Multiple sequence alignment - TraesCS3A01G483200
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3A01G483200 | chr3A | 100.000 | 4942 | 0 | 0 | 1 | 4942 | 713634028 | 713629087 | 0.000000e+00 | 9127.0 |
1 | TraesCS3A01G483200 | chr3A | 88.512 | 383 | 34 | 9 | 3149 | 3524 | 713556591 | 713556212 | 5.830000e-124 | 455.0 |
2 | TraesCS3A01G483200 | chr3A | 82.667 | 450 | 48 | 3 | 2555 | 2975 | 713556987 | 713556539 | 6.040000e-99 | 372.0 |
3 | TraesCS3A01G483200 | chr3A | 81.461 | 356 | 55 | 9 | 3603 | 3949 | 713556088 | 713555735 | 1.050000e-71 | 281.0 |
4 | TraesCS3A01G483200 | chr3A | 74.925 | 335 | 53 | 13 | 2590 | 2896 | 713836190 | 713835859 | 1.870000e-24 | 124.0 |
5 | TraesCS3A01G483200 | chr3D | 94.528 | 2248 | 91 | 17 | 900 | 3145 | 578066642 | 578064425 | 0.000000e+00 | 3441.0 |
6 | TraesCS3A01G483200 | chr3D | 88.263 | 1704 | 123 | 29 | 3253 | 4940 | 577885525 | 577887167 | 0.000000e+00 | 1967.0 |
7 | TraesCS3A01G483200 | chr3D | 97.645 | 1104 | 25 | 1 | 861 | 1963 | 577881610 | 577882713 | 0.000000e+00 | 1893.0 |
8 | TraesCS3A01G483200 | chr3D | 88.244 | 1327 | 128 | 13 | 3149 | 4461 | 578064621 | 578063309 | 0.000000e+00 | 1561.0 |
9 | TraesCS3A01G483200 | chr3D | 93.118 | 712 | 45 | 4 | 1961 | 2671 | 577884404 | 577885112 | 0.000000e+00 | 1040.0 |
10 | TraesCS3A01G483200 | chr3D | 88.462 | 676 | 68 | 7 | 907 | 1581 | 577870695 | 577871361 | 0.000000e+00 | 808.0 |
11 | TraesCS3A01G483200 | chr3D | 97.159 | 352 | 9 | 1 | 1 | 351 | 577880970 | 577881321 | 1.180000e-165 | 593.0 |
12 | TraesCS3A01G483200 | chr3D | 88.017 | 459 | 55 | 0 | 1460 | 1918 | 577828419 | 577827961 | 1.210000e-150 | 544.0 |
13 | TraesCS3A01G483200 | chr3D | 95.513 | 312 | 14 | 0 | 2661 | 2972 | 577885186 | 577885497 | 2.660000e-137 | 499.0 |
14 | TraesCS3A01G483200 | chr3D | 96.233 | 292 | 10 | 1 | 581 | 871 | 577881294 | 577881585 | 1.240000e-130 | 477.0 |
15 | TraesCS3A01G483200 | chr3D | 82.322 | 577 | 56 | 17 | 2442 | 2975 | 577827895 | 577827322 | 4.510000e-125 | 459.0 |
16 | TraesCS3A01G483200 | chr3D | 85.204 | 392 | 36 | 15 | 3152 | 3524 | 577827371 | 577826983 | 2.790000e-102 | 383.0 |
17 | TraesCS3A01G483200 | chr3D | 76.812 | 759 | 110 | 32 | 3603 | 4337 | 577826861 | 577826145 | 2.810000e-97 | 366.0 |
18 | TraesCS3A01G483200 | chr3D | 81.062 | 433 | 56 | 14 | 2563 | 2972 | 577904389 | 577904818 | 6.170000e-84 | 322.0 |
19 | TraesCS3A01G483200 | chr3D | 82.682 | 358 | 62 | 0 | 3603 | 3960 | 578158033 | 578157676 | 7.980000e-83 | 318.0 |
20 | TraesCS3A01G483200 | chr3D | 75.422 | 415 | 92 | 10 | 1519 | 1928 | 577861092 | 577861501 | 5.050000e-45 | 193.0 |
21 | TraesCS3A01G483200 | chr3D | 75.060 | 417 | 97 | 7 | 1522 | 1934 | 578106814 | 578106401 | 2.350000e-43 | 187.0 |
22 | TraesCS3A01G483200 | chr3D | 89.313 | 131 | 13 | 1 | 699 | 828 | 577870354 | 577870484 | 3.960000e-36 | 163.0 |
23 | TraesCS3A01G483200 | chr3D | 89.313 | 131 | 7 | 4 | 4542 | 4668 | 578063216 | 578063089 | 1.840000e-34 | 158.0 |
24 | TraesCS3A01G483200 | chr3D | 76.106 | 339 | 52 | 12 | 2585 | 2896 | 578213026 | 578212690 | 3.080000e-32 | 150.0 |
25 | TraesCS3A01G483200 | chr3D | 93.478 | 92 | 6 | 0 | 3054 | 3145 | 577885525 | 577885616 | 2.400000e-28 | 137.0 |
26 | TraesCS3A01G483200 | chr3D | 80.142 | 141 | 28 | 0 | 1756 | 1896 | 578144466 | 578144326 | 6.770000e-19 | 106.0 |
27 | TraesCS3A01G483200 | chr3B | 94.300 | 2263 | 94 | 6 | 872 | 3131 | 771326761 | 771324531 | 0.000000e+00 | 3432.0 |
28 | TraesCS3A01G483200 | chr3B | 87.215 | 1142 | 98 | 22 | 3149 | 4282 | 771324712 | 771323611 | 0.000000e+00 | 1256.0 |
29 | TraesCS3A01G483200 | chr3B | 88.462 | 546 | 54 | 5 | 907 | 1447 | 771344838 | 771344297 | 0.000000e+00 | 651.0 |
30 | TraesCS3A01G483200 | chr3B | 86.264 | 364 | 39 | 8 | 3171 | 3524 | 771127121 | 771127483 | 7.760000e-103 | 385.0 |
31 | TraesCS3A01G483200 | chr3B | 88.379 | 327 | 29 | 8 | 67 | 388 | 771327897 | 771327575 | 7.760000e-103 | 385.0 |
32 | TraesCS3A01G483200 | chr3B | 81.579 | 418 | 47 | 3 | 2587 | 2975 | 770988427 | 770988011 | 7.980000e-83 | 318.0 |
33 | TraesCS3A01G483200 | chr3B | 81.322 | 348 | 61 | 4 | 3603 | 3949 | 771127613 | 771127957 | 3.770000e-71 | 279.0 |
34 | TraesCS3A01G483200 | chr3B | 85.417 | 192 | 25 | 1 | 1747 | 1935 | 771390085 | 771389894 | 3.900000e-46 | 196.0 |
35 | TraesCS3A01G483200 | chr3B | 93.204 | 103 | 5 | 2 | 558 | 658 | 771327573 | 771327471 | 3.080000e-32 | 150.0 |
36 | TraesCS3A01G483200 | chr3B | 88.235 | 119 | 9 | 5 | 4542 | 4658 | 771323283 | 771323168 | 2.400000e-28 | 137.0 |
37 | TraesCS3A01G483200 | chr3B | 90.000 | 100 | 10 | 0 | 3149 | 3248 | 771007525 | 771007426 | 4.010000e-26 | 130.0 |
38 | TraesCS3A01G483200 | chr3B | 89.320 | 103 | 8 | 2 | 1485 | 1587 | 771344295 | 771344196 | 5.190000e-25 | 126.0 |
39 | TraesCS3A01G483200 | chr3B | 80.723 | 166 | 29 | 2 | 2571 | 2734 | 771514328 | 771514164 | 5.190000e-25 | 126.0 |
40 | TraesCS3A01G483200 | chr3B | 77.720 | 193 | 39 | 2 | 1756 | 1944 | 771402003 | 771401811 | 1.120000e-21 | 115.0 |
41 | TraesCS3A01G483200 | chr3B | 83.051 | 118 | 17 | 3 | 207 | 323 | 771345166 | 771345051 | 2.430000e-18 | 104.0 |
42 | TraesCS3A01G483200 | chr7D | 79.387 | 359 | 60 | 12 | 3603 | 3960 | 593647435 | 593647780 | 1.780000e-59 | 241.0 |
43 | TraesCS3A01G483200 | chr7D | 86.243 | 189 | 24 | 2 | 3342 | 3529 | 593647138 | 593647325 | 2.330000e-48 | 204.0 |
44 | TraesCS3A01G483200 | chr5A | 93.252 | 163 | 11 | 0 | 391 | 553 | 706667781 | 706667943 | 1.780000e-59 | 241.0 |
45 | TraesCS3A01G483200 | chr6A | 91.765 | 170 | 14 | 0 | 386 | 555 | 583002612 | 583002781 | 2.300000e-58 | 237.0 |
46 | TraesCS3A01G483200 | chr4A | 93.168 | 161 | 8 | 3 | 395 | 553 | 18660386 | 18660545 | 2.970000e-57 | 233.0 |
47 | TraesCS3A01G483200 | chrUn | 91.566 | 166 | 12 | 2 | 391 | 554 | 360088981 | 360089146 | 1.380000e-55 | 228.0 |
48 | TraesCS3A01G483200 | chrUn | 91.566 | 166 | 12 | 2 | 391 | 554 | 416058033 | 416058198 | 1.380000e-55 | 228.0 |
49 | TraesCS3A01G483200 | chr7A | 92.025 | 163 | 12 | 1 | 394 | 555 | 672652159 | 672651997 | 1.380000e-55 | 228.0 |
50 | TraesCS3A01G483200 | chr7A | 91.411 | 163 | 13 | 1 | 392 | 553 | 65522750 | 65522912 | 6.440000e-54 | 222.0 |
51 | TraesCS3A01G483200 | chr7A | 81.507 | 146 | 23 | 3 | 4701 | 4845 | 639414705 | 639414847 | 3.130000e-22 | 117.0 |
52 | TraesCS3A01G483200 | chr7A | 77.714 | 175 | 25 | 14 | 4683 | 4850 | 35958854 | 35959021 | 1.460000e-15 | 95.3 |
53 | TraesCS3A01G483200 | chr5B | 90.173 | 173 | 17 | 0 | 384 | 556 | 686710397 | 686710569 | 4.980000e-55 | 226.0 |
54 | TraesCS3A01G483200 | chr5B | 89.595 | 173 | 18 | 0 | 384 | 556 | 686830746 | 686830918 | 2.320000e-53 | 220.0 |
55 | TraesCS3A01G483200 | chr7B | 84.753 | 223 | 30 | 4 | 3712 | 3932 | 667374470 | 667374250 | 2.320000e-53 | 220.0 |
56 | TraesCS3A01G483200 | chr2B | 81.283 | 187 | 28 | 5 | 4661 | 4846 | 198947188 | 198947008 | 1.430000e-30 | 145.0 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3A01G483200 | chr3A | 713629087 | 713634028 | 4941 | True | 9127.000000 | 9127 | 100.000000 | 1 | 4942 | 1 | chr3A.!!$R1 | 4941 |
1 | TraesCS3A01G483200 | chr3A | 713555735 | 713556987 | 1252 | True | 369.333333 | 455 | 84.213333 | 2555 | 3949 | 3 | chr3A.!!$R3 | 1394 |
2 | TraesCS3A01G483200 | chr3D | 578063089 | 578066642 | 3553 | True | 1720.000000 | 3441 | 90.695000 | 900 | 4668 | 3 | chr3D.!!$R6 | 3768 |
3 | TraesCS3A01G483200 | chr3D | 577880970 | 577887167 | 6197 | False | 943.714286 | 1967 | 94.487000 | 1 | 4940 | 7 | chr3D.!!$F4 | 4939 |
4 | TraesCS3A01G483200 | chr3D | 577870354 | 577871361 | 1007 | False | 485.500000 | 808 | 88.887500 | 699 | 1581 | 2 | chr3D.!!$F3 | 882 |
5 | TraesCS3A01G483200 | chr3D | 577826145 | 577828419 | 2274 | True | 438.000000 | 544 | 83.088750 | 1460 | 4337 | 4 | chr3D.!!$R5 | 2877 |
6 | TraesCS3A01G483200 | chr3B | 771323168 | 771327897 | 4729 | True | 1072.000000 | 3432 | 90.266600 | 67 | 4658 | 5 | chr3B.!!$R6 | 4591 |
7 | TraesCS3A01G483200 | chr3B | 771127121 | 771127957 | 836 | False | 332.000000 | 385 | 83.793000 | 3171 | 3949 | 2 | chr3B.!!$F1 | 778 |
8 | TraesCS3A01G483200 | chr3B | 771344196 | 771345166 | 970 | True | 293.666667 | 651 | 86.944333 | 207 | 1587 | 3 | chr3B.!!$R7 | 1380 |
9 | TraesCS3A01G483200 | chr7D | 593647138 | 593647780 | 642 | False | 222.500000 | 241 | 82.815000 | 3342 | 3960 | 2 | chr7D.!!$F1 | 618 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
447 | 568 | 0.109342 | CGGGCCTCCAAATCAGCTAT | 59.891 | 55.000 | 0.84 | 0.0 | 0.00 | 2.97 | F |
464 | 585 | 0.249996 | TATAACGGGCTAAAGCGGGC | 60.250 | 55.000 | 0.00 | 0.0 | 43.26 | 6.13 | F |
502 | 623 | 0.476338 | TTTAGTGGCACCCTGCTGAA | 59.524 | 50.000 | 15.27 | 0.0 | 44.28 | 3.02 | F |
503 | 624 | 0.476338 | TTAGTGGCACCCTGCTGAAA | 59.524 | 50.000 | 15.27 | 0.0 | 44.28 | 2.69 | F |
504 | 625 | 0.476338 | TAGTGGCACCCTGCTGAAAA | 59.524 | 50.000 | 15.27 | 0.0 | 44.28 | 2.29 | F |
509 | 630 | 0.609131 | GCACCCTGCTGAAAAGGCTA | 60.609 | 55.000 | 0.00 | 0.0 | 40.96 | 3.93 | F |
2966 | 5466 | 1.005394 | ACGTCCTTAACAGCCCGTG | 60.005 | 57.895 | 0.00 | 0.0 | 0.00 | 4.94 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2226 | 4594 | 0.820226 | CTCAGGTTCGGATCTCAGCA | 59.180 | 55.000 | 0.00 | 0.0 | 0.00 | 4.41 | R |
2376 | 4744 | 7.443879 | ACCTTAAAACCATCAAAATTTGCGAAT | 59.556 | 29.630 | 0.00 | 0.0 | 0.00 | 3.34 | R |
2514 | 4883 | 9.722056 | CTTCAACTGATAAGGCAACAATAATAC | 57.278 | 33.333 | 0.00 | 0.0 | 41.41 | 1.89 | R |
2896 | 5396 | 1.021390 | GTGTCATCCCTGCTGTTCCG | 61.021 | 60.000 | 0.00 | 0.0 | 0.00 | 4.30 | R |
2971 | 5471 | 1.001633 | TGGGCTGTTAAGGACGTCTTC | 59.998 | 52.381 | 16.46 | 0.0 | 36.93 | 2.87 | R |
2975 | 5475 | 0.690762 | ACATGGGCTGTTAAGGACGT | 59.309 | 50.000 | 0.00 | 0.0 | 32.90 | 4.34 | R |
4384 | 7017 | 0.470766 | TTGGAACGGTGGCTTGTACT | 59.529 | 50.000 | 0.00 | 0.0 | 0.00 | 2.73 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
130 | 131 | 5.530543 | TGAGCACACTGTTCATATTTGTTCA | 59.469 | 36.000 | 0.00 | 0.00 | 32.63 | 3.18 |
143 | 144 | 6.883756 | TCATATTTGTTCATCTTGTACAGCCA | 59.116 | 34.615 | 0.00 | 0.00 | 29.59 | 4.75 |
148 | 149 | 2.540383 | TCATCTTGTACAGCCAGGAGT | 58.460 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
346 | 467 | 5.016051 | TGCCTGAAACATTTAAGTTTGCA | 57.984 | 34.783 | 0.00 | 0.00 | 41.48 | 4.08 |
347 | 468 | 5.609423 | TGCCTGAAACATTTAAGTTTGCAT | 58.391 | 33.333 | 0.00 | 0.00 | 41.48 | 3.96 |
348 | 469 | 6.753180 | TGCCTGAAACATTTAAGTTTGCATA | 58.247 | 32.000 | 0.00 | 0.00 | 41.48 | 3.14 |
349 | 470 | 7.385267 | TGCCTGAAACATTTAAGTTTGCATAT | 58.615 | 30.769 | 0.00 | 0.00 | 41.48 | 1.78 |
350 | 471 | 8.526978 | TGCCTGAAACATTTAAGTTTGCATATA | 58.473 | 29.630 | 0.00 | 0.00 | 41.48 | 0.86 |
351 | 472 | 8.807581 | GCCTGAAACATTTAAGTTTGCATATAC | 58.192 | 33.333 | 0.00 | 0.00 | 41.48 | 1.47 |
394 | 515 | 6.638096 | CACCAAATGCATGTATCCTAATCA | 57.362 | 37.500 | 0.00 | 0.00 | 0.00 | 2.57 |
395 | 516 | 7.041635 | CACCAAATGCATGTATCCTAATCAA | 57.958 | 36.000 | 0.00 | 0.00 | 0.00 | 2.57 |
396 | 517 | 7.663827 | CACCAAATGCATGTATCCTAATCAAT | 58.336 | 34.615 | 0.00 | 0.00 | 0.00 | 2.57 |
397 | 518 | 7.597369 | CACCAAATGCATGTATCCTAATCAATG | 59.403 | 37.037 | 0.00 | 0.00 | 0.00 | 2.82 |
398 | 519 | 7.288389 | ACCAAATGCATGTATCCTAATCAATGT | 59.712 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
399 | 520 | 8.145767 | CCAAATGCATGTATCCTAATCAATGTT | 58.854 | 33.333 | 0.00 | 0.00 | 0.00 | 2.71 |
400 | 521 | 9.537192 | CAAATGCATGTATCCTAATCAATGTTT | 57.463 | 29.630 | 0.00 | 0.00 | 0.00 | 2.83 |
411 | 532 | 7.936584 | TCCTAATCAATGTTTTAAATAGCGGG | 58.063 | 34.615 | 0.00 | 0.00 | 0.00 | 6.13 |
412 | 533 | 6.640907 | CCTAATCAATGTTTTAAATAGCGGGC | 59.359 | 38.462 | 0.00 | 0.00 | 0.00 | 6.13 |
413 | 534 | 5.852282 | ATCAATGTTTTAAATAGCGGGCT | 57.148 | 34.783 | 0.00 | 0.00 | 0.00 | 5.19 |
414 | 535 | 6.952773 | ATCAATGTTTTAAATAGCGGGCTA | 57.047 | 33.333 | 2.42 | 2.42 | 0.00 | 3.93 |
415 | 536 | 6.952773 | TCAATGTTTTAAATAGCGGGCTAT | 57.047 | 33.333 | 7.36 | 7.36 | 40.63 | 2.97 |
416 | 537 | 6.734137 | TCAATGTTTTAAATAGCGGGCTATG | 58.266 | 36.000 | 13.53 | 0.00 | 39.03 | 2.23 |
417 | 538 | 5.705609 | ATGTTTTAAATAGCGGGCTATGG | 57.294 | 39.130 | 13.53 | 0.00 | 39.03 | 2.74 |
418 | 539 | 4.783055 | TGTTTTAAATAGCGGGCTATGGA | 58.217 | 39.130 | 13.53 | 2.82 | 39.03 | 3.41 |
419 | 540 | 5.194432 | TGTTTTAAATAGCGGGCTATGGAA | 58.806 | 37.500 | 13.53 | 8.30 | 39.03 | 3.53 |
420 | 541 | 5.652891 | TGTTTTAAATAGCGGGCTATGGAAA | 59.347 | 36.000 | 13.53 | 12.97 | 39.03 | 3.13 |
421 | 542 | 6.153000 | TGTTTTAAATAGCGGGCTATGGAAAA | 59.847 | 34.615 | 13.53 | 17.02 | 39.03 | 2.29 |
422 | 543 | 6.969993 | TTTAAATAGCGGGCTATGGAAAAT | 57.030 | 33.333 | 13.53 | 0.00 | 39.03 | 1.82 |
423 | 544 | 8.354426 | GTTTTAAATAGCGGGCTATGGAAAATA | 58.646 | 33.333 | 22.50 | 9.79 | 39.03 | 1.40 |
424 | 545 | 7.681939 | TTAAATAGCGGGCTATGGAAAATAG | 57.318 | 36.000 | 13.53 | 0.00 | 39.03 | 1.73 |
425 | 546 | 1.897560 | AGCGGGCTATGGAAAATAGC | 58.102 | 50.000 | 8.52 | 8.52 | 44.56 | 2.97 |
426 | 547 | 0.517316 | GCGGGCTATGGAAAATAGCG | 59.483 | 55.000 | 10.37 | 0.97 | 45.83 | 4.26 |
427 | 548 | 1.156736 | CGGGCTATGGAAAATAGCGG | 58.843 | 55.000 | 10.37 | 2.96 | 45.83 | 5.52 |
428 | 549 | 0.881796 | GGGCTATGGAAAATAGCGGC | 59.118 | 55.000 | 10.37 | 0.00 | 45.83 | 6.53 |
429 | 550 | 0.517316 | GGCTATGGAAAATAGCGGCG | 59.483 | 55.000 | 0.51 | 0.51 | 45.83 | 6.46 |
430 | 551 | 0.517316 | GCTATGGAAAATAGCGGCGG | 59.483 | 55.000 | 9.78 | 0.00 | 37.79 | 6.13 |
431 | 552 | 1.156736 | CTATGGAAAATAGCGGCGGG | 58.843 | 55.000 | 9.78 | 0.00 | 0.00 | 6.13 |
432 | 553 | 0.887387 | TATGGAAAATAGCGGCGGGC | 60.887 | 55.000 | 9.78 | 0.00 | 44.05 | 6.13 |
433 | 554 | 3.592814 | GGAAAATAGCGGCGGGCC | 61.593 | 66.667 | 9.78 | 0.00 | 45.17 | 5.80 |
434 | 555 | 2.516225 | GAAAATAGCGGCGGGCCT | 60.516 | 61.111 | 9.78 | 0.00 | 45.17 | 5.19 |
435 | 556 | 2.516225 | AAAATAGCGGCGGGCCTC | 60.516 | 61.111 | 9.78 | 0.00 | 45.17 | 4.70 |
436 | 557 | 4.564110 | AAATAGCGGCGGGCCTCC | 62.564 | 66.667 | 9.78 | 1.28 | 45.17 | 4.30 |
442 | 563 | 4.794648 | CGGCGGGCCTCCAAATCA | 62.795 | 66.667 | 13.99 | 0.00 | 0.00 | 2.57 |
443 | 564 | 2.830370 | GGCGGGCCTCCAAATCAG | 60.830 | 66.667 | 7.92 | 0.00 | 0.00 | 2.90 |
444 | 565 | 3.521796 | GCGGGCCTCCAAATCAGC | 61.522 | 66.667 | 0.84 | 0.00 | 0.00 | 4.26 |
445 | 566 | 2.273449 | CGGGCCTCCAAATCAGCT | 59.727 | 61.111 | 0.84 | 0.00 | 0.00 | 4.24 |
446 | 567 | 1.526887 | CGGGCCTCCAAATCAGCTA | 59.473 | 57.895 | 0.84 | 0.00 | 0.00 | 3.32 |
447 | 568 | 0.109342 | CGGGCCTCCAAATCAGCTAT | 59.891 | 55.000 | 0.84 | 0.00 | 0.00 | 2.97 |
448 | 569 | 1.347707 | CGGGCCTCCAAATCAGCTATA | 59.652 | 52.381 | 0.84 | 0.00 | 0.00 | 1.31 |
449 | 570 | 2.224523 | CGGGCCTCCAAATCAGCTATAA | 60.225 | 50.000 | 0.84 | 0.00 | 0.00 | 0.98 |
450 | 571 | 3.149981 | GGGCCTCCAAATCAGCTATAAC | 58.850 | 50.000 | 0.84 | 0.00 | 0.00 | 1.89 |
451 | 572 | 2.808543 | GGCCTCCAAATCAGCTATAACG | 59.191 | 50.000 | 0.00 | 0.00 | 0.00 | 3.18 |
452 | 573 | 2.808543 | GCCTCCAAATCAGCTATAACGG | 59.191 | 50.000 | 0.00 | 0.00 | 0.00 | 4.44 |
453 | 574 | 3.403038 | CCTCCAAATCAGCTATAACGGG | 58.597 | 50.000 | 0.00 | 0.00 | 0.00 | 5.28 |
454 | 575 | 2.808543 | CTCCAAATCAGCTATAACGGGC | 59.191 | 50.000 | 0.00 | 0.00 | 0.00 | 6.13 |
455 | 576 | 2.438021 | TCCAAATCAGCTATAACGGGCT | 59.562 | 45.455 | 0.00 | 0.00 | 39.60 | 5.19 |
456 | 577 | 3.644265 | TCCAAATCAGCTATAACGGGCTA | 59.356 | 43.478 | 0.00 | 0.00 | 37.00 | 3.93 |
457 | 578 | 4.101898 | TCCAAATCAGCTATAACGGGCTAA | 59.898 | 41.667 | 0.00 | 0.00 | 37.00 | 3.09 |
458 | 579 | 4.819630 | CCAAATCAGCTATAACGGGCTAAA | 59.180 | 41.667 | 0.00 | 0.00 | 37.00 | 1.85 |
459 | 580 | 5.049405 | CCAAATCAGCTATAACGGGCTAAAG | 60.049 | 44.000 | 0.00 | 0.00 | 37.00 | 1.85 |
460 | 581 | 3.107642 | TCAGCTATAACGGGCTAAAGC | 57.892 | 47.619 | 0.00 | 0.00 | 37.00 | 3.51 |
461 | 582 | 1.792949 | CAGCTATAACGGGCTAAAGCG | 59.207 | 52.381 | 0.00 | 0.00 | 43.26 | 4.68 |
462 | 583 | 1.145803 | GCTATAACGGGCTAAAGCGG | 58.854 | 55.000 | 0.00 | 0.00 | 43.26 | 5.52 |
463 | 584 | 1.792006 | CTATAACGGGCTAAAGCGGG | 58.208 | 55.000 | 0.00 | 0.00 | 43.26 | 6.13 |
464 | 585 | 0.249996 | TATAACGGGCTAAAGCGGGC | 60.250 | 55.000 | 0.00 | 0.00 | 43.26 | 6.13 |
465 | 586 | 1.979619 | ATAACGGGCTAAAGCGGGCT | 61.980 | 55.000 | 0.00 | 0.00 | 43.26 | 5.19 |
466 | 587 | 1.329171 | TAACGGGCTAAAGCGGGCTA | 61.329 | 55.000 | 0.00 | 0.00 | 43.26 | 3.93 |
467 | 588 | 1.979619 | AACGGGCTAAAGCGGGCTAT | 61.980 | 55.000 | 0.00 | 0.00 | 43.26 | 2.97 |
468 | 589 | 1.227853 | CGGGCTAAAGCGGGCTATT | 60.228 | 57.895 | 0.00 | 0.00 | 43.26 | 1.73 |
469 | 590 | 0.818040 | CGGGCTAAAGCGGGCTATTT | 60.818 | 55.000 | 0.00 | 0.00 | 43.26 | 1.40 |
470 | 591 | 1.541670 | CGGGCTAAAGCGGGCTATTTA | 60.542 | 52.381 | 0.00 | 0.00 | 43.26 | 1.40 |
471 | 592 | 2.791655 | GGGCTAAAGCGGGCTATTTAT | 58.208 | 47.619 | 0.00 | 0.00 | 43.26 | 1.40 |
472 | 593 | 2.488153 | GGGCTAAAGCGGGCTATTTATG | 59.512 | 50.000 | 0.00 | 0.00 | 43.26 | 1.90 |
473 | 594 | 3.408634 | GGCTAAAGCGGGCTATTTATGA | 58.591 | 45.455 | 0.00 | 0.00 | 43.26 | 2.15 |
474 | 595 | 3.818773 | GGCTAAAGCGGGCTATTTATGAA | 59.181 | 43.478 | 0.00 | 0.00 | 43.26 | 2.57 |
475 | 596 | 4.083271 | GGCTAAAGCGGGCTATTTATGAAG | 60.083 | 45.833 | 0.00 | 0.00 | 43.26 | 3.02 |
476 | 597 | 4.083271 | GCTAAAGCGGGCTATTTATGAAGG | 60.083 | 45.833 | 0.00 | 0.00 | 0.00 | 3.46 |
477 | 598 | 1.897560 | AGCGGGCTATTTATGAAGGC | 58.102 | 50.000 | 0.00 | 0.00 | 37.55 | 4.35 |
478 | 599 | 1.142870 | AGCGGGCTATTTATGAAGGCA | 59.857 | 47.619 | 0.00 | 0.00 | 39.91 | 4.75 |
479 | 600 | 1.537202 | GCGGGCTATTTATGAAGGCAG | 59.463 | 52.381 | 0.00 | 0.00 | 39.91 | 4.85 |
480 | 601 | 2.851195 | CGGGCTATTTATGAAGGCAGT | 58.149 | 47.619 | 0.00 | 0.00 | 39.91 | 4.40 |
481 | 602 | 2.808543 | CGGGCTATTTATGAAGGCAGTC | 59.191 | 50.000 | 0.00 | 0.00 | 39.91 | 3.51 |
482 | 603 | 3.744214 | CGGGCTATTTATGAAGGCAGTCA | 60.744 | 47.826 | 0.00 | 0.00 | 39.91 | 3.41 |
483 | 604 | 4.401925 | GGGCTATTTATGAAGGCAGTCAT | 58.598 | 43.478 | 8.50 | 8.50 | 41.21 | 3.06 |
484 | 605 | 4.829492 | GGGCTATTTATGAAGGCAGTCATT | 59.171 | 41.667 | 8.72 | 0.00 | 39.07 | 2.57 |
485 | 606 | 5.302823 | GGGCTATTTATGAAGGCAGTCATTT | 59.697 | 40.000 | 8.72 | 0.00 | 39.07 | 2.32 |
486 | 607 | 6.490040 | GGGCTATTTATGAAGGCAGTCATTTA | 59.510 | 38.462 | 8.72 | 0.00 | 39.07 | 1.40 |
487 | 608 | 7.308830 | GGGCTATTTATGAAGGCAGTCATTTAG | 60.309 | 40.741 | 8.72 | 8.93 | 39.07 | 1.85 |
488 | 609 | 7.229506 | GGCTATTTATGAAGGCAGTCATTTAGT | 59.770 | 37.037 | 8.72 | 0.00 | 39.07 | 2.24 |
489 | 610 | 8.072567 | GCTATTTATGAAGGCAGTCATTTAGTG | 58.927 | 37.037 | 8.72 | 0.96 | 39.07 | 2.74 |
490 | 611 | 6.757897 | TTTATGAAGGCAGTCATTTAGTGG | 57.242 | 37.500 | 8.72 | 0.00 | 39.07 | 4.00 |
495 | 616 | 0.811281 | GCAGTCATTTAGTGGCACCC | 59.189 | 55.000 | 15.27 | 0.00 | 33.88 | 4.61 |
496 | 617 | 1.614317 | GCAGTCATTTAGTGGCACCCT | 60.614 | 52.381 | 15.27 | 0.00 | 33.88 | 4.34 |
497 | 618 | 2.086869 | CAGTCATTTAGTGGCACCCTG | 58.913 | 52.381 | 15.27 | 6.99 | 33.88 | 4.45 |
498 | 619 | 0.811281 | GTCATTTAGTGGCACCCTGC | 59.189 | 55.000 | 15.27 | 0.51 | 44.08 | 4.85 |
499 | 620 | 0.698238 | TCATTTAGTGGCACCCTGCT | 59.302 | 50.000 | 15.27 | 0.00 | 44.28 | 4.24 |
500 | 621 | 0.813184 | CATTTAGTGGCACCCTGCTG | 59.187 | 55.000 | 15.27 | 2.24 | 44.28 | 4.41 |
501 | 622 | 0.698238 | ATTTAGTGGCACCCTGCTGA | 59.302 | 50.000 | 15.27 | 0.00 | 44.28 | 4.26 |
502 | 623 | 0.476338 | TTTAGTGGCACCCTGCTGAA | 59.524 | 50.000 | 15.27 | 0.00 | 44.28 | 3.02 |
503 | 624 | 0.476338 | TTAGTGGCACCCTGCTGAAA | 59.524 | 50.000 | 15.27 | 0.00 | 44.28 | 2.69 |
504 | 625 | 0.476338 | TAGTGGCACCCTGCTGAAAA | 59.524 | 50.000 | 15.27 | 0.00 | 44.28 | 2.29 |
505 | 626 | 0.825010 | AGTGGCACCCTGCTGAAAAG | 60.825 | 55.000 | 15.27 | 0.00 | 44.28 | 2.27 |
506 | 627 | 1.531365 | TGGCACCCTGCTGAAAAGG | 60.531 | 57.895 | 0.00 | 0.00 | 44.28 | 3.11 |
507 | 628 | 2.653115 | GCACCCTGCTGAAAAGGC | 59.347 | 61.111 | 0.00 | 0.00 | 40.96 | 4.35 |
508 | 629 | 1.905354 | GCACCCTGCTGAAAAGGCT | 60.905 | 57.895 | 0.00 | 0.00 | 40.96 | 4.58 |
509 | 630 | 0.609131 | GCACCCTGCTGAAAAGGCTA | 60.609 | 55.000 | 0.00 | 0.00 | 40.96 | 3.93 |
510 | 631 | 1.957113 | GCACCCTGCTGAAAAGGCTAT | 60.957 | 52.381 | 0.00 | 0.00 | 40.96 | 2.97 |
511 | 632 | 2.683742 | GCACCCTGCTGAAAAGGCTATA | 60.684 | 50.000 | 0.00 | 0.00 | 40.96 | 1.31 |
512 | 633 | 3.209410 | CACCCTGCTGAAAAGGCTATAG | 58.791 | 50.000 | 0.00 | 0.00 | 33.07 | 1.31 |
513 | 634 | 2.225467 | CCCTGCTGAAAAGGCTATAGC | 58.775 | 52.381 | 16.78 | 16.78 | 41.14 | 2.97 |
514 | 635 | 1.869767 | CCTGCTGAAAAGGCTATAGCG | 59.130 | 52.381 | 18.30 | 4.04 | 43.26 | 4.26 |
515 | 636 | 1.869767 | CTGCTGAAAAGGCTATAGCGG | 59.130 | 52.381 | 18.30 | 6.64 | 43.26 | 5.52 |
516 | 637 | 1.230324 | GCTGAAAAGGCTATAGCGGG | 58.770 | 55.000 | 18.30 | 4.63 | 43.26 | 6.13 |
517 | 638 | 1.475213 | GCTGAAAAGGCTATAGCGGGT | 60.475 | 52.381 | 18.30 | 2.92 | 43.26 | 5.28 |
518 | 639 | 2.919228 | CTGAAAAGGCTATAGCGGGTT | 58.081 | 47.619 | 18.30 | 11.25 | 43.26 | 4.11 |
519 | 640 | 3.743269 | GCTGAAAAGGCTATAGCGGGTTA | 60.743 | 47.826 | 18.30 | 2.81 | 43.26 | 2.85 |
520 | 641 | 4.642429 | CTGAAAAGGCTATAGCGGGTTAT | 58.358 | 43.478 | 18.30 | 2.63 | 43.26 | 1.89 |
521 | 642 | 5.790593 | CTGAAAAGGCTATAGCGGGTTATA | 58.209 | 41.667 | 18.30 | 1.89 | 43.26 | 0.98 |
522 | 643 | 5.790593 | TGAAAAGGCTATAGCGGGTTATAG | 58.209 | 41.667 | 18.30 | 5.50 | 43.26 | 1.31 |
526 | 647 | 3.498927 | GCTATAGCGGGTTATAGCGAA | 57.501 | 47.619 | 9.40 | 0.00 | 44.89 | 4.70 |
527 | 648 | 3.436496 | GCTATAGCGGGTTATAGCGAAG | 58.564 | 50.000 | 9.40 | 0.00 | 44.89 | 3.79 |
542 | 663 | 2.656560 | CGAAGCTATAGCCGGCTATT | 57.343 | 50.000 | 44.65 | 31.63 | 43.38 | 1.73 |
543 | 664 | 2.960819 | CGAAGCTATAGCCGGCTATTT | 58.039 | 47.619 | 44.65 | 34.49 | 43.38 | 1.40 |
544 | 665 | 4.106029 | CGAAGCTATAGCCGGCTATTTA | 57.894 | 45.455 | 44.65 | 30.51 | 43.38 | 1.40 |
545 | 666 | 4.491676 | CGAAGCTATAGCCGGCTATTTAA | 58.508 | 43.478 | 44.65 | 29.85 | 43.38 | 1.52 |
546 | 667 | 4.927425 | CGAAGCTATAGCCGGCTATTTAAA | 59.073 | 41.667 | 44.65 | 29.52 | 43.38 | 1.52 |
547 | 668 | 5.407387 | CGAAGCTATAGCCGGCTATTTAAAA | 59.593 | 40.000 | 44.65 | 29.19 | 43.38 | 1.52 |
548 | 669 | 6.555812 | AAGCTATAGCCGGCTATTTAAAAC | 57.444 | 37.500 | 44.65 | 28.54 | 43.38 | 2.43 |
549 | 670 | 5.866207 | AGCTATAGCCGGCTATTTAAAACT | 58.134 | 37.500 | 44.65 | 29.88 | 43.38 | 2.66 |
550 | 671 | 7.001099 | AGCTATAGCCGGCTATTTAAAACTA | 57.999 | 36.000 | 44.65 | 27.23 | 43.38 | 2.24 |
551 | 672 | 7.621796 | AGCTATAGCCGGCTATTTAAAACTAT | 58.378 | 34.615 | 44.65 | 26.21 | 43.38 | 2.12 |
552 | 673 | 7.549488 | AGCTATAGCCGGCTATTTAAAACTATG | 59.451 | 37.037 | 44.65 | 24.19 | 43.38 | 2.23 |
553 | 674 | 7.548075 | GCTATAGCCGGCTATTTAAAACTATGA | 59.452 | 37.037 | 44.65 | 25.48 | 39.65 | 2.15 |
554 | 675 | 9.601217 | CTATAGCCGGCTATTTAAAACTATGAT | 57.399 | 33.333 | 44.65 | 25.13 | 39.65 | 2.45 |
555 | 676 | 6.803154 | AGCCGGCTATTTAAAACTATGATC | 57.197 | 37.500 | 31.86 | 0.00 | 0.00 | 2.92 |
556 | 677 | 5.705905 | AGCCGGCTATTTAAAACTATGATCC | 59.294 | 40.000 | 31.86 | 0.00 | 0.00 | 3.36 |
557 | 678 | 5.705905 | GCCGGCTATTTAAAACTATGATCCT | 59.294 | 40.000 | 22.15 | 0.00 | 0.00 | 3.24 |
558 | 679 | 6.348540 | GCCGGCTATTTAAAACTATGATCCTG | 60.349 | 42.308 | 22.15 | 0.00 | 0.00 | 3.86 |
559 | 680 | 6.934645 | CCGGCTATTTAAAACTATGATCCTGA | 59.065 | 38.462 | 0.00 | 0.00 | 0.00 | 3.86 |
560 | 681 | 7.607991 | CCGGCTATTTAAAACTATGATCCTGAT | 59.392 | 37.037 | 0.00 | 0.00 | 0.00 | 2.90 |
561 | 682 | 9.003658 | CGGCTATTTAAAACTATGATCCTGATT | 57.996 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
590 | 711 | 9.170734 | TGAATCATATATAAAGATGCCTGAAGC | 57.829 | 33.333 | 2.79 | 0.00 | 44.14 | 3.86 |
601 | 722 | 1.706443 | GCCTGAAGCATCAACTTTGC | 58.294 | 50.000 | 0.00 | 0.00 | 42.97 | 3.68 |
662 | 783 | 5.401972 | GCATTTGCATATGCGCATAACTTTA | 59.598 | 36.000 | 32.02 | 18.20 | 45.83 | 1.85 |
674 | 795 | 5.447818 | GCGCATAACTTTAACTTGCAGATCT | 60.448 | 40.000 | 0.30 | 0.00 | 32.94 | 2.75 |
734 | 1229 | 7.764331 | ACATTTAGTCCAAGTACAAAACGTTT | 58.236 | 30.769 | 7.96 | 7.96 | 0.00 | 3.60 |
824 | 1327 | 6.071616 | GCTCATACCCCAAATTTGAGTAACAA | 60.072 | 38.462 | 19.86 | 9.13 | 36.91 | 2.83 |
1545 | 2219 | 4.523558 | GGTACTACTCAGTCTTCACCAAGT | 59.476 | 45.833 | 0.00 | 0.00 | 36.14 | 3.16 |
1684 | 2358 | 5.339695 | GGGATTATTCAGTTACCTCCACCAA | 60.340 | 44.000 | 0.00 | 0.00 | 0.00 | 3.67 |
1974 | 4341 | 4.770531 | TGCTTACCTTCTGTAGCTACTCAA | 59.229 | 41.667 | 23.84 | 14.84 | 0.00 | 3.02 |
2079 | 4446 | 8.770828 | TCTTTTCTAAATACGTTTGAACCTCTG | 58.229 | 33.333 | 0.00 | 0.00 | 0.00 | 3.35 |
2134 | 4501 | 7.346175 | TGGTAGGCAATTGTTCTAATACCTCTA | 59.654 | 37.037 | 7.40 | 0.00 | 33.99 | 2.43 |
2186 | 4554 | 6.089954 | GCATTGTTTTGTCTTCTTATTCAGCC | 59.910 | 38.462 | 0.00 | 0.00 | 0.00 | 4.85 |
2191 | 4559 | 9.077885 | TGTTTTGTCTTCTTATTCAGCCTTATT | 57.922 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
2285 | 4653 | 3.700539 | TGGAAAGCACCATTGGATGTATG | 59.299 | 43.478 | 10.37 | 0.00 | 34.77 | 2.39 |
2407 | 4775 | 9.108284 | CAAATTTTGATGGTTTTAAGGTTGAGT | 57.892 | 29.630 | 2.88 | 0.00 | 0.00 | 3.41 |
2479 | 4848 | 3.853355 | ACAAGCCTCTGAAGGATATGG | 57.147 | 47.619 | 0.00 | 0.00 | 41.63 | 2.74 |
2492 | 4861 | 8.632679 | TCTGAAGGATATGGTTGCAATAAAATC | 58.367 | 33.333 | 0.59 | 4.45 | 0.00 | 2.17 |
2622 | 5012 | 8.221251 | TCAACAGTATCACCATCTACTCTATCT | 58.779 | 37.037 | 0.00 | 0.00 | 0.00 | 1.98 |
2623 | 5013 | 8.855110 | CAACAGTATCACCATCTACTCTATCTT | 58.145 | 37.037 | 0.00 | 0.00 | 0.00 | 2.40 |
2896 | 5396 | 2.741211 | GTTCGTCGTTCCCCTGGC | 60.741 | 66.667 | 0.00 | 0.00 | 0.00 | 4.85 |
2965 | 5465 | 1.183676 | AGACGTCCTTAACAGCCCGT | 61.184 | 55.000 | 13.01 | 0.00 | 0.00 | 5.28 |
2966 | 5466 | 1.005394 | ACGTCCTTAACAGCCCGTG | 60.005 | 57.895 | 0.00 | 0.00 | 0.00 | 4.94 |
2967 | 5467 | 1.005394 | CGTCCTTAACAGCCCGTGT | 60.005 | 57.895 | 0.00 | 0.00 | 43.24 | 4.49 |
2976 | 5476 | 2.165319 | ACAGCCCGTGTTAAGAAGAC | 57.835 | 50.000 | 0.00 | 0.00 | 34.94 | 3.01 |
2977 | 5477 | 1.068474 | CAGCCCGTGTTAAGAAGACG | 58.932 | 55.000 | 2.21 | 2.21 | 46.39 | 4.18 |
2978 | 5478 | 0.677842 | AGCCCGTGTTAAGAAGACGT | 59.322 | 50.000 | 7.91 | 0.00 | 45.51 | 4.34 |
2979 | 5479 | 1.066136 | GCCCGTGTTAAGAAGACGTC | 58.934 | 55.000 | 7.70 | 7.70 | 45.51 | 4.34 |
2980 | 5480 | 1.706443 | CCCGTGTTAAGAAGACGTCC | 58.294 | 55.000 | 13.01 | 0.00 | 45.51 | 4.79 |
2981 | 5481 | 1.271656 | CCCGTGTTAAGAAGACGTCCT | 59.728 | 52.381 | 13.01 | 0.00 | 45.51 | 3.85 |
2982 | 5482 | 2.288640 | CCCGTGTTAAGAAGACGTCCTT | 60.289 | 50.000 | 13.01 | 11.88 | 45.51 | 3.36 |
2983 | 5483 | 3.057315 | CCCGTGTTAAGAAGACGTCCTTA | 60.057 | 47.826 | 13.01 | 10.84 | 45.51 | 2.69 |
2984 | 5484 | 4.549458 | CCGTGTTAAGAAGACGTCCTTAA | 58.451 | 43.478 | 17.72 | 17.72 | 45.51 | 1.85 |
2988 | 5488 | 5.512573 | GTTAAGAAGACGTCCTTAACAGC | 57.487 | 43.478 | 31.30 | 17.44 | 46.80 | 4.40 |
2989 | 5489 | 2.745515 | AGAAGACGTCCTTAACAGCC | 57.254 | 50.000 | 13.01 | 0.00 | 34.68 | 4.85 |
2990 | 5490 | 1.275573 | AGAAGACGTCCTTAACAGCCC | 59.724 | 52.381 | 13.01 | 0.00 | 34.68 | 5.19 |
2991 | 5491 | 1.001633 | GAAGACGTCCTTAACAGCCCA | 59.998 | 52.381 | 13.01 | 0.00 | 34.68 | 5.36 |
3049 | 5549 | 4.393990 | CACACTGCACATAAGACATCACAT | 59.606 | 41.667 | 0.00 | 0.00 | 0.00 | 3.21 |
3085 | 5585 | 4.281688 | AGGGGTCACATTTCACATGAAAAG | 59.718 | 41.667 | 10.90 | 9.24 | 45.81 | 2.27 |
3086 | 5586 | 4.039124 | GGGGTCACATTTCACATGAAAAGT | 59.961 | 41.667 | 10.90 | 9.85 | 45.81 | 2.66 |
3130 | 5631 | 6.957631 | TCAGCCTGATTCTATTGAAAACCTA | 58.042 | 36.000 | 0.00 | 0.00 | 35.63 | 3.08 |
3131 | 5632 | 7.577303 | TCAGCCTGATTCTATTGAAAACCTAT | 58.423 | 34.615 | 0.00 | 0.00 | 35.63 | 2.57 |
3132 | 5633 | 8.055181 | TCAGCCTGATTCTATTGAAAACCTATT | 58.945 | 33.333 | 0.00 | 0.00 | 35.63 | 1.73 |
3133 | 5634 | 8.348507 | CAGCCTGATTCTATTGAAAACCTATTC | 58.651 | 37.037 | 0.00 | 0.00 | 35.63 | 1.75 |
3134 | 5635 | 8.055181 | AGCCTGATTCTATTGAAAACCTATTCA | 58.945 | 33.333 | 0.00 | 0.00 | 37.53 | 2.57 |
3135 | 5636 | 8.348507 | GCCTGATTCTATTGAAAACCTATTCAG | 58.651 | 37.037 | 7.17 | 7.17 | 40.21 | 3.02 |
3136 | 5637 | 8.844244 | CCTGATTCTATTGAAAACCTATTCAGG | 58.156 | 37.037 | 14.66 | 14.66 | 40.26 | 3.86 |
3137 | 5638 | 8.225603 | TGATTCTATTGAAAACCTATTCAGGC | 57.774 | 34.615 | 0.00 | 0.00 | 40.21 | 4.85 |
3138 | 5639 | 7.012327 | TGATTCTATTGAAAACCTATTCAGGCG | 59.988 | 37.037 | 0.00 | 0.00 | 40.21 | 5.52 |
3139 | 5640 | 7.054124 | ATTCTATTGAAAACCTATTCAGGCGA | 58.946 | 34.615 | 0.00 | 0.00 | 40.21 | 5.54 |
3140 | 5641 | 7.556275 | ATTCTATTGAAAACCTATTCAGGCGAA | 59.444 | 33.333 | 0.00 | 0.00 | 40.21 | 4.70 |
3149 | 5650 | 4.950050 | CCTATTCAGGCGAACATAAGACT | 58.050 | 43.478 | 0.00 | 0.00 | 34.35 | 3.24 |
3150 | 5651 | 6.085555 | CCTATTCAGGCGAACATAAGACTA | 57.914 | 41.667 | 0.00 | 0.00 | 34.35 | 2.59 |
3151 | 5652 | 5.921408 | CCTATTCAGGCGAACATAAGACTAC | 59.079 | 44.000 | 0.00 | 0.00 | 34.35 | 2.73 |
3152 | 5653 | 5.599999 | ATTCAGGCGAACATAAGACTACT | 57.400 | 39.130 | 0.00 | 0.00 | 32.81 | 2.57 |
3153 | 5654 | 4.371855 | TCAGGCGAACATAAGACTACTG | 57.628 | 45.455 | 0.00 | 0.00 | 0.00 | 2.74 |
3154 | 5655 | 4.014406 | TCAGGCGAACATAAGACTACTGA | 58.986 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
3155 | 5656 | 4.106197 | CAGGCGAACATAAGACTACTGAC | 58.894 | 47.826 | 0.00 | 0.00 | 0.00 | 3.51 |
3156 | 5657 | 3.762288 | AGGCGAACATAAGACTACTGACA | 59.238 | 43.478 | 0.00 | 0.00 | 0.00 | 3.58 |
3157 | 5658 | 4.106197 | GGCGAACATAAGACTACTGACAG | 58.894 | 47.826 | 0.00 | 0.00 | 0.00 | 3.51 |
3158 | 5659 | 4.142447 | GGCGAACATAAGACTACTGACAGA | 60.142 | 45.833 | 10.08 | 0.00 | 0.00 | 3.41 |
3159 | 5660 | 5.399858 | GCGAACATAAGACTACTGACAGAA | 58.600 | 41.667 | 10.08 | 0.00 | 0.00 | 3.02 |
3160 | 5661 | 5.513495 | GCGAACATAAGACTACTGACAGAAG | 59.487 | 44.000 | 10.08 | 0.00 | 0.00 | 2.85 |
3161 | 5662 | 6.030849 | CGAACATAAGACTACTGACAGAAGG | 58.969 | 44.000 | 10.08 | 1.23 | 0.00 | 3.46 |
3162 | 5663 | 6.127980 | CGAACATAAGACTACTGACAGAAGGA | 60.128 | 42.308 | 10.08 | 0.00 | 0.00 | 3.36 |
3163 | 5664 | 6.518208 | ACATAAGACTACTGACAGAAGGAC | 57.482 | 41.667 | 10.08 | 0.00 | 0.00 | 3.85 |
3164 | 5665 | 6.010850 | ACATAAGACTACTGACAGAAGGACA | 58.989 | 40.000 | 10.08 | 0.00 | 0.00 | 4.02 |
3165 | 5666 | 6.151985 | ACATAAGACTACTGACAGAAGGACAG | 59.848 | 42.308 | 10.08 | 0.00 | 37.62 | 3.51 |
3166 | 5667 | 3.426615 | AGACTACTGACAGAAGGACAGG | 58.573 | 50.000 | 10.08 | 0.00 | 36.17 | 4.00 |
3167 | 5668 | 1.896465 | ACTACTGACAGAAGGACAGGC | 59.104 | 52.381 | 10.08 | 0.00 | 36.17 | 4.85 |
3168 | 5669 | 0.888619 | TACTGACAGAAGGACAGGCG | 59.111 | 55.000 | 10.08 | 0.00 | 36.17 | 5.52 |
3169 | 5670 | 1.739562 | CTGACAGAAGGACAGGCGC | 60.740 | 63.158 | 0.00 | 0.00 | 0.00 | 6.53 |
3177 | 5678 | 2.357034 | GGACAGGCGCAAAGACGA | 60.357 | 61.111 | 10.83 | 0.00 | 34.06 | 4.20 |
3178 | 5679 | 2.668280 | GGACAGGCGCAAAGACGAC | 61.668 | 63.158 | 10.83 | 0.00 | 43.08 | 4.34 |
3186 | 5687 | 1.136446 | GCGCAAAGACGACGTTAACAT | 60.136 | 47.619 | 0.30 | 0.00 | 34.06 | 2.71 |
3190 | 5691 | 1.986698 | AAGACGACGTTAACATCCCG | 58.013 | 50.000 | 0.13 | 5.53 | 0.00 | 5.14 |
3251 | 5755 | 5.353400 | CACAGCATACAAGACATCACAGATT | 59.647 | 40.000 | 0.00 | 0.00 | 0.00 | 2.40 |
3280 | 5787 | 9.835389 | AAAATTTATGGGTCACATTTCATATGG | 57.165 | 29.630 | 2.13 | 0.00 | 41.03 | 2.74 |
3281 | 5788 | 8.780616 | AATTTATGGGTCACATTTCATATGGA | 57.219 | 30.769 | 2.13 | 0.00 | 41.03 | 3.41 |
3282 | 5789 | 8.780616 | ATTTATGGGTCACATTTCATATGGAA | 57.219 | 30.769 | 0.00 | 0.00 | 41.03 | 3.53 |
3473 | 6000 | 0.537653 | GCGGGAGAAAGTAGAAGCCT | 59.462 | 55.000 | 0.00 | 0.00 | 0.00 | 4.58 |
3684 | 6271 | 3.913163 | GCAGTACGCGTTAAGATATCTCC | 59.087 | 47.826 | 20.78 | 0.00 | 0.00 | 3.71 |
3763 | 6358 | 0.188834 | CGGGAGGGGAAGAGTAGGAT | 59.811 | 60.000 | 0.00 | 0.00 | 0.00 | 3.24 |
4073 | 6691 | 1.890876 | TCTGTGTGCGCCTTGTTATT | 58.109 | 45.000 | 4.18 | 0.00 | 0.00 | 1.40 |
4074 | 6692 | 3.046968 | TCTGTGTGCGCCTTGTTATTA | 57.953 | 42.857 | 4.18 | 0.00 | 0.00 | 0.98 |
4075 | 6693 | 3.605634 | TCTGTGTGCGCCTTGTTATTAT | 58.394 | 40.909 | 4.18 | 0.00 | 0.00 | 1.28 |
4076 | 6694 | 3.621268 | TCTGTGTGCGCCTTGTTATTATC | 59.379 | 43.478 | 4.18 | 0.00 | 0.00 | 1.75 |
4077 | 6695 | 3.605634 | TGTGTGCGCCTTGTTATTATCT | 58.394 | 40.909 | 4.18 | 0.00 | 0.00 | 1.98 |
4078 | 6696 | 4.760878 | TGTGTGCGCCTTGTTATTATCTA | 58.239 | 39.130 | 4.18 | 0.00 | 0.00 | 1.98 |
4079 | 6697 | 4.808895 | TGTGTGCGCCTTGTTATTATCTAG | 59.191 | 41.667 | 4.18 | 0.00 | 0.00 | 2.43 |
4081 | 6699 | 5.047847 | TGTGCGCCTTGTTATTATCTAGAC | 58.952 | 41.667 | 4.18 | 0.00 | 0.00 | 2.59 |
4082 | 6700 | 5.163447 | TGTGCGCCTTGTTATTATCTAGACT | 60.163 | 40.000 | 4.18 | 0.00 | 0.00 | 3.24 |
4083 | 6701 | 5.402867 | GTGCGCCTTGTTATTATCTAGACTC | 59.597 | 44.000 | 4.18 | 0.00 | 0.00 | 3.36 |
4084 | 6702 | 5.302059 | TGCGCCTTGTTATTATCTAGACTCT | 59.698 | 40.000 | 4.18 | 0.00 | 0.00 | 3.24 |
4168 | 6793 | 7.038870 | TCAGCACTTTGTTATGTAGGGTAACTA | 60.039 | 37.037 | 0.00 | 0.00 | 34.08 | 2.24 |
4239 | 6866 | 3.768215 | TGAGGGCATATGTTTTTGCATGA | 59.232 | 39.130 | 4.29 | 0.00 | 40.66 | 3.07 |
4240 | 6867 | 4.114794 | GAGGGCATATGTTTTTGCATGAC | 58.885 | 43.478 | 4.29 | 0.00 | 40.66 | 3.06 |
4266 | 6896 | 2.095567 | GCATTTTCGCTTGAGCTGAGAA | 60.096 | 45.455 | 0.00 | 3.09 | 39.32 | 2.87 |
4288 | 6918 | 0.322187 | TTAAGGCCTCTTTGGGTCGC | 60.322 | 55.000 | 5.23 | 0.00 | 35.87 | 5.19 |
4328 | 6960 | 4.809426 | GGTTCGACTCTTTCAAGAACTGAA | 59.191 | 41.667 | 6.59 | 0.00 | 42.48 | 3.02 |
4368 | 7001 | 7.083858 | CGTGGAAAGAACAATTTGACATATGT | 58.916 | 34.615 | 8.43 | 8.43 | 0.00 | 2.29 |
4369 | 7002 | 8.233868 | CGTGGAAAGAACAATTTGACATATGTA | 58.766 | 33.333 | 8.71 | 0.00 | 0.00 | 2.29 |
4384 | 7017 | 8.073467 | TGACATATGTATGGAAAGTCACTACA | 57.927 | 34.615 | 8.71 | 0.00 | 38.00 | 2.74 |
4467 | 7107 | 4.127171 | GCAGCATATATACCCATAACCGG | 58.873 | 47.826 | 0.00 | 0.00 | 0.00 | 5.28 |
4469 | 7109 | 5.454755 | GCAGCATATATACCCATAACCGGAT | 60.455 | 44.000 | 9.46 | 0.00 | 0.00 | 4.18 |
4490 | 7214 | 1.939934 | GCATATGCACGCAAGAACCTA | 59.060 | 47.619 | 22.84 | 0.00 | 41.59 | 3.08 |
4498 | 7222 | 3.390135 | CACGCAAGAACCTAGTGAGAAA | 58.610 | 45.455 | 0.00 | 0.00 | 43.62 | 2.52 |
4501 | 7225 | 3.997021 | CGCAAGAACCTAGTGAGAAATGT | 59.003 | 43.478 | 0.00 | 0.00 | 43.02 | 2.71 |
4532 | 7256 | 6.255887 | CGTCTGAAGAAACAAACTAGTCACTT | 59.744 | 38.462 | 0.00 | 0.00 | 0.00 | 3.16 |
4544 | 7268 | 1.140312 | AGTCACTTCTGGGAGGCAAA | 58.860 | 50.000 | 0.00 | 0.00 | 0.00 | 3.68 |
4545 | 7269 | 1.202818 | AGTCACTTCTGGGAGGCAAAC | 60.203 | 52.381 | 0.00 | 0.00 | 0.00 | 2.93 |
4547 | 7271 | 0.250295 | CACTTCTGGGAGGCAAACGA | 60.250 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
4548 | 7272 | 0.472471 | ACTTCTGGGAGGCAAACGAA | 59.528 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
4549 | 7273 | 1.073923 | ACTTCTGGGAGGCAAACGAAT | 59.926 | 47.619 | 0.00 | 0.00 | 0.00 | 3.34 |
4601 | 7359 | 6.447162 | TGCGGACATATAGAATACACAAGAG | 58.553 | 40.000 | 0.00 | 0.00 | 0.00 | 2.85 |
4667 | 7425 | 8.434589 | AAAATGGGGAAATAGAATCACTGAAA | 57.565 | 30.769 | 0.00 | 0.00 | 0.00 | 2.69 |
4708 | 7466 | 4.082733 | CGAGGCTAATAGCACACTATAGCA | 60.083 | 45.833 | 14.76 | 0.00 | 44.75 | 3.49 |
4720 | 7478 | 7.923888 | AGCACACTATAGCATGTAGAAAATTG | 58.076 | 34.615 | 0.00 | 0.00 | 0.00 | 2.32 |
4724 | 7482 | 9.319143 | ACACTATAGCATGTAGAAAATTGTCTC | 57.681 | 33.333 | 0.00 | 0.00 | 0.00 | 3.36 |
4762 | 7520 | 8.425577 | AATGTACAATGTCTCACTAATAGCAC | 57.574 | 34.615 | 0.00 | 0.00 | 0.00 | 4.40 |
4763 | 7521 | 6.930731 | TGTACAATGTCTCACTAATAGCACA | 58.069 | 36.000 | 0.00 | 0.00 | 0.00 | 4.57 |
4764 | 7522 | 6.811665 | TGTACAATGTCTCACTAATAGCACAC | 59.188 | 38.462 | 0.00 | 0.00 | 0.00 | 3.82 |
4771 | 7529 | 6.081049 | GTCTCACTAATAGCACACTATAGCG | 58.919 | 44.000 | 0.00 | 0.00 | 38.18 | 4.26 |
4773 | 7531 | 4.277423 | TCACTAATAGCACACTATAGCGCA | 59.723 | 41.667 | 11.47 | 0.00 | 38.18 | 6.09 |
4774 | 7532 | 4.383052 | CACTAATAGCACACTATAGCGCAC | 59.617 | 45.833 | 11.47 | 0.00 | 38.18 | 5.34 |
4783 | 7541 | 4.982295 | CACACTATAGCGCACTTTAGCATA | 59.018 | 41.667 | 11.47 | 0.00 | 32.41 | 3.14 |
4787 | 7545 | 7.030165 | CACTATAGCGCACTTTAGCATACTAT | 58.970 | 38.462 | 11.47 | 0.00 | 32.41 | 2.12 |
4788 | 7546 | 8.182227 | CACTATAGCGCACTTTAGCATACTATA | 58.818 | 37.037 | 11.47 | 0.00 | 32.41 | 1.31 |
4790 | 7548 | 9.737427 | CTATAGCGCACTTTAGCATACTATAAT | 57.263 | 33.333 | 11.47 | 0.00 | 31.95 | 1.28 |
4792 | 7550 | 9.737427 | ATAGCGCACTTTAGCATACTATAATAG | 57.263 | 33.333 | 11.47 | 0.00 | 35.48 | 1.73 |
4794 | 7552 | 6.310467 | GCGCACTTTAGCATACTATAATAGCA | 59.690 | 38.462 | 0.30 | 0.00 | 0.00 | 3.49 |
4795 | 7553 | 7.667283 | CGCACTTTAGCATACTATAATAGCAC | 58.333 | 38.462 | 0.00 | 0.00 | 0.00 | 4.40 |
4796 | 7554 | 7.328493 | CGCACTTTAGCATACTATAATAGCACA | 59.672 | 37.037 | 0.00 | 0.00 | 0.00 | 4.57 |
4797 | 7555 | 8.988934 | GCACTTTAGCATACTATAATAGCACAA | 58.011 | 33.333 | 0.00 | 0.00 | 0.00 | 3.33 |
4809 | 7567 | 6.877611 | ATAATAGCACAATTTAAGGGACGG | 57.122 | 37.500 | 0.00 | 0.00 | 0.00 | 4.79 |
4810 | 7568 | 2.579410 | AGCACAATTTAAGGGACGGT | 57.421 | 45.000 | 0.00 | 0.00 | 0.00 | 4.83 |
4835 | 7593 | 6.249478 | CTATTCTGTATAGCGCGCTATTTC | 57.751 | 41.667 | 46.76 | 37.61 | 39.65 | 2.17 |
4845 | 7603 | 2.177173 | CGCGCTATTTCTTTTCCTTGC | 58.823 | 47.619 | 5.56 | 0.00 | 0.00 | 4.01 |
4849 | 7607 | 5.523369 | GCGCTATTTCTTTTCCTTGCATAT | 58.477 | 37.500 | 0.00 | 0.00 | 0.00 | 1.78 |
4901 | 7659 | 7.094762 | ACCTAGAAAATCAGAAAATCGGTTGTC | 60.095 | 37.037 | 0.00 | 0.00 | 0.00 | 3.18 |
4902 | 7660 | 6.884280 | AGAAAATCAGAAAATCGGTTGTCT | 57.116 | 33.333 | 0.00 | 0.00 | 0.00 | 3.41 |
4907 | 7665 | 3.071023 | TCAGAAAATCGGTTGTCTGGAGT | 59.929 | 43.478 | 25.04 | 0.00 | 38.42 | 3.85 |
4931 | 7689 | 8.091449 | AGTGATAAGTCTTGTACTCTTTGGAAG | 58.909 | 37.037 | 0.00 | 0.00 | 37.50 | 3.46 |
4940 | 7698 | 1.705745 | ACTCTTTGGAAGAACCCCCTC | 59.294 | 52.381 | 0.00 | 0.00 | 37.02 | 4.30 |
4941 | 7699 | 1.004862 | CTCTTTGGAAGAACCCCCTCC | 59.995 | 57.143 | 0.00 | 0.00 | 37.02 | 4.30 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
130 | 131 | 1.556911 | CCACTCCTGGCTGTACAAGAT | 59.443 | 52.381 | 0.00 | 0.00 | 0.00 | 2.40 |
143 | 144 | 0.104934 | ACCCTGTCTTGTCCACTCCT | 60.105 | 55.000 | 0.00 | 0.00 | 0.00 | 3.69 |
148 | 149 | 1.074090 | TCCCACCCTGTCTTGTCCA | 60.074 | 57.895 | 0.00 | 0.00 | 0.00 | 4.02 |
302 | 306 | 5.742453 | GCATGAGCTTGATTTTGACAGTATG | 59.258 | 40.000 | 0.00 | 0.00 | 39.32 | 2.39 |
305 | 309 | 3.057033 | GGCATGAGCTTGATTTTGACAGT | 60.057 | 43.478 | 0.00 | 0.00 | 41.70 | 3.55 |
371 | 492 | 6.638096 | TGATTAGGATACATGCATTTGGTG | 57.362 | 37.500 | 0.00 | 0.00 | 41.41 | 4.17 |
372 | 493 | 7.288389 | ACATTGATTAGGATACATGCATTTGGT | 59.712 | 33.333 | 0.00 | 0.00 | 41.41 | 3.67 |
373 | 494 | 7.663827 | ACATTGATTAGGATACATGCATTTGG | 58.336 | 34.615 | 0.00 | 0.00 | 41.41 | 3.28 |
374 | 495 | 9.537192 | AAACATTGATTAGGATACATGCATTTG | 57.463 | 29.630 | 0.00 | 0.00 | 41.41 | 2.32 |
385 | 506 | 8.576442 | CCCGCTATTTAAAACATTGATTAGGAT | 58.424 | 33.333 | 0.00 | 0.00 | 0.00 | 3.24 |
386 | 507 | 7.469456 | GCCCGCTATTTAAAACATTGATTAGGA | 60.469 | 37.037 | 0.00 | 0.00 | 0.00 | 2.94 |
387 | 508 | 6.640907 | GCCCGCTATTTAAAACATTGATTAGG | 59.359 | 38.462 | 0.00 | 0.00 | 0.00 | 2.69 |
388 | 509 | 7.425606 | AGCCCGCTATTTAAAACATTGATTAG | 58.574 | 34.615 | 0.00 | 0.00 | 0.00 | 1.73 |
389 | 510 | 7.341445 | AGCCCGCTATTTAAAACATTGATTA | 57.659 | 32.000 | 0.00 | 0.00 | 0.00 | 1.75 |
390 | 511 | 6.220726 | AGCCCGCTATTTAAAACATTGATT | 57.779 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
391 | 512 | 5.852282 | AGCCCGCTATTTAAAACATTGAT | 57.148 | 34.783 | 0.00 | 0.00 | 0.00 | 2.57 |
392 | 513 | 6.238897 | CCATAGCCCGCTATTTAAAACATTGA | 60.239 | 38.462 | 6.48 | 0.00 | 37.16 | 2.57 |
393 | 514 | 5.920273 | CCATAGCCCGCTATTTAAAACATTG | 59.080 | 40.000 | 6.48 | 0.00 | 37.16 | 2.82 |
394 | 515 | 5.830991 | TCCATAGCCCGCTATTTAAAACATT | 59.169 | 36.000 | 6.48 | 0.00 | 37.16 | 2.71 |
395 | 516 | 5.381757 | TCCATAGCCCGCTATTTAAAACAT | 58.618 | 37.500 | 6.48 | 0.00 | 37.16 | 2.71 |
396 | 517 | 4.783055 | TCCATAGCCCGCTATTTAAAACA | 58.217 | 39.130 | 6.48 | 0.00 | 37.16 | 2.83 |
397 | 518 | 5.761165 | TTCCATAGCCCGCTATTTAAAAC | 57.239 | 39.130 | 6.48 | 0.00 | 37.16 | 2.43 |
398 | 519 | 6.777213 | TTTTCCATAGCCCGCTATTTAAAA | 57.223 | 33.333 | 6.48 | 12.19 | 37.16 | 1.52 |
399 | 520 | 6.969993 | ATTTTCCATAGCCCGCTATTTAAA | 57.030 | 33.333 | 6.48 | 7.56 | 37.16 | 1.52 |
400 | 521 | 6.150474 | GCTATTTTCCATAGCCCGCTATTTAA | 59.850 | 38.462 | 6.48 | 2.15 | 40.69 | 1.52 |
401 | 522 | 5.646360 | GCTATTTTCCATAGCCCGCTATTTA | 59.354 | 40.000 | 6.48 | 0.00 | 40.69 | 1.40 |
402 | 523 | 4.459337 | GCTATTTTCCATAGCCCGCTATTT | 59.541 | 41.667 | 6.48 | 0.00 | 40.69 | 1.40 |
403 | 524 | 4.010349 | GCTATTTTCCATAGCCCGCTATT | 58.990 | 43.478 | 6.48 | 0.00 | 40.69 | 1.73 |
404 | 525 | 3.610911 | GCTATTTTCCATAGCCCGCTAT | 58.389 | 45.455 | 3.31 | 3.31 | 40.69 | 2.97 |
405 | 526 | 2.611971 | CGCTATTTTCCATAGCCCGCTA | 60.612 | 50.000 | 8.01 | 0.00 | 42.89 | 4.26 |
406 | 527 | 1.878102 | CGCTATTTTCCATAGCCCGCT | 60.878 | 52.381 | 8.01 | 0.00 | 42.89 | 5.52 |
407 | 528 | 0.517316 | CGCTATTTTCCATAGCCCGC | 59.483 | 55.000 | 8.01 | 0.00 | 42.89 | 6.13 |
408 | 529 | 1.156736 | CCGCTATTTTCCATAGCCCG | 58.843 | 55.000 | 8.01 | 0.00 | 42.89 | 6.13 |
409 | 530 | 0.881796 | GCCGCTATTTTCCATAGCCC | 59.118 | 55.000 | 8.01 | 0.00 | 42.89 | 5.19 |
410 | 531 | 0.517316 | CGCCGCTATTTTCCATAGCC | 59.483 | 55.000 | 8.01 | 0.00 | 42.89 | 3.93 |
411 | 532 | 0.517316 | CCGCCGCTATTTTCCATAGC | 59.483 | 55.000 | 4.08 | 4.08 | 42.53 | 2.97 |
412 | 533 | 1.156736 | CCCGCCGCTATTTTCCATAG | 58.843 | 55.000 | 0.00 | 0.00 | 0.00 | 2.23 |
413 | 534 | 0.887387 | GCCCGCCGCTATTTTCCATA | 60.887 | 55.000 | 0.00 | 0.00 | 0.00 | 2.74 |
414 | 535 | 2.193536 | GCCCGCCGCTATTTTCCAT | 61.194 | 57.895 | 0.00 | 0.00 | 0.00 | 3.41 |
415 | 536 | 2.826738 | GCCCGCCGCTATTTTCCA | 60.827 | 61.111 | 0.00 | 0.00 | 0.00 | 3.53 |
416 | 537 | 3.592814 | GGCCCGCCGCTATTTTCC | 61.593 | 66.667 | 0.00 | 0.00 | 37.74 | 3.13 |
417 | 538 | 2.516225 | AGGCCCGCCGCTATTTTC | 60.516 | 61.111 | 0.00 | 0.00 | 41.95 | 2.29 |
418 | 539 | 2.516225 | GAGGCCCGCCGCTATTTT | 60.516 | 61.111 | 0.00 | 0.00 | 41.95 | 1.82 |
419 | 540 | 4.564110 | GGAGGCCCGCCGCTATTT | 62.564 | 66.667 | 9.41 | 0.00 | 41.95 | 1.40 |
425 | 546 | 4.794648 | TGATTTGGAGGCCCGCCG | 62.795 | 66.667 | 0.00 | 0.00 | 41.95 | 6.46 |
426 | 547 | 2.830370 | CTGATTTGGAGGCCCGCC | 60.830 | 66.667 | 0.00 | 1.12 | 34.29 | 6.13 |
427 | 548 | 2.608970 | TAGCTGATTTGGAGGCCCGC | 62.609 | 60.000 | 0.00 | 0.00 | 34.29 | 6.13 |
428 | 549 | 0.109342 | ATAGCTGATTTGGAGGCCCG | 59.891 | 55.000 | 0.00 | 0.00 | 34.29 | 6.13 |
429 | 550 | 3.149981 | GTTATAGCTGATTTGGAGGCCC | 58.850 | 50.000 | 0.00 | 0.00 | 0.00 | 5.80 |
430 | 551 | 2.808543 | CGTTATAGCTGATTTGGAGGCC | 59.191 | 50.000 | 0.00 | 0.00 | 0.00 | 5.19 |
431 | 552 | 2.808543 | CCGTTATAGCTGATTTGGAGGC | 59.191 | 50.000 | 0.00 | 0.00 | 0.00 | 4.70 |
432 | 553 | 3.403038 | CCCGTTATAGCTGATTTGGAGG | 58.597 | 50.000 | 0.00 | 0.00 | 0.00 | 4.30 |
433 | 554 | 2.808543 | GCCCGTTATAGCTGATTTGGAG | 59.191 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
434 | 555 | 2.438021 | AGCCCGTTATAGCTGATTTGGA | 59.562 | 45.455 | 0.00 | 0.00 | 38.11 | 3.53 |
435 | 556 | 2.851195 | AGCCCGTTATAGCTGATTTGG | 58.149 | 47.619 | 0.00 | 0.00 | 38.11 | 3.28 |
436 | 557 | 5.560953 | GCTTTAGCCCGTTATAGCTGATTTG | 60.561 | 44.000 | 0.00 | 0.00 | 40.28 | 2.32 |
437 | 558 | 4.515567 | GCTTTAGCCCGTTATAGCTGATTT | 59.484 | 41.667 | 0.00 | 0.00 | 40.28 | 2.17 |
438 | 559 | 4.065789 | GCTTTAGCCCGTTATAGCTGATT | 58.934 | 43.478 | 0.00 | 0.00 | 40.28 | 2.57 |
439 | 560 | 3.665190 | GCTTTAGCCCGTTATAGCTGAT | 58.335 | 45.455 | 0.00 | 0.00 | 40.28 | 2.90 |
440 | 561 | 2.545113 | CGCTTTAGCCCGTTATAGCTGA | 60.545 | 50.000 | 0.00 | 0.00 | 40.28 | 4.26 |
441 | 562 | 1.792949 | CGCTTTAGCCCGTTATAGCTG | 59.207 | 52.381 | 0.00 | 0.00 | 40.28 | 4.24 |
442 | 563 | 1.270147 | CCGCTTTAGCCCGTTATAGCT | 60.270 | 52.381 | 0.00 | 0.00 | 43.20 | 3.32 |
443 | 564 | 1.145803 | CCGCTTTAGCCCGTTATAGC | 58.854 | 55.000 | 0.00 | 0.00 | 37.91 | 2.97 |
444 | 565 | 1.792006 | CCCGCTTTAGCCCGTTATAG | 58.208 | 55.000 | 0.00 | 0.00 | 37.91 | 1.31 |
445 | 566 | 0.249996 | GCCCGCTTTAGCCCGTTATA | 60.250 | 55.000 | 0.00 | 0.00 | 37.91 | 0.98 |
446 | 567 | 1.525306 | GCCCGCTTTAGCCCGTTAT | 60.525 | 57.895 | 0.00 | 0.00 | 37.91 | 1.89 |
447 | 568 | 1.329171 | TAGCCCGCTTTAGCCCGTTA | 61.329 | 55.000 | 0.00 | 0.00 | 37.91 | 3.18 |
448 | 569 | 1.979619 | ATAGCCCGCTTTAGCCCGTT | 61.980 | 55.000 | 0.00 | 0.00 | 37.91 | 4.44 |
449 | 570 | 1.979619 | AATAGCCCGCTTTAGCCCGT | 61.980 | 55.000 | 0.00 | 0.00 | 37.91 | 5.28 |
450 | 571 | 0.818040 | AAATAGCCCGCTTTAGCCCG | 60.818 | 55.000 | 0.00 | 0.00 | 37.91 | 6.13 |
451 | 572 | 2.265589 | TAAATAGCCCGCTTTAGCCC | 57.734 | 50.000 | 0.00 | 0.00 | 37.91 | 5.19 |
452 | 573 | 3.408634 | TCATAAATAGCCCGCTTTAGCC | 58.591 | 45.455 | 0.00 | 0.00 | 37.91 | 3.93 |
453 | 574 | 4.083271 | CCTTCATAAATAGCCCGCTTTAGC | 60.083 | 45.833 | 0.00 | 0.00 | 37.78 | 3.09 |
454 | 575 | 4.083271 | GCCTTCATAAATAGCCCGCTTTAG | 60.083 | 45.833 | 0.00 | 0.00 | 0.00 | 1.85 |
455 | 576 | 3.818773 | GCCTTCATAAATAGCCCGCTTTA | 59.181 | 43.478 | 0.00 | 0.00 | 0.00 | 1.85 |
456 | 577 | 2.623416 | GCCTTCATAAATAGCCCGCTTT | 59.377 | 45.455 | 0.00 | 0.00 | 0.00 | 3.51 |
457 | 578 | 2.230660 | GCCTTCATAAATAGCCCGCTT | 58.769 | 47.619 | 0.00 | 0.00 | 0.00 | 4.68 |
458 | 579 | 1.142870 | TGCCTTCATAAATAGCCCGCT | 59.857 | 47.619 | 0.00 | 0.00 | 0.00 | 5.52 |
459 | 580 | 1.537202 | CTGCCTTCATAAATAGCCCGC | 59.463 | 52.381 | 0.00 | 0.00 | 0.00 | 6.13 |
460 | 581 | 2.808543 | GACTGCCTTCATAAATAGCCCG | 59.191 | 50.000 | 0.00 | 0.00 | 0.00 | 6.13 |
461 | 582 | 3.820557 | TGACTGCCTTCATAAATAGCCC | 58.179 | 45.455 | 0.00 | 0.00 | 0.00 | 5.19 |
462 | 583 | 6.396829 | AAATGACTGCCTTCATAAATAGCC | 57.603 | 37.500 | 0.00 | 0.00 | 35.02 | 3.93 |
463 | 584 | 8.072567 | CACTAAATGACTGCCTTCATAAATAGC | 58.927 | 37.037 | 0.00 | 0.00 | 35.02 | 2.97 |
464 | 585 | 8.562892 | CCACTAAATGACTGCCTTCATAAATAG | 58.437 | 37.037 | 0.00 | 4.79 | 35.02 | 1.73 |
465 | 586 | 7.013274 | GCCACTAAATGACTGCCTTCATAAATA | 59.987 | 37.037 | 0.00 | 0.00 | 35.02 | 1.40 |
466 | 587 | 6.183360 | GCCACTAAATGACTGCCTTCATAAAT | 60.183 | 38.462 | 0.00 | 0.00 | 35.02 | 1.40 |
467 | 588 | 5.125417 | GCCACTAAATGACTGCCTTCATAAA | 59.875 | 40.000 | 0.00 | 0.00 | 35.02 | 1.40 |
468 | 589 | 4.640201 | GCCACTAAATGACTGCCTTCATAA | 59.360 | 41.667 | 0.00 | 0.00 | 35.02 | 1.90 |
469 | 590 | 4.199310 | GCCACTAAATGACTGCCTTCATA | 58.801 | 43.478 | 0.00 | 0.00 | 35.02 | 2.15 |
470 | 591 | 3.019564 | GCCACTAAATGACTGCCTTCAT | 58.980 | 45.455 | 0.00 | 0.00 | 37.87 | 2.57 |
471 | 592 | 2.224744 | TGCCACTAAATGACTGCCTTCA | 60.225 | 45.455 | 0.00 | 0.00 | 0.00 | 3.02 |
472 | 593 | 2.162408 | GTGCCACTAAATGACTGCCTTC | 59.838 | 50.000 | 0.00 | 0.00 | 0.00 | 3.46 |
473 | 594 | 2.162681 | GTGCCACTAAATGACTGCCTT | 58.837 | 47.619 | 0.00 | 0.00 | 0.00 | 4.35 |
474 | 595 | 1.614317 | GGTGCCACTAAATGACTGCCT | 60.614 | 52.381 | 0.00 | 0.00 | 0.00 | 4.75 |
475 | 596 | 0.811281 | GGTGCCACTAAATGACTGCC | 59.189 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
476 | 597 | 0.811281 | GGGTGCCACTAAATGACTGC | 59.189 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
477 | 598 | 2.086869 | CAGGGTGCCACTAAATGACTG | 58.913 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
478 | 599 | 1.614317 | GCAGGGTGCCACTAAATGACT | 60.614 | 52.381 | 0.00 | 0.00 | 37.42 | 3.41 |
479 | 600 | 0.811281 | GCAGGGTGCCACTAAATGAC | 59.189 | 55.000 | 0.00 | 0.00 | 37.42 | 3.06 |
480 | 601 | 0.698238 | AGCAGGGTGCCACTAAATGA | 59.302 | 50.000 | 0.00 | 0.00 | 46.52 | 2.57 |
481 | 602 | 0.813184 | CAGCAGGGTGCCACTAAATG | 59.187 | 55.000 | 0.00 | 0.00 | 46.52 | 2.32 |
482 | 603 | 0.698238 | TCAGCAGGGTGCCACTAAAT | 59.302 | 50.000 | 0.00 | 0.00 | 46.52 | 1.40 |
483 | 604 | 0.476338 | TTCAGCAGGGTGCCACTAAA | 59.524 | 50.000 | 0.00 | 0.00 | 46.52 | 1.85 |
484 | 605 | 0.476338 | TTTCAGCAGGGTGCCACTAA | 59.524 | 50.000 | 0.00 | 0.00 | 46.52 | 2.24 |
485 | 606 | 0.476338 | TTTTCAGCAGGGTGCCACTA | 59.524 | 50.000 | 0.00 | 0.00 | 46.52 | 2.74 |
486 | 607 | 0.825010 | CTTTTCAGCAGGGTGCCACT | 60.825 | 55.000 | 0.00 | 0.00 | 46.52 | 4.00 |
487 | 608 | 1.662044 | CTTTTCAGCAGGGTGCCAC | 59.338 | 57.895 | 0.00 | 0.00 | 46.52 | 5.01 |
488 | 609 | 1.531365 | CCTTTTCAGCAGGGTGCCA | 60.531 | 57.895 | 0.00 | 0.00 | 46.52 | 4.92 |
489 | 610 | 2.935740 | GCCTTTTCAGCAGGGTGCC | 61.936 | 63.158 | 0.00 | 0.00 | 46.52 | 5.01 |
490 | 611 | 0.609131 | TAGCCTTTTCAGCAGGGTGC | 60.609 | 55.000 | 2.17 | 0.00 | 42.32 | 5.01 |
491 | 612 | 2.134789 | ATAGCCTTTTCAGCAGGGTG | 57.865 | 50.000 | 2.17 | 0.00 | 42.32 | 4.61 |
492 | 613 | 2.422093 | GCTATAGCCTTTTCAGCAGGGT | 60.422 | 50.000 | 14.13 | 0.00 | 44.56 | 4.34 |
493 | 614 | 2.225467 | GCTATAGCCTTTTCAGCAGGG | 58.775 | 52.381 | 14.13 | 0.00 | 34.31 | 4.45 |
494 | 615 | 1.869767 | CGCTATAGCCTTTTCAGCAGG | 59.130 | 52.381 | 19.00 | 0.00 | 37.91 | 4.85 |
495 | 616 | 1.869767 | CCGCTATAGCCTTTTCAGCAG | 59.130 | 52.381 | 19.00 | 0.81 | 37.91 | 4.24 |
496 | 617 | 1.475034 | CCCGCTATAGCCTTTTCAGCA | 60.475 | 52.381 | 19.00 | 0.00 | 37.91 | 4.41 |
497 | 618 | 1.230324 | CCCGCTATAGCCTTTTCAGC | 58.770 | 55.000 | 19.00 | 0.00 | 37.91 | 4.26 |
498 | 619 | 2.622064 | ACCCGCTATAGCCTTTTCAG | 57.378 | 50.000 | 19.00 | 2.99 | 37.91 | 3.02 |
499 | 620 | 4.699925 | ATAACCCGCTATAGCCTTTTCA | 57.300 | 40.909 | 19.00 | 0.91 | 37.91 | 2.69 |
500 | 621 | 4.630505 | GCTATAACCCGCTATAGCCTTTTC | 59.369 | 45.833 | 19.00 | 0.00 | 45.92 | 2.29 |
501 | 622 | 4.576879 | GCTATAACCCGCTATAGCCTTTT | 58.423 | 43.478 | 19.00 | 11.09 | 45.92 | 2.27 |
502 | 623 | 4.203654 | GCTATAACCCGCTATAGCCTTT | 57.796 | 45.455 | 19.00 | 11.42 | 45.92 | 3.11 |
503 | 624 | 3.889520 | GCTATAACCCGCTATAGCCTT | 57.110 | 47.619 | 19.00 | 10.09 | 45.92 | 4.35 |
507 | 628 | 3.128938 | AGCTTCGCTATAACCCGCTATAG | 59.871 | 47.826 | 0.00 | 0.00 | 36.99 | 1.31 |
508 | 629 | 3.087031 | AGCTTCGCTATAACCCGCTATA | 58.913 | 45.455 | 0.00 | 0.00 | 36.99 | 1.31 |
509 | 630 | 1.893801 | AGCTTCGCTATAACCCGCTAT | 59.106 | 47.619 | 0.00 | 0.00 | 36.99 | 2.97 |
510 | 631 | 1.325355 | AGCTTCGCTATAACCCGCTA | 58.675 | 50.000 | 0.00 | 0.00 | 36.99 | 4.26 |
511 | 632 | 1.325355 | TAGCTTCGCTATAACCCGCT | 58.675 | 50.000 | 0.00 | 0.00 | 40.44 | 5.52 |
512 | 633 | 3.879912 | TAGCTTCGCTATAACCCGC | 57.120 | 52.632 | 0.00 | 0.00 | 40.44 | 6.13 |
520 | 641 | 0.894184 | AGCCGGCTATAGCTTCGCTA | 60.894 | 55.000 | 31.86 | 0.00 | 45.55 | 4.26 |
521 | 642 | 0.894184 | TAGCCGGCTATAGCTTCGCT | 60.894 | 55.000 | 32.24 | 25.87 | 43.41 | 4.93 |
522 | 643 | 0.173708 | ATAGCCGGCTATAGCTTCGC | 59.826 | 55.000 | 41.03 | 20.23 | 40.56 | 4.70 |
523 | 644 | 2.656560 | AATAGCCGGCTATAGCTTCG | 57.343 | 50.000 | 41.53 | 18.50 | 40.56 | 3.79 |
524 | 645 | 6.427242 | AGTTTTAAATAGCCGGCTATAGCTTC | 59.573 | 38.462 | 41.53 | 29.01 | 40.56 | 3.86 |
525 | 646 | 6.296803 | AGTTTTAAATAGCCGGCTATAGCTT | 58.703 | 36.000 | 41.53 | 33.42 | 40.56 | 3.74 |
526 | 647 | 5.866207 | AGTTTTAAATAGCCGGCTATAGCT | 58.134 | 37.500 | 41.53 | 30.55 | 43.20 | 3.32 |
527 | 648 | 7.548075 | TCATAGTTTTAAATAGCCGGCTATAGC | 59.452 | 37.037 | 41.53 | 29.09 | 38.20 | 2.97 |
528 | 649 | 8.997621 | TCATAGTTTTAAATAGCCGGCTATAG | 57.002 | 34.615 | 41.53 | 22.50 | 38.20 | 1.31 |
529 | 650 | 9.595823 | GATCATAGTTTTAAATAGCCGGCTATA | 57.404 | 33.333 | 41.53 | 28.18 | 38.20 | 1.31 |
530 | 651 | 7.553044 | GGATCATAGTTTTAAATAGCCGGCTAT | 59.447 | 37.037 | 37.79 | 37.79 | 40.63 | 2.97 |
531 | 652 | 6.877322 | GGATCATAGTTTTAAATAGCCGGCTA | 59.123 | 38.462 | 36.88 | 36.88 | 0.00 | 3.93 |
532 | 653 | 5.705905 | GGATCATAGTTTTAAATAGCCGGCT | 59.294 | 40.000 | 34.85 | 34.85 | 0.00 | 5.52 |
533 | 654 | 5.705905 | AGGATCATAGTTTTAAATAGCCGGC | 59.294 | 40.000 | 21.89 | 21.89 | 0.00 | 6.13 |
534 | 655 | 6.934645 | TCAGGATCATAGTTTTAAATAGCCGG | 59.065 | 38.462 | 0.00 | 0.00 | 0.00 | 6.13 |
535 | 656 | 7.962964 | TCAGGATCATAGTTTTAAATAGCCG | 57.037 | 36.000 | 0.00 | 0.00 | 0.00 | 5.52 |
564 | 685 | 9.170734 | GCTTCAGGCATCTTTATATATGATTCA | 57.829 | 33.333 | 0.00 | 0.00 | 41.35 | 2.57 |
582 | 703 | 1.000060 | TGCAAAGTTGATGCTTCAGGC | 60.000 | 47.619 | 2.23 | 4.42 | 44.14 | 4.85 |
583 | 704 | 3.587797 | ATGCAAAGTTGATGCTTCAGG | 57.412 | 42.857 | 2.23 | 0.00 | 44.14 | 3.86 |
584 | 705 | 8.132995 | TGAATATATGCAAAGTTGATGCTTCAG | 58.867 | 33.333 | 2.23 | 0.00 | 44.14 | 3.02 |
585 | 706 | 7.998580 | TGAATATATGCAAAGTTGATGCTTCA | 58.001 | 30.769 | 0.00 | 0.00 | 44.14 | 3.02 |
586 | 707 | 8.347771 | TCTGAATATATGCAAAGTTGATGCTTC | 58.652 | 33.333 | 0.00 | 0.00 | 44.14 | 3.86 |
587 | 708 | 8.229253 | TCTGAATATATGCAAAGTTGATGCTT | 57.771 | 30.769 | 0.00 | 0.00 | 44.14 | 3.91 |
588 | 709 | 7.501559 | ACTCTGAATATATGCAAAGTTGATGCT | 59.498 | 33.333 | 0.00 | 0.00 | 44.14 | 3.79 |
589 | 710 | 7.590322 | CACTCTGAATATATGCAAAGTTGATGC | 59.410 | 37.037 | 0.00 | 0.00 | 44.08 | 3.91 |
590 | 711 | 7.590322 | GCACTCTGAATATATGCAAAGTTGATG | 59.410 | 37.037 | 0.00 | 0.00 | 36.30 | 3.07 |
591 | 712 | 7.283807 | TGCACTCTGAATATATGCAAAGTTGAT | 59.716 | 33.333 | 0.00 | 0.00 | 43.00 | 2.57 |
592 | 713 | 6.598850 | TGCACTCTGAATATATGCAAAGTTGA | 59.401 | 34.615 | 0.00 | 0.00 | 43.00 | 3.18 |
593 | 714 | 6.788243 | TGCACTCTGAATATATGCAAAGTTG | 58.212 | 36.000 | 0.00 | 0.00 | 43.00 | 3.16 |
599 | 720 | 4.768583 | TGTGTGCACTCTGAATATATGCA | 58.231 | 39.130 | 19.41 | 0.00 | 43.70 | 3.96 |
600 | 721 | 5.739752 | TTGTGTGCACTCTGAATATATGC | 57.260 | 39.130 | 19.41 | 0.00 | 36.81 | 3.14 |
601 | 722 | 6.963242 | GTGTTTGTGTGCACTCTGAATATATG | 59.037 | 38.462 | 19.41 | 0.00 | 33.22 | 1.78 |
734 | 1229 | 1.229820 | ACCATGGGTGCTAGGACCA | 60.230 | 57.895 | 31.63 | 19.28 | 37.80 | 4.02 |
788 | 1291 | 0.950116 | GGTATGAGCAGATGCAAGCC | 59.050 | 55.000 | 7.68 | 0.00 | 45.16 | 4.35 |
824 | 1327 | 5.917462 | GGCATTGAAAATATAGCCCACTTT | 58.083 | 37.500 | 0.00 | 0.00 | 36.17 | 2.66 |
1158 | 1830 | 4.441792 | ACAAGAAGGAATGGTGCAAAAAC | 58.558 | 39.130 | 0.00 | 0.00 | 0.00 | 2.43 |
1363 | 2037 | 5.008217 | TGTTTCCAAGGTAACGAAACATCAG | 59.992 | 40.000 | 9.80 | 0.00 | 44.25 | 2.90 |
1387 | 2061 | 2.579410 | ATTGTAACCTTGAAGCGGGT | 57.421 | 45.000 | 0.00 | 0.00 | 37.44 | 5.28 |
1545 | 2219 | 5.821470 | GCTTCCATCTGAATCTGATCTTTCA | 59.179 | 40.000 | 0.00 | 0.57 | 31.06 | 2.69 |
1684 | 2358 | 9.574516 | AATAAGTTTCAACAGTAAGAGGACATT | 57.425 | 29.630 | 0.00 | 0.00 | 0.00 | 2.71 |
2001 | 4368 | 5.345741 | CGAAACCGTCTTTCCGAAATAGTAA | 59.654 | 40.000 | 0.00 | 0.00 | 0.00 | 2.24 |
2053 | 4420 | 8.770828 | CAGAGGTTCAAACGTATTTAGAAAAGA | 58.229 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
2079 | 4446 | 2.294074 | TGCGAAGGGCCATGTATTAAC | 58.706 | 47.619 | 6.18 | 0.00 | 42.61 | 2.01 |
2134 | 4501 | 2.441750 | TGAGTAGCAAACCCTCAACCTT | 59.558 | 45.455 | 0.00 | 0.00 | 32.55 | 3.50 |
2144 | 4511 | 6.529463 | ACAATGCAAAAATGAGTAGCAAAC | 57.471 | 33.333 | 0.00 | 0.00 | 38.85 | 2.93 |
2191 | 4559 | 9.638239 | GTTTTGCAAAAATATTCTACATCAGGA | 57.362 | 29.630 | 25.40 | 0.00 | 0.00 | 3.86 |
2226 | 4594 | 0.820226 | CTCAGGTTCGGATCTCAGCA | 59.180 | 55.000 | 0.00 | 0.00 | 0.00 | 4.41 |
2376 | 4744 | 7.443879 | ACCTTAAAACCATCAAAATTTGCGAAT | 59.556 | 29.630 | 0.00 | 0.00 | 0.00 | 3.34 |
2514 | 4883 | 9.722056 | CTTCAACTGATAAGGCAACAATAATAC | 57.278 | 33.333 | 0.00 | 0.00 | 41.41 | 1.89 |
2896 | 5396 | 1.021390 | GTGTCATCCCTGCTGTTCCG | 61.021 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2967 | 5467 | 4.562143 | GGGCTGTTAAGGACGTCTTCTTAA | 60.562 | 45.833 | 16.46 | 17.24 | 36.93 | 1.85 |
2968 | 5468 | 3.056322 | GGGCTGTTAAGGACGTCTTCTTA | 60.056 | 47.826 | 16.46 | 12.34 | 36.93 | 2.10 |
2969 | 5469 | 2.289506 | GGGCTGTTAAGGACGTCTTCTT | 60.290 | 50.000 | 16.46 | 13.36 | 36.93 | 2.52 |
2970 | 5470 | 1.275573 | GGGCTGTTAAGGACGTCTTCT | 59.724 | 52.381 | 16.46 | 1.50 | 36.93 | 2.85 |
2971 | 5471 | 1.001633 | TGGGCTGTTAAGGACGTCTTC | 59.998 | 52.381 | 16.46 | 0.00 | 36.93 | 2.87 |
2972 | 5472 | 1.053424 | TGGGCTGTTAAGGACGTCTT | 58.947 | 50.000 | 16.46 | 4.52 | 39.40 | 3.01 |
2973 | 5473 | 1.066143 | CATGGGCTGTTAAGGACGTCT | 60.066 | 52.381 | 16.46 | 0.00 | 0.00 | 4.18 |
2974 | 5474 | 1.338769 | ACATGGGCTGTTAAGGACGTC | 60.339 | 52.381 | 7.13 | 7.13 | 32.90 | 4.34 |
2975 | 5475 | 0.690762 | ACATGGGCTGTTAAGGACGT | 59.309 | 50.000 | 0.00 | 0.00 | 32.90 | 4.34 |
2976 | 5476 | 1.821216 | AACATGGGCTGTTAAGGACG | 58.179 | 50.000 | 0.00 | 0.00 | 46.30 | 4.79 |
2982 | 5482 | 3.186283 | TCCTCCTTAACATGGGCTGTTA | 58.814 | 45.455 | 0.00 | 0.00 | 46.30 | 2.41 |
2984 | 5484 | 1.668826 | TCCTCCTTAACATGGGCTGT | 58.331 | 50.000 | 0.00 | 0.00 | 40.84 | 4.40 |
2985 | 5485 | 2.369394 | GTTCCTCCTTAACATGGGCTG | 58.631 | 52.381 | 0.00 | 0.00 | 0.00 | 4.85 |
2986 | 5486 | 1.285078 | GGTTCCTCCTTAACATGGGCT | 59.715 | 52.381 | 0.00 | 0.00 | 0.00 | 5.19 |
2987 | 5487 | 1.005450 | TGGTTCCTCCTTAACATGGGC | 59.995 | 52.381 | 0.00 | 0.00 | 37.07 | 5.36 |
2988 | 5488 | 2.945890 | GCTGGTTCCTCCTTAACATGGG | 60.946 | 54.545 | 0.00 | 0.00 | 37.07 | 4.00 |
2989 | 5489 | 2.369394 | GCTGGTTCCTCCTTAACATGG | 58.631 | 52.381 | 0.00 | 0.00 | 37.07 | 3.66 |
2990 | 5490 | 2.290896 | TGGCTGGTTCCTCCTTAACATG | 60.291 | 50.000 | 0.00 | 0.00 | 37.07 | 3.21 |
2991 | 5491 | 1.992557 | TGGCTGGTTCCTCCTTAACAT | 59.007 | 47.619 | 0.00 | 0.00 | 37.07 | 2.71 |
3049 | 5549 | 8.602472 | AAATGTGACCCCTAAATTTTAGCATA | 57.398 | 30.769 | 10.16 | 3.02 | 0.00 | 3.14 |
3063 | 5563 | 4.039124 | ACTTTTCATGTGAAATGTGACCCC | 59.961 | 41.667 | 19.80 | 0.00 | 45.01 | 4.95 |
3130 | 5631 | 5.127194 | TCAGTAGTCTTATGTTCGCCTGAAT | 59.873 | 40.000 | 0.00 | 0.00 | 36.29 | 2.57 |
3131 | 5632 | 4.461431 | TCAGTAGTCTTATGTTCGCCTGAA | 59.539 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
3132 | 5633 | 4.014406 | TCAGTAGTCTTATGTTCGCCTGA | 58.986 | 43.478 | 0.00 | 0.00 | 0.00 | 3.86 |
3133 | 5634 | 4.106197 | GTCAGTAGTCTTATGTTCGCCTG | 58.894 | 47.826 | 0.00 | 0.00 | 0.00 | 4.85 |
3134 | 5635 | 3.762288 | TGTCAGTAGTCTTATGTTCGCCT | 59.238 | 43.478 | 0.00 | 0.00 | 0.00 | 5.52 |
3135 | 5636 | 4.106029 | TGTCAGTAGTCTTATGTTCGCC | 57.894 | 45.455 | 0.00 | 0.00 | 0.00 | 5.54 |
3136 | 5637 | 4.982999 | TCTGTCAGTAGTCTTATGTTCGC | 58.017 | 43.478 | 0.00 | 0.00 | 0.00 | 4.70 |
3137 | 5638 | 6.030849 | CCTTCTGTCAGTAGTCTTATGTTCG | 58.969 | 44.000 | 5.83 | 0.00 | 0.00 | 3.95 |
3138 | 5639 | 7.030768 | GTCCTTCTGTCAGTAGTCTTATGTTC | 58.969 | 42.308 | 5.83 | 0.00 | 0.00 | 3.18 |
3139 | 5640 | 6.493802 | TGTCCTTCTGTCAGTAGTCTTATGTT | 59.506 | 38.462 | 5.83 | 0.00 | 0.00 | 2.71 |
3140 | 5641 | 6.010850 | TGTCCTTCTGTCAGTAGTCTTATGT | 58.989 | 40.000 | 5.83 | 0.00 | 0.00 | 2.29 |
3141 | 5642 | 6.405286 | CCTGTCCTTCTGTCAGTAGTCTTATG | 60.405 | 46.154 | 5.83 | 0.00 | 0.00 | 1.90 |
3142 | 5643 | 5.654650 | CCTGTCCTTCTGTCAGTAGTCTTAT | 59.345 | 44.000 | 5.83 | 0.00 | 0.00 | 1.73 |
3143 | 5644 | 5.010933 | CCTGTCCTTCTGTCAGTAGTCTTA | 58.989 | 45.833 | 5.83 | 0.00 | 0.00 | 2.10 |
3144 | 5645 | 3.829601 | CCTGTCCTTCTGTCAGTAGTCTT | 59.170 | 47.826 | 5.83 | 0.00 | 0.00 | 3.01 |
3145 | 5646 | 3.426615 | CCTGTCCTTCTGTCAGTAGTCT | 58.573 | 50.000 | 5.83 | 0.00 | 0.00 | 3.24 |
3146 | 5647 | 2.094442 | GCCTGTCCTTCTGTCAGTAGTC | 60.094 | 54.545 | 5.83 | 0.38 | 0.00 | 2.59 |
3147 | 5648 | 1.896465 | GCCTGTCCTTCTGTCAGTAGT | 59.104 | 52.381 | 5.83 | 0.00 | 0.00 | 2.73 |
3148 | 5649 | 1.135257 | CGCCTGTCCTTCTGTCAGTAG | 60.135 | 57.143 | 0.00 | 0.00 | 0.00 | 2.57 |
3149 | 5650 | 0.888619 | CGCCTGTCCTTCTGTCAGTA | 59.111 | 55.000 | 0.00 | 0.00 | 0.00 | 2.74 |
3150 | 5651 | 1.668294 | CGCCTGTCCTTCTGTCAGT | 59.332 | 57.895 | 0.00 | 0.00 | 0.00 | 3.41 |
3151 | 5652 | 1.739562 | GCGCCTGTCCTTCTGTCAG | 60.740 | 63.158 | 0.00 | 0.00 | 0.00 | 3.51 |
3152 | 5653 | 2.038814 | TTGCGCCTGTCCTTCTGTCA | 62.039 | 55.000 | 4.18 | 0.00 | 0.00 | 3.58 |
3153 | 5654 | 0.884704 | TTTGCGCCTGTCCTTCTGTC | 60.885 | 55.000 | 4.18 | 0.00 | 0.00 | 3.51 |
3154 | 5655 | 0.886490 | CTTTGCGCCTGTCCTTCTGT | 60.886 | 55.000 | 4.18 | 0.00 | 0.00 | 3.41 |
3155 | 5656 | 0.603707 | TCTTTGCGCCTGTCCTTCTG | 60.604 | 55.000 | 4.18 | 0.00 | 0.00 | 3.02 |
3156 | 5657 | 0.603975 | GTCTTTGCGCCTGTCCTTCT | 60.604 | 55.000 | 4.18 | 0.00 | 0.00 | 2.85 |
3157 | 5658 | 1.869690 | GTCTTTGCGCCTGTCCTTC | 59.130 | 57.895 | 4.18 | 0.00 | 0.00 | 3.46 |
3158 | 5659 | 1.961277 | CGTCTTTGCGCCTGTCCTT | 60.961 | 57.895 | 4.18 | 0.00 | 0.00 | 3.36 |
3159 | 5660 | 2.357517 | CGTCTTTGCGCCTGTCCT | 60.358 | 61.111 | 4.18 | 0.00 | 0.00 | 3.85 |
3160 | 5661 | 2.357034 | TCGTCTTTGCGCCTGTCC | 60.357 | 61.111 | 4.18 | 0.00 | 0.00 | 4.02 |
3161 | 5662 | 2.853914 | GTCGTCTTTGCGCCTGTC | 59.146 | 61.111 | 4.18 | 0.00 | 0.00 | 3.51 |
3162 | 5663 | 3.036084 | CGTCGTCTTTGCGCCTGT | 61.036 | 61.111 | 4.18 | 0.00 | 0.00 | 4.00 |
3163 | 5664 | 1.279527 | TAACGTCGTCTTTGCGCCTG | 61.280 | 55.000 | 4.18 | 0.00 | 0.00 | 4.85 |
3164 | 5665 | 0.598158 | TTAACGTCGTCTTTGCGCCT | 60.598 | 50.000 | 4.18 | 0.00 | 0.00 | 5.52 |
3165 | 5666 | 0.449993 | GTTAACGTCGTCTTTGCGCC | 60.450 | 55.000 | 4.18 | 0.00 | 0.00 | 6.53 |
3166 | 5667 | 0.230260 | TGTTAACGTCGTCTTTGCGC | 59.770 | 50.000 | 0.00 | 0.00 | 0.00 | 6.09 |
3167 | 5668 | 2.471749 | GGATGTTAACGTCGTCTTTGCG | 60.472 | 50.000 | 19.12 | 0.00 | 32.78 | 4.85 |
3168 | 5669 | 2.159747 | GGGATGTTAACGTCGTCTTTGC | 60.160 | 50.000 | 19.12 | 5.77 | 32.78 | 3.68 |
3169 | 5670 | 2.091588 | CGGGATGTTAACGTCGTCTTTG | 59.908 | 50.000 | 19.12 | 4.15 | 32.78 | 2.77 |
3186 | 5687 | 0.978907 | GGTTCCTCCTTAACACGGGA | 59.021 | 55.000 | 0.00 | 0.00 | 0.00 | 5.14 |
3190 | 5691 | 2.861147 | AGCTGGTTCCTCCTTAACAC | 57.139 | 50.000 | 0.00 | 0.00 | 37.07 | 3.32 |
3294 | 5810 | 9.692325 | AAAGGATCAAGCTAAATAGATGAAACT | 57.308 | 29.630 | 0.00 | 0.00 | 0.00 | 2.66 |
3346 | 5873 | 4.840680 | TCCTCTTCAGGTCTCAAAGATGAA | 59.159 | 41.667 | 0.00 | 0.00 | 41.28 | 2.57 |
3356 | 5883 | 2.043664 | TGTCTCCATCCTCTTCAGGTCT | 59.956 | 50.000 | 0.00 | 0.00 | 41.28 | 3.85 |
3473 | 6000 | 4.395959 | AAACTGGTACTGTCGACTCAAA | 57.604 | 40.909 | 17.92 | 0.00 | 40.38 | 2.69 |
3529 | 6059 | 7.907214 | ACTTACTATTATCATGCCGGATTTC | 57.093 | 36.000 | 5.05 | 0.00 | 0.00 | 2.17 |
3677 | 6264 | 7.551617 | CCGGTAAAGTACTGTTTTTGGAGATAT | 59.448 | 37.037 | 0.00 | 0.00 | 33.14 | 1.63 |
3684 | 6271 | 3.315749 | TGCCCGGTAAAGTACTGTTTTTG | 59.684 | 43.478 | 0.00 | 0.00 | 33.14 | 2.44 |
3763 | 6358 | 4.314440 | GCAGCTCCGTGTCCCACA | 62.314 | 66.667 | 0.00 | 0.00 | 33.40 | 4.17 |
4073 | 6691 | 8.637099 | CATCCAAAGTCATTCAGAGTCTAGATA | 58.363 | 37.037 | 0.00 | 0.00 | 0.00 | 1.98 |
4074 | 6692 | 7.418827 | CCATCCAAAGTCATTCAGAGTCTAGAT | 60.419 | 40.741 | 0.00 | 0.00 | 0.00 | 1.98 |
4075 | 6693 | 6.127225 | CCATCCAAAGTCATTCAGAGTCTAGA | 60.127 | 42.308 | 0.00 | 0.00 | 0.00 | 2.43 |
4076 | 6694 | 6.047870 | CCATCCAAAGTCATTCAGAGTCTAG | 58.952 | 44.000 | 0.00 | 0.00 | 0.00 | 2.43 |
4077 | 6695 | 5.485353 | ACCATCCAAAGTCATTCAGAGTCTA | 59.515 | 40.000 | 0.00 | 0.00 | 0.00 | 2.59 |
4078 | 6696 | 4.288105 | ACCATCCAAAGTCATTCAGAGTCT | 59.712 | 41.667 | 0.00 | 0.00 | 0.00 | 3.24 |
4079 | 6697 | 4.583871 | ACCATCCAAAGTCATTCAGAGTC | 58.416 | 43.478 | 0.00 | 0.00 | 0.00 | 3.36 |
4081 | 6699 | 4.582869 | TGACCATCCAAAGTCATTCAGAG | 58.417 | 43.478 | 0.00 | 0.00 | 38.07 | 3.35 |
4082 | 6700 | 4.639078 | TGACCATCCAAAGTCATTCAGA | 57.361 | 40.909 | 0.00 | 0.00 | 38.07 | 3.27 |
4083 | 6701 | 4.763793 | ACTTGACCATCCAAAGTCATTCAG | 59.236 | 41.667 | 0.00 | 0.00 | 42.32 | 3.02 |
4084 | 6702 | 4.728772 | ACTTGACCATCCAAAGTCATTCA | 58.271 | 39.130 | 0.00 | 0.00 | 42.32 | 2.57 |
4168 | 6793 | 8.257602 | AGTTGTTCAAATTAACTTAACCCCAT | 57.742 | 30.769 | 0.00 | 0.00 | 30.98 | 4.00 |
4239 | 6866 | 2.415090 | GCTCAAGCGAAAATGCATCAGT | 60.415 | 45.455 | 0.00 | 0.00 | 37.31 | 3.41 |
4240 | 6867 | 2.182825 | GCTCAAGCGAAAATGCATCAG | 58.817 | 47.619 | 0.00 | 0.00 | 37.31 | 2.90 |
4266 | 6896 | 1.354705 | GACCCAAAGAGGCCTTAACCT | 59.645 | 52.381 | 6.77 | 0.00 | 45.04 | 3.50 |
4288 | 6918 | 5.853282 | GTCGAACCTCATTTTGTTCTTCATG | 59.147 | 40.000 | 0.00 | 0.00 | 38.93 | 3.07 |
4368 | 7001 | 6.395629 | GCTTGTACTGTAGTGACTTTCCATA | 58.604 | 40.000 | 0.00 | 0.00 | 0.00 | 2.74 |
4369 | 7002 | 5.238583 | GCTTGTACTGTAGTGACTTTCCAT | 58.761 | 41.667 | 0.00 | 0.00 | 0.00 | 3.41 |
4384 | 7017 | 0.470766 | TTGGAACGGTGGCTTGTACT | 59.529 | 50.000 | 0.00 | 0.00 | 0.00 | 2.73 |
4413 | 7052 | 2.474816 | GATACAATGTCGGTCTGGAGC | 58.525 | 52.381 | 0.00 | 0.00 | 0.00 | 4.70 |
4487 | 7211 | 6.584184 | CAGACGCATATACATTTCTCACTAGG | 59.416 | 42.308 | 0.00 | 0.00 | 0.00 | 3.02 |
4490 | 7214 | 6.149129 | TCAGACGCATATACATTTCTCACT | 57.851 | 37.500 | 0.00 | 0.00 | 0.00 | 3.41 |
4498 | 7222 | 7.334421 | AGTTTGTTTCTTCAGACGCATATACAT | 59.666 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
4501 | 7225 | 8.033038 | ACTAGTTTGTTTCTTCAGACGCATATA | 58.967 | 33.333 | 0.00 | 0.00 | 0.00 | 0.86 |
4532 | 7256 | 4.974645 | ATATATTCGTTTGCCTCCCAGA | 57.025 | 40.909 | 0.00 | 0.00 | 0.00 | 3.86 |
4601 | 7359 | 4.157289 | TCCGTTTCTAGTACACCTGATGTC | 59.843 | 45.833 | 0.00 | 0.00 | 42.09 | 3.06 |
4667 | 7425 | 3.375299 | CCTCGCTACAGCTTGCTATTTTT | 59.625 | 43.478 | 0.00 | 0.00 | 39.32 | 1.94 |
4677 | 7435 | 1.271102 | GCTATTAGCCTCGCTACAGCT | 59.729 | 52.381 | 14.71 | 0.00 | 41.89 | 4.24 |
4681 | 7439 | 2.034812 | AGTGTGCTATTAGCCTCGCTAC | 59.965 | 50.000 | 13.01 | 4.22 | 41.12 | 3.58 |
4687 | 7445 | 5.247110 | ACATGCTATAGTGTGCTATTAGCCT | 59.753 | 40.000 | 13.01 | 5.81 | 41.51 | 4.58 |
4751 | 7509 | 4.383052 | GTGCGCTATAGTGTGCTATTAGTG | 59.617 | 45.833 | 9.73 | 0.00 | 43.17 | 2.74 |
4762 | 7520 | 5.223382 | AGTATGCTAAAGTGCGCTATAGTG | 58.777 | 41.667 | 9.73 | 9.02 | 35.36 | 2.74 |
4763 | 7521 | 5.455056 | AGTATGCTAAAGTGCGCTATAGT | 57.545 | 39.130 | 9.73 | 0.00 | 35.36 | 2.12 |
4764 | 7522 | 9.737427 | ATTATAGTATGCTAAAGTGCGCTATAG | 57.263 | 33.333 | 9.73 | 6.95 | 33.50 | 1.31 |
4771 | 7529 | 8.534333 | TGTGCTATTATAGTATGCTAAAGTGC | 57.466 | 34.615 | 0.94 | 0.00 | 0.00 | 4.40 |
4783 | 7541 | 7.660208 | CCGTCCCTTAAATTGTGCTATTATAGT | 59.340 | 37.037 | 0.94 | 0.00 | 0.00 | 2.12 |
4787 | 7545 | 5.587043 | CACCGTCCCTTAAATTGTGCTATTA | 59.413 | 40.000 | 0.00 | 0.00 | 0.00 | 0.98 |
4788 | 7546 | 4.398044 | CACCGTCCCTTAAATTGTGCTATT | 59.602 | 41.667 | 0.00 | 0.00 | 0.00 | 1.73 |
4790 | 7548 | 3.340034 | CACCGTCCCTTAAATTGTGCTA | 58.660 | 45.455 | 0.00 | 0.00 | 0.00 | 3.49 |
4791 | 7549 | 2.159382 | CACCGTCCCTTAAATTGTGCT | 58.841 | 47.619 | 0.00 | 0.00 | 0.00 | 4.40 |
4792 | 7550 | 1.402325 | GCACCGTCCCTTAAATTGTGC | 60.402 | 52.381 | 0.00 | 0.00 | 40.49 | 4.57 |
4794 | 7552 | 2.579410 | AGCACCGTCCCTTAAATTGT | 57.421 | 45.000 | 0.00 | 0.00 | 0.00 | 2.71 |
4795 | 7553 | 4.881850 | AGAATAGCACCGTCCCTTAAATTG | 59.118 | 41.667 | 0.00 | 0.00 | 0.00 | 2.32 |
4796 | 7554 | 4.881850 | CAGAATAGCACCGTCCCTTAAATT | 59.118 | 41.667 | 0.00 | 0.00 | 0.00 | 1.82 |
4797 | 7555 | 4.080526 | ACAGAATAGCACCGTCCCTTAAAT | 60.081 | 41.667 | 0.00 | 0.00 | 0.00 | 1.40 |
4798 | 7556 | 3.262405 | ACAGAATAGCACCGTCCCTTAAA | 59.738 | 43.478 | 0.00 | 0.00 | 0.00 | 1.52 |
4799 | 7557 | 2.835764 | ACAGAATAGCACCGTCCCTTAA | 59.164 | 45.455 | 0.00 | 0.00 | 0.00 | 1.85 |
4800 | 7558 | 2.463752 | ACAGAATAGCACCGTCCCTTA | 58.536 | 47.619 | 0.00 | 0.00 | 0.00 | 2.69 |
4801 | 7559 | 1.276622 | ACAGAATAGCACCGTCCCTT | 58.723 | 50.000 | 0.00 | 0.00 | 0.00 | 3.95 |
4802 | 7560 | 2.154567 | TACAGAATAGCACCGTCCCT | 57.845 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
4803 | 7561 | 4.175787 | CTATACAGAATAGCACCGTCCC | 57.824 | 50.000 | 0.00 | 0.00 | 31.49 | 4.46 |
4827 | 7585 | 9.121517 | CATTATATGCAAGGAAAAGAAATAGCG | 57.878 | 33.333 | 0.00 | 0.00 | 0.00 | 4.26 |
4849 | 7607 | 7.501892 | TGTGGATGCTCAGTTTATATTGCATTA | 59.498 | 33.333 | 0.00 | 0.00 | 40.58 | 1.90 |
4859 | 7617 | 4.093743 | TCTAGGTGTGGATGCTCAGTTTA | 58.906 | 43.478 | 0.00 | 0.00 | 0.00 | 2.01 |
4901 | 7659 | 6.767524 | AGAGTACAAGACTTATCACTCCAG | 57.232 | 41.667 | 14.68 | 0.00 | 39.06 | 3.86 |
4902 | 7660 | 7.378966 | CAAAGAGTACAAGACTTATCACTCCA | 58.621 | 38.462 | 14.68 | 0.00 | 39.06 | 3.86 |
4907 | 7665 | 8.190326 | TCTTCCAAAGAGTACAAGACTTATCA | 57.810 | 34.615 | 0.00 | 0.00 | 39.06 | 2.15 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.