 39.74 3.67
177 178 2.635915 AGAAAAGGGATACACGGACACA 59.364 45.455 0.00 0.00 39.74 3.72
178 179 2.467566 AAAGGGATACACGGACACAC 57.532 50.000 0.00 0.00 39.74 3.82
179 180 1.344065 AAGGGATACACGGACACACA 58.656 50.000 0.00 0.00 39.74 3.72
180 181 1.344065 AGGGATACACGGACACACAA 58.656 50.000 0.00 0.00 39.74 3.33
181 182 1.695242 AGGGATACACGGACACACAAA 59.305 47.619 0.00 0.00 39.74 2.83
182 183 2.304761 AGGGATACACGGACACACAAAT 59.695 45.455 0.00 0.00 39.74 2.32
183 184 3.516300 AGGGATACACGGACACACAAATA 59.484 43.478 0.00 0.00 39.74 1.40
184 185 3.869246 GGGATACACGGACACACAAATAG 59.131 47.826 0.00 0.00 39.74 1.73
185 186 3.308866 GGATACACGGACACACAAATAGC 59.691 47.826 0.00 0.00 0.00 2.97
186 187 2.543777 ACACGGACACACAAATAGCT 57.456 45.000 0.00 0.00 0.00 3.32
187 188 2.413837 ACACGGACACACAAATAGCTC 58.586 47.619 0.00 0.00 0.00 4.09
188 189 1.390123 CACGGACACACAAATAGCTCG 59.610 52.381 0.00 0.00 0.00 5.03
189 190 0.999406 CGGACACACAAATAGCTCGG 59.001 55.000 0.00 0.00 0.00 4.63
190 191 1.403647 CGGACACACAAATAGCTCGGA 60.404 52.381 0.00 0.00 0.00 4.55
191 192 2.738643 CGGACACACAAATAGCTCGGAT 60.739 50.000 0.00 0.00 0.00 4.18
192 193 3.270877 GGACACACAAATAGCTCGGATT 58.729 45.455 0.00 0.00 0.00 3.01
193 194 3.309954 GGACACACAAATAGCTCGGATTC 59.690 47.826 0.00 0.00 0.00 2.52
194 195 3.932710 GACACACAAATAGCTCGGATTCA 59.067 43.478 0.00 0.00 0.00 2.57
195 196 3.684788 ACACACAAATAGCTCGGATTCAC 59.315 43.478 0.00 0.00 0.00 3.18
196 197 2.930040 ACACAAATAGCTCGGATTCACG 59.070 45.455 0.00 0.00 0.00 4.35
197 198 3.186909 CACAAATAGCTCGGATTCACGA 58.813 45.455 0.00 0.00 41.13 4.35
206 207 3.288809 TCGGATTCACGAGATATGCTG 57.711 47.619 0.00 0.00 38.06 4.41
207 208 1.723542 CGGATTCACGAGATATGCTGC 59.276 52.381 0.00 0.00 35.47 5.25
208 209 2.072298 GGATTCACGAGATATGCTGCC 58.928 52.381 0.00 0.00 0.00 4.85
209 210 2.289320 GGATTCACGAGATATGCTGCCT 60.289 50.000 0.00 0.00 0.00 4.75
210 211 3.056536 GGATTCACGAGATATGCTGCCTA 60.057 47.826 0.00 0.00 0.00 3.93
211 212 4.382470 GGATTCACGAGATATGCTGCCTAT 60.382 45.833 0.00 0.00 0.00 2.57
212 213 5.163509 GGATTCACGAGATATGCTGCCTATA 60.164 44.000 0.00 0.00 0.00 1.31
213 214 5.921962 TTCACGAGATATGCTGCCTATAT 57.078 39.130 0.00 0.00 0.00 0.86
214 215 7.255625 GGATTCACGAGATATGCTGCCTATATA 60.256 40.741 0.00 0.00 0.00 0.86
215 216 7.588497 TTCACGAGATATGCTGCCTATATAT 57.412 36.000 0.00 0.00 0.00 0.86
216 217 8.691661 TTCACGAGATATGCTGCCTATATATA 57.308 34.615 0.00 0.00 0.00 0.86
217 218 8.870075 TCACGAGATATGCTGCCTATATATAT 57.130 34.615 0.00 0.00 0.00 0.86
218 219 9.959721 TCACGAGATATGCTGCCTATATATATA 57.040 33.333 0.00 2.49 0.00 0.86
244 245 9.653287 ATGTATATATCCATTGACGTGGTAAAG 57.347 33.333 0.00 0.00 40.27 1.85
245 246 8.862085 TGTATATATCCATTGACGTGGTAAAGA 58.138 33.333 0.00 0.00 40.27 2.52
246 247 9.871238 GTATATATCCATTGACGTGGTAAAGAT 57.129 33.333 0.00 0.00 40.27 2.40
249 250 8.777865 ATATCCATTGACGTGGTAAAGATATG 57.222 34.615 0.00 0.00 40.27 1.78
250 251 4.814234 TCCATTGACGTGGTAAAGATATGC 59.186 41.667 0.00 0.00 40.27 3.14
251 252 4.024048 CCATTGACGTGGTAAAGATATGCC 60.024 45.833 0.00 0.00 34.46 4.40
252 253 3.897141 TGACGTGGTAAAGATATGCCA 57.103 42.857 0.00 0.00 0.00 4.92
253 254 4.209307 TGACGTGGTAAAGATATGCCAA 57.791 40.909 0.00 0.00 32.26 4.52
254 255 4.580868 TGACGTGGTAAAGATATGCCAAA 58.419 39.130 0.00 0.00 32.26 3.28
255 256 5.004448 TGACGTGGTAAAGATATGCCAAAA 58.996 37.500 0.00 0.00 32.26 2.44
256 257 5.123186 TGACGTGGTAAAGATATGCCAAAAG 59.877 40.000 0.00 0.00 32.26 2.27
257 258 5.250200 ACGTGGTAAAGATATGCCAAAAGA 58.750 37.500 0.00 0.00 32.26 2.52
258 259 5.708230 ACGTGGTAAAGATATGCCAAAAGAA 59.292 36.000 0.00 0.00 32.26 2.52
259 260 6.207810 ACGTGGTAAAGATATGCCAAAAGAAA 59.792 34.615 0.00 0.00 32.26 2.52
260 261 7.093945 ACGTGGTAAAGATATGCCAAAAGAAAT 60.094 33.333 0.00 0.00 32.26 2.17
261 262 7.759433 CGTGGTAAAGATATGCCAAAAGAAATT 59.241 33.333 0.00 0.00 32.26 1.82
262 263 9.435688 GTGGTAAAGATATGCCAAAAGAAATTT 57.564 29.630 0.00 0.00 32.26 1.82
263 264 9.651913 TGGTAAAGATATGCCAAAAGAAATTTC 57.348 29.630 10.33 10.33 0.00 2.17
264 265 8.807581 GGTAAAGATATGCCAAAAGAAATTTCG 58.192 33.333 12.42 0.00 0.00 3.46
265 266 9.353999 GTAAAGATATGCCAAAAGAAATTTCGT 57.646 29.630 12.42 6.67 0.00 3.85
266 267 8.831715 AAAGATATGCCAAAAGAAATTTCGTT 57.168 26.923 12.80 12.80 0.00 3.85
267 268 7.816945 AGATATGCCAAAAGAAATTTCGTTG 57.183 32.000 18.17 20.10 0.00 4.10
268 269 7.601856 AGATATGCCAAAAGAAATTTCGTTGA 58.398 30.769 26.38 15.23 32.36 3.18
269 270 5.905480 ATGCCAAAAGAAATTTCGTTGAC 57.095 34.783 26.38 20.08 32.36 3.18
270 271 4.116238 TGCCAAAAGAAATTTCGTTGACC 58.884 39.130 26.38 19.82 32.36 4.02
271 272 3.493129 GCCAAAAGAAATTTCGTTGACCC 59.507 43.478 26.38 16.13 32.36 4.46
272 273 4.688021 CCAAAAGAAATTTCGTTGACCCA 58.312 39.130 26.38 0.00 32.36 4.51
273 274 5.296748 CCAAAAGAAATTTCGTTGACCCAT 58.703 37.500 26.38 9.03 32.36 4.00
274 275 6.451393 CCAAAAGAAATTTCGTTGACCCATA 58.549 36.000 26.38 0.00 32.36 2.74
275 276 6.926272 CCAAAAGAAATTTCGTTGACCCATAA 59.074 34.615 26.38 0.00 32.36 1.90
276 277 7.095816 CCAAAAGAAATTTCGTTGACCCATAAC 60.096 37.037 26.38 0.00 32.36 1.89
335 336 5.791141 AGTAATTCCCCCTCACTTAACTTCT 59.209 40.000 0.00 0.00 0.00 2.85
336 337 4.576330 ATTCCCCCTCACTTAACTTCTG 57.424 45.455 0.00 0.00 0.00 3.02
344 345 5.050295 CCCTCACTTAACTTCTGTTTCGAAC 60.050 44.000 0.00 0.00 37.59 3.95
485 493 4.462483 TGGTTGAGATATGCCAAAAGGAAC 59.538 41.667 0.00 0.00 0.00 3.62
509 517 2.159707 CGTTGACCCGTTGCTAGATTTG 60.160 50.000 0.00 0.00 0.00 2.32
510 518 2.107950 TGACCCGTTGCTAGATTTGG 57.892 50.000 0.00 0.00 0.00 3.28
520 528 6.458342 CCGTTGCTAGATTTGGAGGAATTAAC 60.458 42.308 0.00 0.00 0.00 2.01
522 530 7.475840 GTTGCTAGATTTGGAGGAATTAACAG 58.524 38.462 0.00 0.00 0.00 3.16
523 531 6.721318 TGCTAGATTTGGAGGAATTAACAGT 58.279 36.000 0.00 0.00 0.00 3.55
524 532 7.857456 TGCTAGATTTGGAGGAATTAACAGTA 58.143 34.615 0.00 0.00 0.00 2.74
526 534 9.174166 GCTAGATTTGGAGGAATTAACAGTAAA 57.826 33.333 0.00 0.00 0.00 2.01
529 537 9.981460 AGATTTGGAGGAATTAACAGTAAAGAT 57.019 29.630 0.00 0.00 0.00 2.40
546 554 9.901724 CAGTAAAGATTAATTGTGTTAGCTACG 57.098 33.333 0.00 0.00 0.00 3.51
547 555 9.865321 AGTAAAGATTAATTGTGTTAGCTACGA 57.135 29.630 0.00 0.00 0.00 3.43
549 557 8.773404 AAAGATTAATTGTGTTAGCTACGAGT 57.227 30.769 0.00 0.00 0.00 4.18
550 558 9.865321 AAAGATTAATTGTGTTAGCTACGAGTA 57.135 29.630 0.00 0.00 0.00 2.59
551 559 8.853469 AGATTAATTGTGTTAGCTACGAGTAC 57.147 34.615 0.00 0.00 0.00 2.73
552 560 8.464404 AGATTAATTGTGTTAGCTACGAGTACA 58.536 33.333 0.00 0.00 0.00 2.90
553 561 9.245962 GATTAATTGTGTTAGCTACGAGTACAT 57.754 33.333 0.00 0.00 0.00 2.29
554 562 8.624701 TTAATTGTGTTAGCTACGAGTACATC 57.375 34.615 0.00 0.00 0.00 3.06
563 571 3.946950 CGAGTACATCGTCATGGCT 57.053 52.632 0.00 0.00 46.62 4.75
565 573 2.651701 CGAGTACATCGTCATGGCTAC 58.348 52.381 0.00 0.00 46.62 3.58
566 574 2.032924 CGAGTACATCGTCATGGCTACA 59.967 50.000 0.00 0.00 46.62 2.74
567 575 3.488553 CGAGTACATCGTCATGGCTACAA 60.489 47.826 0.00 0.00 46.62 2.41
571 579 4.621068 ACATCGTCATGGCTACAAAATG 57.379 40.909 0.00 0.00 33.82 2.32
573 581 3.066291 TCGTCATGGCTACAAAATGGT 57.934 42.857 0.00 0.00 0.00 3.55
576 584 5.189928 TCGTCATGGCTACAAAATGGTTAT 58.810 37.500 0.00 0.00 0.00 1.89
583 591 6.919721 TGGCTACAAAATGGTTATTTCTGAC 58.080 36.000 0.00 0.00 35.50 3.51
605 613 9.626045 CTGACAAAATAATTTCCCTTCACTTAC 57.374 33.333 0.00 0.00 0.00 2.34
619 660 7.794683 TCCCTTCACTTACCTGGATAAGATTAT 59.205 37.037 17.33 0.00 35.96 1.28
701 742 8.934507 AAATACGATTTTGTTCCAAGAAAACA 57.065 26.923 0.00 0.00 34.57 2.83
703 744 8.742554 ATACGATTTTGTTCCAAGAAAACATC 57.257 30.769 0.00 0.00 36.57 3.06
704 745 5.983118 ACGATTTTGTTCCAAGAAAACATCC 59.017 36.000 0.00 0.00 36.57 3.51
709 750 5.514274 TGTTCCAAGAAAACATCCAAGAC 57.486 39.130 0.00 0.00 31.90 3.01
757 798 4.698304 CCATTGCTTGATTTGCAGGAATTT 59.302 37.500 0.00 0.00 41.71 1.82
758 799 5.182380 CCATTGCTTGATTTGCAGGAATTTT 59.818 36.000 0.00 0.00 41.71 1.82
843 887 2.989639 TGGCCCGTCCAGAAGATG 59.010 61.111 0.00 0.00 40.72 2.90
844 888 1.918293 TGGCCCGTCCAGAAGATGT 60.918 57.895 0.00 0.00 40.72 3.06
845 889 0.616395 TGGCCCGTCCAGAAGATGTA 60.616 55.000 0.00 0.00 40.72 2.29
846 890 0.539986 GGCCCGTCCAGAAGATGTAA 59.460 55.000 0.00 0.00 34.01 2.41
879 923 0.738412 ACCGCCGTCCACGATAAAAG 60.738 55.000 0.00 0.00 43.02 2.27
953 1010 1.453928 GCTCCCCCAAAATCCTCCG 60.454 63.158 0.00 0.00 0.00 4.63
960 1017 0.811616 CCAAAATCCTCCGCTCTCCG 60.812 60.000 0.00 0.00 0.00 4.63
1059 1136 3.790437 ATGGCCCTGCTCCTCGTG 61.790 66.667 0.00 0.00 0.00 4.35
1619 1705 5.505181 TCTTCAGGCCTTAATTCTGTTCT 57.495 39.130 0.00 0.00 0.00 3.01
1620 1706 6.620877 TCTTCAGGCCTTAATTCTGTTCTA 57.379 37.500 0.00 0.00 0.00 2.10
1621 1707 6.407202 TCTTCAGGCCTTAATTCTGTTCTAC 58.593 40.000 0.00 0.00 0.00 2.59
1622 1708 5.755409 TCAGGCCTTAATTCTGTTCTACA 57.245 39.130 0.00 0.00 0.00 2.74
1623 1709 6.121776 TCAGGCCTTAATTCTGTTCTACAA 57.878 37.500 0.00 0.00 0.00 2.41
1624 1710 6.721318 TCAGGCCTTAATTCTGTTCTACAAT 58.279 36.000 0.00 0.00 0.00 2.71
1625 1711 6.823689 TCAGGCCTTAATTCTGTTCTACAATC 59.176 38.462 0.00 0.00 0.00 2.67
1626 1712 6.825721 CAGGCCTTAATTCTGTTCTACAATCT 59.174 38.462 0.00 0.00 0.00 2.40
1627 1713 7.987458 CAGGCCTTAATTCTGTTCTACAATCTA 59.013 37.037 0.00 0.00 0.00 1.98
1628 1714 8.718656 AGGCCTTAATTCTGTTCTACAATCTAT 58.281 33.333 0.00 0.00 0.00 1.98
1629 1715 8.994170 GGCCTTAATTCTGTTCTACAATCTATC 58.006 37.037 0.00 0.00 0.00 2.08
1630 1716 9.771534 GCCTTAATTCTGTTCTACAATCTATCT 57.228 33.333 0.00 0.00 0.00 1.98
1671 1757 2.827555 CGTCTTGATTCTTTGCGTGTC 58.172 47.619 0.00 0.00 0.00 3.67
1715 1815 1.971167 TCCAACCTGCATTGCGGAC 60.971 57.895 19.11 0.00 37.02 4.79
1803 1908 1.721926 GATGCGCGCTTAGATAGGAAC 59.278 52.381 33.29 6.71 0.00 3.62
1804 1909 0.458260 TGCGCGCTTAGATAGGAACA 59.542 50.000 33.29 3.26 0.00 3.18
1805 1910 1.134936 TGCGCGCTTAGATAGGAACAA 60.135 47.619 33.29 2.73 0.00 2.83
1806 1911 1.523095 GCGCGCTTAGATAGGAACAAG 59.477 52.381 26.67 0.00 0.00 3.16
1807 1912 2.798499 GCGCGCTTAGATAGGAACAAGA 60.798 50.000 26.67 0.00 0.00 3.02
1808 1913 3.444916 CGCGCTTAGATAGGAACAAGAA 58.555 45.455 5.56 0.00 0.00 2.52
1809 1914 4.051922 CGCGCTTAGATAGGAACAAGAAT 58.948 43.478 5.56 0.00 0.00 2.40
1810 1915 4.084849 CGCGCTTAGATAGGAACAAGAATG 60.085 45.833 5.56 0.00 0.00 2.67
1811 1916 5.050490 GCGCTTAGATAGGAACAAGAATGA 58.950 41.667 0.00 0.00 0.00 2.57
1812 1917 5.523916 GCGCTTAGATAGGAACAAGAATGAA 59.476 40.000 0.00 0.00 0.00 2.57
1813 1918 6.203723 GCGCTTAGATAGGAACAAGAATGAAT 59.796 38.462 0.00 0.00 0.00 2.57
1814 1919 7.571026 CGCTTAGATAGGAACAAGAATGAATG 58.429 38.462 0.00 0.00 0.00 2.67
1815 1920 7.225538 CGCTTAGATAGGAACAAGAATGAATGT 59.774 37.037 0.00 0.00 0.00 2.71
1816 1921 8.555361 GCTTAGATAGGAACAAGAATGAATGTC 58.445 37.037 0.00 0.00 0.00 3.06
1817 1922 9.605275 CTTAGATAGGAACAAGAATGAATGTCA 57.395 33.333 0.00 0.00 0.00 3.58
1818 1923 7.856145 AGATAGGAACAAGAATGAATGTCAC 57.144 36.000 0.00 0.00 0.00 3.67
1819 1924 6.825721 AGATAGGAACAAGAATGAATGTCACC 59.174 38.462 0.00 0.00 0.00 4.02
1820 1925 4.990526 AGGAACAAGAATGAATGTCACCT 58.009 39.130 0.00 0.00 34.06 4.00
1821 1926 5.388654 AGGAACAAGAATGAATGTCACCTT 58.611 37.500 0.00 0.00 34.74 3.50
1822 1927 5.835280 AGGAACAAGAATGAATGTCACCTTT 59.165 36.000 0.00 0.00 34.74 3.11
1823 1928 6.324770 AGGAACAAGAATGAATGTCACCTTTT 59.675 34.615 0.00 0.00 34.74 2.27
1824 1929 6.986231 GGAACAAGAATGAATGTCACCTTTTT 59.014 34.615 0.00 0.00 0.00 1.94
1863 1971 4.045104 AGAATGTCGTGATCGTGCTAATC 58.955 43.478 0.00 0.00 38.33 1.75
1884 1992 9.332301 CTAATCGTAGAAAAGTGCTAGCTATAC 57.668 37.037 17.23 5.88 43.58 1.47
1885 1993 5.745514 TCGTAGAAAAGTGCTAGCTATACG 58.254 41.667 17.23 17.20 35.92 3.06
1886 1994 5.525012 TCGTAGAAAAGTGCTAGCTATACGA 59.475 40.000 20.23 20.23 39.84 3.43
1888 1996 5.189659 AGAAAAGTGCTAGCTATACGAGG 57.810 43.478 17.23 0.00 0.00 4.63
1890 1998 2.953284 AGTGCTAGCTATACGAGGGA 57.047 50.000 17.23 0.00 0.00 4.20
1922 2034 1.067693 TTAGCAGCACGAACACGATG 58.932 50.000 0.00 0.00 0.00 3.84
1936 2048 2.494471 ACACGATGGATGGAGACGTTTA 59.506 45.455 0.00 0.00 35.05 2.01
1964 2076 9.715121 TTTAAGTAGTTTGTATGTACTCCCTTG 57.285 33.333 0.00 0.00 0.00 3.61
1965 2077 6.295719 AGTAGTTTGTATGTACTCCCTTGG 57.704 41.667 0.00 0.00 0.00 3.61
1966 2078 5.783875 AGTAGTTTGTATGTACTCCCTTGGT 59.216 40.000 0.00 0.00 0.00 3.67
1967 2079 5.578157 AGTTTGTATGTACTCCCTTGGTT 57.422 39.130 0.00 0.00 0.00 3.67
1968 2080 5.557866 AGTTTGTATGTACTCCCTTGGTTC 58.442 41.667 0.00 0.00 0.00 3.62
1969 2081 3.880047 TGTATGTACTCCCTTGGTTCG 57.120 47.619 0.00 0.00 0.00 3.95
1970 2082 2.498481 TGTATGTACTCCCTTGGTTCGG 59.502 50.000 0.00 0.00 0.00 4.30
1971 2083 1.946984 ATGTACTCCCTTGGTTCGGA 58.053 50.000 0.00 0.00 0.00 4.55
1972 2084 1.719529 TGTACTCCCTTGGTTCGGAA 58.280 50.000 0.00 0.00 0.00 4.30
1973 2085 2.262637 TGTACTCCCTTGGTTCGGAAT 58.737 47.619 0.00 0.00 0.00 3.01
1974 2086 2.640826 TGTACTCCCTTGGTTCGGAATT 59.359 45.455 0.00 0.00 0.00 2.17
1975 2087 3.839490 TGTACTCCCTTGGTTCGGAATTA 59.161 43.478 0.00 0.00 0.00 1.40
1976 2088 3.345508 ACTCCCTTGGTTCGGAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
1977 2089 2.910977 ACTCCCTTGGTTCGGAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
1978 2090 3.329814 ACTCCCTTGGTTCGGAATTACTT 59.670 43.478 0.00 0.00 0.00 2.24
1979 2091 4.202535 ACTCCCTTGGTTCGGAATTACTTT 60.203 41.667 0.00 0.00 0.00 2.66
1980 2092 4.732065 TCCCTTGGTTCGGAATTACTTTT 58.268 39.130 0.00 0.00 0.00 2.27
1981 2093 4.521256 TCCCTTGGTTCGGAATTACTTTTG 59.479 41.667 0.00 0.00 0.00 2.44
1982 2094 4.279922 CCCTTGGTTCGGAATTACTTTTGT 59.720 41.667 0.00 0.00 0.00 2.83
1985 2097 6.016943 CCTTGGTTCGGAATTACTTTTGTGTA 60.017 38.462 0.00 0.00 0.00 2.90
2040 2152 5.352016 CCTTTGTGATTTAATGGTTGCCATG 59.648 40.000 0.96 0.00 44.40 3.66
2052 2196 2.545742 GGTTGCCATGTCTGTGGTTTTC 60.546 50.000 0.00 0.00 41.47 2.29
2058 2202 5.163513 GCCATGTCTGTGGTTTTCATTTAG 58.836 41.667 0.00 0.00 41.47 1.85
2059 2203 5.048083 GCCATGTCTGTGGTTTTCATTTAGA 60.048 40.000 0.00 0.00 41.47 2.10
2065 2209 7.656137 TGTCTGTGGTTTTCATTTAGACTAGTC 59.344 37.037 15.41 15.41 36.04 2.59
2069 2213 5.867716 TGGTTTTCATTTAGACTAGTCTCGC 59.132 40.000 28.42 9.16 40.93 5.03
2073 2217 5.440234 TCATTTAGACTAGTCTCGCCATC 57.560 43.478 28.42 0.00 40.93 3.51
2079 2223 8.687292 TTTAGACTAGTCTCGCCATCTATTAA 57.313 34.615 28.42 10.12 40.93 1.40
2080 2224 8.865420 TTAGACTAGTCTCGCCATCTATTAAT 57.135 34.615 28.42 2.11 40.93 1.40
2082 2226 8.865420 AGACTAGTCTCGCCATCTATTAATAA 57.135 34.615 20.00 0.00 34.17 1.40
2215 2427 7.750014 GTCAAAACTACTACAGTACAGTAGCTC 59.250 40.741 21.56 3.83 46.25 4.09
2229 2441 2.857575 TAGCTCCGTGGCAGCATGTG 62.858 60.000 0.00 0.00 39.56 3.21
2274 2494 6.095432 CGGAAGGAGCTAGTAGTACTACTA 57.905 45.833 31.39 31.39 43.98 1.82
2299 2519 2.772739 AGCTTGCGCTGACATTAGG 58.227 52.632 9.73 0.00 46.86 2.69
2314 2534 0.984230 TTAGGGTGAAGCAGAGTGGG 59.016 55.000 0.00 0.00 0.00 4.61
2330 2555 0.546122 TGGGCGATTTATGTCTGGCT 59.454 50.000 0.00 0.00 0.00 4.75
2351 2576 2.026915 TGGGACAGATCATTCAGTGTGG 60.027 50.000 0.00 0.00 0.00 4.17
2352 2577 2.026822 GGGACAGATCATTCAGTGTGGT 60.027 50.000 0.00 0.00 0.00 4.16
2426 3044 2.297315 GCTTTTCCTCTTCCTTGGTTGG 59.703 50.000 0.00 0.00 0.00 3.77
2510 3135 0.620556 AGGACATCCCTCGCACAAAT 59.379 50.000 0.00 0.00 43.31 2.32
2512 3137 2.238646 AGGACATCCCTCGCACAAATAA 59.761 45.455 0.00 0.00 43.31 1.40
2516 3141 5.473504 GGACATCCCTCGCACAAATAATAAT 59.526 40.000 0.00 0.00 0.00 1.28
2520 3145 8.730680 ACATCCCTCGCACAAATAATAATAATC 58.269 33.333 0.00 0.00 0.00 1.75
2525 3199 8.783093 CCTCGCACAAATAATAATAATCCAAGA 58.217 33.333 0.00 0.00 0.00 3.02
2573 3256 1.076332 CGACACGAGGAACCCAAATC 58.924 55.000 0.00 0.00 0.00 2.17
2645 4351 1.295792 TTTTGTCACGCTCCAGACAC 58.704 50.000 0.00 0.00 43.80 3.67
2648 4354 1.373497 GTCACGCTCCAGACACCAG 60.373 63.158 0.00 0.00 34.93 4.00
2683 4399 2.288666 GATGCGGCTAATCAAACAGGA 58.711 47.619 0.00 0.00 0.00 3.86
2727 4476 5.870433 TCGGCTCGTCAATCAAATAACTAAA 59.130 36.000 0.00 0.00 0.00 1.85
2728 4477 6.537301 TCGGCTCGTCAATCAAATAACTAAAT 59.463 34.615 0.00 0.00 0.00 1.40
2729 4478 6.846283 CGGCTCGTCAATCAAATAACTAAATC 59.154 38.462 0.00 0.00 0.00 2.17
2730 4479 6.846283 GGCTCGTCAATCAAATAACTAAATCG 59.154 38.462 0.00 0.00 0.00 3.34
2732 4481 6.711579 TCGTCAATCAAATAACTAAATCGGC 58.288 36.000 0.00 0.00 0.00 5.54
2789 4544 2.933878 AAACTGACGCGACCTGGCAA 62.934 55.000 15.93 0.00 0.00 4.52
2795 4550 2.590092 GCGACCTGGCAATACCCT 59.410 61.111 0.00 0.00 37.83 4.34
2802 4557 2.185867 GGCAATACCCTCGCGACA 59.814 61.111 3.71 0.00 0.00 4.35
2806 4561 1.000607 GCAATACCCTCGCGACATCTA 60.001 52.381 3.71 0.00 0.00 1.98
2807 4562 2.662700 CAATACCCTCGCGACATCTAC 58.337 52.381 3.71 0.00 0.00 2.59
2863 4619 3.220999 TTGACTGGGCTCACCGTCG 62.221 63.158 1.90 0.00 44.64 5.12
2877 4633 1.132844 CGTCGGTGAGTCTGTCTCG 59.867 63.158 0.00 0.00 45.46 4.04
2880 4638 0.250166 TCGGTGAGTCTGTCTCGACA 60.250 55.000 0.00 0.00 45.46 4.35
2892 4650 2.356695 TGTCTCGACACGTCTCTTTCAA 59.643 45.455 0.00 0.00 36.21 2.69
2902 4660 3.937079 ACGTCTCTTTCAAAGTTTCGGTT 59.063 39.130 0.00 0.00 0.00 4.44
2907 4665 4.011023 TCTTTCAAAGTTTCGGTTGTCCA 58.989 39.130 0.00 0.00 0.00 4.02
2913 4671 1.228124 TTTCGGTTGTCCAGCCAGG 60.228 57.895 1.04 0.00 39.47 4.45
2917 4675 4.284550 GTTGTCCAGCCAGGGCCA 62.285 66.667 6.18 0.00 43.21 5.36
2918 4676 3.970410 TTGTCCAGCCAGGGCCAG 61.970 66.667 6.18 0.00 43.21 4.85
2920 4678 4.729918 GTCCAGCCAGGGCCAGTG 62.730 72.222 6.18 0.09 43.17 3.66
2921 4679 4.980592 TCCAGCCAGGGCCAGTGA 62.981 66.667 6.18 0.00 43.17 3.41
2922 4680 4.729918 CCAGCCAGGGCCAGTGAC 62.730 72.222 6.18 0.00 43.17 3.67
2969 4727 1.609072 CTCTGTCCGTGACACAAGAGA 59.391 52.381 14.76 10.19 37.67 3.10
2970 4728 1.609072 TCTGTCCGTGACACAAGAGAG 59.391 52.381 6.37 9.51 37.67 3.20
2971 4729 0.032130 TGTCCGTGACACAAGAGAGC 59.968 55.000 6.37 0.00 37.67 4.09
2972 4730 0.315568 GTCCGTGACACAAGAGAGCT 59.684 55.000 6.37 0.00 32.09 4.09
2973 4731 0.315251 TCCGTGACACAAGAGAGCTG 59.685 55.000 6.37 0.00 0.00 4.24
2974 4732 0.668706 CCGTGACACAAGAGAGCTGG 60.669 60.000 6.37 0.00 0.00 4.85
2975 4733 1.287730 CGTGACACAAGAGAGCTGGC 61.288 60.000 6.37 0.00 0.00 4.85
2976 4734 0.034616 GTGACACAAGAGAGCTGGCT 59.965 55.000 0.00 0.00 0.00 4.75
2977 4735 0.034476 TGACACAAGAGAGCTGGCTG 59.966 55.000 0.00 0.00 0.00 4.85
3034 4793 3.430374 CCCATGACCTTTGTCGGTAGTAG 60.430 52.174 0.00 0.00 44.86 2.57
3035 4794 3.430374 CCATGACCTTTGTCGGTAGTAGG 60.430 52.174 0.00 0.00 44.86 3.18
3036 4795 3.159213 TGACCTTTGTCGGTAGTAGGA 57.841 47.619 0.00 0.00 44.86 2.94
3037 4796 3.087031 TGACCTTTGTCGGTAGTAGGAG 58.913 50.000 0.00 0.00 44.86 3.69
3038 4797 3.087781 GACCTTTGTCGGTAGTAGGAGT 58.912 50.000 0.00 0.00 37.42 3.85
3039 4798 4.263462 TGACCTTTGTCGGTAGTAGGAGTA 60.263 45.833 0.00 0.00 44.86 2.59
3040 4799 4.268359 ACCTTTGTCGGTAGTAGGAGTAG 58.732 47.826 0.00 0.00 34.94 2.57
3041 4800 4.263683 ACCTTTGTCGGTAGTAGGAGTAGT 60.264 45.833 0.00 0.00 34.94 2.73
3048 4807 3.186001 CGGTAGTAGGAGTAGTACATGCG 59.814 52.174 2.52 0.00 36.95 4.73
3062 4821 2.198287 ATGCGCATGGGATGAAGCC 61.198 57.895 24.69 0.00 35.54 4.35
3092 4955 1.078848 GCAGAGGGCGTGTCTCATT 60.079 57.895 0.00 0.00 33.92 2.57
3094 4957 1.813513 CAGAGGGCGTGTCTCATTTT 58.186 50.000 0.00 0.00 33.92 1.82
3095 4958 2.154462 CAGAGGGCGTGTCTCATTTTT 58.846 47.619 0.00 0.00 33.92 1.94
3124 7703 7.196331 AGTACAGAAATGAGCAAAACAAAGTC 58.804 34.615 0.00 0.00 0.00 3.01
3134 7713 6.151985 TGAGCAAAACAAAGTCTCCACTAAAA 59.848 34.615 0.00 0.00 30.14 1.52
3135 7714 6.564328 AGCAAAACAAAGTCTCCACTAAAAG 58.436 36.000 0.00 0.00 30.14 2.27
3139 7718 9.418045 CAAAACAAAGTCTCCACTAAAAGAAAA 57.582 29.630 0.00 0.00 30.14 2.29
3140 7719 8.981724 AAACAAAGTCTCCACTAAAAGAAAAC 57.018 30.769 0.00 0.00 30.14 2.43
3142 7721 9.457436 AACAAAGTCTCCACTAAAAGAAAACTA 57.543 29.630 0.00 0.00 30.14 2.24
3146 7725 9.457436 AAGTCTCCACTAAAAGAAAACTAAACA 57.543 29.630 0.00 0.00 30.14 2.83
3147 7726 9.457436 AGTCTCCACTAAAAGAAAACTAAACAA 57.543 29.630 0.00 0.00 0.00 2.83
3157 7736 7.445900 AAGAAAACTAAACAAAGTTTAGCGC 57.554 32.000 22.67 0.00 46.40 5.92
3158 7737 5.975344 AGAAAACTAAACAAAGTTTAGCGCC 59.025 36.000 22.67 13.09 46.40 6.53
3159 7738 5.509716 AAACTAAACAAAGTTTAGCGCCT 57.490 34.783 22.67 6.99 45.53 5.52
3160 7739 4.744136 ACTAAACAAAGTTTAGCGCCTC 57.256 40.909 22.67 0.00 35.88 4.70
3161 7740 4.386711 ACTAAACAAAGTTTAGCGCCTCT 58.613 39.130 22.67 6.14 35.88 3.69
3162 7741 5.544650 ACTAAACAAAGTTTAGCGCCTCTA 58.455 37.500 22.67 0.00 35.88 2.43
3163 7742 6.171213 ACTAAACAAAGTTTAGCGCCTCTAT 58.829 36.000 22.67 5.01 35.88 1.98
3164 7743 5.959618 AAACAAAGTTTAGCGCCTCTATT 57.040 34.783 2.29 0.00 0.00 1.73
3165 7744 5.547181 AACAAAGTTTAGCGCCTCTATTC 57.453 39.130 2.29 0.00 0.00 1.75
3166 7745 3.939592 ACAAAGTTTAGCGCCTCTATTCC 59.060 43.478 2.29 0.00 0.00 3.01
3167 7746 2.912690 AGTTTAGCGCCTCTATTCCC 57.087 50.000 2.29 0.00 0.00 3.97
3168 7747 2.399580 AGTTTAGCGCCTCTATTCCCT 58.600 47.619 2.29 0.00 0.00 4.20
3169 7748 2.365941 AGTTTAGCGCCTCTATTCCCTC 59.634 50.000 2.29 0.00 0.00 4.30
3170 7749 2.082140 TTAGCGCCTCTATTCCCTCA 57.918 50.000 2.29 0.00 0.00 3.86
3171 7750 2.082140 TAGCGCCTCTATTCCCTCAA 57.918 50.000 2.29 0.00 0.00 3.02
3266 7846 8.721478 TCAATAAAATGTTCTCTTGTCTGCTAC 58.279 33.333 0.00 0.00 0.00 3.58
3317 7899 0.536460 TTTCGGGGAGCAGGAACAAC 60.536 55.000 0.00 0.00 0.00 3.32
3342 7926 5.426689 TGCTATCCTCACTTGAACTGAAT 57.573 39.130 0.00 0.00 0.00 2.57
3343 7927 6.544928 TGCTATCCTCACTTGAACTGAATA 57.455 37.500 0.00 0.00 0.00 1.75
3344 7928 6.577103 TGCTATCCTCACTTGAACTGAATAG 58.423 40.000 0.00 0.00 0.00 1.73
3345 7929 6.381133 TGCTATCCTCACTTGAACTGAATAGA 59.619 38.462 0.00 0.00 0.00 1.98
3346 7930 6.922957 GCTATCCTCACTTGAACTGAATAGAG 59.077 42.308 0.00 0.00 0.00 2.43
3347 7931 5.078411 TCCTCACTTGAACTGAATAGAGC 57.922 43.478 0.00 0.00 0.00 4.09
3348 7932 4.528206 TCCTCACTTGAACTGAATAGAGCA 59.472 41.667 0.00 0.00 0.00 4.26
3349 7933 5.012046 TCCTCACTTGAACTGAATAGAGCAA 59.988 40.000 0.00 0.00 0.00 3.91
3350 7934 5.702670 CCTCACTTGAACTGAATAGAGCAAA 59.297 40.000 0.00 0.00 0.00 3.68
3351 7935 6.205464 CCTCACTTGAACTGAATAGAGCAAAA 59.795 38.462 0.00 0.00 0.00 2.44
3352 7936 7.255242 CCTCACTTGAACTGAATAGAGCAAAAA 60.255 37.037 0.00 0.00 0.00 1.94
3678 8262 2.264794 GCCAACGACGATCACCCT 59.735 61.111 0.00 0.00 0.00 4.34
3681 8265 1.076533 CCAACGACGATCACCCTTCG 61.077 60.000 0.00 0.00 42.20 3.79
3888 8472 0.542333 TCACGTTCAACAGGTTGGGA 59.458 50.000 11.87 0.00 40.78 4.37
3948 8532 1.374758 GGGAACAGGTCAGTCAGCG 60.375 63.158 0.00 0.00 0.00 5.18
3950 8534 2.356313 AACAGGTCAGTCAGCGCG 60.356 61.111 0.00 0.00 0.00 6.86
3968 8555 3.237433 GCGCGTTCTTTGTTATTATGTGC 59.763 43.478 8.43 0.00 0.00 4.57
4011 8598 8.370940 AGTGCATAATTCGCCAGCTATATATAT 58.629 33.333 0.00 0.00 0.00 0.86
4012 8599 9.639601 GTGCATAATTCGCCAGCTATATATATA 57.360 33.333 2.49 2.49 0.00 0.86
4014 8601 9.862371 GCATAATTCGCCAGCTATATATATACT 57.138 33.333 0.00 0.00 0.00 2.12
4019 8606 8.521170 TTCGCCAGCTATATATATACTGTCTT 57.479 34.615 19.73 0.00 0.00 3.01
4068 8655 3.122850 CATGGGCCGAATGGAAGC 58.877 61.111 8.80 0.00 37.49 3.86
4243 8834 6.068010 TGTCCAGGTAATTTGTCAAGTTCAT 58.932 36.000 0.00 0.00 0.00 2.57
4252 8843 7.672983 AATTTGTCAAGTTCATCATACGACT 57.327 32.000 0.00 0.00 0.00 4.18
4257 8848 4.929211 TCAAGTTCATCATACGACTTGGTG 59.071 41.667 13.24 1.39 45.50 4.17
4258 8849 3.262420 AGTTCATCATACGACTTGGTGC 58.738 45.455 0.00 0.00 0.00 5.01
4259 8850 2.309528 TCATCATACGACTTGGTGCC 57.690 50.000 0.00 0.00 0.00 5.01
4260 8851 1.552792 TCATCATACGACTTGGTGCCA 59.447 47.619 0.00 0.00 0.00 4.92
4287 8878 2.253603 GGCTTGCTTTGTATTCTTGCG 58.746 47.619 0.00 0.00 0.00 4.85
4546 9138 1.220206 CTTCGAGGCTGGCATGTCT 59.780 57.895 3.38 0.00 0.00 3.41
4654 9720 5.943416 AGATCAAGATGATAGTCCGTAGAGG 59.057 44.000 0.00 0.00 37.20 3.69
4662 9728 1.511768 GTCCGTAGAGGGCACAGAC 59.488 63.158 0.00 0.00 46.14 3.51
4663 9729 1.681327 TCCGTAGAGGGCACAGACC 60.681 63.158 0.00 0.00 41.52 3.85
4664 9730 2.490217 CGTAGAGGGCACAGACCG 59.510 66.667 0.00 0.00 34.63 4.79
4667 9733 2.044555 TAGAGGGCACAGACCGACG 61.045 63.158 0.00 0.00 34.63 5.12
4670 9736 4.760047 GGGCACAGACCGACGCAT 62.760 66.667 0.00 0.00 0.00 4.73
4671 9737 2.183300 GGCACAGACCGACGCATA 59.817 61.111 0.00 0.00 0.00 3.14
4672 9738 2.165301 GGCACAGACCGACGCATAC 61.165 63.158 0.00 0.00 0.00 2.39
4673 9739 1.445410 GCACAGACCGACGCATACA 60.445 57.895 0.00 0.00 0.00 2.29
4674 9740 0.806102 GCACAGACCGACGCATACAT 60.806 55.000 0.00 0.00 0.00 2.29
4675 9741 1.535226 GCACAGACCGACGCATACATA 60.535 52.381 0.00 0.00 0.00 2.29
4676 9742 2.117137 CACAGACCGACGCATACATAC 58.883 52.381 0.00 0.00 0.00 2.39
4797 10008 0.390340 ATGGTGTGCTCGTGCTACAG 60.390 55.000 11.19 0.00 40.48 2.74
4803 10014 2.186076 GTGCTCGTGCTACAGTACATC 58.814 52.381 11.19 0.00 40.48 3.06
4832 11090 4.904895 AGTGATGTAGGATGGATGGATG 57.095 45.455 0.00 0.00 0.00 3.51
4834 11092 4.909695 AGTGATGTAGGATGGATGGATGAA 59.090 41.667 0.00 0.00 0.00 2.57
4835 11093 5.550796 AGTGATGTAGGATGGATGGATGAAT 59.449 40.000 0.00 0.00 0.00 2.57
4840 11098 6.855667 TGTAGGATGGATGGATGAATGAATT 58.144 36.000 0.00 0.00 0.00 2.17
4841 11099 7.299896 TGTAGGATGGATGGATGAATGAATTT 58.700 34.615 0.00 0.00 0.00 1.82
4842 11100 6.665992 AGGATGGATGGATGAATGAATTTG 57.334 37.500 0.00 0.00 0.00 2.32
4843 11101 5.542635 AGGATGGATGGATGAATGAATTTGG 59.457 40.000 0.00 0.00 0.00 3.28
4844 11102 5.306160 GGATGGATGGATGAATGAATTTGGT 59.694 40.000 0.00 0.00 0.00 3.67
4845 11103 6.494491 GGATGGATGGATGAATGAATTTGGTA 59.506 38.462 0.00 0.00 0.00 3.25
4849 11107 6.494491 GGATGGATGAATGAATTTGGTATCCA 59.506 38.462 0.00 0.00 44.53 3.41
4861 11119 5.771153 TTTGGTATCCATGTATGTGCATG 57.229 39.130 4.36 4.36 44.18 4.06
4864 11122 1.241165 ATCCATGTATGTGCATGCCG 58.759 50.000 16.68 0.00 43.46 5.69
4865 11123 0.818852 TCCATGTATGTGCATGCCGG 60.819 55.000 16.68 0.00 43.46 6.13
4885 11143 1.668419 CCAATGGTCGGCCTAGAAAG 58.332 55.000 7.97 0.00 35.27 2.62
4887 11145 2.555199 CAATGGTCGGCCTAGAAAGAG 58.445 52.381 7.97 0.00 35.27 2.85
4909 12154 1.808945 GACTGCACAAGGAAGTCCATG 59.191 52.381 0.00 0.13 40.34 3.66
4912 12157 1.168714 GCACAAGGAAGTCCATGGAC 58.831 55.000 33.72 33.72 44.86 4.02
4915 12160 0.698238 CAAGGAAGTCCATGGACCCA 59.302 55.000 36.09 3.71 45.59 4.51
4926 12171 2.283101 GGACCCATGCAGCAACCA 60.283 61.111 0.00 0.00 0.00 3.67
4976 12222 5.587844 GTCATCAAGCAGGGCCAATATATAG 59.412 44.000 6.18 0.00 0.00 1.31
4977 12223 5.251468 TCATCAAGCAGGGCCAATATATAGT 59.749 40.000 6.18 0.00 0.00 2.12
4978 12224 5.582950 TCAAGCAGGGCCAATATATAGTT 57.417 39.130 6.18 0.00 0.00 2.24
4979 12225 5.560724 TCAAGCAGGGCCAATATATAGTTC 58.439 41.667 6.18 0.00 0.00 3.01
4980 12226 5.073008 TCAAGCAGGGCCAATATATAGTTCA 59.927 40.000 6.18 0.00 0.00 3.18
4981 12227 5.786121 AGCAGGGCCAATATATAGTTCAT 57.214 39.130 6.18 0.00 0.00 2.57
4983 12232 4.884164 GCAGGGCCAATATATAGTTCATCC 59.116 45.833 6.18 0.00 0.00 3.51
5015 12269 1.367840 GAGTCGACTGGCTGGTTGT 59.632 57.895 25.58 0.00 0.00 3.32
5017 12271 1.961277 GTCGACTGGCTGGTTGTGG 60.961 63.158 8.70 0.00 0.00 4.17
5018 12272 2.669569 CGACTGGCTGGTTGTGGG 60.670 66.667 0.00 0.00 0.00 4.61
5020 12274 1.600916 GACTGGCTGGTTGTGGGTC 60.601 63.158 0.00 0.00 0.00 4.46
5099 12359 2.069775 TCAGGAGGCTAGCTAGGATCT 58.930 52.381 22.10 1.08 0.00 2.75
5108 12376 6.992235 AGGCTAGCTAGGATCTTATTCCTAT 58.008 40.000 22.10 0.00 45.22 2.57
5181 12465 1.966451 CACCTCGGCTGGAAACACC 60.966 63.158 0.00 0.00 35.60 4.16
5272 12558 3.364023 GCGTATAGTACTTTATGCTGGCG 59.636 47.826 22.83 10.71 0.00 5.69
5480 12894 4.103357 CGTTGACTAGGTGGAATAAGTCG 58.897 47.826 0.00 0.00 40.99 4.18
5481 12895 4.142534 CGTTGACTAGGTGGAATAAGTCGA 60.143 45.833 0.00 0.00 40.99 4.20
5485 12899 6.395629 TGACTAGGTGGAATAAGTCGAAAAG 58.604 40.000 0.00 0.00 40.99 2.27
5521 12935 9.669353 CATGATATACACCATAAAAGTGAAAGC 57.331 33.333 0.00 0.00 38.63 3.51
5540 12954 7.858879 GTGAAAGCCAAAACGAAGATAGTTAAA 59.141 33.333 0.00 0.00 0.00 1.52
5546 12960 7.646526 GCCAAAACGAAGATAGTTAAAGTTGTT 59.353 33.333 0.00 0.00 0.00 2.83
5585 12999 2.118313 TGCATCCTGATGTTCCACTG 57.882 50.000 8.79 0.00 40.80 3.66
5586 13000 0.737219 GCATCCTGATGTTCCACTGC 59.263 55.000 8.79 0.00 40.80 4.40
5595 13009 1.668151 GTTCCACTGCGACTCACCC 60.668 63.158 0.00 0.00 0.00 4.61
5612 13026 3.196469 TCACCCAAGAAAATTGCACAACA 59.804 39.130 0.00 0.00 0.00 3.33
5640 13055 4.458295 TCCGTCTAAACTGGACTAACTCAG 59.542 45.833 0.00 0.00 37.07 3.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 2.092291 CGCCGAACTGCACATACGT 61.092 57.895 0.00 0.00 0.00 3.57
1 2 2.695055 CGCCGAACTGCACATACG 59.305 61.111 0.00 0.00 0.00 3.06
2 3 3.089784 CCGCCGAACTGCACATAC 58.910 61.111 0.00 0.00 0.00 2.39
3 4 2.817834 GCCGCCGAACTGCACATA 60.818 61.111 0.00 0.00 0.00 2.29
30 31 2.551270 CCAACTTCTGCGTCGTGC 59.449 61.111 0.00 0.00 46.70 5.34
31 32 2.317609 CCCCAACTTCTGCGTCGTG 61.318 63.158 0.00 0.00 0.00 4.35
32 33 1.466025 TACCCCAACTTCTGCGTCGT 61.466 55.000 0.00 0.00 0.00 4.34
33 34 0.108329 ATACCCCAACTTCTGCGTCG 60.108 55.000 0.00 0.00 0.00 5.12
34 35 1.737793 CAATACCCCAACTTCTGCGTC 59.262 52.381 0.00 0.00 0.00 5.19
35 36 1.073284 ACAATACCCCAACTTCTGCGT 59.927 47.619 0.00 0.00 0.00 5.24
36 37 1.821216 ACAATACCCCAACTTCTGCG 58.179 50.000 0.00 0.00 0.00 5.18
37 38 2.352715 GCAACAATACCCCAACTTCTGC 60.353 50.000 0.00 0.00 0.00 4.26
38 39 2.890311 TGCAACAATACCCCAACTTCTG 59.110 45.455 0.00 0.00 0.00 3.02
39 40 3.237268 TGCAACAATACCCCAACTTCT 57.763 42.857 0.00 0.00 0.00 2.85
40 41 4.329462 TTTGCAACAATACCCCAACTTC 57.671 40.909 0.00 0.00 0.00 3.01
41 42 4.762289 TTTTGCAACAATACCCCAACTT 57.238 36.364 0.00 0.00 0.00 2.66
42 43 4.972751 ATTTTGCAACAATACCCCAACT 57.027 36.364 0.00 0.00 0.00 3.16
43 44 6.708502 ACTTAATTTTGCAACAATACCCCAAC 59.291 34.615 0.00 0.00 0.00 3.77
44 45 6.831976 ACTTAATTTTGCAACAATACCCCAA 58.168 32.000 0.00 0.00 0.00 4.12
45 46 6.426646 ACTTAATTTTGCAACAATACCCCA 57.573 33.333 0.00 0.00 0.00 4.96
46 47 7.127917 CAACTTAATTTTGCAACAATACCCC 57.872 36.000 0.00 0.00 0.00 4.95
58 59 7.358352 CCGACTAAAAGCAGCAACTTAATTTTG 60.358 37.037 0.00 0.00 0.00 2.44
59 60 6.640907 CCGACTAAAAGCAGCAACTTAATTTT 59.359 34.615 0.00 0.00 0.00 1.82
60 61 6.016610 TCCGACTAAAAGCAGCAACTTAATTT 60.017 34.615 0.00 0.00 0.00 1.82
61 62 5.472137 TCCGACTAAAAGCAGCAACTTAATT 59.528 36.000 0.00 0.00 0.00 1.40
62 63 5.001232 TCCGACTAAAAGCAGCAACTTAAT 58.999 37.500 0.00 0.00 0.00 1.40
63 64 4.382291 TCCGACTAAAAGCAGCAACTTAA 58.618 39.130 0.00 0.00 0.00 1.85
64 65 3.994392 CTCCGACTAAAAGCAGCAACTTA 59.006 43.478 0.00 0.00 0.00 2.24
65 66 2.808543 CTCCGACTAAAAGCAGCAACTT 59.191 45.455 0.00 0.00 0.00 2.66
66 67 2.037251 TCTCCGACTAAAAGCAGCAACT 59.963 45.455 0.00 0.00 0.00 3.16
67 68 2.413453 CTCTCCGACTAAAAGCAGCAAC 59.587 50.000 0.00 0.00 0.00 4.17
68 69 2.688507 CTCTCCGACTAAAAGCAGCAA 58.311 47.619 0.00 0.00 0.00 3.91
69 70 1.673033 GCTCTCCGACTAAAAGCAGCA 60.673 52.381 0.00 0.00 33.21 4.41
70 71 1.003108 GCTCTCCGACTAAAAGCAGC 58.997 55.000 0.00 0.00 33.21 5.25
71 72 1.272781 CGCTCTCCGACTAAAAGCAG 58.727 55.000 0.00 0.00 40.02 4.24
72 73 0.108804 CCGCTCTCCGACTAAAAGCA 60.109 55.000 0.00 0.00 40.02 3.91
73 74 0.806492 CCCGCTCTCCGACTAAAAGC 60.806 60.000 0.00 0.00 40.02 3.51
74 75 0.806492 GCCCGCTCTCCGACTAAAAG 60.806 60.000 0.00 0.00 40.02 2.27
75 76 1.217244 GCCCGCTCTCCGACTAAAA 59.783 57.895 0.00 0.00 40.02 1.52
76 77 2.890371 GCCCGCTCTCCGACTAAA 59.110 61.111 0.00 0.00 40.02 1.85
77 78 3.515286 CGCCCGCTCTCCGACTAA 61.515 66.667 0.00 0.00 40.02 2.24
78 79 4.790962 ACGCCCGCTCTCCGACTA 62.791 66.667 0.00 0.00 40.02 2.59
82 83 4.124351 TTACACGCCCGCTCTCCG 62.124 66.667 0.00 0.00 0.00 4.63
83 84 2.202756 CTTACACGCCCGCTCTCC 60.203 66.667 0.00 0.00 0.00 3.71
84 85 1.805945 CACTTACACGCCCGCTCTC 60.806 63.158 0.00 0.00 0.00 3.20
85 86 1.246056 TACACTTACACGCCCGCTCT 61.246 55.000 0.00 0.00 0.00 4.09
86 87 0.388907 TTACACTTACACGCCCGCTC 60.389 55.000 0.00 0.00 0.00 5.03
87 88 0.033781 TTTACACTTACACGCCCGCT 59.966 50.000 0.00 0.00 0.00 5.52
88 89 0.867086 TTTTACACTTACACGCCCGC 59.133 50.000 0.00 0.00 0.00 6.13
89 90 3.817148 AATTTTACACTTACACGCCCG 57.183 42.857 0.00 0.00 0.00 6.13
90 91 4.435917 CGGTAATTTTACACTTACACGCCC 60.436 45.833 3.12 0.00 35.37 6.13
91 92 4.640956 CGGTAATTTTACACTTACACGCC 58.359 43.478 3.12 0.00 35.37 5.68
92 93 4.083820 GCGGTAATTTTACACTTACACGC 58.916 43.478 3.12 0.00 38.74 5.34
93 94 5.266756 TGCGGTAATTTTACACTTACACG 57.733 39.130 3.12 0.00 35.37 4.49
94 95 7.134163 AGTTTGCGGTAATTTTACACTTACAC 58.866 34.615 3.12 0.00 35.37 2.90
95 96 7.227116 AGAGTTTGCGGTAATTTTACACTTACA 59.773 33.333 3.12 0.00 35.37 2.41
96 97 7.532884 CAGAGTTTGCGGTAATTTTACACTTAC 59.467 37.037 3.12 0.00 35.37 2.34
97 98 7.441760 TCAGAGTTTGCGGTAATTTTACACTTA 59.558 33.333 3.12 0.00 35.37 2.24
98 99 6.261381 TCAGAGTTTGCGGTAATTTTACACTT 59.739 34.615 3.12 0.00 35.37 3.16
99 100 5.761234 TCAGAGTTTGCGGTAATTTTACACT 59.239 36.000 3.12 0.00 35.37 3.55
100 101 5.992729 TCAGAGTTTGCGGTAATTTTACAC 58.007 37.500 3.12 0.00 35.37 2.90
101 102 6.811253 ATCAGAGTTTGCGGTAATTTTACA 57.189 33.333 3.12 0.00 35.37 2.41
102 103 9.783256 AATTATCAGAGTTTGCGGTAATTTTAC 57.217 29.630 0.00 0.00 0.00 2.01
103 104 9.997482 GAATTATCAGAGTTTGCGGTAATTTTA 57.003 29.630 0.00 0.00 0.00 1.52
104 105 7.696453 CGAATTATCAGAGTTTGCGGTAATTTT 59.304 33.333 0.00 0.00 0.00 1.82
105 106 7.148306 ACGAATTATCAGAGTTTGCGGTAATTT 60.148 33.333 0.00 0.00 0.00 1.82
106 107 6.315393 ACGAATTATCAGAGTTTGCGGTAATT 59.685 34.615 0.00 0.00 0.00 1.40
107 108 5.815740 ACGAATTATCAGAGTTTGCGGTAAT 59.184 36.000 0.00 0.00 0.00 1.89
108 109 5.172934 ACGAATTATCAGAGTTTGCGGTAA 58.827 37.500 0.00 0.00 0.00 2.85
109 110 4.751060 ACGAATTATCAGAGTTTGCGGTA 58.249 39.130 0.00 0.00 0.00 4.02
110 111 3.596214 ACGAATTATCAGAGTTTGCGGT 58.404 40.909 0.00 0.00 0.00 5.68
111 112 4.317139 CGTACGAATTATCAGAGTTTGCGG 60.317 45.833 10.44 0.00 0.00 5.69
112 113 4.497966 TCGTACGAATTATCAGAGTTTGCG 59.502 41.667 17.11 0.00 0.00 4.85
113 114 5.944049 TCGTACGAATTATCAGAGTTTGC 57.056 39.130 17.11 0.00 0.00 3.68
117 118 9.828852 GATCTTAATCGTACGAATTATCAGAGT 57.171 33.333 23.56 0.00 0.00 3.24
134 135 3.553828 TTCACCCCCACGATCTTAATC 57.446 47.619 0.00 0.00 0.00 1.75
135 136 4.018779 TCTTTTCACCCCCACGATCTTAAT 60.019 41.667 0.00 0.00 0.00 1.40
136 137 3.328343 TCTTTTCACCCCCACGATCTTAA 59.672 43.478 0.00 0.00 0.00 1.85
137 138 2.907696 TCTTTTCACCCCCACGATCTTA 59.092 45.455 0.00 0.00 0.00 2.10
138 139 1.702957 TCTTTTCACCCCCACGATCTT 59.297 47.619 0.00 0.00 0.00 2.40
139 140 1.358152 TCTTTTCACCCCCACGATCT 58.642 50.000 0.00 0.00 0.00 2.75
140 141 2.194201 TTCTTTTCACCCCCACGATC 57.806 50.000 0.00 0.00 0.00 3.69
141 142 2.668144 TTTCTTTTCACCCCCACGAT 57.332 45.000 0.00 0.00 0.00 3.73
142 143 2.303175 CTTTTCTTTTCACCCCCACGA 58.697 47.619 0.00 0.00 0.00 4.35
143 144 1.339929 CCTTTTCTTTTCACCCCCACG 59.660 52.381 0.00 0.00 0.00 4.94
144 145 1.691976 CCCTTTTCTTTTCACCCCCAC 59.308 52.381 0.00 0.00 0.00 4.61
145 146 1.576272 TCCCTTTTCTTTTCACCCCCA 59.424 47.619 0.00 0.00 0.00 4.96
146 147 2.391926 TCCCTTTTCTTTTCACCCCC 57.608 50.000 0.00 0.00 0.00 5.40
147 148 4.219944 GTGTATCCCTTTTCTTTTCACCCC 59.780 45.833 0.00 0.00 0.00 4.95
148 149 4.082949 CGTGTATCCCTTTTCTTTTCACCC 60.083 45.833 0.00 0.00 0.00 4.61
149 150 4.082949 CCGTGTATCCCTTTTCTTTTCACC 60.083 45.833 0.00 0.00 0.00 4.02
150 151 4.758165 TCCGTGTATCCCTTTTCTTTTCAC 59.242 41.667 0.00 0.00 0.00 3.18
151 152 4.758165 GTCCGTGTATCCCTTTTCTTTTCA 59.242 41.667 0.00 0.00 0.00 2.69
152 153 4.758165 TGTCCGTGTATCCCTTTTCTTTTC 59.242 41.667 0.00 0.00 0.00 2.29
153 154 4.517832 GTGTCCGTGTATCCCTTTTCTTTT 59.482 41.667 0.00 0.00 0.00 2.27
154 155 4.070009 GTGTCCGTGTATCCCTTTTCTTT 58.930 43.478 0.00 0.00 0.00 2.52
155 156 3.071892 TGTGTCCGTGTATCCCTTTTCTT 59.928 43.478 0.00 0.00 0.00 2.52
156 157 2.635915 TGTGTCCGTGTATCCCTTTTCT 59.364 45.455 0.00 0.00 0.00 2.52
157 158 2.740447 GTGTGTCCGTGTATCCCTTTTC 59.260 50.000 0.00 0.00 0.00 2.29
158 159 2.105134 TGTGTGTCCGTGTATCCCTTTT 59.895 45.455 0.00 0.00 0.00 2.27
159 160 1.695242 TGTGTGTCCGTGTATCCCTTT 59.305 47.619 0.00 0.00 0.00 3.11
160 161 1.344065 TGTGTGTCCGTGTATCCCTT 58.656 50.000 0.00 0.00 0.00 3.95
161 162 1.344065 TTGTGTGTCCGTGTATCCCT 58.656 50.000 0.00 0.00 0.00 4.20
162 163 2.172851 TTTGTGTGTCCGTGTATCCC 57.827 50.000 0.00 0.00 0.00 3.85
163 164 3.308866 GCTATTTGTGTGTCCGTGTATCC 59.691 47.826 0.00 0.00 0.00 2.59
164 165 4.181578 AGCTATTTGTGTGTCCGTGTATC 58.818 43.478 0.00 0.00 0.00 2.24
165 166 4.181578 GAGCTATTTGTGTGTCCGTGTAT 58.818 43.478 0.00 0.00 0.00 2.29
166 167 3.581755 GAGCTATTTGTGTGTCCGTGTA 58.418 45.455 0.00 0.00 0.00 2.90
167 168 2.413837 GAGCTATTTGTGTGTCCGTGT 58.586 47.619 0.00 0.00 0.00 4.49
168 169 1.390123 CGAGCTATTTGTGTGTCCGTG 59.610 52.381 0.00 0.00 0.00 4.94
169 170 1.671850 CCGAGCTATTTGTGTGTCCGT 60.672 52.381 0.00 0.00 0.00 4.69
170 171 0.999406 CCGAGCTATTTGTGTGTCCG 59.001 55.000 0.00 0.00 0.00 4.79
171 172 2.380084 TCCGAGCTATTTGTGTGTCC 57.620 50.000 0.00 0.00 0.00 4.02
172 173 3.932710 TGAATCCGAGCTATTTGTGTGTC 59.067 43.478 0.00 0.00 0.00 3.67
173 174 3.684788 GTGAATCCGAGCTATTTGTGTGT 59.315 43.478 0.00 0.00 0.00 3.72
174 175 3.242091 CGTGAATCCGAGCTATTTGTGTG 60.242 47.826 0.00 0.00 0.00 3.82
175 176 2.930040 CGTGAATCCGAGCTATTTGTGT 59.070 45.455 0.00 0.00 0.00 3.72
176 177 3.186909 TCGTGAATCCGAGCTATTTGTG 58.813 45.455 0.00 0.00 32.18 3.33
177 178 3.448686 CTCGTGAATCCGAGCTATTTGT 58.551 45.455 7.88 0.00 46.64 2.83
186 187 2.608016 GCAGCATATCTCGTGAATCCGA 60.608 50.000 0.00 0.00 35.22 4.55
187 188 1.723542 GCAGCATATCTCGTGAATCCG 59.276 52.381 0.00 0.00 0.00 4.18
188 189 2.072298 GGCAGCATATCTCGTGAATCC 58.928 52.381 0.00 0.00 0.00 3.01
189 190 3.037431 AGGCAGCATATCTCGTGAATC 57.963 47.619 0.00 0.00 0.00 2.52
190 191 4.815533 ATAGGCAGCATATCTCGTGAAT 57.184 40.909 0.00 0.00 0.00 2.57
191 192 5.921962 ATATAGGCAGCATATCTCGTGAA 57.078 39.130 2.03 0.00 0.00 3.18
192 193 8.870075 ATATATATAGGCAGCATATCTCGTGA 57.130 34.615 2.03 0.00 0.00 4.35
218 219 9.653287 CTTTACCACGTCAATGGATATATACAT 57.347 33.333 4.44 4.44 43.02 2.29
219 220 8.862085 TCTTTACCACGTCAATGGATATATACA 58.138 33.333 0.00 0.00 43.02 2.29
220 221 9.871238 ATCTTTACCACGTCAATGGATATATAC 57.129 33.333 0.00 0.00 43.02 1.47
223 224 9.869757 CATATCTTTACCACGTCAATGGATATA 57.130 33.333 0.00 0.00 43.02 0.86
224 225 7.334421 GCATATCTTTACCACGTCAATGGATAT 59.666 37.037 0.00 0.00 43.02 1.63
225 226 6.649141 GCATATCTTTACCACGTCAATGGATA 59.351 38.462 0.00 0.00 43.02 2.59
226 227 5.470098 GCATATCTTTACCACGTCAATGGAT 59.530 40.000 0.00 0.00 43.02 3.41
227 228 4.814234 GCATATCTTTACCACGTCAATGGA 59.186 41.667 0.00 0.00 43.02 3.41
228 229 4.024048 GGCATATCTTTACCACGTCAATGG 60.024 45.833 0.00 0.00 46.10 3.16
229 230 4.574421 TGGCATATCTTTACCACGTCAATG 59.426 41.667 0.00 0.00 0.00 2.82
230 231 4.776349 TGGCATATCTTTACCACGTCAAT 58.224 39.130 0.00 0.00 0.00 2.57
231 232 4.209307 TGGCATATCTTTACCACGTCAA 57.791 40.909 0.00 0.00 0.00 3.18
232 233 3.897141 TGGCATATCTTTACCACGTCA 57.103 42.857 0.00 0.00 0.00 4.35
233 234 5.353123 TCTTTTGGCATATCTTTACCACGTC 59.647 40.000 0.00 0.00 0.00 4.34
234 235 5.250200 TCTTTTGGCATATCTTTACCACGT 58.750 37.500 0.00 0.00 0.00 4.49
235 236 5.811399 TCTTTTGGCATATCTTTACCACG 57.189 39.130 0.00 0.00 0.00 4.94
236 237 9.435688 AAATTTCTTTTGGCATATCTTTACCAC 57.564 29.630 0.00 0.00 0.00 4.16
237 238 9.651913 GAAATTTCTTTTGGCATATCTTTACCA 57.348 29.630 11.05 0.00 0.00 3.25
238 239 8.807581 CGAAATTTCTTTTGGCATATCTTTACC 58.192 33.333 15.92 0.00 0.00 2.85
239 240 9.353999 ACGAAATTTCTTTTGGCATATCTTTAC 57.646 29.630 15.92 0.00 31.04 2.01
240 241 9.921637 AACGAAATTTCTTTTGGCATATCTTTA 57.078 25.926 15.92 0.00 31.04 1.85
241 242 8.711457 CAACGAAATTTCTTTTGGCATATCTTT 58.289 29.630 15.92 0.00 31.04 2.52
242 243 8.087750 TCAACGAAATTTCTTTTGGCATATCTT 58.912 29.630 20.67 0.00 31.04 2.40
243 244 7.542130 GTCAACGAAATTTCTTTTGGCATATCT 59.458 33.333 20.63 0.00 31.04 1.98
244 245 7.201435 GGTCAACGAAATTTCTTTTGGCATATC 60.201 37.037 24.11 11.32 31.04 1.63
245 246 6.589907 GGTCAACGAAATTTCTTTTGGCATAT 59.410 34.615 24.11 0.00 31.04 1.78
246 247 5.923684 GGTCAACGAAATTTCTTTTGGCATA 59.076 36.000 24.11 9.02 31.04 3.14
247 248 4.749598 GGTCAACGAAATTTCTTTTGGCAT 59.250 37.500 24.11 0.00 31.04 4.40
248 249 4.116238 GGTCAACGAAATTTCTTTTGGCA 58.884 39.130 24.11 9.76 31.04 4.92
249 250 3.493129 GGGTCAACGAAATTTCTTTTGGC 59.507 43.478 20.67 19.71 31.04 4.52
250 251 4.688021 TGGGTCAACGAAATTTCTTTTGG 58.312 39.130 20.67 8.38 31.04 3.28
251 252 7.783209 GTTATGGGTCAACGAAATTTCTTTTG 58.217 34.615 15.92 16.74 32.77 2.44
252 253 7.940178 GTTATGGGTCAACGAAATTTCTTTT 57.060 32.000 15.92 6.38 0.00 2.27
264 265 4.674362 GCCAAATCTTCGTTATGGGTCAAC 60.674 45.833 0.00 0.00 0.00 3.18
265 266 3.442273 GCCAAATCTTCGTTATGGGTCAA 59.558 43.478 0.00 0.00 0.00 3.18
266 267 3.013921 GCCAAATCTTCGTTATGGGTCA 58.986 45.455 0.00 0.00 0.00 4.02
267 268 3.279434 AGCCAAATCTTCGTTATGGGTC 58.721 45.455 0.00 0.00 37.30 4.46
268 269 3.366052 AGCCAAATCTTCGTTATGGGT 57.634 42.857 0.00 0.00 37.08 4.51
269 270 3.247648 CGTAGCCAAATCTTCGTTATGGG 59.752 47.826 0.00 0.00 0.00 4.00
270 271 4.116961 TCGTAGCCAAATCTTCGTTATGG 58.883 43.478 0.00 0.00 0.00 2.74
271 272 5.712217 TTCGTAGCCAAATCTTCGTTATG 57.288 39.130 0.00 0.00 0.00 1.90
272 273 6.920569 ATTTCGTAGCCAAATCTTCGTTAT 57.079 33.333 0.00 0.00 0.00 1.89
273 274 7.459394 CTATTTCGTAGCCAAATCTTCGTTA 57.541 36.000 0.00 0.00 0.00 3.18
274 275 6.345920 CTATTTCGTAGCCAAATCTTCGTT 57.654 37.500 0.00 0.00 0.00 3.85
275 276 5.968387 CTATTTCGTAGCCAAATCTTCGT 57.032 39.130 0.00 0.00 0.00 3.85
312 313 5.880887 CAGAAGTTAAGTGAGGGGGAATTAC 59.119 44.000 0.00 0.00 0.00 1.89
318 319 3.790089 AACAGAAGTTAAGTGAGGGGG 57.210 47.619 0.00 0.00 35.85 5.40
459 467 1.378531 TTGGCATATCTCAACCACGC 58.621 50.000 0.00 0.00 0.00 5.34
466 474 4.635765 CGAAGTTCCTTTTGGCATATCTCA 59.364 41.667 0.00 0.00 40.12 3.27
467 475 4.636206 ACGAAGTTCCTTTTGGCATATCTC 59.364 41.667 0.00 0.00 37.78 2.75
485 493 1.068474 CTAGCAACGGGTCAACGAAG 58.932 55.000 0.00 0.00 37.61 3.79
495 503 2.691409 TCCTCCAAATCTAGCAACGG 57.309 50.000 0.00 0.00 0.00 4.44
497 505 7.121315 ACTGTTAATTCCTCCAAATCTAGCAAC 59.879 37.037 0.00 0.00 0.00 4.17
520 528 9.901724 CGTAGCTAACACAATTAATCTTTACTG 57.098 33.333 0.00 0.00 0.00 2.74
523 531 9.865321 ACTCGTAGCTAACACAATTAATCTTTA 57.135 29.630 0.00 0.00 0.00 1.85
524 532 8.773404 ACTCGTAGCTAACACAATTAATCTTT 57.227 30.769 0.00 0.00 0.00 2.52
526 534 8.464404 TGTACTCGTAGCTAACACAATTAATCT 58.536 33.333 0.00 0.00 0.00 2.40
528 536 9.245962 GATGTACTCGTAGCTAACACAATTAAT 57.754 33.333 0.00 0.00 0.00 1.40
529 537 7.430211 CGATGTACTCGTAGCTAACACAATTAA 59.570 37.037 0.00 0.00 42.56 1.40
530 538 6.908820 CGATGTACTCGTAGCTAACACAATTA 59.091 38.462 0.00 0.00 42.56 1.40
531 539 5.742453 CGATGTACTCGTAGCTAACACAATT 59.258 40.000 0.00 0.00 42.56 2.32
532 540 5.271625 CGATGTACTCGTAGCTAACACAAT 58.728 41.667 0.00 0.00 42.56 2.71
533 541 4.655027 CGATGTACTCGTAGCTAACACAA 58.345 43.478 0.00 0.00 42.56 3.33
534 542 4.268767 CGATGTACTCGTAGCTAACACA 57.731 45.455 0.00 0.00 42.56 3.72
546 554 3.710326 TGTAGCCATGACGATGTACTC 57.290 47.619 0.00 0.00 0.00 2.59
547 555 4.465632 TTTGTAGCCATGACGATGTACT 57.534 40.909 0.00 0.00 0.00 2.73
548 556 5.501715 CATTTTGTAGCCATGACGATGTAC 58.498 41.667 0.00 0.00 0.00 2.90
549 557 4.574421 CCATTTTGTAGCCATGACGATGTA 59.426 41.667 0.00 0.00 0.00 2.29
550 558 3.378112 CCATTTTGTAGCCATGACGATGT 59.622 43.478 0.00 0.00 0.00 3.06
551 559 3.378112 ACCATTTTGTAGCCATGACGATG 59.622 43.478 0.00 0.00 0.00 3.84
552 560 3.620488 ACCATTTTGTAGCCATGACGAT 58.380 40.909 0.00 0.00 0.00 3.73
553 561 3.066291 ACCATTTTGTAGCCATGACGA 57.934 42.857 0.00 0.00 0.00 4.20
554 562 3.848272 AACCATTTTGTAGCCATGACG 57.152 42.857 0.00 0.00 0.00 4.35
555 563 7.489113 CAGAAATAACCATTTTGTAGCCATGAC 59.511 37.037 0.00 0.00 34.44 3.06
556 564 7.395772 TCAGAAATAACCATTTTGTAGCCATGA 59.604 33.333 0.00 0.00 34.44 3.07
557 565 7.489113 GTCAGAAATAACCATTTTGTAGCCATG 59.511 37.037 0.00 0.00 34.44 3.66
558 566 7.178274 TGTCAGAAATAACCATTTTGTAGCCAT 59.822 33.333 0.00 0.00 34.44 4.40
559 567 6.491745 TGTCAGAAATAACCATTTTGTAGCCA 59.508 34.615 0.00 0.00 34.44 4.75
560 568 6.919721 TGTCAGAAATAACCATTTTGTAGCC 58.080 36.000 0.00 0.00 34.44 3.93
561 569 8.810652 TTTGTCAGAAATAACCATTTTGTAGC 57.189 30.769 0.00 0.00 34.44 3.58
576 584 8.923270 AGTGAAGGGAAATTATTTTGTCAGAAA 58.077 29.630 0.00 0.00 0.00 2.52
583 591 8.034804 CCAGGTAAGTGAAGGGAAATTATTTTG 58.965 37.037 0.00 0.00 0.00 2.44
665 706 9.997482 GAACAAAATCGTATTTAATCTAGGCAA 57.003 29.630 0.00 0.00 0.00 4.52
667 708 8.617809 TGGAACAAAATCGTATTTAATCTAGGC 58.382 33.333 0.00 0.00 31.92 3.93
688 729 5.514274 TGTCTTGGATGTTTTCTTGGAAC 57.486 39.130 0.00 0.00 0.00 3.62
689 730 5.509501 GCATGTCTTGGATGTTTTCTTGGAA 60.510 40.000 0.00 0.00 0.00 3.53
694 735 3.499338 TGGCATGTCTTGGATGTTTTCT 58.501 40.909 0.00 0.00 0.00 2.52
695 736 3.940209 TGGCATGTCTTGGATGTTTTC 57.060 42.857 0.00 0.00 0.00 2.29
697 738 4.503643 CCTTTTGGCATGTCTTGGATGTTT 60.504 41.667 0.00 0.00 0.00 2.83
698 739 3.007182 CCTTTTGGCATGTCTTGGATGTT 59.993 43.478 0.00 0.00 0.00 2.71
699 740 2.564062 CCTTTTGGCATGTCTTGGATGT 59.436 45.455 0.00 0.00 0.00 3.06
700 741 2.827322 TCCTTTTGGCATGTCTTGGATG 59.173 45.455 0.00 0.00 40.12 3.51
701 742 3.173953 TCCTTTTGGCATGTCTTGGAT 57.826 42.857 0.00 0.00 40.12 3.41
703 744 3.967332 ATTCCTTTTGGCATGTCTTGG 57.033 42.857 0.00 0.00 40.12 3.61
704 745 4.386652 CGAAATTCCTTTTGGCATGTCTTG 59.613 41.667 0.00 0.00 40.12 3.02
709 750 4.150451 GTCAACGAAATTCCTTTTGGCATG 59.850 41.667 0.00 0.00 40.12 4.06
843 887 1.519246 GTGGGCGGGGTCTACTTAC 59.481 63.158 0.00 0.00 0.00 2.34
844 888 1.686800 GGTGGGCGGGGTCTACTTA 60.687 63.158 0.00 0.00 0.00 2.24
845 889 3.007323 GGTGGGCGGGGTCTACTT 61.007 66.667 0.00 0.00 0.00 2.24
978 1055 2.097629 TGTCGGTCGACTGATTGATCTC 59.902 50.000 28.76 14.96 44.80 2.75
982 1059 2.606108 CATTGTCGGTCGACTGATTGA 58.394 47.619 28.76 17.75 44.80 2.57
1251 1328 2.101770 CCGTCGCCGAAGTAGACC 59.898 66.667 0.00 0.00 35.63 3.85
1398 1475 2.818274 GCGTCCGTCATGTTCCCC 60.818 66.667 0.00 0.00 0.00 4.81
1619 1705 7.061054 CCGGATGGATAGGTAGATAGATTGTA 58.939 42.308 0.00 0.00 37.49 2.41
1620 1706 5.894393 CCGGATGGATAGGTAGATAGATTGT 59.106 44.000 0.00 0.00 37.49 2.71
1621 1707 5.221342 GCCGGATGGATAGGTAGATAGATTG 60.221 48.000 5.05 0.00 37.49 2.67
1622 1708 4.896482 GCCGGATGGATAGGTAGATAGATT 59.104 45.833 5.05 0.00 37.49 2.40
1623 1709 4.475345 GCCGGATGGATAGGTAGATAGAT 58.525 47.826 5.05 0.00 37.49 1.98
1624 1710 3.684697 CGCCGGATGGATAGGTAGATAGA 60.685 52.174 5.05 0.00 37.49 1.98
1625 1711 2.619177 CGCCGGATGGATAGGTAGATAG 59.381 54.545 5.05 0.00 37.49 2.08
1626 1712 2.240414 TCGCCGGATGGATAGGTAGATA 59.760 50.000 5.05 0.00 37.49 1.98
1627 1713 1.005569 TCGCCGGATGGATAGGTAGAT 59.994 52.381 5.05 0.00 37.49 1.98
1628 1714 0.402887 TCGCCGGATGGATAGGTAGA 59.597 55.000 5.05 0.00 37.49 2.59
1629 1715 1.254026 TTCGCCGGATGGATAGGTAG 58.746 55.000 5.05 0.00 37.49 3.18
1630 1716 1.548719 CATTCGCCGGATGGATAGGTA 59.451 52.381 5.05 0.00 37.49 3.08
1631 1717 0.321671 CATTCGCCGGATGGATAGGT 59.678 55.000 5.05 0.00 37.49 3.08
1632 1718 1.021390 GCATTCGCCGGATGGATAGG 61.021 60.000 5.05 0.00 37.49 2.57
1633 1719 1.354337 CGCATTCGCCGGATGGATAG 61.354 60.000 5.05 0.00 37.49 2.08
1684 1770 1.079405 GTTGGACTCGAATCCGCCA 60.079 57.895 8.62 0.00 42.24 5.69
1696 1787 1.971167 TCCGCAATGCAGGTTGGAC 60.971 57.895 5.91 0.00 0.00 4.02
1715 1815 3.717294 CCAACCCACCCCTCTCCG 61.717 72.222 0.00 0.00 0.00 4.63
1754 1854 6.836527 CCCAACAACCTACCATCCATAAATTA 59.163 38.462 0.00 0.00 0.00 1.40
1755 1855 5.660864 CCCAACAACCTACCATCCATAAATT 59.339 40.000 0.00 0.00 0.00 1.82
1762 1863 0.996583 TCCCCAACAACCTACCATCC 59.003 55.000 0.00 0.00 0.00 3.51
1821 1926 9.816787 ACATTCTTGTTCCTATAACCCTAAAAA 57.183 29.630 0.00 0.00 29.55 1.94
1822 1927 9.457436 GACATTCTTGTTCCTATAACCCTAAAA 57.543 33.333 0.00 0.00 35.79 1.52
1823 1928 7.767198 CGACATTCTTGTTCCTATAACCCTAAA 59.233 37.037 0.00 0.00 35.79 1.85
1824 1929 7.093201 ACGACATTCTTGTTCCTATAACCCTAA 60.093 37.037 0.00 0.00 35.79 2.69
1825 1930 6.381994 ACGACATTCTTGTTCCTATAACCCTA 59.618 38.462 0.00 0.00 35.79 3.53
1826 1931 5.189145 ACGACATTCTTGTTCCTATAACCCT 59.811 40.000 0.00 0.00 35.79 4.34
1827 1932 5.293569 CACGACATTCTTGTTCCTATAACCC 59.706 44.000 0.00 0.00 35.79 4.11
1828 1933 6.103997 TCACGACATTCTTGTTCCTATAACC 58.896 40.000 0.00 0.00 35.79 2.85
1829 1934 7.306051 CGATCACGACATTCTTGTTCCTATAAC 60.306 40.741 0.00 0.00 42.66 1.89
1830 1935 6.695713 CGATCACGACATTCTTGTTCCTATAA 59.304 38.462 0.00 0.00 42.66 0.98
1831 1936 6.183360 ACGATCACGACATTCTTGTTCCTATA 60.183 38.462 0.00 0.00 42.66 1.31
1832 1937 5.043903 CGATCACGACATTCTTGTTCCTAT 58.956 41.667 0.00 0.00 42.66 2.57
1833 1938 4.082408 ACGATCACGACATTCTTGTTCCTA 60.082 41.667 0.00 0.00 42.66 2.94
1834 1939 3.254060 CGATCACGACATTCTTGTTCCT 58.746 45.455 0.00 0.00 42.66 3.36
1835 1940 2.993899 ACGATCACGACATTCTTGTTCC 59.006 45.455 0.00 0.00 42.66 3.62
1836 1941 3.722082 GCACGATCACGACATTCTTGTTC 60.722 47.826 0.00 0.00 42.66 3.18
1837 1942 2.157668 GCACGATCACGACATTCTTGTT 59.842 45.455 0.00 0.00 42.66 2.83
1838 1943 1.726791 GCACGATCACGACATTCTTGT 59.273 47.619 0.00 0.00 42.66 3.16
1863 1971 5.745514 TCGTATAGCTAGCACTTTTCTACG 58.254 41.667 18.83 13.74 0.00 3.51
1884 1992 1.392710 ATACGCAACTCCCTCCCTCG 61.393 60.000 0.00 0.00 0.00 4.63
1885 1993 0.831307 AATACGCAACTCCCTCCCTC 59.169 55.000 0.00 0.00 0.00 4.30
1886 1994 2.040178 CTAATACGCAACTCCCTCCCT 58.960 52.381 0.00 0.00 0.00 4.20
1888 1996 1.138266 TGCTAATACGCAACTCCCTCC 59.862 52.381 0.00 0.00 36.89 4.30
1890 1998 1.473434 GCTGCTAATACGCAACTCCCT 60.473 52.381 0.00 0.00 39.80 4.20
1922 2034 8.713737 ACTACTTAAAATAAACGTCTCCATCC 57.286 34.615 0.00 0.00 0.00 3.51
1954 2066 3.345508 AATTCCGAACCAAGGGAGTAC 57.654 47.619 0.00 0.00 33.01 2.73
1957 2069 3.629142 AGTAATTCCGAACCAAGGGAG 57.371 47.619 0.00 0.00 33.01 4.30
1960 2072 5.219633 CACAAAAGTAATTCCGAACCAAGG 58.780 41.667 0.00 0.00 0.00 3.61
1961 2073 5.827666 ACACAAAAGTAATTCCGAACCAAG 58.172 37.500 0.00 0.00 0.00 3.61
1962 2074 5.838531 ACACAAAAGTAATTCCGAACCAA 57.161 34.783 0.00 0.00 0.00 3.67
1963 2075 5.821470 TGTACACAAAAGTAATTCCGAACCA 59.179 36.000 0.00 0.00 0.00 3.67
1964 2076 6.138088 GTGTACACAAAAGTAATTCCGAACC 58.862 40.000 21.14 0.00 0.00 3.62
1965 2077 6.630045 GTGTGTACACAAAAGTAATTCCGAAC 59.370 38.462 29.44 8.17 45.75 3.95
1966 2078 6.717413 GTGTGTACACAAAAGTAATTCCGAA 58.283 36.000 29.44 0.00 45.75 4.30
1967 2079 6.289745 GTGTGTACACAAAAGTAATTCCGA 57.710 37.500 29.44 0.00 45.75 4.55
1999 2111 9.672673 ATCACAAAGGTGCCTATATATTCATAC 57.327 33.333 0.00 0.00 44.87 2.39
2040 2152 7.873505 AGACTAGTCTAAATGAAAACCACAGAC 59.126 37.037 24.04 0.00 38.35 3.51
2052 2196 5.446143 AGATGGCGAGACTAGTCTAAATG 57.554 43.478 25.23 15.62 40.61 2.32
2143 2348 4.998672 CGACCTAACCAGTGTAATCCAAAA 59.001 41.667 0.00 0.00 0.00 2.44
2196 2408 4.270566 CACGGAGCTACTGTACTGTAGTAG 59.729 50.000 29.54 21.47 46.57 2.57
2199 2411 2.355132 CCACGGAGCTACTGTACTGTAG 59.645 54.545 26.95 26.95 41.91 2.74
2202 2414 0.179134 GCCACGGAGCTACTGTACTG 60.179 60.000 0.00 0.00 36.20 2.74
2203 2415 0.611062 TGCCACGGAGCTACTGTACT 60.611 55.000 0.00 0.00 36.20 2.73
2215 2427 3.672447 TTGCACATGCTGCCACGG 61.672 61.111 14.85 0.00 46.51 4.94
2294 2514 1.561542 CCCACTCTGCTTCACCCTAAT 59.438 52.381 0.00 0.00 0.00 1.73
2299 2519 2.527951 ATCGCCCACTCTGCTTCACC 62.528 60.000 0.00 0.00 0.00 4.02
2314 2534 0.947244 CCCAGCCAGACATAAATCGC 59.053 55.000 0.00 0.00 0.00 4.58
2330 2555 2.026915 CCACACTGAATGATCTGTCCCA 60.027 50.000 0.00 0.00 35.77 4.37
2339 2564 3.259876 GGTACCACTACCACACTGAATGA 59.740 47.826 7.15 0.00 42.16 2.57
2362 2971 3.181445 TGCCCTACACACAAGATGAAAGT 60.181 43.478 0.00 0.00 0.00 2.66
2373 2990 1.675641 CTGCCCTTGCCCTACACAC 60.676 63.158 0.00 0.00 36.33 3.82
2437 3055 1.946768 TCTTTTCCCAACGAGTGCTTG 59.053 47.619 0.00 0.00 0.00 4.01
2512 3137 8.902806 TCAAATCGCACTTTCTTGGATTATTAT 58.097 29.630 0.00 0.00 0.00 1.28
2516 3141 6.757897 ATCAAATCGCACTTTCTTGGATTA 57.242 33.333 0.00 0.00 0.00 1.75
2520 3145 3.922240 CCAATCAAATCGCACTTTCTTGG 59.078 43.478 0.00 0.00 0.00 3.61
2525 3199 3.441572 CCTCTCCAATCAAATCGCACTTT 59.558 43.478 0.00 0.00 0.00 2.66
2528 3202 1.064654 GCCTCTCCAATCAAATCGCAC 59.935 52.381 0.00 0.00 0.00 5.34
2531 3205 0.940126 CGGCCTCTCCAATCAAATCG 59.060 55.000 0.00 0.00 34.01 3.34
2573 3256 1.402787 ATAAAGATTTGGCAGCCGGG 58.597 50.000 7.03 0.00 0.00 5.73
2683 4399 6.153000 AGCCGATCGTACCAATCTATTCTAAT 59.847 38.462 15.09 0.00 0.00 1.73
2727 4476 4.148825 GCACCGTCCTCTGCCGAT 62.149 66.667 0.00 0.00 0.00 4.18
2789 4544 0.873054 CGTAGATGTCGCGAGGGTAT 59.127 55.000 10.24 1.30 0.00 2.73
2863 4619 0.110147 CGTGTCGAGACAGACTCACC 60.110 60.000 13.65 0.00 45.14 4.02
2872 4628 2.682952 TGAAAGAGACGTGTCGAGAC 57.317 50.000 7.10 1.88 34.09 3.36
2877 4633 4.506217 CGAAACTTTGAAAGAGACGTGTC 58.494 43.478 12.53 4.17 0.00 3.67
2880 4638 3.528532 ACCGAAACTTTGAAAGAGACGT 58.471 40.909 12.53 0.00 0.00 4.34
2892 4650 0.106918 TGGCTGGACAACCGAAACTT 60.107 50.000 0.00 0.00 39.42 2.66
2913 4671 1.816863 TTCCACTCTCGTCACTGGCC 61.817 60.000 0.00 0.00 0.00 5.36
2915 4673 2.611518 GATTTCCACTCTCGTCACTGG 58.388 52.381 0.00 0.00 0.00 4.00
2917 4675 1.202582 CGGATTTCCACTCTCGTCACT 59.797 52.381 0.00 0.00 35.14 3.41
2918 4676 1.067776 ACGGATTTCCACTCTCGTCAC 60.068 52.381 0.00 0.00 35.14 3.67
2919 4677 1.067846 CACGGATTTCCACTCTCGTCA 60.068 52.381 0.00 0.00 35.14 4.35
2920 4678 1.630148 CACGGATTTCCACTCTCGTC 58.370 55.000 0.00 0.00 35.14 4.20
2921 4679 0.389948 GCACGGATTTCCACTCTCGT 60.390 55.000 0.00 0.00 35.14 4.18
2922 4680 0.389817 TGCACGGATTTCCACTCTCG 60.390 55.000 0.00 0.00 35.14 4.04
2923 4681 1.667724 CATGCACGGATTTCCACTCTC 59.332 52.381 0.00 0.00 35.14 3.20
2950 4708 1.609072 CTCTCTTGTGTCACGGACAGA 59.391 52.381 6.94 3.79 43.57 3.41
2975 4733 1.255667 AAATTCAGCCAGCCAGCCAG 61.256 55.000 0.00 0.00 0.00 4.85
2976 4734 0.039472 TAAATTCAGCCAGCCAGCCA 59.961 50.000 0.00 0.00 0.00 4.75
2977 4735 1.406903 ATAAATTCAGCCAGCCAGCC 58.593 50.000 0.00 0.00 0.00 4.85
2986 4744 2.397549 GCATGGCCGAATAAATTCAGC 58.602 47.619 0.00 2.86 39.00 4.26
3034 4793 1.502231 CCATGCGCATGTACTACTCC 58.498 55.000 39.70 0.00 37.11 3.85
3035 4794 1.068588 TCCCATGCGCATGTACTACTC 59.931 52.381 39.70 0.00 37.11 2.59
3036 4795 1.119684 TCCCATGCGCATGTACTACT 58.880 50.000 39.70 9.94 37.11 2.57
3037 4796 1.800586 CATCCCATGCGCATGTACTAC 59.199 52.381 39.70 0.00 37.11 2.73
3038 4797 1.691434 TCATCCCATGCGCATGTACTA 59.309 47.619 39.70 25.51 37.11 1.82
3039 4798 0.469494 TCATCCCATGCGCATGTACT 59.531 50.000 39.70 24.67 37.11 2.73
3040 4799 1.265095 CTTCATCCCATGCGCATGTAC 59.735 52.381 39.70 0.00 37.11 2.90
3041 4800 1.596603 CTTCATCCCATGCGCATGTA 58.403 50.000 39.70 30.20 37.11 2.29
3048 4807 0.458669 CACTTGGCTTCATCCCATGC 59.541 55.000 0.00 0.00 32.40 4.06
3062 4821 1.134848 GCCCTCTGCTACTCTCACTTG 60.135 57.143 0.00 0.00 36.87 3.16
3097 4960 8.850156 ACTTTGTTTTGCTCATTTCTGTACTAT 58.150 29.630 0.00 0.00 0.00 2.12
3098 4961 8.220755 ACTTTGTTTTGCTCATTTCTGTACTA 57.779 30.769 0.00 0.00 0.00 1.82
3099 4962 7.067494 AGACTTTGTTTTGCTCATTTCTGTACT 59.933 33.333 0.00 0.00 0.00 2.73
3100 4963 7.196331 AGACTTTGTTTTGCTCATTTCTGTAC 58.804 34.615 0.00 0.00 0.00 2.90
3134 7713 5.975344 GGCGCTAAACTTTGTTTAGTTTTCT 59.025 36.000 22.87 0.00 43.85 2.52
3135 7714 5.975344 AGGCGCTAAACTTTGTTTAGTTTTC 59.025 36.000 22.87 14.18 43.85 2.29
3139 7718 4.386711 AGAGGCGCTAAACTTTGTTTAGT 58.613 39.130 22.87 9.94 35.14 2.24
3140 7719 6.663944 ATAGAGGCGCTAAACTTTGTTTAG 57.336 37.500 19.83 19.83 35.63 1.85
3142 7721 5.106277 GGAATAGAGGCGCTAAACTTTGTTT 60.106 40.000 7.64 1.33 31.66 2.83
3144 7723 3.939592 GGAATAGAGGCGCTAAACTTTGT 59.060 43.478 7.64 0.00 31.66 2.83
3145 7724 3.312697 GGGAATAGAGGCGCTAAACTTTG 59.687 47.826 7.64 0.00 31.66 2.77
3146 7725 3.200165 AGGGAATAGAGGCGCTAAACTTT 59.800 43.478 7.64 0.00 31.66 2.66
3147 7726 2.772515 AGGGAATAGAGGCGCTAAACTT 59.227 45.455 7.64 0.00 31.66 2.66
3148 7727 2.365941 GAGGGAATAGAGGCGCTAAACT 59.634 50.000 7.64 4.41 31.66 2.66
3149 7728 2.102588 TGAGGGAATAGAGGCGCTAAAC 59.897 50.000 7.64 0.00 31.66 2.01
3150 7729 2.394632 TGAGGGAATAGAGGCGCTAAA 58.605 47.619 7.64 0.00 31.66 1.85
3151 7730 2.082140 TGAGGGAATAGAGGCGCTAA 57.918 50.000 7.64 0.00 31.66 3.09
3152 7731 2.082140 TTGAGGGAATAGAGGCGCTA 57.918 50.000 7.64 0.00 0.00 4.26
3153 7732 1.428869 ATTGAGGGAATAGAGGCGCT 58.571 50.000 7.64 0.00 0.00 5.92
3154 7733 2.262423 AATTGAGGGAATAGAGGCGC 57.738 50.000 0.00 0.00 0.00 6.53
3155 7734 3.808728 TGAAATTGAGGGAATAGAGGCG 58.191 45.455 0.00 0.00 0.00 5.52
3156 7735 5.041191 TCTGAAATTGAGGGAATAGAGGC 57.959 43.478 0.00 0.00 0.00 4.70
3157 7736 6.060788 CCTTCTGAAATTGAGGGAATAGAGG 58.939 44.000 0.00 0.00 33.15 3.69
3158 7737 6.060788 CCCTTCTGAAATTGAGGGAATAGAG 58.939 44.000 5.59 0.00 38.82 2.43
3159 7738 5.731187 TCCCTTCTGAAATTGAGGGAATAGA 59.269 40.000 10.90 0.00 42.06 1.98
3160 7739 6.006275 TCCCTTCTGAAATTGAGGGAATAG 57.994 41.667 10.90 0.00 42.06 1.73
3162 7741 4.953781 TCCCTTCTGAAATTGAGGGAAT 57.046 40.909 10.90 0.00 42.06 3.01
3165 7744 3.053395 TGGATCCCTTCTGAAATTGAGGG 60.053 47.826 9.90 5.20 37.91 4.30
3166 7745 4.080129 TCTGGATCCCTTCTGAAATTGAGG 60.080 45.833 9.90 0.00 0.00 3.86
3167 7746 5.108187 TCTGGATCCCTTCTGAAATTGAG 57.892 43.478 9.90 0.00 0.00 3.02
3168 7747 4.627255 GCTCTGGATCCCTTCTGAAATTGA 60.627 45.833 9.90 0.00 0.00 2.57
3169 7748 3.631227 GCTCTGGATCCCTTCTGAAATTG 59.369 47.826 9.90 0.00 0.00 2.32
3170 7749 3.267812 TGCTCTGGATCCCTTCTGAAATT 59.732 43.478 9.90 0.00 0.00 1.82
3171 7750 2.848694 TGCTCTGGATCCCTTCTGAAAT 59.151 45.455 9.90 0.00 0.00 2.17
3235 7815 8.997323 AGACAAGAGAACATTTTATTGAGTGAG 58.003 33.333 0.00 0.00 0.00 3.51
3317 7899 5.181009 TCAGTTCAAGTGAGGATAGCAATG 58.819 41.667 0.00 0.00 0.00 2.82
3357 7941 4.660789 AGCTCATGTTGTGCTTCTTTTT 57.339 36.364 0.00 0.00 43.76 1.94
3358 7942 4.022849 GGTAGCTCATGTTGTGCTTCTTTT 60.023 41.667 9.08 0.00 43.76 2.27
3359 7943 3.503748 GGTAGCTCATGTTGTGCTTCTTT 59.496 43.478 9.08 0.00 43.76 2.52
3360 7944 3.077359 GGTAGCTCATGTTGTGCTTCTT 58.923 45.455 9.08 0.00 43.76 2.52
3361 7945 2.616510 GGGTAGCTCATGTTGTGCTTCT 60.617 50.000 9.08 0.00 43.76 2.85
3362 7946 1.740025 GGGTAGCTCATGTTGTGCTTC 59.260 52.381 9.08 4.86 43.76 3.86
3363 7947 1.352352 AGGGTAGCTCATGTTGTGCTT 59.648 47.619 9.08 0.00 43.76 3.91
3389 7973 5.359576 AGGTGCAACAGTATTGTCAGAAAAA 59.640 36.000 3.64 0.00 39.98 1.94
3490 8074 0.824759 GGCACGTCCTGGAAGTAGAT 59.175 55.000 14.91 0.00 0.00 1.98
3678 8262 1.208358 CTGGTAGACGTCGTGCGAA 59.792 57.895 10.46 0.00 44.77 4.70
3681 8265 2.181021 CCCTGGTAGACGTCGTGC 59.819 66.667 10.46 4.24 0.00 5.34
3948 8532 6.362283 AGTTTGCACATAATAACAAAGAACGC 59.638 34.615 0.00 0.00 33.02 4.84
3968 8555 5.801350 TGCACTAGCTAGCATTTAGTTTG 57.199 39.130 20.91 9.02 42.74 2.93
4015 8602 6.530181 ACCGAAACAAAAATTGTCAGAAAGAC 59.470 34.615 0.00 0.00 44.59 3.01
4019 8606 6.868864 TGAAACCGAAACAAAAATTGTCAGAA 59.131 30.769 0.00 0.00 44.59 3.02
4025 8612 7.582319 GCATAACTGAAACCGAAACAAAAATTG 59.418 33.333 0.00 0.00 0.00 2.32
4068 8655 2.741486 ATTGTGACGTCGGGGTTGGG 62.741 60.000 11.62 0.00 0.00 4.12
4083 8670 3.557595 GGATCGAAGAATGCTCGAATTGT 59.442 43.478 0.00 0.00 43.58 2.71
4243 8834 0.036765 GGTGGCACCAAGTCGTATGA 60.037 55.000 31.26 0.00 38.42 2.15
4259 8850 1.364901 CAAAGCAAGCCAGGTGGTG 59.635 57.895 0.00 0.00 37.57 4.17
4260 8851 0.184933 TACAAAGCAAGCCAGGTGGT 59.815 50.000 0.00 0.00 37.57 4.16
4287 8878 4.261489 CCATGGATAAGCAAGCAACTCATC 60.261 45.833 5.56 0.00 0.00 2.92
4546 9138 2.614969 AGGCCCATCCTCTTGGCA 60.615 61.111 0.00 0.00 43.20 4.92
4654 9720 2.165301 GTATGCGTCGGTCTGTGCC 61.165 63.158 0.00 0.00 0.00 5.01
4658 9724 1.066454 TGGTATGTATGCGTCGGTCTG 59.934 52.381 0.00 0.00 0.00 3.51
4662 9728 3.291809 TGTATGGTATGTATGCGTCGG 57.708 47.619 0.00 0.00 0.00 4.79
4663 9729 5.034797 CCTATGTATGGTATGTATGCGTCG 58.965 45.833 0.00 0.00 0.00 5.12
4664 9730 6.203808 TCCTATGTATGGTATGTATGCGTC 57.796 41.667 0.00 0.00 0.00 5.19
4667 9733 8.478066 TCTTCATCCTATGTATGGTATGTATGC 58.522 37.037 0.00 0.00 0.00 3.14
4671 9737 9.104713 TCAATCTTCATCCTATGTATGGTATGT 57.895 33.333 0.00 0.00 0.00 2.29
4674 9740 9.104713 ACATCAATCTTCATCCTATGTATGGTA 57.895 33.333 0.00 0.00 0.00 3.25
4675 9741 7.982252 ACATCAATCTTCATCCTATGTATGGT 58.018 34.615 0.00 0.00 0.00 3.55
4676 9742 8.727910 CAACATCAATCTTCATCCTATGTATGG 58.272 37.037 0.00 0.00 0.00 2.74
4773 9967 1.927210 CACGAGCACACCATATCGC 59.073 57.895 0.00 0.00 38.71 4.58
4797 10008 5.692204 CCTACATCACTTCCATTCGATGTAC 59.308 44.000 6.93 0.00 44.97 2.90
4803 10014 4.060900 CCATCCTACATCACTTCCATTCG 58.939 47.826 0.00 0.00 0.00 3.34
4832 11090 7.596248 GCACATACATGGATACCAAATTCATTC 59.404 37.037 0.00 0.00 36.95 2.67
4834 11092 6.550481 TGCACATACATGGATACCAAATTCAT 59.450 34.615 0.00 0.00 36.95 2.57
4835 11093 5.890419 TGCACATACATGGATACCAAATTCA 59.110 36.000 0.00 0.00 36.95 2.57
4840 11098 3.569277 GCATGCACATACATGGATACCAA 59.431 43.478 14.21 0.00 46.14 3.67
4841 11099 3.148412 GCATGCACATACATGGATACCA 58.852 45.455 14.21 0.00 46.14 3.25
4842 11100 2.489329 GGCATGCACATACATGGATACC 59.511 50.000 21.36 0.00 46.14 2.73
4843 11101 2.160219 CGGCATGCACATACATGGATAC 59.840 50.000 21.36 0.00 46.14 2.24
4844 11102 2.425539 CGGCATGCACATACATGGATA 58.574 47.619 21.36 0.00 46.14 2.59
4845 11103 1.241165 CGGCATGCACATACATGGAT 58.759 50.000 21.36 0.00 46.14 3.41
4849 11107 2.195567 GGCCGGCATGCACATACAT 61.196 57.895 30.85 0.00 0.00 2.29
4885 11143 2.611722 GGACTTCCTTGTGCAGTCTCTC 60.612 54.545 0.00 0.00 37.64 3.20
4887 11145 1.070758 TGGACTTCCTTGTGCAGTCTC 59.929 52.381 0.00 0.00 37.64 3.36
4909 12154 2.283101 TGGTTGCTGCATGGGTCC 60.283 61.111 1.84 2.54 0.00 4.46
4912 12157 1.895020 ATTGCTGGTTGCTGCATGGG 61.895 55.000 1.84 0.00 43.37 4.00
4915 12160 0.530744 CAGATTGCTGGTTGCTGCAT 59.469 50.000 1.84 0.00 43.37 3.96
4930 12175 6.986231 TGACGATTCATAAACAGCATACAGAT 59.014 34.615 0.00 0.00 0.00 2.90
4931 12176 6.337356 TGACGATTCATAAACAGCATACAGA 58.663 36.000 0.00 0.00 0.00 3.41
4935 12180 7.518848 GCTTGATGACGATTCATAAACAGCATA 60.519 37.037 0.00 0.00 42.95 3.14
4976 12222 0.108329 ACGGTGATGGTCGGATGAAC 60.108 55.000 0.00 0.00 0.00 3.18
4977 12223 0.108377 CACGGTGATGGTCGGATGAA 60.108 55.000 0.74 0.00 0.00 2.57
4978 12224 1.515487 CACGGTGATGGTCGGATGA 59.485 57.895 0.74 0.00 0.00 2.92
4979 12225 1.521457 CCACGGTGATGGTCGGATG 60.521 63.158 10.28 0.00 34.77 3.51
4980 12226 1.676678 CTCCACGGTGATGGTCGGAT 61.677 60.000 10.28 0.00 40.95 4.18
4981 12227 2.283316 TCCACGGTGATGGTCGGA 60.283 61.111 10.28 0.00 40.95 4.55
4983 12232 1.153823 GACTCCACGGTGATGGTCG 60.154 63.158 10.28 0.00 40.95 4.79
5015 12269 5.018809 AGTTAGGTTTATAGTCACGACCCA 58.981 41.667 0.00 0.00 0.00 4.51
5017 12271 6.183360 TGCTAGTTAGGTTTATAGTCACGACC 60.183 42.308 0.00 0.00 0.00 4.79
5018 12272 6.789262 TGCTAGTTAGGTTTATAGTCACGAC 58.211 40.000 0.00 0.00 0.00 4.34
5020 12274 7.972277 TCTTTGCTAGTTAGGTTTATAGTCACG 59.028 37.037 0.00 0.00 0.00 4.35
5060 12314 3.349927 TGACCTTTCATGGCTTGAGATG 58.650 45.455 3.16 0.00 35.27 2.90
5065 12319 2.089980 CTCCTGACCTTTCATGGCTTG 58.910 52.381 0.00 0.00 0.00 4.01
5099 12359 3.181458 GGTGCCAACCGAGATAGGAATAA 60.181 47.826 0.00 0.00 36.51 1.40
5171 12455 0.320374 TAGGCACGAGGTGTTTCCAG 59.680 55.000 0.00 0.00 39.02 3.86
5376 12790 6.944234 AGGGAAAAGAGTAGAAAGTTGTTG 57.056 37.500 0.00 0.00 0.00 3.33
5391 12805 8.925700 GCACTTGTGAATTAATAAAGGGAAAAG 58.074 33.333 4.79 0.00 0.00 2.27
5449 12863 2.724690 CACCTAGTCAACGTTGAAGTCG 59.275 50.000 31.20 20.44 39.21 4.18
5456 12870 5.476614 GACTTATTCCACCTAGTCAACGTT 58.523 41.667 0.00 0.00 37.53 3.99
5480 12894 7.218204 GTGTATATCATGGTTTGCGTTCTTTTC 59.782 37.037 0.00 0.00 0.00 2.29
5481 12895 7.027161 GTGTATATCATGGTTTGCGTTCTTTT 58.973 34.615 0.00 0.00 0.00 2.27
5485 12899 4.334203 TGGTGTATATCATGGTTTGCGTTC 59.666 41.667 0.00 0.00 0.00 3.95
5585 12999 2.922335 GCAATTTTCTTGGGTGAGTCGC 60.922 50.000 0.00 0.00 0.00 5.19
5586 13000 2.293122 TGCAATTTTCTTGGGTGAGTCG 59.707 45.455 0.00 0.00 0.00 4.18
5595 13009 6.411492 CGGATTTTTGTTGTGCAATTTTCTTG 59.589 34.615 0.00 0.00 36.89 3.02
5612 13026 7.222161 AGTTAGTCCAGTTTAGACGGATTTTT 58.778 34.615 1.50 0.00 39.31 1.94



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.