Multiple sequence alignment - TraesCS3A01G489900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G489900 chr3A 100.000 3026 0 0 1 3026 717493902 717490877 0.000000e+00 5589.0
1 TraesCS3A01G489900 chr3A 96.505 515 18 0 1 515 717500368 717499854 0.000000e+00 852.0
2 TraesCS3A01G489900 chr3A 93.981 515 30 1 1 515 394468581 394469094 0.000000e+00 778.0
3 TraesCS3A01G489900 chr3A 93.786 515 30 2 1 515 177498178 177498690 0.000000e+00 773.0
4 TraesCS3A01G489900 chr3A 92.188 128 8 2 2298 2424 13008951 13008825 2.400000e-41 180.0
5 TraesCS3A01G489900 chr3D 94.540 1337 53 1 984 2300 587906099 587904763 0.000000e+00 2047.0
6 TraesCS3A01G489900 chr3D 85.714 462 56 3 1780 2232 587874283 587873823 2.110000e-131 479.0
7 TraesCS3A01G489900 chr3D 91.483 317 24 3 2713 3026 587904763 587904447 1.670000e-117 433.0
8 TraesCS3A01G489900 chr3D 88.889 189 20 1 516 703 587906880 587906692 6.520000e-57 231.0
9 TraesCS3A01G489900 chr3D 89.091 165 4 4 686 841 587906678 587906519 3.080000e-45 193.0
10 TraesCS3A01G489900 chr3B 93.885 556 34 0 1386 1941 785308319 785307764 0.000000e+00 839.0
11 TraesCS3A01G489900 chr3B 98.721 391 4 1 2422 2811 785307394 785307004 0.000000e+00 693.0
12 TraesCS3A01G489900 chr3B 96.386 332 11 1 1929 2259 785307746 785307415 2.050000e-151 545.0
13 TraesCS3A01G489900 chr3B 83.470 611 59 22 1423 2028 783414036 783414609 5.740000e-147 531.0
14 TraesCS3A01G489900 chr3B 91.237 388 27 4 873 1260 785311979 785311599 3.460000e-144 521.0
15 TraesCS3A01G489900 chr3B 87.168 452 51 3 1785 2232 785303982 785303534 9.680000e-140 507.0
16 TraesCS3A01G489900 chr3B 95.299 234 9 2 2794 3026 785306748 785306516 1.330000e-98 370.0
17 TraesCS3A01G489900 chr3B 82.872 397 36 17 1000 1364 783413488 783413884 8.090000e-86 327.0
18 TraesCS3A01G489900 chr3B 91.463 164 14 0 518 681 785312340 785312177 3.040000e-55 226.0
19 TraesCS3A01G489900 chr3B 88.554 166 5 5 686 841 785312132 785311971 3.980000e-44 189.0
20 TraesCS3A01G489900 chr3B 89.510 143 12 3 2289 2430 500302758 500302618 8.620000e-41 178.0
21 TraesCS3A01G489900 chr3B 91.473 129 9 2 2298 2425 654259513 654259386 3.100000e-40 176.0
22 TraesCS3A01G489900 chr3B 100.000 52 0 0 1287 1338 785311602 785311551 2.480000e-16 97.1
23 TraesCS3A01G489900 chr2A 94.197 517 29 1 1 517 421076196 421076711 0.000000e+00 787.0
24 TraesCS3A01G489900 chr2A 93.786 515 31 1 1 515 421069732 421070245 0.000000e+00 773.0
25 TraesCS3A01G489900 chr7A 94.186 516 29 1 1 516 242840561 242841075 0.000000e+00 785.0
26 TraesCS3A01G489900 chr7A 91.406 128 11 0 2298 2425 426753985 426754112 3.100000e-40 176.0
27 TraesCS3A01G489900 chr6A 93.981 515 29 2 1 515 405742853 405743365 0.000000e+00 778.0
28 TraesCS3A01G489900 chr4A 93.774 514 29 3 1 513 631481128 631481639 0.000000e+00 769.0
29 TraesCS3A01G489900 chr4A 92.188 128 10 0 2298 2425 662882050 662881923 6.660000e-42 182.0
30 TraesCS3A01G489900 chr5A 93.592 515 32 1 1 515 441017699 441018212 0.000000e+00 767.0
31 TraesCS3A01G489900 chr5A 92.126 127 9 1 2298 2424 689197241 689197116 8.620000e-41 178.0
32 TraesCS3A01G489900 chr7B 91.791 134 8 3 2293 2425 646052796 646052665 1.850000e-42 183.0
33 TraesCS3A01G489900 chr5B 92.188 128 10 0 2298 2425 698260586 698260713 6.660000e-42 182.0
34 TraesCS3A01G489900 chr2B 91.045 134 10 2 2298 2430 551567995 551567863 2.400000e-41 180.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G489900 chr3A 717490877 717493902 3025 True 5589.000000 5589 100.000000 1 3026 1 chr3A.!!$R2 3025
1 TraesCS3A01G489900 chr3A 717499854 717500368 514 True 852.000000 852 96.505000 1 515 1 chr3A.!!$R3 514
2 TraesCS3A01G489900 chr3A 394468581 394469094 513 False 778.000000 778 93.981000 1 515 1 chr3A.!!$F2 514
3 TraesCS3A01G489900 chr3A 177498178 177498690 512 False 773.000000 773 93.786000 1 515 1 chr3A.!!$F1 514
4 TraesCS3A01G489900 chr3D 587904447 587906880 2433 True 726.000000 2047 91.000750 516 3026 4 chr3D.!!$R2 2510
5 TraesCS3A01G489900 chr3B 785303534 785312340 8806 True 443.011111 839 93.634778 518 3026 9 chr3B.!!$R3 2508
6 TraesCS3A01G489900 chr3B 783413488 783414609 1121 False 429.000000 531 83.171000 1000 2028 2 chr3B.!!$F1 1028
7 TraesCS3A01G489900 chr2A 421076196 421076711 515 False 787.000000 787 94.197000 1 517 1 chr2A.!!$F2 516
8 TraesCS3A01G489900 chr2A 421069732 421070245 513 False 773.000000 773 93.786000 1 515 1 chr2A.!!$F1 514
9 TraesCS3A01G489900 chr7A 242840561 242841075 514 False 785.000000 785 94.186000 1 516 1 chr7A.!!$F1 515
10 TraesCS3A01G489900 chr6A 405742853 405743365 512 False 778.000000 778 93.981000 1 515 1 chr6A.!!$F1 514
11 TraesCS3A01G489900 chr4A 631481128 631481639 511 False 769.000000 769 93.774000 1 513 1 chr4A.!!$F1 512
12 TraesCS3A01G489900 chr5A 441017699 441018212 513 False 767.000000 767 93.592000 1 515 1 chr5A.!!$F1 514

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
719 763 0.305922 GCGCGATTTCTTCCCTGATG 59.694 55.0 12.1 0.0 0.0 3.07 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2511 6488 0.03759 TGGCCGGCTTTCTGTAACAT 59.962 50.0 28.56 0.0 0.0 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 4.102996 ACAAAAGTTGGGCCAGATTCAAAT 59.897 37.500 6.23 0.00 34.12 2.32
88 89 3.432378 AGGACTCTAGGACGTGAATTGT 58.568 45.455 0.00 0.00 0.00 2.71
96 98 7.660208 ACTCTAGGACGTGAATTGTTGTAATTT 59.340 33.333 0.00 0.00 0.00 1.82
148 151 2.489971 CTTGTACGAAAAGTCCAGCCA 58.510 47.619 0.00 0.00 0.00 4.75
213 216 8.786898 CACCAATCGAACCAATCAATCTATTAT 58.213 33.333 0.00 0.00 0.00 1.28
248 251 6.503944 TCATCTATCTTTATCCCCTACCCTC 58.496 44.000 0.00 0.00 0.00 4.30
571 575 0.898789 GTGAGGAGGTCGAGGTGGAA 60.899 60.000 0.00 0.00 0.00 3.53
575 579 0.688087 GGAGGTCGAGGTGGAAGGAT 60.688 60.000 0.00 0.00 0.00 3.24
576 580 0.461961 GAGGTCGAGGTGGAAGGATG 59.538 60.000 0.00 0.00 0.00 3.51
585 589 1.034292 GTGGAAGGATGGGAAGCAGC 61.034 60.000 0.00 0.00 0.00 5.25
590 594 4.838152 GATGGGAAGCAGCGCGGA 62.838 66.667 13.03 0.00 0.00 5.54
669 673 2.050350 CGGAGGCGGAGTACTGGAA 61.050 63.158 0.00 0.00 0.00 3.53
719 763 0.305922 GCGCGATTTCTTCCCTGATG 59.694 55.000 12.10 0.00 0.00 3.07
720 764 0.940126 CGCGATTTCTTCCCTGATGG 59.060 55.000 0.00 0.00 0.00 3.51
721 765 1.743772 CGCGATTTCTTCCCTGATGGT 60.744 52.381 0.00 0.00 34.77 3.55
722 766 1.672881 GCGATTTCTTCCCTGATGGTG 59.327 52.381 0.00 0.00 34.77 4.17
723 767 2.292267 CGATTTCTTCCCTGATGGTGG 58.708 52.381 0.00 0.00 34.77 4.61
743 788 0.460459 GGAACCTAGCAACGAGAGGC 60.460 60.000 0.00 0.00 33.28 4.70
747 801 1.377366 CCTAGCAACGAGAGGCGAGA 61.377 60.000 0.00 0.00 44.57 4.04
753 807 0.656785 AACGAGAGGCGAGACGTATC 59.343 55.000 0.00 0.00 44.57 2.24
806 860 4.483243 GGATCGCGGGAGGGCAAA 62.483 66.667 6.13 0.00 43.32 3.68
807 861 2.437716 GATCGCGGGAGGGCAAAA 60.438 61.111 6.13 0.00 43.32 2.44
841 895 0.895100 GGCCAGCAGATTGTGGTTGA 60.895 55.000 0.00 0.00 36.10 3.18
842 896 0.961019 GCCAGCAGATTGTGGTTGAA 59.039 50.000 0.00 0.00 36.10 2.69
843 897 1.340889 GCCAGCAGATTGTGGTTGAAA 59.659 47.619 0.00 0.00 36.10 2.69
844 898 2.028748 GCCAGCAGATTGTGGTTGAAAT 60.029 45.455 0.00 0.00 36.10 2.17
845 899 3.555586 GCCAGCAGATTGTGGTTGAAATT 60.556 43.478 0.00 0.00 36.10 1.82
846 900 4.240096 CCAGCAGATTGTGGTTGAAATTC 58.760 43.478 0.00 0.00 33.38 2.17
847 901 4.021719 CCAGCAGATTGTGGTTGAAATTCT 60.022 41.667 0.00 0.00 33.38 2.40
848 902 5.159209 CAGCAGATTGTGGTTGAAATTCTC 58.841 41.667 0.00 0.00 33.38 2.87
849 903 4.828939 AGCAGATTGTGGTTGAAATTCTCA 59.171 37.500 0.00 0.00 30.62 3.27
850 904 5.302568 AGCAGATTGTGGTTGAAATTCTCAA 59.697 36.000 0.00 0.68 41.93 3.02
851 905 5.984926 GCAGATTGTGGTTGAAATTCTCAAA 59.015 36.000 0.00 0.00 45.67 2.69
852 906 6.479660 GCAGATTGTGGTTGAAATTCTCAAAA 59.520 34.615 0.00 0.00 45.67 2.44
853 907 7.011295 GCAGATTGTGGTTGAAATTCTCAAAAA 59.989 33.333 0.00 1.10 45.67 1.94
917 971 0.976641 TCTCTGCATCAAACGGTCCT 59.023 50.000 0.00 0.00 0.00 3.85
918 972 1.081892 CTCTGCATCAAACGGTCCTG 58.918 55.000 0.00 0.00 0.00 3.86
919 973 0.396435 TCTGCATCAAACGGTCCTGT 59.604 50.000 0.00 0.00 0.00 4.00
920 974 1.621317 TCTGCATCAAACGGTCCTGTA 59.379 47.619 0.00 0.00 0.00 2.74
921 975 2.002586 CTGCATCAAACGGTCCTGTAG 58.997 52.381 0.00 0.00 0.00 2.74
922 976 0.727398 GCATCAAACGGTCCTGTAGC 59.273 55.000 0.00 0.00 0.00 3.58
928 982 4.208686 CGGTCCTGTAGCCGCCTC 62.209 72.222 0.00 0.00 41.53 4.70
929 983 4.208686 GGTCCTGTAGCCGCCTCG 62.209 72.222 0.00 0.00 0.00 4.63
930 984 4.874977 GTCCTGTAGCCGCCTCGC 62.875 72.222 0.00 0.00 0.00 5.03
958 1264 1.293498 CCCTGAACACCACGAGAGG 59.707 63.158 0.00 0.00 0.00 3.69
961 1267 0.673985 CTGAACACCACGAGAGGTCA 59.326 55.000 0.00 0.00 40.77 4.02
1061 1444 2.044650 TCCGTTCCCGATCGGTCT 60.045 61.111 31.22 0.00 45.88 3.85
1119 1520 2.039613 GGAGATCTGATTGGATGGTCCC 59.960 54.545 0.00 0.00 35.03 4.46
1156 1557 0.613260 TCGGTAAGACATGCCTGCTT 59.387 50.000 0.00 4.66 0.00 3.91
1231 1632 1.412710 GAGTGCGGGGACAAGATGATA 59.587 52.381 0.00 0.00 0.00 2.15
1284 1685 2.005370 TGGGACACGGTACTCTTTCT 57.995 50.000 0.00 0.00 0.00 2.52
1383 4929 5.791336 ATTGGATGCGACATCTCTACTAA 57.209 39.130 15.98 6.36 0.00 2.24
1434 5090 5.583061 ACAAGTTTGTCACGTTCAGTTATCA 59.417 36.000 0.00 0.00 36.50 2.15
1445 5101 7.118680 TCACGTTCAGTTATCAGGGAAAATAAC 59.881 37.037 0.00 0.00 38.20 1.89
1457 5113 3.118775 GGGAAAATAACCCATCTTGTGCC 60.119 47.826 0.00 0.00 46.05 5.01
1474 5130 4.320023 TGTGCCGTCTGTGTTAACATTAT 58.680 39.130 12.26 0.00 35.22 1.28
1486 5142 4.131596 GTTAACATTATAGCCAGGCCGAA 58.868 43.478 8.22 0.00 0.00 4.30
1574 5230 2.058595 CCAGGTACCTCCCACTCCG 61.059 68.421 12.84 0.00 36.75 4.63
1637 5293 5.358160 GCTGCCTGAACTTTAATTATCCTGT 59.642 40.000 0.00 0.00 0.00 4.00
1894 5550 6.945435 TGGAGGTAATGCTTGTTTGATTCTTA 59.055 34.615 0.00 0.00 0.00 2.10
1905 5561 7.065085 GCTTGTTTGATTCTTAGTGCATCTCTA 59.935 37.037 0.00 0.00 0.00 2.43
1938 5624 4.448732 GGCCTTTGTGTTGTTGATCATTTC 59.551 41.667 0.00 0.00 0.00 2.17
2105 5794 5.839606 AGTTCTACCACCTAAGTTTCTCTGT 59.160 40.000 0.00 0.00 0.00 3.41
2119 5808 5.469421 AGTTTCTCTGTGATGAAGCAGAAAG 59.531 40.000 0.00 0.00 40.68 2.62
2244 5933 7.619302 ACAAAATATGGATGGGAGTGTTATGTT 59.381 33.333 0.00 0.00 0.00 2.71
2300 6277 4.160329 TCCAGTCCAGTTTCTGATGTACT 58.840 43.478 0.00 0.00 32.44 2.73
2301 6278 4.220821 TCCAGTCCAGTTTCTGATGTACTC 59.779 45.833 0.00 0.00 32.44 2.59
2302 6279 4.499183 CAGTCCAGTTTCTGATGTACTCC 58.501 47.826 0.00 0.00 32.44 3.85
2303 6280 3.515901 AGTCCAGTTTCTGATGTACTCCC 59.484 47.826 0.00 0.00 32.44 4.30
2304 6281 3.515901 GTCCAGTTTCTGATGTACTCCCT 59.484 47.826 0.00 0.00 32.44 4.20
2305 6282 3.769844 TCCAGTTTCTGATGTACTCCCTC 59.230 47.826 0.00 0.00 32.44 4.30
2306 6283 3.772025 CCAGTTTCTGATGTACTCCCTCT 59.228 47.826 0.00 0.00 32.44 3.69
2307 6284 4.382470 CCAGTTTCTGATGTACTCCCTCTG 60.382 50.000 0.00 0.00 32.44 3.35
2308 6285 4.221703 CAGTTTCTGATGTACTCCCTCTGT 59.778 45.833 0.00 0.00 32.44 3.41
2309 6286 4.464597 AGTTTCTGATGTACTCCCTCTGTC 59.535 45.833 0.00 0.00 0.00 3.51
2310 6287 4.323569 TTCTGATGTACTCCCTCTGTCT 57.676 45.455 0.00 0.00 0.00 3.41
2311 6288 3.625853 TCTGATGTACTCCCTCTGTCTG 58.374 50.000 0.00 0.00 0.00 3.51
2312 6289 3.267031 TCTGATGTACTCCCTCTGTCTGA 59.733 47.826 0.00 0.00 0.00 3.27
2313 6290 4.019858 CTGATGTACTCCCTCTGTCTGAA 58.980 47.826 0.00 0.00 0.00 3.02
2314 6291 4.416516 TGATGTACTCCCTCTGTCTGAAA 58.583 43.478 0.00 0.00 0.00 2.69
2315 6292 4.838423 TGATGTACTCCCTCTGTCTGAAAA 59.162 41.667 0.00 0.00 0.00 2.29
2316 6293 5.485353 TGATGTACTCCCTCTGTCTGAAAAT 59.515 40.000 0.00 0.00 0.00 1.82
2317 6294 6.667848 TGATGTACTCCCTCTGTCTGAAAATA 59.332 38.462 0.00 0.00 0.00 1.40
2318 6295 6.282199 TGTACTCCCTCTGTCTGAAAATAC 57.718 41.667 0.00 0.00 0.00 1.89
2319 6296 6.017192 TGTACTCCCTCTGTCTGAAAATACT 58.983 40.000 0.00 0.00 0.00 2.12
2320 6297 6.497259 TGTACTCCCTCTGTCTGAAAATACTT 59.503 38.462 0.00 0.00 0.00 2.24
2321 6298 5.799213 ACTCCCTCTGTCTGAAAATACTTG 58.201 41.667 0.00 0.00 0.00 3.16
2322 6299 5.308237 ACTCCCTCTGTCTGAAAATACTTGT 59.692 40.000 0.00 0.00 0.00 3.16
2323 6300 5.794894 TCCCTCTGTCTGAAAATACTTGTC 58.205 41.667 0.00 0.00 0.00 3.18
2324 6301 5.306937 TCCCTCTGTCTGAAAATACTTGTCA 59.693 40.000 0.00 0.00 0.00 3.58
2325 6302 6.013379 TCCCTCTGTCTGAAAATACTTGTCAT 60.013 38.462 0.00 0.00 0.00 3.06
2326 6303 6.314896 CCCTCTGTCTGAAAATACTTGTCATC 59.685 42.308 0.00 0.00 0.00 2.92
2327 6304 6.875726 CCTCTGTCTGAAAATACTTGTCATCA 59.124 38.462 0.00 0.00 0.00 3.07
2328 6305 7.388776 CCTCTGTCTGAAAATACTTGTCATCAA 59.611 37.037 0.00 0.00 0.00 2.57
2329 6306 8.675705 TCTGTCTGAAAATACTTGTCATCAAA 57.324 30.769 0.00 0.00 32.87 2.69
2330 6307 9.119418 TCTGTCTGAAAATACTTGTCATCAAAA 57.881 29.630 0.00 0.00 32.87 2.44
2331 6308 9.903682 CTGTCTGAAAATACTTGTCATCAAAAT 57.096 29.630 0.00 0.00 32.87 1.82
2332 6309 9.681692 TGTCTGAAAATACTTGTCATCAAAATG 57.318 29.630 0.00 0.00 32.87 2.32
2333 6310 9.897744 GTCTGAAAATACTTGTCATCAAAATGA 57.102 29.630 0.00 0.00 39.63 2.57
2365 6342 9.461312 AAAGGATGTATGTAGAACTAAAATGCA 57.539 29.630 0.00 0.00 0.00 3.96
2366 6343 9.632638 AAGGATGTATGTAGAACTAAAATGCAT 57.367 29.630 0.00 0.00 0.00 3.96
2367 6344 9.277783 AGGATGTATGTAGAACTAAAATGCATC 57.722 33.333 17.78 17.78 0.00 3.91
2368 6345 9.277783 GGATGTATGTAGAACTAAAATGCATCT 57.722 33.333 21.20 0.00 0.00 2.90
2380 6357 8.839310 ACTAAAATGCATCTACATACATCTCC 57.161 34.615 0.00 0.00 0.00 3.71
2381 6358 8.654997 ACTAAAATGCATCTACATACATCTCCT 58.345 33.333 0.00 0.00 0.00 3.69
2382 6359 9.499479 CTAAAATGCATCTACATACATCTCCTT 57.501 33.333 0.00 0.00 0.00 3.36
2383 6360 8.757982 AAAATGCATCTACATACATCTCCTTT 57.242 30.769 0.00 0.00 0.00 3.11
2384 6361 8.757982 AAATGCATCTACATACATCTCCTTTT 57.242 30.769 0.00 0.00 0.00 2.27
2385 6362 9.851686 AAATGCATCTACATACATCTCCTTTTA 57.148 29.630 0.00 0.00 0.00 1.52
2387 6364 9.664332 ATGCATCTACATACATCTCCTTTTATC 57.336 33.333 0.00 0.00 0.00 1.75
2388 6365 8.874156 TGCATCTACATACATCTCCTTTTATCT 58.126 33.333 0.00 0.00 0.00 1.98
2412 6389 9.443323 TCTATTTTGATGACAAGTATTTTCGGA 57.557 29.630 0.00 0.00 37.32 4.55
2413 6390 9.490663 CTATTTTGATGACAAGTATTTTCGGAC 57.509 33.333 0.00 0.00 37.32 4.79
2414 6391 6.869315 TTTGATGACAAGTATTTTCGGACA 57.131 33.333 0.00 0.00 37.32 4.02
2415 6392 6.480524 TTGATGACAAGTATTTTCGGACAG 57.519 37.500 0.00 0.00 0.00 3.51
2416 6393 5.789521 TGATGACAAGTATTTTCGGACAGA 58.210 37.500 0.00 0.00 0.00 3.41
2417 6394 5.869344 TGATGACAAGTATTTTCGGACAGAG 59.131 40.000 0.00 0.00 0.00 3.35
2418 6395 4.566004 TGACAAGTATTTTCGGACAGAGG 58.434 43.478 0.00 0.00 0.00 3.69
2419 6396 3.933332 GACAAGTATTTTCGGACAGAGGG 59.067 47.826 0.00 0.00 0.00 4.30
2420 6397 3.581332 ACAAGTATTTTCGGACAGAGGGA 59.419 43.478 0.00 0.00 0.00 4.20
2421 6398 4.184629 CAAGTATTTTCGGACAGAGGGAG 58.815 47.826 0.00 0.00 0.00 4.30
2422 6399 3.442076 AGTATTTTCGGACAGAGGGAGT 58.558 45.455 0.00 0.00 0.00 3.85
2423 6400 4.607239 AGTATTTTCGGACAGAGGGAGTA 58.393 43.478 0.00 0.00 0.00 2.59
2424 6401 5.209659 AGTATTTTCGGACAGAGGGAGTAT 58.790 41.667 0.00 0.00 0.00 2.12
2425 6402 3.887621 TTTTCGGACAGAGGGAGTATG 57.112 47.619 0.00 0.00 0.00 2.39
2426 6403 2.526888 TTCGGACAGAGGGAGTATGT 57.473 50.000 0.00 0.00 31.51 2.29
2427 6404 2.526888 TCGGACAGAGGGAGTATGTT 57.473 50.000 0.00 0.00 27.90 2.71
2428 6405 2.816411 TCGGACAGAGGGAGTATGTTT 58.184 47.619 0.00 0.00 27.90 2.83
2429 6406 3.170717 TCGGACAGAGGGAGTATGTTTT 58.829 45.455 0.00 0.00 27.90 2.43
2430 6407 3.056107 TCGGACAGAGGGAGTATGTTTTG 60.056 47.826 0.00 0.00 27.90 2.44
2431 6408 3.010420 GGACAGAGGGAGTATGTTTTGC 58.990 50.000 0.00 0.00 27.90 3.68
2432 6409 3.307762 GGACAGAGGGAGTATGTTTTGCT 60.308 47.826 0.00 0.00 27.90 3.91
2433 6410 4.081087 GGACAGAGGGAGTATGTTTTGCTA 60.081 45.833 0.00 0.00 27.90 3.49
2434 6411 4.833390 ACAGAGGGAGTATGTTTTGCTAC 58.167 43.478 0.00 0.00 0.00 3.58
2435 6412 4.286032 ACAGAGGGAGTATGTTTTGCTACA 59.714 41.667 0.00 0.00 0.00 2.74
2436 6413 4.872691 CAGAGGGAGTATGTTTTGCTACAG 59.127 45.833 0.00 0.00 0.00 2.74
2437 6414 4.532521 AGAGGGAGTATGTTTTGCTACAGT 59.467 41.667 0.00 0.00 0.00 3.55
2438 6415 5.720041 AGAGGGAGTATGTTTTGCTACAGTA 59.280 40.000 0.00 0.00 0.00 2.74
2439 6416 5.731591 AGGGAGTATGTTTTGCTACAGTAC 58.268 41.667 0.00 0.00 0.00 2.73
2440 6417 5.247564 AGGGAGTATGTTTTGCTACAGTACA 59.752 40.000 0.00 0.00 0.00 2.90
2441 6418 5.935789 GGGAGTATGTTTTGCTACAGTACAA 59.064 40.000 0.00 0.00 0.00 2.41
2442 6419 6.428771 GGGAGTATGTTTTGCTACAGTACAAA 59.571 38.462 0.00 4.94 34.11 2.83
2443 6420 7.040961 GGGAGTATGTTTTGCTACAGTACAAAA 60.041 37.037 12.99 12.99 41.97 2.44
2444 6421 8.512138 GGAGTATGTTTTGCTACAGTACAAAAT 58.488 33.333 17.02 9.74 44.81 1.82
2445 6422 9.329913 GAGTATGTTTTGCTACAGTACAAAATG 57.670 33.333 17.02 0.00 44.81 2.32
2446 6423 8.846211 AGTATGTTTTGCTACAGTACAAAATGT 58.154 29.630 17.02 13.21 44.81 2.71
2447 6424 7.928908 ATGTTTTGCTACAGTACAAAATGTG 57.071 32.000 17.02 0.00 44.81 3.21
2448 6425 6.269315 TGTTTTGCTACAGTACAAAATGTGG 58.731 36.000 17.02 0.00 44.81 4.17
2449 6426 6.095580 TGTTTTGCTACAGTACAAAATGTGGA 59.904 34.615 17.02 0.98 44.81 4.02
2450 6427 6.892658 TTTGCTACAGTACAAAATGTGGAT 57.107 33.333 0.00 0.00 33.06 3.41
2451 6428 5.878332 TGCTACAGTACAAAATGTGGATG 57.122 39.130 0.00 0.00 30.12 3.51
2452 6429 4.699735 TGCTACAGTACAAAATGTGGATGG 59.300 41.667 0.00 0.00 30.12 3.51
2453 6430 4.096382 GCTACAGTACAAAATGTGGATGGG 59.904 45.833 0.00 0.00 30.12 4.00
2454 6431 4.112634 ACAGTACAAAATGTGGATGGGT 57.887 40.909 0.00 0.00 0.00 4.51
2455 6432 3.826157 ACAGTACAAAATGTGGATGGGTG 59.174 43.478 0.00 0.00 0.00 4.61
2456 6433 2.825532 AGTACAAAATGTGGATGGGTGC 59.174 45.455 0.00 0.00 0.00 5.01
2457 6434 0.975887 ACAAAATGTGGATGGGTGCC 59.024 50.000 0.00 0.00 0.00 5.01
2458 6435 1.269012 CAAAATGTGGATGGGTGCCT 58.731 50.000 0.00 0.00 0.00 4.75
2459 6436 1.624813 CAAAATGTGGATGGGTGCCTT 59.375 47.619 0.00 0.00 0.00 4.35
2460 6437 1.560505 AAATGTGGATGGGTGCCTTC 58.439 50.000 0.00 0.00 0.00 3.46
2461 6438 0.324645 AATGTGGATGGGTGCCTTCC 60.325 55.000 0.00 0.00 44.98 3.46
2464 6441 4.018409 GGATGGGTGCCTTCCAAC 57.982 61.111 0.00 0.00 44.38 3.77
2465 6442 1.384191 GGATGGGTGCCTTCCAACT 59.616 57.895 0.00 0.00 44.38 3.16
2466 6443 0.251787 GGATGGGTGCCTTCCAACTT 60.252 55.000 0.00 0.00 44.38 2.66
2467 6444 1.005450 GGATGGGTGCCTTCCAACTTA 59.995 52.381 0.00 0.00 44.38 2.24
2468 6445 2.092323 GATGGGTGCCTTCCAACTTAC 58.908 52.381 0.00 0.00 37.87 2.34
2469 6446 0.847373 TGGGTGCCTTCCAACTTACA 59.153 50.000 0.00 0.00 0.00 2.41
2470 6447 1.202879 TGGGTGCCTTCCAACTTACAG 60.203 52.381 0.00 0.00 0.00 2.74
2471 6448 1.202891 GGGTGCCTTCCAACTTACAGT 60.203 52.381 0.00 0.00 0.00 3.55
2472 6449 1.880027 GGTGCCTTCCAACTTACAGTG 59.120 52.381 0.00 0.00 0.00 3.66
2473 6450 2.572290 GTGCCTTCCAACTTACAGTGT 58.428 47.619 0.00 0.00 0.00 3.55
2474 6451 3.495453 GGTGCCTTCCAACTTACAGTGTA 60.495 47.826 0.00 0.00 0.00 2.90
2475 6452 4.324267 GTGCCTTCCAACTTACAGTGTAT 58.676 43.478 3.28 0.00 0.00 2.29
2476 6453 5.484715 GTGCCTTCCAACTTACAGTGTATA 58.515 41.667 3.28 0.00 0.00 1.47
2477 6454 5.581085 GTGCCTTCCAACTTACAGTGTATAG 59.419 44.000 3.28 7.28 0.00 1.31
2478 6455 4.571176 GCCTTCCAACTTACAGTGTATAGC 59.429 45.833 3.28 0.00 0.00 2.97
2479 6456 5.730550 CCTTCCAACTTACAGTGTATAGCA 58.269 41.667 3.28 0.00 0.00 3.49
2480 6457 6.349300 CCTTCCAACTTACAGTGTATAGCAT 58.651 40.000 3.28 0.00 0.00 3.79
2481 6458 7.497595 CCTTCCAACTTACAGTGTATAGCATA 58.502 38.462 3.28 0.00 0.00 3.14
2482 6459 8.150945 CCTTCCAACTTACAGTGTATAGCATAT 58.849 37.037 3.28 0.00 0.00 1.78
2483 6460 8.887036 TTCCAACTTACAGTGTATAGCATATG 57.113 34.615 3.28 0.00 0.00 1.78
2484 6461 6.929049 TCCAACTTACAGTGTATAGCATATGC 59.071 38.462 20.36 20.36 42.49 3.14
2485 6462 6.147821 CCAACTTACAGTGTATAGCATATGCC 59.852 42.308 23.96 9.30 43.38 4.40
2486 6463 6.672266 ACTTACAGTGTATAGCATATGCCT 57.328 37.500 23.96 14.16 43.38 4.75
2487 6464 7.067496 ACTTACAGTGTATAGCATATGCCTT 57.933 36.000 23.96 13.96 43.38 4.35
2488 6465 7.155328 ACTTACAGTGTATAGCATATGCCTTC 58.845 38.462 23.96 12.43 43.38 3.46
2489 6466 4.899502 ACAGTGTATAGCATATGCCTTCC 58.100 43.478 23.96 10.61 43.38 3.46
2490 6467 4.347876 ACAGTGTATAGCATATGCCTTCCA 59.652 41.667 23.96 13.02 43.38 3.53
2491 6468 4.934001 CAGTGTATAGCATATGCCTTCCAG 59.066 45.833 23.96 4.36 43.38 3.86
2492 6469 3.686726 GTGTATAGCATATGCCTTCCAGC 59.313 47.826 23.96 8.79 43.38 4.85
2493 6470 2.503895 ATAGCATATGCCTTCCAGCC 57.496 50.000 23.96 0.00 43.38 4.85
2494 6471 0.401738 TAGCATATGCCTTCCAGCCC 59.598 55.000 23.96 0.00 43.38 5.19
2495 6472 1.152368 GCATATGCCTTCCAGCCCT 59.848 57.895 17.26 0.00 34.31 5.19
2496 6473 0.468771 GCATATGCCTTCCAGCCCTT 60.469 55.000 17.26 0.00 34.31 3.95
2497 6474 1.613836 CATATGCCTTCCAGCCCTTC 58.386 55.000 0.00 0.00 0.00 3.46
2498 6475 0.480252 ATATGCCTTCCAGCCCTTCC 59.520 55.000 0.00 0.00 0.00 3.46
2499 6476 0.624500 TATGCCTTCCAGCCCTTCCT 60.625 55.000 0.00 0.00 0.00 3.36
2500 6477 2.044551 GCCTTCCAGCCCTTCCTG 60.045 66.667 0.00 0.00 0.00 3.86
2501 6478 2.911926 GCCTTCCAGCCCTTCCTGT 61.912 63.158 0.00 0.00 0.00 4.00
2502 6479 1.770324 CCTTCCAGCCCTTCCTGTT 59.230 57.895 0.00 0.00 0.00 3.16
2503 6480 0.610232 CCTTCCAGCCCTTCCTGTTG 60.610 60.000 0.00 0.00 0.00 3.33
2504 6481 1.228552 TTCCAGCCCTTCCTGTTGC 60.229 57.895 0.00 0.00 0.00 4.17
2505 6482 2.677875 CCAGCCCTTCCTGTTGCC 60.678 66.667 0.00 0.00 0.00 4.52
2506 6483 2.437897 CAGCCCTTCCTGTTGCCT 59.562 61.111 0.00 0.00 0.00 4.75
2507 6484 1.676967 CAGCCCTTCCTGTTGCCTC 60.677 63.158 0.00 0.00 0.00 4.70
2508 6485 2.361737 GCCCTTCCTGTTGCCTCC 60.362 66.667 0.00 0.00 0.00 4.30
2509 6486 2.356667 CCCTTCCTGTTGCCTCCC 59.643 66.667 0.00 0.00 0.00 4.30
2510 6487 2.356667 CCTTCCTGTTGCCTCCCC 59.643 66.667 0.00 0.00 0.00 4.81
2511 6488 2.538141 CCTTCCTGTTGCCTCCCCA 61.538 63.158 0.00 0.00 0.00 4.96
2512 6489 1.693640 CTTCCTGTTGCCTCCCCAT 59.306 57.895 0.00 0.00 0.00 4.00
2513 6490 0.682209 CTTCCTGTTGCCTCCCCATG 60.682 60.000 0.00 0.00 0.00 3.66
2514 6491 1.434513 TTCCTGTTGCCTCCCCATGT 61.435 55.000 0.00 0.00 0.00 3.21
2515 6492 1.077265 CCTGTTGCCTCCCCATGTT 59.923 57.895 0.00 0.00 0.00 2.71
2516 6493 0.331278 CCTGTTGCCTCCCCATGTTA 59.669 55.000 0.00 0.00 0.00 2.41
2517 6494 1.463674 CTGTTGCCTCCCCATGTTAC 58.536 55.000 0.00 0.00 0.00 2.50
2518 6495 0.774276 TGTTGCCTCCCCATGTTACA 59.226 50.000 0.00 0.00 0.00 2.41
2519 6496 1.271871 TGTTGCCTCCCCATGTTACAG 60.272 52.381 0.00 0.00 0.00 2.74
2520 6497 1.004277 GTTGCCTCCCCATGTTACAGA 59.996 52.381 0.00 0.00 0.00 3.41
2521 6498 1.367346 TGCCTCCCCATGTTACAGAA 58.633 50.000 0.00 0.00 0.00 3.02
2522 6499 1.707989 TGCCTCCCCATGTTACAGAAA 59.292 47.619 0.00 0.00 0.00 2.52
2523 6500 2.290896 TGCCTCCCCATGTTACAGAAAG 60.291 50.000 0.00 0.00 0.00 2.62
2524 6501 2.369394 CCTCCCCATGTTACAGAAAGC 58.631 52.381 0.00 0.00 0.00 3.51
2525 6502 2.369394 CTCCCCATGTTACAGAAAGCC 58.631 52.381 0.00 0.00 0.00 4.35
2526 6503 1.094785 CCCCATGTTACAGAAAGCCG 58.905 55.000 0.00 0.00 0.00 5.52
2527 6504 1.094785 CCCATGTTACAGAAAGCCGG 58.905 55.000 0.00 0.00 0.00 6.13
2528 6505 0.451783 CCATGTTACAGAAAGCCGGC 59.548 55.000 21.89 21.89 0.00 6.13
2529 6506 0.451783 CATGTTACAGAAAGCCGGCC 59.548 55.000 26.15 8.19 0.00 6.13
2530 6507 0.037590 ATGTTACAGAAAGCCGGCCA 59.962 50.000 26.15 11.14 0.00 5.36
2531 6508 0.605319 TGTTACAGAAAGCCGGCCAG 60.605 55.000 26.15 11.34 0.00 4.85
2532 6509 1.674322 TTACAGAAAGCCGGCCAGC 60.674 57.895 26.15 12.78 0.00 4.85
2534 6511 1.261938 TACAGAAAGCCGGCCAGCTA 61.262 55.000 26.15 2.10 44.11 3.32
2535 6512 2.109126 CAGAAAGCCGGCCAGCTAC 61.109 63.158 26.15 11.70 44.11 3.58
2536 6513 2.269241 GAAAGCCGGCCAGCTACT 59.731 61.111 26.15 4.32 44.11 2.57
2537 6514 1.815840 GAAAGCCGGCCAGCTACTC 60.816 63.158 26.15 10.48 44.11 2.59
2538 6515 2.245438 GAAAGCCGGCCAGCTACTCT 62.245 60.000 26.15 0.00 44.11 3.24
2539 6516 2.527951 AAAGCCGGCCAGCTACTCTG 62.528 60.000 26.15 0.00 44.11 3.35
2540 6517 3.461773 GCCGGCCAGCTACTCTGA 61.462 66.667 18.11 0.00 45.72 3.27
2541 6518 2.496817 CCGGCCAGCTACTCTGAC 59.503 66.667 2.24 0.00 45.72 3.51
2542 6519 2.351244 CCGGCCAGCTACTCTGACA 61.351 63.158 2.24 0.00 45.72 3.58
2543 6520 1.140589 CGGCCAGCTACTCTGACAG 59.859 63.158 2.24 0.00 45.72 3.51
2544 6521 1.153469 GGCCAGCTACTCTGACAGC 60.153 63.158 0.00 0.00 45.72 4.40
2545 6522 1.153469 GCCAGCTACTCTGACAGCC 60.153 63.158 0.00 0.00 45.72 4.85
2546 6523 1.612395 GCCAGCTACTCTGACAGCCT 61.612 60.000 0.00 0.00 45.72 4.58
2547 6524 0.901124 CCAGCTACTCTGACAGCCTT 59.099 55.000 0.00 0.00 45.72 4.35
2548 6525 1.277557 CCAGCTACTCTGACAGCCTTT 59.722 52.381 0.00 0.00 45.72 3.11
2549 6526 2.344950 CAGCTACTCTGACAGCCTTTG 58.655 52.381 0.00 0.00 45.72 2.77
2550 6527 1.082690 GCTACTCTGACAGCCTTTGC 58.917 55.000 0.00 0.00 37.95 3.68
2551 6528 1.609061 GCTACTCTGACAGCCTTTGCA 60.609 52.381 0.00 0.00 41.13 4.08
2552 6529 2.938756 GCTACTCTGACAGCCTTTGCAT 60.939 50.000 0.00 0.00 41.13 3.96
2553 6530 3.679917 GCTACTCTGACAGCCTTTGCATA 60.680 47.826 0.00 0.00 41.13 3.14
2554 6531 2.983229 ACTCTGACAGCCTTTGCATAG 58.017 47.619 0.00 0.00 41.13 2.23
2555 6532 2.568956 ACTCTGACAGCCTTTGCATAGA 59.431 45.455 5.65 0.00 41.13 1.98
2556 6533 2.935201 CTCTGACAGCCTTTGCATAGAC 59.065 50.000 5.65 0.00 41.13 2.59
2557 6534 2.302733 TCTGACAGCCTTTGCATAGACA 59.697 45.455 5.65 0.00 41.13 3.41
2558 6535 2.417933 CTGACAGCCTTTGCATAGACAC 59.582 50.000 5.65 0.00 41.13 3.67
2559 6536 1.740025 GACAGCCTTTGCATAGACACC 59.260 52.381 5.65 0.00 41.13 4.16
2560 6537 1.073763 ACAGCCTTTGCATAGACACCA 59.926 47.619 5.65 0.00 41.13 4.17
2561 6538 2.161855 CAGCCTTTGCATAGACACCAA 58.838 47.619 5.65 0.00 41.13 3.67
2562 6539 2.163010 CAGCCTTTGCATAGACACCAAG 59.837 50.000 5.65 0.00 41.13 3.61
2563 6540 2.040278 AGCCTTTGCATAGACACCAAGA 59.960 45.455 5.65 0.00 41.13 3.02
2564 6541 2.819608 GCCTTTGCATAGACACCAAGAA 59.180 45.455 5.65 0.00 37.47 2.52
2565 6542 3.445096 GCCTTTGCATAGACACCAAGAAT 59.555 43.478 5.65 0.00 37.47 2.40
2566 6543 4.082026 GCCTTTGCATAGACACCAAGAATT 60.082 41.667 5.65 0.00 37.47 2.17
2567 6544 6.132236 GCCTTTGCATAGACACCAAGAATTG 61.132 44.000 5.65 0.00 41.22 2.32
2568 6545 5.047802 CCTTTGCATAGACACCAAGAATTGT 60.048 40.000 5.65 0.00 46.99 2.71
2569 6546 5.627499 TTGCATAGACACCAAGAATTGTC 57.373 39.130 0.00 0.00 46.99 3.18
2570 6547 4.650734 TGCATAGACACCAAGAATTGTCA 58.349 39.130 4.66 0.00 46.99 3.58
2571 6548 5.069318 TGCATAGACACCAAGAATTGTCAA 58.931 37.500 4.66 0.00 46.99 3.18
2572 6549 5.181811 TGCATAGACACCAAGAATTGTCAAG 59.818 40.000 4.66 0.00 46.99 3.02
2573 6550 5.634896 CATAGACACCAAGAATTGTCAAGC 58.365 41.667 4.66 0.00 46.99 4.01
2574 6551 3.554934 AGACACCAAGAATTGTCAAGCA 58.445 40.909 4.66 0.00 46.99 3.91
2575 6552 4.147321 AGACACCAAGAATTGTCAAGCAT 58.853 39.130 4.66 0.00 46.99 3.79
2576 6553 4.022589 AGACACCAAGAATTGTCAAGCATG 60.023 41.667 4.66 0.00 46.99 4.06
2577 6554 3.890756 ACACCAAGAATTGTCAAGCATGA 59.109 39.130 0.00 0.00 46.99 3.07
2578 6555 4.341806 ACACCAAGAATTGTCAAGCATGAA 59.658 37.500 0.00 0.00 46.99 2.57
2579 6556 5.163426 ACACCAAGAATTGTCAAGCATGAAA 60.163 36.000 0.00 0.00 46.99 2.69
2580 6557 5.754406 CACCAAGAATTGTCAAGCATGAAAA 59.246 36.000 0.00 0.00 46.99 2.29
2581 6558 6.425721 CACCAAGAATTGTCAAGCATGAAAAT 59.574 34.615 1.41 1.41 46.99 1.82
2582 6559 6.425721 ACCAAGAATTGTCAAGCATGAAAATG 59.574 34.615 8.07 0.00 46.99 2.32
2583 6560 6.128391 CCAAGAATTGTCAAGCATGAAAATGG 60.128 38.462 8.07 3.35 46.99 3.16
2584 6561 4.933400 AGAATTGTCAAGCATGAAAATGGC 59.067 37.500 8.07 4.41 41.68 4.40
2585 6562 2.350899 TGTCAAGCATGAAAATGGCG 57.649 45.000 0.00 0.00 37.30 5.69
2586 6563 1.885233 TGTCAAGCATGAAAATGGCGA 59.115 42.857 0.00 0.00 37.30 5.54
2587 6564 2.492881 TGTCAAGCATGAAAATGGCGAT 59.507 40.909 0.00 0.00 37.30 4.58
2588 6565 2.855963 GTCAAGCATGAAAATGGCGATG 59.144 45.455 0.00 0.00 37.30 3.84
2589 6566 2.492881 TCAAGCATGAAAATGGCGATGT 59.507 40.909 0.00 0.00 30.99 3.06
2590 6567 3.056678 TCAAGCATGAAAATGGCGATGTT 60.057 39.130 0.00 0.00 30.99 2.71
2591 6568 2.883574 AGCATGAAAATGGCGATGTTG 58.116 42.857 0.00 0.00 0.00 3.33
2592 6569 1.325338 GCATGAAAATGGCGATGTTGC 59.675 47.619 0.00 0.00 0.00 4.17
2593 6570 2.608268 CATGAAAATGGCGATGTTGCA 58.392 42.857 0.00 0.00 36.28 4.08
2594 6571 3.191669 CATGAAAATGGCGATGTTGCAT 58.808 40.909 0.00 0.00 36.28 3.96
2595 6572 4.361420 CATGAAAATGGCGATGTTGCATA 58.639 39.130 0.00 0.00 36.28 3.14
2596 6573 3.768406 TGAAAATGGCGATGTTGCATAC 58.232 40.909 0.00 0.00 36.28 2.39
2597 6574 3.192212 TGAAAATGGCGATGTTGCATACA 59.808 39.130 4.56 4.56 41.97 2.29
2612 6589 9.709495 ATGTTGCATACATTTGTCTGTATTTTT 57.291 25.926 8.21 0.00 45.19 1.94
2616 6593 9.800433 TGCATACATTTGTCTGTATTTTTATGG 57.200 29.630 0.00 0.00 39.69 2.74
2620 6597 8.964420 ACATTTGTCTGTATTTTTATGGAACG 57.036 30.769 0.00 0.00 0.00 3.95
2621 6598 8.788806 ACATTTGTCTGTATTTTTATGGAACGA 58.211 29.630 0.00 0.00 0.00 3.85
2622 6599 9.619316 CATTTGTCTGTATTTTTATGGAACGAA 57.381 29.630 0.00 0.00 0.00 3.85
2623 6600 9.840427 ATTTGTCTGTATTTTTATGGAACGAAG 57.160 29.630 0.00 0.00 0.00 3.79
2624 6601 8.610248 TTGTCTGTATTTTTATGGAACGAAGA 57.390 30.769 0.00 0.00 0.00 2.87
2625 6602 8.251750 TGTCTGTATTTTTATGGAACGAAGAG 57.748 34.615 0.00 0.00 0.00 2.85
2626 6603 8.092068 TGTCTGTATTTTTATGGAACGAAGAGA 58.908 33.333 0.00 0.00 0.00 3.10
2627 6604 8.381387 GTCTGTATTTTTATGGAACGAAGAGAC 58.619 37.037 0.00 0.00 0.00 3.36
2628 6605 8.311836 TCTGTATTTTTATGGAACGAAGAGACT 58.688 33.333 0.00 0.00 0.00 3.24
2629 6606 8.842358 TGTATTTTTATGGAACGAAGAGACTT 57.158 30.769 0.00 0.00 0.00 3.01
2630 6607 9.932207 TGTATTTTTATGGAACGAAGAGACTTA 57.068 29.630 0.00 0.00 0.00 2.24
2635 6612 9.720769 TTTTATGGAACGAAGAGACTTATTTCT 57.279 29.630 0.00 0.00 0.00 2.52
2636 6613 9.720769 TTTATGGAACGAAGAGACTTATTTCTT 57.279 29.630 0.00 0.00 36.41 2.52
2637 6614 7.602517 ATGGAACGAAGAGACTTATTTCTTG 57.397 36.000 0.00 0.00 33.97 3.02
2638 6615 6.755206 TGGAACGAAGAGACTTATTTCTTGA 58.245 36.000 0.00 0.00 33.97 3.02
2639 6616 7.386851 TGGAACGAAGAGACTTATTTCTTGAT 58.613 34.615 0.00 0.00 33.97 2.57
2640 6617 7.878127 TGGAACGAAGAGACTTATTTCTTGATT 59.122 33.333 0.00 0.00 33.97 2.57
2641 6618 8.171840 GGAACGAAGAGACTTATTTCTTGATTG 58.828 37.037 0.00 0.00 33.97 2.67
2642 6619 8.833231 AACGAAGAGACTTATTTCTTGATTGA 57.167 30.769 0.00 0.00 33.97 2.57
2643 6620 9.442047 AACGAAGAGACTTATTTCTTGATTGAT 57.558 29.630 0.00 0.00 33.97 2.57
2644 6621 8.877779 ACGAAGAGACTTATTTCTTGATTGATG 58.122 33.333 0.00 0.00 33.97 3.07
2645 6622 7.850003 CGAAGAGACTTATTTCTTGATTGATGC 59.150 37.037 0.00 0.00 33.97 3.91
2646 6623 8.804912 AAGAGACTTATTTCTTGATTGATGCT 57.195 30.769 0.00 0.00 32.65 3.79
2647 6624 8.211116 AGAGACTTATTTCTTGATTGATGCTG 57.789 34.615 0.00 0.00 0.00 4.41
2648 6625 7.282675 AGAGACTTATTTCTTGATTGATGCTGG 59.717 37.037 0.00 0.00 0.00 4.85
2649 6626 7.114754 AGACTTATTTCTTGATTGATGCTGGA 58.885 34.615 0.00 0.00 0.00 3.86
2650 6627 7.613022 AGACTTATTTCTTGATTGATGCTGGAA 59.387 33.333 0.00 0.00 0.00 3.53
2651 6628 8.125978 ACTTATTTCTTGATTGATGCTGGAAA 57.874 30.769 0.00 0.00 0.00 3.13
2652 6629 8.587608 ACTTATTTCTTGATTGATGCTGGAAAA 58.412 29.630 0.00 0.00 0.00 2.29
2653 6630 9.426837 CTTATTTCTTGATTGATGCTGGAAAAA 57.573 29.630 0.00 0.00 0.00 1.94
2654 6631 7.900782 ATTTCTTGATTGATGCTGGAAAAAG 57.099 32.000 0.00 0.00 0.00 2.27
2655 6632 5.395682 TCTTGATTGATGCTGGAAAAAGG 57.604 39.130 0.00 0.00 0.00 3.11
2656 6633 5.078949 TCTTGATTGATGCTGGAAAAAGGA 58.921 37.500 0.00 0.00 0.00 3.36
2657 6634 5.539574 TCTTGATTGATGCTGGAAAAAGGAA 59.460 36.000 0.00 0.00 0.00 3.36
2658 6635 5.804944 TGATTGATGCTGGAAAAAGGAAA 57.195 34.783 0.00 0.00 0.00 3.13
2659 6636 6.363167 TGATTGATGCTGGAAAAAGGAAAT 57.637 33.333 0.00 0.00 0.00 2.17
2660 6637 6.771573 TGATTGATGCTGGAAAAAGGAAATT 58.228 32.000 0.00 0.00 0.00 1.82
2661 6638 7.225725 TGATTGATGCTGGAAAAAGGAAATTT 58.774 30.769 0.00 0.00 0.00 1.82
2662 6639 6.864360 TTGATGCTGGAAAAAGGAAATTTG 57.136 33.333 0.00 0.00 0.00 2.32
2663 6640 4.756135 TGATGCTGGAAAAAGGAAATTTGC 59.244 37.500 0.68 0.68 0.00 3.68
2664 6641 4.420522 TGCTGGAAAAAGGAAATTTGCT 57.579 36.364 6.36 6.36 0.00 3.91
2665 6642 5.543507 TGCTGGAAAAAGGAAATTTGCTA 57.456 34.783 13.01 0.00 0.00 3.49
2666 6643 5.296748 TGCTGGAAAAAGGAAATTTGCTAC 58.703 37.500 13.01 5.33 0.00 3.58
2667 6644 5.070313 TGCTGGAAAAAGGAAATTTGCTACT 59.930 36.000 13.01 0.57 0.00 2.57
2668 6645 5.991606 GCTGGAAAAAGGAAATTTGCTACTT 59.008 36.000 13.01 9.00 0.00 2.24
2669 6646 6.146184 GCTGGAAAAAGGAAATTTGCTACTTC 59.854 38.462 13.01 16.21 0.00 3.01
2670 6647 6.521162 TGGAAAAAGGAAATTTGCTACTTCC 58.479 36.000 28.17 28.17 38.68 3.46
2671 6648 6.098982 TGGAAAAAGGAAATTTGCTACTTCCA 59.901 34.615 30.92 30.92 42.14 3.53
2672 6649 7.161404 GGAAAAAGGAAATTTGCTACTTCCAT 58.839 34.615 29.03 9.04 41.00 3.41
2673 6650 7.661437 GGAAAAAGGAAATTTGCTACTTCCATT 59.339 33.333 29.03 13.26 41.00 3.16
2674 6651 9.705290 GAAAAAGGAAATTTGCTACTTCCATTA 57.295 29.630 13.01 0.00 41.00 1.90
2685 6662 8.848474 TTGCTACTTCCATTATTAATAGAGCC 57.152 34.615 0.00 0.00 0.00 4.70
2686 6663 7.973402 TGCTACTTCCATTATTAATAGAGCCA 58.027 34.615 0.00 0.00 0.00 4.75
2687 6664 7.878127 TGCTACTTCCATTATTAATAGAGCCAC 59.122 37.037 0.00 0.00 0.00 5.01
2688 6665 7.878127 GCTACTTCCATTATTAATAGAGCCACA 59.122 37.037 0.00 0.00 0.00 4.17
2689 6666 9.778741 CTACTTCCATTATTAATAGAGCCACAA 57.221 33.333 0.00 0.00 0.00 3.33
2691 6668 9.125026 ACTTCCATTATTAATAGAGCCACAAAG 57.875 33.333 0.00 0.00 0.00 2.77
2692 6669 8.463930 TTCCATTATTAATAGAGCCACAAAGG 57.536 34.615 0.00 0.00 41.84 3.11
2693 6670 7.811282 TCCATTATTAATAGAGCCACAAAGGA 58.189 34.615 0.00 0.00 41.22 3.36
2694 6671 8.278639 TCCATTATTAATAGAGCCACAAAGGAA 58.721 33.333 0.00 0.00 41.22 3.36
2695 6672 8.571336 CCATTATTAATAGAGCCACAAAGGAAG 58.429 37.037 0.00 0.00 41.22 3.46
2696 6673 9.125026 CATTATTAATAGAGCCACAAAGGAAGT 57.875 33.333 0.00 0.00 41.22 3.01
2697 6674 9.700831 ATTATTAATAGAGCCACAAAGGAAGTT 57.299 29.630 0.00 0.00 41.22 2.66
2698 6675 6.817765 TTAATAGAGCCACAAAGGAAGTTG 57.182 37.500 0.00 0.00 41.22 3.16
2699 6676 1.986882 AGAGCCACAAAGGAAGTTGG 58.013 50.000 0.00 0.00 41.22 3.77
2700 6677 0.961753 GAGCCACAAAGGAAGTTGGG 59.038 55.000 0.00 0.00 41.22 4.12
2701 6678 1.115326 AGCCACAAAGGAAGTTGGGC 61.115 55.000 0.00 0.00 41.44 5.36
2702 6679 1.398958 GCCACAAAGGAAGTTGGGCA 61.399 55.000 10.59 0.00 41.10 5.36
2703 6680 1.341080 CCACAAAGGAAGTTGGGCAT 58.659 50.000 0.00 0.00 41.22 4.40
2704 6681 1.273327 CCACAAAGGAAGTTGGGCATC 59.727 52.381 0.00 0.00 41.22 3.91
2705 6682 2.242043 CACAAAGGAAGTTGGGCATCT 58.758 47.619 0.00 0.00 32.50 2.90
2706 6683 3.420893 CACAAAGGAAGTTGGGCATCTA 58.579 45.455 0.00 0.00 32.50 1.98
2707 6684 3.441572 CACAAAGGAAGTTGGGCATCTAG 59.558 47.826 0.00 0.00 32.50 2.43
2708 6685 3.074538 ACAAAGGAAGTTGGGCATCTAGT 59.925 43.478 0.00 0.00 32.50 2.57
2709 6686 4.082125 CAAAGGAAGTTGGGCATCTAGTT 58.918 43.478 0.00 0.00 0.00 2.24
2710 6687 3.636153 AGGAAGTTGGGCATCTAGTTC 57.364 47.619 0.00 0.00 32.33 3.01
2711 6688 2.093447 AGGAAGTTGGGCATCTAGTTCG 60.093 50.000 0.00 0.00 33.38 3.95
2712 6689 1.666189 GAAGTTGGGCATCTAGTTCGC 59.334 52.381 0.00 0.00 0.00 4.70
2862 7114 3.911661 AGAGAAGCAGCACAATCAAAC 57.088 42.857 0.00 0.00 0.00 2.93
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
43 44 9.169592 CCTAGTTTTATTCCAACTCGGATTTAA 57.830 33.333 0.00 0.00 45.80 1.52
105 108 6.186234 AGCAAAGAATTCATCTAGGCTTTCT 58.814 36.000 8.44 0.00 42.02 2.52
122 125 4.193090 TGGACTTTTCGTACAAGCAAAGA 58.807 39.130 9.05 0.00 32.12 2.52
148 151 5.482580 TCACCCCCAACATATATAAGAGGT 58.517 41.667 0.00 0.00 0.00 3.85
220 223 7.182930 GGGTAGGGGATAAAGATAGATGAACAT 59.817 40.741 0.00 0.00 0.00 2.71
248 251 6.452735 ACGAATAACGAGAACGAAAAATACG 58.547 36.000 0.00 0.00 45.77 3.06
329 332 1.843376 GGCTATGGGCTGCCCTAGA 60.843 63.158 35.80 18.79 45.70 2.43
454 457 2.110967 GTGATGCACCGCAGCTCAT 61.111 57.895 5.76 0.00 45.80 2.90
571 575 4.845580 CGCGCTGCTTCCCATCCT 62.846 66.667 5.56 0.00 0.00 3.24
633 637 3.934962 GCCCCGCTCCTGATCTCC 61.935 72.222 0.00 0.00 0.00 3.71
662 666 2.693762 CCGCGACCGAGTTCCAGTA 61.694 63.158 8.23 0.00 36.29 2.74
695 739 3.496131 GAAGAAATCGCGCCGCCA 61.496 61.111 2.28 0.00 0.00 5.69
720 764 0.391263 CTCGTTGCTAGGTTCCCCAC 60.391 60.000 0.00 0.00 0.00 4.61
721 765 0.543410 TCTCGTTGCTAGGTTCCCCA 60.543 55.000 0.00 0.00 0.00 4.96
722 766 0.175989 CTCTCGTTGCTAGGTTCCCC 59.824 60.000 0.00 0.00 0.00 4.81
723 767 0.175989 CCTCTCGTTGCTAGGTTCCC 59.824 60.000 0.00 0.00 0.00 3.97
743 788 2.025727 GCCCACCGATACGTCTCG 59.974 66.667 15.64 15.64 38.37 4.04
747 801 3.524606 CCGAGCCCACCGATACGT 61.525 66.667 0.00 0.00 0.00 3.57
806 860 3.162666 CTGGCCTATTGGATCATGCATT 58.837 45.455 3.32 0.00 34.57 3.56
807 861 2.803956 CTGGCCTATTGGATCATGCAT 58.196 47.619 3.32 0.00 34.57 3.96
855 909 8.531146 CATTCCACAACCATAATCTACCTTTTT 58.469 33.333 0.00 0.00 0.00 1.94
856 910 7.673926 ACATTCCACAACCATAATCTACCTTTT 59.326 33.333 0.00 0.00 0.00 2.27
857 911 7.122650 CACATTCCACAACCATAATCTACCTTT 59.877 37.037 0.00 0.00 0.00 3.11
858 912 6.603201 CACATTCCACAACCATAATCTACCTT 59.397 38.462 0.00 0.00 0.00 3.50
859 913 6.122277 CACATTCCACAACCATAATCTACCT 58.878 40.000 0.00 0.00 0.00 3.08
860 914 5.299279 CCACATTCCACAACCATAATCTACC 59.701 44.000 0.00 0.00 0.00 3.18
861 915 6.119536 TCCACATTCCACAACCATAATCTAC 58.880 40.000 0.00 0.00 0.00 2.59
862 916 6.320434 TCCACATTCCACAACCATAATCTA 57.680 37.500 0.00 0.00 0.00 1.98
863 917 5.191727 TCCACATTCCACAACCATAATCT 57.808 39.130 0.00 0.00 0.00 2.40
864 918 5.277974 CGATCCACATTCCACAACCATAATC 60.278 44.000 0.00 0.00 0.00 1.75
865 919 4.580167 CGATCCACATTCCACAACCATAAT 59.420 41.667 0.00 0.00 0.00 1.28
866 920 3.944650 CGATCCACATTCCACAACCATAA 59.055 43.478 0.00 0.00 0.00 1.90
867 921 3.540617 CGATCCACATTCCACAACCATA 58.459 45.455 0.00 0.00 0.00 2.74
868 922 2.368439 CGATCCACATTCCACAACCAT 58.632 47.619 0.00 0.00 0.00 3.55
869 923 1.612991 CCGATCCACATTCCACAACCA 60.613 52.381 0.00 0.00 0.00 3.67
870 924 1.094785 CCGATCCACATTCCACAACC 58.905 55.000 0.00 0.00 0.00 3.77
871 925 0.451783 GCCGATCCACATTCCACAAC 59.548 55.000 0.00 0.00 0.00 3.32
872 926 1.024046 CGCCGATCCACATTCCACAA 61.024 55.000 0.00 0.00 0.00 3.33
873 927 1.449423 CGCCGATCCACATTCCACA 60.449 57.895 0.00 0.00 0.00 4.17
874 928 0.742990 TTCGCCGATCCACATTCCAC 60.743 55.000 0.00 0.00 0.00 4.02
875 929 0.742990 GTTCGCCGATCCACATTCCA 60.743 55.000 0.00 0.00 0.00 3.53
876 930 0.742990 TGTTCGCCGATCCACATTCC 60.743 55.000 0.00 0.00 0.00 3.01
877 931 0.652592 CTGTTCGCCGATCCACATTC 59.347 55.000 0.00 0.00 0.00 2.67
878 932 0.036388 ACTGTTCGCCGATCCACATT 60.036 50.000 0.00 0.00 0.00 2.71
879 933 0.036388 AACTGTTCGCCGATCCACAT 60.036 50.000 0.00 0.00 0.00 3.21
924 978 2.967615 GGGATTAGTGCGCGAGGC 60.968 66.667 12.10 0.00 43.96 4.70
926 980 1.592669 CAGGGGATTAGTGCGCGAG 60.593 63.158 12.10 0.00 33.74 5.03
927 981 1.609635 TTCAGGGGATTAGTGCGCGA 61.610 55.000 12.10 0.00 33.74 5.87
928 982 1.153449 TTCAGGGGATTAGTGCGCG 60.153 57.895 0.00 0.00 33.74 6.86
929 983 0.392461 TGTTCAGGGGATTAGTGCGC 60.392 55.000 0.00 0.00 0.00 6.09
930 984 1.369625 GTGTTCAGGGGATTAGTGCG 58.630 55.000 0.00 0.00 0.00 5.34
931 985 1.004277 TGGTGTTCAGGGGATTAGTGC 59.996 52.381 0.00 0.00 0.00 4.40
932 986 2.711542 GTGGTGTTCAGGGGATTAGTG 58.288 52.381 0.00 0.00 0.00 2.74
933 987 1.278127 CGTGGTGTTCAGGGGATTAGT 59.722 52.381 0.00 0.00 0.00 2.24
934 988 1.553248 TCGTGGTGTTCAGGGGATTAG 59.447 52.381 0.00 0.00 32.53 1.73
935 989 1.553248 CTCGTGGTGTTCAGGGGATTA 59.447 52.381 0.00 0.00 33.80 1.75
936 990 0.324943 CTCGTGGTGTTCAGGGGATT 59.675 55.000 0.00 0.00 33.80 3.01
937 991 0.544357 TCTCGTGGTGTTCAGGGGAT 60.544 55.000 0.00 0.00 35.99 3.85
938 992 1.152419 TCTCGTGGTGTTCAGGGGA 60.152 57.895 0.00 0.00 38.31 4.81
958 1264 1.099689 CCTCCTCTCTTCTCCGTGAC 58.900 60.000 0.00 0.00 0.00 3.67
961 1267 0.395173 GCTCCTCCTCTCTTCTCCGT 60.395 60.000 0.00 0.00 0.00 4.69
1061 1444 0.030705 AGCAGCAAGAGGAGGGGATA 60.031 55.000 0.00 0.00 0.00 2.59
1231 1632 1.234615 CGGGCTTGTTGTCGATGGTT 61.235 55.000 0.00 0.00 0.00 3.67
1284 1685 0.178876 TGGTGGATCTGGGTGGAGAA 60.179 55.000 0.00 0.00 0.00 2.87
1383 4929 8.462016 GGAACTCAAAATTCATACTGTGCTATT 58.538 33.333 0.00 0.00 0.00 1.73
1434 5090 3.769300 GCACAAGATGGGTTATTTTCCCT 59.231 43.478 2.65 0.00 44.84 4.20
1445 5101 1.003355 ACAGACGGCACAAGATGGG 60.003 57.895 0.00 0.00 0.00 4.00
1457 5113 5.234329 CCTGGCTATAATGTTAACACAGACG 59.766 44.000 11.22 1.24 35.94 4.18
1474 5130 0.395586 AATGCATTTCGGCCTGGCTA 60.396 50.000 19.68 4.26 0.00 3.93
1486 5142 6.037172 GGTGTAGTTAACGATCTGAATGCATT 59.963 38.462 12.83 12.83 0.00 3.56
1574 5230 1.377536 GGCAGCTTCCATTGTCTCTC 58.622 55.000 0.00 0.00 0.00 3.20
1905 5561 0.393820 CACAAAGGCCTTGGTTGCAT 59.606 50.000 23.73 0.00 39.56 3.96
1938 5624 3.091545 ACCCTGCATAAACAACATGAGG 58.908 45.455 0.00 0.00 0.00 3.86
2105 5794 2.592102 AAGGCCTTTCTGCTTCATCA 57.408 45.000 13.78 0.00 0.00 3.07
2119 5808 2.416893 GTCTTGAATCAGTCGAAAGGCC 59.583 50.000 0.00 0.00 35.23 5.19
2162 5851 9.325198 ACTGAGATCGTGCAATATTAAATAACA 57.675 29.630 0.00 0.00 0.00 2.41
2225 5914 5.612688 AGGATAACATAACACTCCCATCCAT 59.387 40.000 0.00 0.00 34.43 3.41
2300 6277 5.306937 TGACAAGTATTTTCAGACAGAGGGA 59.693 40.000 0.00 0.00 0.00 4.20
2301 6278 5.551233 TGACAAGTATTTTCAGACAGAGGG 58.449 41.667 0.00 0.00 0.00 4.30
2302 6279 6.875726 TGATGACAAGTATTTTCAGACAGAGG 59.124 38.462 0.00 0.00 0.00 3.69
2303 6280 7.895975 TGATGACAAGTATTTTCAGACAGAG 57.104 36.000 0.00 0.00 0.00 3.35
2304 6281 8.675705 TTTGATGACAAGTATTTTCAGACAGA 57.324 30.769 0.00 0.00 37.32 3.41
2305 6282 9.903682 ATTTTGATGACAAGTATTTTCAGACAG 57.096 29.630 0.00 0.00 37.32 3.51
2306 6283 9.681692 CATTTTGATGACAAGTATTTTCAGACA 57.318 29.630 0.00 0.00 37.32 3.41
2307 6284 9.897744 TCATTTTGATGACAAGTATTTTCAGAC 57.102 29.630 0.00 0.00 37.32 3.51
2339 6316 9.461312 TGCATTTTAGTTCTACATACATCCTTT 57.539 29.630 0.00 0.00 0.00 3.11
2340 6317 9.632638 ATGCATTTTAGTTCTACATACATCCTT 57.367 29.630 0.00 0.00 0.00 3.36
2341 6318 9.277783 GATGCATTTTAGTTCTACATACATCCT 57.722 33.333 0.00 0.00 0.00 3.24
2342 6319 9.277783 AGATGCATTTTAGTTCTACATACATCC 57.722 33.333 0.00 0.00 31.63 3.51
2354 6331 9.277783 GGAGATGTATGTAGATGCATTTTAGTT 57.722 33.333 0.00 0.00 35.26 2.24
2355 6332 8.654997 AGGAGATGTATGTAGATGCATTTTAGT 58.345 33.333 0.00 0.00 35.26 2.24
2356 6333 9.499479 AAGGAGATGTATGTAGATGCATTTTAG 57.501 33.333 0.00 0.00 35.26 1.85
2357 6334 9.851686 AAAGGAGATGTATGTAGATGCATTTTA 57.148 29.630 0.00 0.00 35.26 1.52
2358 6335 8.757982 AAAGGAGATGTATGTAGATGCATTTT 57.242 30.769 0.00 0.00 35.26 1.82
2359 6336 8.757982 AAAAGGAGATGTATGTAGATGCATTT 57.242 30.769 0.00 0.00 35.26 2.32
2361 6338 9.664332 GATAAAAGGAGATGTATGTAGATGCAT 57.336 33.333 0.00 0.00 37.59 3.96
2362 6339 8.874156 AGATAAAAGGAGATGTATGTAGATGCA 58.126 33.333 0.00 0.00 0.00 3.96
2386 6363 9.443323 TCCGAAAATACTTGTCATCAAAATAGA 57.557 29.630 0.00 0.00 32.87 1.98
2387 6364 9.490663 GTCCGAAAATACTTGTCATCAAAATAG 57.509 33.333 0.00 0.00 32.87 1.73
2388 6365 9.004717 TGTCCGAAAATACTTGTCATCAAAATA 57.995 29.630 0.00 0.00 32.87 1.40
2389 6366 7.881142 TGTCCGAAAATACTTGTCATCAAAAT 58.119 30.769 0.00 0.00 32.87 1.82
2390 6367 7.227711 TCTGTCCGAAAATACTTGTCATCAAAA 59.772 33.333 0.00 0.00 32.87 2.44
2391 6368 6.708502 TCTGTCCGAAAATACTTGTCATCAAA 59.291 34.615 0.00 0.00 32.87 2.69
2392 6369 6.227522 TCTGTCCGAAAATACTTGTCATCAA 58.772 36.000 0.00 0.00 0.00 2.57
2393 6370 5.789521 TCTGTCCGAAAATACTTGTCATCA 58.210 37.500 0.00 0.00 0.00 3.07
2394 6371 5.292101 CCTCTGTCCGAAAATACTTGTCATC 59.708 44.000 0.00 0.00 0.00 2.92
2395 6372 5.178797 CCTCTGTCCGAAAATACTTGTCAT 58.821 41.667 0.00 0.00 0.00 3.06
2396 6373 4.562757 CCCTCTGTCCGAAAATACTTGTCA 60.563 45.833 0.00 0.00 0.00 3.58
2397 6374 3.933332 CCCTCTGTCCGAAAATACTTGTC 59.067 47.826 0.00 0.00 0.00 3.18
2398 6375 3.581332 TCCCTCTGTCCGAAAATACTTGT 59.419 43.478 0.00 0.00 0.00 3.16
2399 6376 4.184629 CTCCCTCTGTCCGAAAATACTTG 58.815 47.826 0.00 0.00 0.00 3.16
2400 6377 3.838903 ACTCCCTCTGTCCGAAAATACTT 59.161 43.478 0.00 0.00 0.00 2.24
2401 6378 3.442076 ACTCCCTCTGTCCGAAAATACT 58.558 45.455 0.00 0.00 0.00 2.12
2402 6379 3.889520 ACTCCCTCTGTCCGAAAATAC 57.110 47.619 0.00 0.00 0.00 1.89
2403 6380 4.960469 ACATACTCCCTCTGTCCGAAAATA 59.040 41.667 0.00 0.00 0.00 1.40
2404 6381 3.775316 ACATACTCCCTCTGTCCGAAAAT 59.225 43.478 0.00 0.00 0.00 1.82
2405 6382 3.170717 ACATACTCCCTCTGTCCGAAAA 58.829 45.455 0.00 0.00 0.00 2.29
2406 6383 2.816411 ACATACTCCCTCTGTCCGAAA 58.184 47.619 0.00 0.00 0.00 3.46
2407 6384 2.526888 ACATACTCCCTCTGTCCGAA 57.473 50.000 0.00 0.00 0.00 4.30
2408 6385 2.526888 AACATACTCCCTCTGTCCGA 57.473 50.000 0.00 0.00 0.00 4.55
2409 6386 3.262420 CAAAACATACTCCCTCTGTCCG 58.738 50.000 0.00 0.00 0.00 4.79
2410 6387 3.010420 GCAAAACATACTCCCTCTGTCC 58.990 50.000 0.00 0.00 0.00 4.02
2411 6388 3.944087 AGCAAAACATACTCCCTCTGTC 58.056 45.455 0.00 0.00 0.00 3.51
2412 6389 4.286032 TGTAGCAAAACATACTCCCTCTGT 59.714 41.667 0.00 0.00 0.00 3.41
2413 6390 4.832248 TGTAGCAAAACATACTCCCTCTG 58.168 43.478 0.00 0.00 0.00 3.35
2414 6391 4.532521 ACTGTAGCAAAACATACTCCCTCT 59.467 41.667 0.00 0.00 0.00 3.69
2415 6392 4.833390 ACTGTAGCAAAACATACTCCCTC 58.167 43.478 0.00 0.00 0.00 4.30
2416 6393 4.910458 ACTGTAGCAAAACATACTCCCT 57.090 40.909 0.00 0.00 0.00 4.20
2417 6394 5.484715 TGTACTGTAGCAAAACATACTCCC 58.515 41.667 0.00 0.00 0.00 4.30
2418 6395 7.429636 TTTGTACTGTAGCAAAACATACTCC 57.570 36.000 10.83 0.00 32.46 3.85
2419 6396 9.329913 CATTTTGTACTGTAGCAAAACATACTC 57.670 33.333 20.21 0.00 44.13 2.59
2420 6397 8.846211 ACATTTTGTACTGTAGCAAAACATACT 58.154 29.630 20.21 9.53 44.13 2.12
2421 6398 8.901748 CACATTTTGTACTGTAGCAAAACATAC 58.098 33.333 20.21 0.00 44.13 2.39
2422 6399 8.079203 CCACATTTTGTACTGTAGCAAAACATA 58.921 33.333 20.21 8.02 44.13 2.29
2423 6400 6.922957 CCACATTTTGTACTGTAGCAAAACAT 59.077 34.615 20.21 13.43 44.13 2.71
2424 6401 6.095580 TCCACATTTTGTACTGTAGCAAAACA 59.904 34.615 20.21 3.50 44.13 2.83
2425 6402 6.500041 TCCACATTTTGTACTGTAGCAAAAC 58.500 36.000 20.21 1.30 44.13 2.43
2426 6403 6.701145 TCCACATTTTGTACTGTAGCAAAA 57.299 33.333 20.14 20.14 44.99 2.44
2427 6404 6.294453 CCATCCACATTTTGTACTGTAGCAAA 60.294 38.462 9.79 9.79 33.40 3.68
2428 6405 5.182950 CCATCCACATTTTGTACTGTAGCAA 59.817 40.000 0.00 0.00 0.00 3.91
2429 6406 4.699735 CCATCCACATTTTGTACTGTAGCA 59.300 41.667 0.00 0.00 0.00 3.49
2430 6407 4.096382 CCCATCCACATTTTGTACTGTAGC 59.904 45.833 0.00 0.00 0.00 3.58
2431 6408 5.123820 CACCCATCCACATTTTGTACTGTAG 59.876 44.000 0.00 0.00 0.00 2.74
2432 6409 5.007034 CACCCATCCACATTTTGTACTGTA 58.993 41.667 0.00 0.00 0.00 2.74
2433 6410 3.826157 CACCCATCCACATTTTGTACTGT 59.174 43.478 0.00 0.00 0.00 3.55
2434 6411 3.367292 GCACCCATCCACATTTTGTACTG 60.367 47.826 0.00 0.00 0.00 2.74
2435 6412 2.825532 GCACCCATCCACATTTTGTACT 59.174 45.455 0.00 0.00 0.00 2.73
2436 6413 2.094234 GGCACCCATCCACATTTTGTAC 60.094 50.000 0.00 0.00 0.00 2.90
2437 6414 2.175202 GGCACCCATCCACATTTTGTA 58.825 47.619 0.00 0.00 0.00 2.41
2438 6415 0.975887 GGCACCCATCCACATTTTGT 59.024 50.000 0.00 0.00 0.00 2.83
2439 6416 1.269012 AGGCACCCATCCACATTTTG 58.731 50.000 0.00 0.00 0.00 2.44
2440 6417 1.901833 GAAGGCACCCATCCACATTTT 59.098 47.619 0.00 0.00 0.00 1.82
2441 6418 1.560505 GAAGGCACCCATCCACATTT 58.439 50.000 0.00 0.00 0.00 2.32
2442 6419 0.324645 GGAAGGCACCCATCCACATT 60.325 55.000 0.88 0.00 33.30 2.71
2443 6420 1.307647 GGAAGGCACCCATCCACAT 59.692 57.895 0.88 0.00 33.30 3.21
2444 6421 1.724148 TTGGAAGGCACCCATCCACA 61.724 55.000 7.66 0.00 42.71 4.17
2445 6422 1.076549 TTGGAAGGCACCCATCCAC 59.923 57.895 7.66 0.00 42.71 4.02
2446 6423 1.076549 GTTGGAAGGCACCCATCCA 59.923 57.895 4.21 4.21 41.36 3.41
2447 6424 0.251787 AAGTTGGAAGGCACCCATCC 60.252 55.000 0.00 0.00 33.04 3.51
2448 6425 2.092323 GTAAGTTGGAAGGCACCCATC 58.908 52.381 0.00 0.00 33.04 3.51
2449 6426 1.427368 TGTAAGTTGGAAGGCACCCAT 59.573 47.619 0.00 0.00 33.04 4.00
2450 6427 0.847373 TGTAAGTTGGAAGGCACCCA 59.153 50.000 0.00 0.00 0.00 4.51
2451 6428 1.534729 CTGTAAGTTGGAAGGCACCC 58.465 55.000 0.00 0.00 0.00 4.61
2458 6435 7.441157 GCATATGCTATACACTGTAAGTTGGAA 59.559 37.037 20.64 0.00 41.74 3.53
2459 6436 6.929049 GCATATGCTATACACTGTAAGTTGGA 59.071 38.462 20.64 0.00 41.74 3.53
2460 6437 6.147821 GGCATATGCTATACACTGTAAGTTGG 59.852 42.308 26.12 0.00 43.38 3.77
2461 6438 6.931281 AGGCATATGCTATACACTGTAAGTTG 59.069 38.462 26.12 0.00 43.38 3.16
2462 6439 7.067496 AGGCATATGCTATACACTGTAAGTT 57.933 36.000 26.12 0.00 43.38 2.66
2463 6440 6.672266 AGGCATATGCTATACACTGTAAGT 57.328 37.500 26.12 0.00 45.78 2.24
2464 6441 6.591834 GGAAGGCATATGCTATACACTGTAAG 59.408 42.308 26.12 0.00 41.70 2.34
2465 6442 6.042666 TGGAAGGCATATGCTATACACTGTAA 59.957 38.462 26.12 1.79 41.70 2.41
2466 6443 5.542251 TGGAAGGCATATGCTATACACTGTA 59.458 40.000 26.12 2.83 41.70 2.74
2467 6444 4.347876 TGGAAGGCATATGCTATACACTGT 59.652 41.667 26.12 5.89 41.70 3.55
2468 6445 4.898320 TGGAAGGCATATGCTATACACTG 58.102 43.478 26.12 0.00 41.70 3.66
2469 6446 4.564406 GCTGGAAGGCATATGCTATACACT 60.564 45.833 26.12 11.46 41.70 3.55
2470 6447 3.686726 GCTGGAAGGCATATGCTATACAC 59.313 47.826 26.12 9.30 41.70 2.90
2471 6448 3.942829 GCTGGAAGGCATATGCTATACA 58.057 45.455 26.12 19.65 41.70 2.29
2484 6461 0.610232 CAACAGGAAGGGCTGGAAGG 60.610 60.000 0.00 0.00 0.00 3.46
2485 6462 1.246737 GCAACAGGAAGGGCTGGAAG 61.247 60.000 0.00 0.00 0.00 3.46
2486 6463 1.228552 GCAACAGGAAGGGCTGGAA 60.229 57.895 0.00 0.00 0.00 3.53
2487 6464 2.436109 GCAACAGGAAGGGCTGGA 59.564 61.111 0.00 0.00 0.00 3.86
2488 6465 2.677875 GGCAACAGGAAGGGCTGG 60.678 66.667 0.00 0.00 0.00 4.85
2489 6466 1.676967 GAGGCAACAGGAAGGGCTG 60.677 63.158 0.00 0.00 37.58 4.85
2490 6467 2.759795 GAGGCAACAGGAAGGGCT 59.240 61.111 0.00 0.00 40.45 5.19
2491 6468 2.361737 GGAGGCAACAGGAAGGGC 60.362 66.667 0.00 0.00 41.41 5.19
2492 6469 2.356667 GGGAGGCAACAGGAAGGG 59.643 66.667 0.00 0.00 41.41 3.95
2493 6470 1.867595 ATGGGGAGGCAACAGGAAGG 61.868 60.000 0.00 0.00 41.41 3.46
2494 6471 0.682209 CATGGGGAGGCAACAGGAAG 60.682 60.000 0.00 0.00 41.41 3.46
2495 6472 1.383799 CATGGGGAGGCAACAGGAA 59.616 57.895 0.00 0.00 41.41 3.36
2496 6473 1.434513 AACATGGGGAGGCAACAGGA 61.435 55.000 0.00 0.00 41.41 3.86
2497 6474 0.331278 TAACATGGGGAGGCAACAGG 59.669 55.000 0.00 0.00 41.41 4.00
2498 6475 1.271871 TGTAACATGGGGAGGCAACAG 60.272 52.381 0.00 0.00 41.41 3.16
2499 6476 0.774276 TGTAACATGGGGAGGCAACA 59.226 50.000 0.00 0.00 41.41 3.33
2500 6477 1.004277 TCTGTAACATGGGGAGGCAAC 59.996 52.381 0.00 0.00 0.00 4.17
2501 6478 1.367346 TCTGTAACATGGGGAGGCAA 58.633 50.000 0.00 0.00 0.00 4.52
2502 6479 1.367346 TTCTGTAACATGGGGAGGCA 58.633 50.000 0.00 0.00 0.00 4.75
2503 6480 2.369394 CTTTCTGTAACATGGGGAGGC 58.631 52.381 0.00 0.00 0.00 4.70
2504 6481 2.369394 GCTTTCTGTAACATGGGGAGG 58.631 52.381 0.00 0.00 0.00 4.30
2505 6482 2.369394 GGCTTTCTGTAACATGGGGAG 58.631 52.381 0.00 0.00 0.00 4.30
2506 6483 1.339631 CGGCTTTCTGTAACATGGGGA 60.340 52.381 0.00 0.00 0.00 4.81
2507 6484 1.094785 CGGCTTTCTGTAACATGGGG 58.905 55.000 0.00 0.00 0.00 4.96
2508 6485 1.094785 CCGGCTTTCTGTAACATGGG 58.905 55.000 0.00 0.00 0.00 4.00
2509 6486 0.451783 GCCGGCTTTCTGTAACATGG 59.548 55.000 22.15 0.00 0.00 3.66
2510 6487 0.451783 GGCCGGCTTTCTGTAACATG 59.548 55.000 28.56 0.00 0.00 3.21
2511 6488 0.037590 TGGCCGGCTTTCTGTAACAT 59.962 50.000 28.56 0.00 0.00 2.71
2512 6489 0.605319 CTGGCCGGCTTTCTGTAACA 60.605 55.000 28.56 11.35 0.00 2.41
2513 6490 1.923227 GCTGGCCGGCTTTCTGTAAC 61.923 60.000 30.01 6.48 0.00 2.50
2514 6491 1.674322 GCTGGCCGGCTTTCTGTAA 60.674 57.895 30.01 1.03 0.00 2.41
2515 6492 1.261938 TAGCTGGCCGGCTTTCTGTA 61.262 55.000 42.61 22.36 42.97 2.74
2516 6493 2.592993 TAGCTGGCCGGCTTTCTGT 61.593 57.895 42.61 21.34 42.97 3.41
2517 6494 2.109126 GTAGCTGGCCGGCTTTCTG 61.109 63.158 42.61 14.78 42.97 3.02
2518 6495 2.245438 GAGTAGCTGGCCGGCTTTCT 62.245 60.000 42.61 35.72 42.97 2.52
2519 6496 1.815840 GAGTAGCTGGCCGGCTTTC 60.816 63.158 42.61 32.87 42.97 2.62
2520 6497 2.269241 GAGTAGCTGGCCGGCTTT 59.731 61.111 42.61 30.35 42.97 3.51
2521 6498 2.685380 AGAGTAGCTGGCCGGCTT 60.685 61.111 42.61 27.44 42.97 4.35
2522 6499 3.465403 CAGAGTAGCTGGCCGGCT 61.465 66.667 39.75 39.75 45.29 5.52
2523 6500 3.461773 TCAGAGTAGCTGGCCGGC 61.462 66.667 30.15 30.15 44.98 6.13
2524 6501 2.496817 GTCAGAGTAGCTGGCCGG 59.503 66.667 7.41 7.41 43.52 6.13
2528 6505 0.901124 AAGGCTGTCAGAGTAGCTGG 59.099 55.000 3.32 0.00 44.98 4.85
2529 6506 2.344950 CAAAGGCTGTCAGAGTAGCTG 58.655 52.381 3.32 0.00 46.31 4.24
2530 6507 1.338579 GCAAAGGCTGTCAGAGTAGCT 60.339 52.381 3.32 0.00 39.80 3.32
2531 6508 1.082690 GCAAAGGCTGTCAGAGTAGC 58.917 55.000 3.32 0.00 39.17 3.58
2532 6509 2.462456 TGCAAAGGCTGTCAGAGTAG 57.538 50.000 3.32 0.00 41.91 2.57
2533 6510 3.769300 TCTATGCAAAGGCTGTCAGAGTA 59.231 43.478 3.32 0.00 41.91 2.59
2534 6511 2.568956 TCTATGCAAAGGCTGTCAGAGT 59.431 45.455 3.32 0.00 41.91 3.24
2535 6512 2.935201 GTCTATGCAAAGGCTGTCAGAG 59.065 50.000 3.32 0.00 41.91 3.35
2536 6513 2.302733 TGTCTATGCAAAGGCTGTCAGA 59.697 45.455 3.32 0.00 41.91 3.27
2537 6514 2.417933 GTGTCTATGCAAAGGCTGTCAG 59.582 50.000 0.00 0.00 41.91 3.51
2538 6515 2.426522 GTGTCTATGCAAAGGCTGTCA 58.573 47.619 0.00 0.00 41.91 3.58
2539 6516 1.740025 GGTGTCTATGCAAAGGCTGTC 59.260 52.381 0.00 0.00 41.91 3.51
2540 6517 1.073763 TGGTGTCTATGCAAAGGCTGT 59.926 47.619 0.00 0.00 41.91 4.40
2541 6518 1.825090 TGGTGTCTATGCAAAGGCTG 58.175 50.000 0.00 0.00 41.91 4.85
2542 6519 2.040278 TCTTGGTGTCTATGCAAAGGCT 59.960 45.455 0.00 0.00 41.91 4.58
2543 6520 2.436417 TCTTGGTGTCTATGCAAAGGC 58.564 47.619 0.00 0.00 41.68 4.35
2544 6521 5.047802 ACAATTCTTGGTGTCTATGCAAAGG 60.048 40.000 0.00 0.00 34.12 3.11
2545 6522 6.017400 ACAATTCTTGGTGTCTATGCAAAG 57.983 37.500 0.00 0.00 34.12 2.77
2546 6523 5.534278 TGACAATTCTTGGTGTCTATGCAAA 59.466 36.000 0.00 0.00 43.73 3.68
2547 6524 5.069318 TGACAATTCTTGGTGTCTATGCAA 58.931 37.500 0.00 0.00 43.73 4.08
2548 6525 4.650734 TGACAATTCTTGGTGTCTATGCA 58.349 39.130 5.49 0.00 43.73 3.96
2549 6526 5.627499 TTGACAATTCTTGGTGTCTATGC 57.373 39.130 5.49 0.00 43.73 3.14
2550 6527 5.181811 TGCTTGACAATTCTTGGTGTCTATG 59.818 40.000 5.49 0.00 43.73 2.23
2551 6528 5.316167 TGCTTGACAATTCTTGGTGTCTAT 58.684 37.500 5.49 0.00 43.73 1.98
2552 6529 4.713553 TGCTTGACAATTCTTGGTGTCTA 58.286 39.130 5.49 0.00 43.73 2.59
2553 6530 3.554934 TGCTTGACAATTCTTGGTGTCT 58.445 40.909 5.49 0.00 43.73 3.41
2554 6531 3.988379 TGCTTGACAATTCTTGGTGTC 57.012 42.857 0.00 0.00 43.66 3.67
2555 6532 3.890756 TCATGCTTGACAATTCTTGGTGT 59.109 39.130 0.00 0.00 34.12 4.16
2556 6533 4.508461 TCATGCTTGACAATTCTTGGTG 57.492 40.909 0.00 0.00 34.12 4.17
2557 6534 5.534207 TTTCATGCTTGACAATTCTTGGT 57.466 34.783 1.02 0.00 34.12 3.67
2558 6535 6.128391 CCATTTTCATGCTTGACAATTCTTGG 60.128 38.462 10.38 7.53 31.44 3.61
2559 6536 6.619874 GCCATTTTCATGCTTGACAATTCTTG 60.620 38.462 10.38 3.10 31.44 3.02
2560 6537 5.410439 GCCATTTTCATGCTTGACAATTCTT 59.590 36.000 10.38 0.00 31.44 2.52
2561 6538 4.933400 GCCATTTTCATGCTTGACAATTCT 59.067 37.500 10.38 0.00 31.44 2.40
2562 6539 4.201647 CGCCATTTTCATGCTTGACAATTC 60.202 41.667 10.38 6.06 31.44 2.17
2563 6540 3.680937 CGCCATTTTCATGCTTGACAATT 59.319 39.130 10.38 0.86 31.44 2.32
2564 6541 3.056678 TCGCCATTTTCATGCTTGACAAT 60.057 39.130 7.88 7.88 33.53 2.71
2565 6542 2.295629 TCGCCATTTTCATGCTTGACAA 59.704 40.909 1.02 2.65 0.00 3.18
2566 6543 1.885233 TCGCCATTTTCATGCTTGACA 59.115 42.857 1.02 0.00 0.00 3.58
2567 6544 2.634982 TCGCCATTTTCATGCTTGAC 57.365 45.000 1.02 0.00 0.00 3.18
2568 6545 2.492881 ACATCGCCATTTTCATGCTTGA 59.507 40.909 0.00 0.00 0.00 3.02
2569 6546 2.883574 ACATCGCCATTTTCATGCTTG 58.116 42.857 0.00 0.00 0.00 4.01
2570 6547 3.255725 CAACATCGCCATTTTCATGCTT 58.744 40.909 0.00 0.00 0.00 3.91
2571 6548 2.883574 CAACATCGCCATTTTCATGCT 58.116 42.857 0.00 0.00 0.00 3.79
2572 6549 1.325338 GCAACATCGCCATTTTCATGC 59.675 47.619 0.00 0.00 0.00 4.06
2573 6550 2.608268 TGCAACATCGCCATTTTCATG 58.392 42.857 0.00 0.00 0.00 3.07
2574 6551 3.530265 ATGCAACATCGCCATTTTCAT 57.470 38.095 0.00 0.00 0.00 2.57
2575 6552 3.192212 TGTATGCAACATCGCCATTTTCA 59.808 39.130 0.00 0.00 31.43 2.69
2576 6553 3.768406 TGTATGCAACATCGCCATTTTC 58.232 40.909 0.00 0.00 31.43 2.29
2577 6554 3.865011 TGTATGCAACATCGCCATTTT 57.135 38.095 0.00 0.00 31.43 1.82
2590 6567 9.800433 CCATAAAAATACAGACAAATGTATGCA 57.200 29.630 8.01 0.00 43.85 3.96
2595 6572 8.788806 TCGTTCCATAAAAATACAGACAAATGT 58.211 29.630 0.00 0.00 37.19 2.71
2596 6573 9.619316 TTCGTTCCATAAAAATACAGACAAATG 57.381 29.630 0.00 0.00 0.00 2.32
2597 6574 9.840427 CTTCGTTCCATAAAAATACAGACAAAT 57.160 29.630 0.00 0.00 0.00 2.32
2598 6575 9.058174 TCTTCGTTCCATAAAAATACAGACAAA 57.942 29.630 0.00 0.00 0.00 2.83
2599 6576 8.610248 TCTTCGTTCCATAAAAATACAGACAA 57.390 30.769 0.00 0.00 0.00 3.18
2600 6577 8.092068 TCTCTTCGTTCCATAAAAATACAGACA 58.908 33.333 0.00 0.00 0.00 3.41
2601 6578 8.381387 GTCTCTTCGTTCCATAAAAATACAGAC 58.619 37.037 0.00 0.00 0.00 3.51
2602 6579 8.311836 AGTCTCTTCGTTCCATAAAAATACAGA 58.688 33.333 0.00 0.00 0.00 3.41
2603 6580 8.480643 AGTCTCTTCGTTCCATAAAAATACAG 57.519 34.615 0.00 0.00 0.00 2.74
2604 6581 8.842358 AAGTCTCTTCGTTCCATAAAAATACA 57.158 30.769 0.00 0.00 0.00 2.29
2609 6586 9.720769 AGAAATAAGTCTCTTCGTTCCATAAAA 57.279 29.630 0.00 0.00 0.00 1.52
2610 6587 9.720769 AAGAAATAAGTCTCTTCGTTCCATAAA 57.279 29.630 0.00 0.00 0.00 1.40
2611 6588 9.151471 CAAGAAATAAGTCTCTTCGTTCCATAA 57.849 33.333 0.00 0.00 29.29 1.90
2612 6589 8.528643 TCAAGAAATAAGTCTCTTCGTTCCATA 58.471 33.333 0.00 0.00 29.29 2.74
2613 6590 7.386851 TCAAGAAATAAGTCTCTTCGTTCCAT 58.613 34.615 0.00 0.00 29.29 3.41
2614 6591 6.755206 TCAAGAAATAAGTCTCTTCGTTCCA 58.245 36.000 0.00 0.00 29.29 3.53
2615 6592 7.835634 ATCAAGAAATAAGTCTCTTCGTTCC 57.164 36.000 0.00 0.00 29.29 3.62
2616 6593 8.926710 TCAATCAAGAAATAAGTCTCTTCGTTC 58.073 33.333 0.00 0.00 29.29 3.95
2617 6594 8.833231 TCAATCAAGAAATAAGTCTCTTCGTT 57.167 30.769 0.00 0.00 29.29 3.85
2618 6595 8.877779 CATCAATCAAGAAATAAGTCTCTTCGT 58.122 33.333 0.00 0.00 29.29 3.85
2619 6596 7.850003 GCATCAATCAAGAAATAAGTCTCTTCG 59.150 37.037 0.00 0.00 29.29 3.79
2620 6597 8.891720 AGCATCAATCAAGAAATAAGTCTCTTC 58.108 33.333 0.00 0.00 29.29 2.87
2621 6598 8.675504 CAGCATCAATCAAGAAATAAGTCTCTT 58.324 33.333 0.00 0.00 31.99 2.85
2622 6599 7.282675 CCAGCATCAATCAAGAAATAAGTCTCT 59.717 37.037 0.00 0.00 0.00 3.10
2623 6600 7.281774 TCCAGCATCAATCAAGAAATAAGTCTC 59.718 37.037 0.00 0.00 0.00 3.36
2624 6601 7.114754 TCCAGCATCAATCAAGAAATAAGTCT 58.885 34.615 0.00 0.00 0.00 3.24
2625 6602 7.325660 TCCAGCATCAATCAAGAAATAAGTC 57.674 36.000 0.00 0.00 0.00 3.01
2626 6603 7.707624 TTCCAGCATCAATCAAGAAATAAGT 57.292 32.000 0.00 0.00 0.00 2.24
2627 6604 8.991243 TTTTCCAGCATCAATCAAGAAATAAG 57.009 30.769 0.00 0.00 0.00 1.73
2628 6605 9.426837 CTTTTTCCAGCATCAATCAAGAAATAA 57.573 29.630 0.00 0.00 0.00 1.40
2629 6606 8.036575 CCTTTTTCCAGCATCAATCAAGAAATA 58.963 33.333 0.00 0.00 0.00 1.40
2630 6607 6.877322 CCTTTTTCCAGCATCAATCAAGAAAT 59.123 34.615 0.00 0.00 0.00 2.17
2631 6608 6.041865 TCCTTTTTCCAGCATCAATCAAGAAA 59.958 34.615 0.00 0.00 0.00 2.52
2632 6609 5.539574 TCCTTTTTCCAGCATCAATCAAGAA 59.460 36.000 0.00 0.00 0.00 2.52
2633 6610 5.078949 TCCTTTTTCCAGCATCAATCAAGA 58.921 37.500 0.00 0.00 0.00 3.02
2634 6611 5.395682 TCCTTTTTCCAGCATCAATCAAG 57.604 39.130 0.00 0.00 0.00 3.02
2635 6612 5.804944 TTCCTTTTTCCAGCATCAATCAA 57.195 34.783 0.00 0.00 0.00 2.57
2636 6613 5.804944 TTTCCTTTTTCCAGCATCAATCA 57.195 34.783 0.00 0.00 0.00 2.57
2637 6614 7.524065 CAAATTTCCTTTTTCCAGCATCAATC 58.476 34.615 0.00 0.00 0.00 2.67
2638 6615 6.072342 GCAAATTTCCTTTTTCCAGCATCAAT 60.072 34.615 0.00 0.00 0.00 2.57
2639 6616 5.239087 GCAAATTTCCTTTTTCCAGCATCAA 59.761 36.000 0.00 0.00 0.00 2.57
2640 6617 4.756135 GCAAATTTCCTTTTTCCAGCATCA 59.244 37.500 0.00 0.00 0.00 3.07
2641 6618 4.999311 AGCAAATTTCCTTTTTCCAGCATC 59.001 37.500 0.00 0.00 0.00 3.91
2642 6619 4.976864 AGCAAATTTCCTTTTTCCAGCAT 58.023 34.783 0.00 0.00 0.00 3.79
2643 6620 4.420522 AGCAAATTTCCTTTTTCCAGCA 57.579 36.364 0.00 0.00 0.00 4.41
2644 6621 5.541845 AGTAGCAAATTTCCTTTTTCCAGC 58.458 37.500 0.00 0.00 0.00 4.85
2645 6622 6.646653 GGAAGTAGCAAATTTCCTTTTTCCAG 59.353 38.462 14.72 0.00 37.86 3.86
2646 6623 6.098982 TGGAAGTAGCAAATTTCCTTTTTCCA 59.901 34.615 16.91 16.91 40.77 3.53
2647 6624 6.521162 TGGAAGTAGCAAATTTCCTTTTTCC 58.479 36.000 13.51 13.51 40.77 3.13
2648 6625 8.607441 AATGGAAGTAGCAAATTTCCTTTTTC 57.393 30.769 12.53 0.00 40.77 2.29
2659 6636 9.284968 GGCTCTATTAATAATGGAAGTAGCAAA 57.715 33.333 9.33 0.00 0.00 3.68
2660 6637 8.436778 TGGCTCTATTAATAATGGAAGTAGCAA 58.563 33.333 9.33 0.00 0.00 3.91
2661 6638 7.878127 GTGGCTCTATTAATAATGGAAGTAGCA 59.122 37.037 9.33 0.00 0.00 3.49
2662 6639 7.878127 TGTGGCTCTATTAATAATGGAAGTAGC 59.122 37.037 0.89 1.25 0.00 3.58
2663 6640 9.778741 TTGTGGCTCTATTAATAATGGAAGTAG 57.221 33.333 0.89 0.00 0.00 2.57
2665 6642 9.125026 CTTTGTGGCTCTATTAATAATGGAAGT 57.875 33.333 0.89 0.00 0.00 3.01
2666 6643 8.571336 CCTTTGTGGCTCTATTAATAATGGAAG 58.429 37.037 0.89 0.00 0.00 3.46
2667 6644 8.278639 TCCTTTGTGGCTCTATTAATAATGGAA 58.721 33.333 0.89 0.00 35.26 3.53
2668 6645 7.811282 TCCTTTGTGGCTCTATTAATAATGGA 58.189 34.615 0.00 0.00 35.26 3.41
2669 6646 8.463930 TTCCTTTGTGGCTCTATTAATAATGG 57.536 34.615 0.00 0.00 35.26 3.16
2670 6647 9.125026 ACTTCCTTTGTGGCTCTATTAATAATG 57.875 33.333 0.00 0.00 35.26 1.90
2671 6648 9.700831 AACTTCCTTTGTGGCTCTATTAATAAT 57.299 29.630 0.00 0.00 35.26 1.28
2672 6649 8.956426 CAACTTCCTTTGTGGCTCTATTAATAA 58.044 33.333 0.00 0.00 35.26 1.40
2673 6650 7.556275 CCAACTTCCTTTGTGGCTCTATTAATA 59.444 37.037 0.00 0.00 35.26 0.98
2674 6651 6.378280 CCAACTTCCTTTGTGGCTCTATTAAT 59.622 38.462 0.00 0.00 35.26 1.40
2675 6652 5.710099 CCAACTTCCTTTGTGGCTCTATTAA 59.290 40.000 0.00 0.00 35.26 1.40
2676 6653 5.253330 CCAACTTCCTTTGTGGCTCTATTA 58.747 41.667 0.00 0.00 35.26 0.98
2677 6654 4.082125 CCAACTTCCTTTGTGGCTCTATT 58.918 43.478 0.00 0.00 35.26 1.73
2678 6655 3.562176 CCCAACTTCCTTTGTGGCTCTAT 60.562 47.826 0.00 0.00 35.26 1.98
2679 6656 2.224769 CCCAACTTCCTTTGTGGCTCTA 60.225 50.000 0.00 0.00 35.26 2.43
2680 6657 1.479389 CCCAACTTCCTTTGTGGCTCT 60.479 52.381 0.00 0.00 35.26 4.09
2681 6658 0.961753 CCCAACTTCCTTTGTGGCTC 59.038 55.000 0.00 0.00 35.26 4.70
2682 6659 1.115326 GCCCAACTTCCTTTGTGGCT 61.115 55.000 0.00 0.00 38.65 4.75
2683 6660 1.367471 GCCCAACTTCCTTTGTGGC 59.633 57.895 0.00 0.00 36.38 5.01
2684 6661 1.273327 GATGCCCAACTTCCTTTGTGG 59.727 52.381 0.00 0.00 37.10 4.17
2685 6662 2.242043 AGATGCCCAACTTCCTTTGTG 58.758 47.619 0.00 0.00 0.00 3.33
2686 6663 2.683211 AGATGCCCAACTTCCTTTGT 57.317 45.000 0.00 0.00 0.00 2.83
2687 6664 3.690460 ACTAGATGCCCAACTTCCTTTG 58.310 45.455 0.00 0.00 0.00 2.77
2688 6665 4.336280 GAACTAGATGCCCAACTTCCTTT 58.664 43.478 0.00 0.00 0.00 3.11
2689 6666 3.619979 CGAACTAGATGCCCAACTTCCTT 60.620 47.826 0.00 0.00 0.00 3.36
2690 6667 2.093447 CGAACTAGATGCCCAACTTCCT 60.093 50.000 0.00 0.00 0.00 3.36
2691 6668 2.280628 CGAACTAGATGCCCAACTTCC 58.719 52.381 0.00 0.00 0.00 3.46
2692 6669 1.666189 GCGAACTAGATGCCCAACTTC 59.334 52.381 0.00 0.00 0.00 3.01
2693 6670 1.003118 TGCGAACTAGATGCCCAACTT 59.997 47.619 0.00 0.00 0.00 2.66
2694 6671 0.613260 TGCGAACTAGATGCCCAACT 59.387 50.000 0.00 0.00 0.00 3.16
2695 6672 1.009829 CTGCGAACTAGATGCCCAAC 58.990 55.000 0.00 0.00 0.00 3.77
2696 6673 0.901827 TCTGCGAACTAGATGCCCAA 59.098 50.000 0.00 0.00 0.00 4.12
2697 6674 0.901827 TTCTGCGAACTAGATGCCCA 59.098 50.000 0.00 0.00 0.00 5.36
2698 6675 2.246719 ATTCTGCGAACTAGATGCCC 57.753 50.000 0.00 0.00 0.00 5.36
2699 6676 3.247173 CAGAATTCTGCGAACTAGATGCC 59.753 47.826 21.96 0.00 37.15 4.40
2700 6677 4.115516 TCAGAATTCTGCGAACTAGATGC 58.884 43.478 27.45 0.00 43.46 3.91
2701 6678 6.653273 TTTCAGAATTCTGCGAACTAGATG 57.347 37.500 27.45 3.81 43.46 2.90
2702 6679 6.650807 TGTTTTCAGAATTCTGCGAACTAGAT 59.349 34.615 31.34 3.46 43.46 1.98
2703 6680 5.989168 TGTTTTCAGAATTCTGCGAACTAGA 59.011 36.000 31.34 20.31 43.46 2.43
2704 6681 6.228273 TGTTTTCAGAATTCTGCGAACTAG 57.772 37.500 31.34 13.70 43.46 2.57
2705 6682 6.801539 ATGTTTTCAGAATTCTGCGAACTA 57.198 33.333 31.34 24.19 43.46 2.24
2706 6683 5.695851 ATGTTTTCAGAATTCTGCGAACT 57.304 34.783 31.34 22.39 43.46 3.01
2707 6684 6.024049 CCTATGTTTTCAGAATTCTGCGAAC 58.976 40.000 28.43 28.43 43.46 3.95
2708 6685 5.937540 TCCTATGTTTTCAGAATTCTGCGAA 59.062 36.000 27.45 20.87 43.46 4.70
2709 6686 5.487433 TCCTATGTTTTCAGAATTCTGCGA 58.513 37.500 27.45 16.76 43.46 5.10
2710 6687 5.801350 TCCTATGTTTTCAGAATTCTGCG 57.199 39.130 27.45 8.42 43.46 5.18
2711 6688 7.490402 CCAATTCCTATGTTTTCAGAATTCTGC 59.510 37.037 27.45 15.47 43.46 4.26
2712 6689 7.977853 CCCAATTCCTATGTTTTCAGAATTCTG 59.022 37.037 26.56 26.56 45.08 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.