Multiple sequence alignment - TraesCS3A01G482900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G482900 chr3A 100.000 2414 0 0 1 2414 713419081 713416668 0.000000e+00 4458.0
1 TraesCS3A01G482900 chr3A 89.677 620 54 5 697 1311 713308514 713307900 0.000000e+00 782.0
2 TraesCS3A01G482900 chr3A 83.804 815 109 16 1308 2107 713307870 713307064 0.000000e+00 752.0
3 TraesCS3A01G482900 chr3A 82.515 835 123 18 1308 2124 713342342 713341513 0.000000e+00 712.0
4 TraesCS3A01G482900 chr3A 92.381 420 28 3 228 643 662832391 662831972 1.600000e-166 595.0
5 TraesCS3A01G482900 chr3A 88.725 408 46 0 904 1311 713342779 713342372 1.290000e-137 499.0
6 TraesCS3A01G482900 chr3A 90.984 122 11 0 3 124 713308630 713308509 5.340000e-37 165.0
7 TraesCS3A01G482900 chr3A 90.244 123 11 1 3 124 713343597 713343475 2.480000e-35 159.0
8 TraesCS3A01G482900 chr3A 88.571 105 9 1 701 805 713343477 713343376 9.060000e-25 124.0
9 TraesCS3A01G482900 chr3A 89.041 73 6 2 639 710 8671015 8671086 3.310000e-14 89.8
10 TraesCS3A01G482900 chr3A 90.769 65 6 0 638 702 681348458 681348522 1.190000e-13 87.9
11 TraesCS3A01G482900 chr3B 92.180 665 46 3 650 1311 770965028 770964367 0.000000e+00 935.0
12 TraesCS3A01G482900 chr3B 89.896 673 59 5 645 1311 771241685 771242354 0.000000e+00 857.0
13 TraesCS3A01G482900 chr3B 87.852 675 52 10 645 1311 771178151 771178803 0.000000e+00 765.0
14 TraesCS3A01G482900 chr3B 81.455 825 113 12 1308 2118 771242384 771243182 7.280000e-180 640.0
15 TraesCS3A01G482900 chr3B 92.344 418 30 2 228 643 654151243 654151660 5.750000e-166 593.0
16 TraesCS3A01G482900 chr3B 87.500 464 52 3 1308 1767 770964337 770963876 4.570000e-147 531.0
17 TraesCS3A01G482900 chr3B 97.268 183 5 0 2232 2414 623667585 623667403 6.480000e-81 311.0
18 TraesCS3A01G482900 chr3B 87.500 232 20 4 3 227 771241464 771241693 2.380000e-65 259.0
19 TraesCS3A01G482900 chr3D 91.004 667 46 4 645 1311 578040754 578041406 0.000000e+00 887.0
20 TraesCS3A01G482900 chr3D 89.552 670 55 8 647 1311 577779934 577779275 0.000000e+00 835.0
21 TraesCS3A01G482900 chr3D 84.756 820 110 10 1308 2118 577668345 577667532 0.000000e+00 808.0
22 TraesCS3A01G482900 chr3D 90.359 612 39 8 704 1311 577668970 577668375 0.000000e+00 785.0
23 TraesCS3A01G482900 chr3D 89.542 612 50 5 704 1311 577753004 577752403 0.000000e+00 763.0
24 TraesCS3A01G482900 chr3D 92.788 416 27 2 231 643 562173140 562172725 1.240000e-167 599.0
25 TraesCS3A01G482900 chr3D 91.055 436 32 5 223 652 404431545 404431111 1.240000e-162 582.0
26 TraesCS3A01G482900 chr3D 86.985 461 51 4 1308 1767 578041436 578041888 5.950000e-141 510.0
27 TraesCS3A01G482900 chr3D 82.729 469 58 4 1310 1778 577752371 577751926 1.740000e-106 396.0
28 TraesCS3A01G482900 chr3D 90.129 233 14 2 3 227 578040531 578040762 6.530000e-76 294.0
29 TraesCS3A01G482900 chr3D 88.841 233 16 3 3 227 577780158 577779928 6.570000e-71 278.0
30 TraesCS3A01G482900 chr3D 82.637 311 44 9 1829 2130 577778796 577778487 1.420000e-67 267.0
31 TraesCS3A01G482900 chr3D 81.613 310 48 5 1829 2130 577751924 577751616 5.150000e-62 248.0
32 TraesCS3A01G482900 chr3D 90.756 119 5 1 3 121 577753119 577753007 1.160000e-33 154.0
33 TraesCS3A01G482900 chr3D 93.651 63 4 0 163 225 139208925 139208863 7.100000e-16 95.3
34 TraesCS3A01G482900 chr3D 96.429 56 2 0 2176 2231 577763740 577763685 2.560000e-15 93.5
35 TraesCS3A01G482900 chr3D 94.118 51 3 0 177 227 465999723 465999773 7.160000e-11 78.7
36 TraesCS3A01G482900 chr3D 92.000 50 4 0 2182 2231 577743898 577743849 1.200000e-08 71.3
37 TraesCS3A01G482900 chr3D 86.667 60 5 3 155 213 45972000 45971943 2.000000e-06 63.9
38 TraesCS3A01G482900 chr5D 88.686 548 52 7 151 691 34796540 34795996 0.000000e+00 660.0
39 TraesCS3A01G482900 chr4B 92.399 421 28 3 227 643 468237313 468236893 4.440000e-167 597.0
40 TraesCS3A01G482900 chr4B 92.162 421 29 3 227 643 90454821 90455241 2.070000e-165 592.0
41 TraesCS3A01G482900 chr4B 97.253 182 5 0 2233 2414 40215228 40215409 2.330000e-80 309.0
42 TraesCS3A01G482900 chr4B 91.304 69 6 0 158 226 590312981 590312913 7.100000e-16 95.3
43 TraesCS3A01G482900 chr4B 90.625 64 6 0 639 702 472265993 472265930 4.280000e-13 86.1
44 TraesCS3A01G482900 chr7B 92.199 423 29 3 225 643 876793 876371 1.600000e-166 595.0
45 TraesCS3A01G482900 chr4A 92.381 420 28 3 228 643 577369225 577368806 1.600000e-166 595.0
46 TraesCS3A01G482900 chr4A 95.789 190 6 2 2225 2414 559496906 559496719 3.020000e-79 305.0
47 TraesCS3A01G482900 chr4A 92.000 75 5 1 151 225 677729369 677729296 1.180000e-18 104.0
48 TraesCS3A01G482900 chr2B 97.326 187 5 0 2228 2414 128265361 128265175 3.870000e-83 318.0
49 TraesCS3A01G482900 chr2B 97.802 182 4 0 2233 2414 77779595 77779414 5.010000e-82 315.0
50 TraesCS3A01G482900 chr2B 97.268 183 4 1 2232 2414 155942949 155943130 2.330000e-80 309.0
51 TraesCS3A01G482900 chr5B 97.790 181 4 0 2234 2414 674376472 674376652 1.800000e-81 313.0
52 TraesCS3A01G482900 chr5B 90.278 72 5 2 154 225 507613290 507613221 2.560000e-15 93.5
53 TraesCS3A01G482900 chr5B 88.158 76 9 0 152 227 442783424 442783349 9.190000e-15 91.6
54 TraesCS3A01G482900 chr5A 97.253 182 5 0 2233 2414 334341688 334341507 2.330000e-80 309.0
55 TraesCS3A01G482900 chr5A 91.667 72 6 0 156 227 696934870 696934941 1.530000e-17 100.0
56 TraesCS3A01G482900 chr1B 97.253 182 5 0 2233 2414 588322414 588322595 2.330000e-80 309.0
57 TraesCS3A01G482900 chr1B 89.474 76 8 0 152 227 397660123 397660198 1.980000e-16 97.1
58 TraesCS3A01G482900 chr6B 80.851 141 27 0 1908 2048 43072023 43071883 7.050000e-21 111.0
59 TraesCS3A01G482900 chr7D 92.105 76 4 1 150 225 619409578 619409505 3.280000e-19 106.0
60 TraesCS3A01G482900 chr7D 81.188 101 16 3 1942 2040 548140814 548140913 7.160000e-11 78.7
61 TraesCS3A01G482900 chr6A 84.211 114 8 3 121 226 27786226 27786337 4.250000e-18 102.0
62 TraesCS3A01G482900 chr6A 82.407 108 11 6 128 227 35644871 35644978 1.190000e-13 87.9
63 TraesCS3A01G482900 chr4D 84.211 114 9 7 122 227 416761856 416761744 4.250000e-18 102.0
64 TraesCS3A01G482900 chr4D 90.141 71 4 3 158 227 88478343 88478275 3.310000e-14 89.8
65 TraesCS3A01G482900 chr2D 84.071 113 10 5 122 227 157795928 157795817 4.250000e-18 102.0
66 TraesCS3A01G482900 chr2D 84.071 113 10 5 122 227 157802428 157802317 4.250000e-18 102.0
67 TraesCS3A01G482900 chr2D 93.651 63 4 0 163 225 224015483 224015421 7.100000e-16 95.3
68 TraesCS3A01G482900 chr1A 82.456 114 11 6 122 227 560464759 560464871 9.190000e-15 91.6
69 TraesCS3A01G482900 chr1A 92.063 63 5 0 163 225 63593478 63593416 3.310000e-14 89.8
70 TraesCS3A01G482900 chr1A 92.063 63 5 0 163 225 133304378 133304440 3.310000e-14 89.8
71 TraesCS3A01G482900 chr6D 94.340 53 3 0 162 214 384214339 384214287 5.530000e-12 82.4
72 TraesCS3A01G482900 chr1D 100.000 30 0 0 197 226 462886085 462886056 3.350000e-04 56.5
73 TraesCS3A01G482900 chr1D 100.000 30 0 0 197 226 462888652 462888623 3.350000e-04 56.5
74 TraesCS3A01G482900 chr1D 84.375 64 3 2 163 226 462891248 462891192 3.350000e-04 56.5
75 TraesCS3A01G482900 chr1D 84.375 64 3 2 163 226 462896362 462896306 3.350000e-04 56.5
76 TraesCS3A01G482900 chr1D 100.000 30 0 0 197 226 462898906 462898877 3.350000e-04 56.5
77 TraesCS3A01G482900 chr1D 84.375 64 3 2 163 226 462904054 462903998 3.350000e-04 56.5
78 TraesCS3A01G482900 chr1D 84.375 64 3 2 163 226 462906593 462906537 3.350000e-04 56.5
79 TraesCS3A01G482900 chr1D 84.375 64 3 2 163 226 462909137 462909081 3.350000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G482900 chr3A 713416668 713419081 2413 True 4458.000000 4458 100.000000 1 2414 1 chr3A.!!$R2 2413
1 TraesCS3A01G482900 chr3A 713307064 713308630 1566 True 566.333333 782 88.155000 3 2107 3 chr3A.!!$R3 2104
2 TraesCS3A01G482900 chr3A 713341513 713343597 2084 True 373.500000 712 87.513750 3 2124 4 chr3A.!!$R4 2121
3 TraesCS3A01G482900 chr3B 771178151 771178803 652 False 765.000000 765 87.852000 645 1311 1 chr3B.!!$F2 666
4 TraesCS3A01G482900 chr3B 770963876 770965028 1152 True 733.000000 935 89.840000 650 1767 2 chr3B.!!$R2 1117
5 TraesCS3A01G482900 chr3B 771241464 771243182 1718 False 585.333333 857 86.283667 3 2118 3 chr3B.!!$F3 2115
6 TraesCS3A01G482900 chr3D 577667532 577668970 1438 True 796.500000 808 87.557500 704 2118 2 chr3D.!!$R7 1414
7 TraesCS3A01G482900 chr3D 578040531 578041888 1357 False 563.666667 887 89.372667 3 1767 3 chr3D.!!$F2 1764
8 TraesCS3A01G482900 chr3D 577778487 577780158 1671 True 460.000000 835 87.010000 3 2130 3 chr3D.!!$R9 2127
9 TraesCS3A01G482900 chr3D 577751616 577753119 1503 True 390.250000 763 86.160000 3 2130 4 chr3D.!!$R8 2127
10 TraesCS3A01G482900 chr5D 34795996 34796540 544 True 660.000000 660 88.686000 151 691 1 chr5D.!!$R1 540

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
466 476 0.034186 TCCTCGCAGGCCATGAATTT 60.034 50.0 5.01 0.0 34.61 1.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2311 3366 0.104934 AGGTGCTCATAGGGGTAGGG 60.105 60.0 0.0 0.0 0.0 3.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
235 245 4.632153 ACATCTGTATGTAGCGGAAATCC 58.368 43.478 0.00 0.00 44.66 3.01
236 246 3.746045 TCTGTATGTAGCGGAAATCCC 57.254 47.619 0.00 0.00 0.00 3.85
237 247 3.305720 TCTGTATGTAGCGGAAATCCCT 58.694 45.455 0.00 0.00 0.00 4.20
238 248 3.709653 TCTGTATGTAGCGGAAATCCCTT 59.290 43.478 0.00 0.00 0.00 3.95
239 249 4.163458 TCTGTATGTAGCGGAAATCCCTTT 59.837 41.667 0.00 0.00 0.00 3.11
240 250 4.850680 TGTATGTAGCGGAAATCCCTTTT 58.149 39.130 0.00 0.00 0.00 2.27
241 251 4.638421 TGTATGTAGCGGAAATCCCTTTTG 59.362 41.667 0.00 0.00 0.00 2.44
242 252 2.442413 TGTAGCGGAAATCCCTTTTGG 58.558 47.619 0.00 0.00 39.97 3.28
250 260 2.351276 TCCCTTTTGGAGCTCGGC 59.649 61.111 7.83 0.00 44.07 5.54
251 261 2.751837 CCCTTTTGGAGCTCGGCC 60.752 66.667 7.83 0.00 44.07 6.13
252 262 2.352805 CCTTTTGGAGCTCGGCCT 59.647 61.111 7.83 0.00 44.07 5.19
253 263 1.746991 CCTTTTGGAGCTCGGCCTC 60.747 63.158 7.83 0.00 44.07 4.70
254 264 1.003355 CTTTTGGAGCTCGGCCTCA 60.003 57.895 7.83 0.00 33.47 3.86
255 265 0.606401 CTTTTGGAGCTCGGCCTCAA 60.606 55.000 7.83 2.82 33.47 3.02
256 266 0.606401 TTTTGGAGCTCGGCCTCAAG 60.606 55.000 7.83 0.00 33.47 3.02
257 267 1.768684 TTTGGAGCTCGGCCTCAAGT 61.769 55.000 7.83 0.00 33.47 3.16
258 268 2.125350 GGAGCTCGGCCTCAAGTG 60.125 66.667 7.83 0.00 33.47 3.16
259 269 2.650116 GGAGCTCGGCCTCAAGTGA 61.650 63.158 7.83 0.00 33.47 3.41
260 270 1.153667 GAGCTCGGCCTCAAGTGAG 60.154 63.158 0.00 0.00 41.71 3.51
270 280 2.503895 CTCAAGTGAGGCCTCCAAAT 57.496 50.000 29.95 8.92 38.48 2.32
271 281 2.800250 CTCAAGTGAGGCCTCCAAATT 58.200 47.619 29.95 14.90 38.48 1.82
272 282 2.751806 CTCAAGTGAGGCCTCCAAATTC 59.248 50.000 29.95 12.61 38.48 2.17
273 283 2.108075 TCAAGTGAGGCCTCCAAATTCA 59.892 45.455 29.95 7.46 0.00 2.57
274 284 2.892852 CAAGTGAGGCCTCCAAATTCAA 59.107 45.455 29.95 5.60 0.00 2.69
275 285 3.243359 AGTGAGGCCTCCAAATTCAAA 57.757 42.857 29.95 4.78 0.00 2.69
276 286 3.782992 AGTGAGGCCTCCAAATTCAAAT 58.217 40.909 29.95 4.85 0.00 2.32
277 287 4.162651 AGTGAGGCCTCCAAATTCAAATT 58.837 39.130 29.95 1.51 0.00 1.82
278 288 4.594491 AGTGAGGCCTCCAAATTCAAATTT 59.406 37.500 29.95 0.00 39.07 1.82
355 365 8.978874 ACAGATATAAATGAAGGCATAACACA 57.021 30.769 0.00 0.00 33.44 3.72
356 366 8.840321 ACAGATATAAATGAAGGCATAACACAC 58.160 33.333 0.00 0.00 33.44 3.82
357 367 8.839343 CAGATATAAATGAAGGCATAACACACA 58.161 33.333 0.00 0.00 33.44 3.72
358 368 9.578576 AGATATAAATGAAGGCATAACACACAT 57.421 29.630 0.00 0.00 33.44 3.21
359 369 9.616634 GATATAAATGAAGGCATAACACACATG 57.383 33.333 0.00 0.00 33.44 3.21
360 370 5.726980 AAATGAAGGCATAACACACATGT 57.273 34.783 0.00 0.00 35.25 3.21
361 371 4.707030 ATGAAGGCATAACACACATGTG 57.293 40.909 24.25 24.25 41.45 3.21
362 372 4.523943 AATGAAGGCATAACACACATGTGT 59.476 37.500 25.76 25.76 46.90 3.72
363 373 5.565242 AATGAAGGCATAACACACATGTGTG 60.565 40.000 43.01 43.01 45.44 3.82
378 388 7.984002 CACATGTGTGTAAATTTTCAGTTCA 57.016 32.000 18.03 0.00 40.96 3.18
379 389 8.404889 CACATGTGTGTAAATTTTCAGTTCAA 57.595 30.769 18.03 0.00 40.96 2.69
380 390 8.867935 CACATGTGTGTAAATTTTCAGTTCAAA 58.132 29.630 18.03 0.00 40.96 2.69
381 391 9.429359 ACATGTGTGTAAATTTTCAGTTCAAAA 57.571 25.926 0.00 0.00 36.63 2.44
386 396 9.790389 TGTGTAAATTTTCAGTTCAAAATACGT 57.210 25.926 0.00 0.00 35.35 3.57
397 407 6.677913 AGTTCAAAATACGTTGAAATGAGGG 58.322 36.000 0.00 0.00 46.28 4.30
398 408 6.264518 AGTTCAAAATACGTTGAAATGAGGGT 59.735 34.615 0.00 0.00 46.28 4.34
399 409 6.642707 TCAAAATACGTTGAAATGAGGGTT 57.357 33.333 0.00 0.00 34.59 4.11
400 410 6.442952 TCAAAATACGTTGAAATGAGGGTTG 58.557 36.000 0.00 0.00 34.59 3.77
401 411 6.039941 TCAAAATACGTTGAAATGAGGGTTGT 59.960 34.615 0.00 0.00 34.59 3.32
402 412 5.371115 AATACGTTGAAATGAGGGTTGTG 57.629 39.130 0.00 0.00 0.00 3.33
403 413 2.650322 ACGTTGAAATGAGGGTTGTGT 58.350 42.857 0.00 0.00 0.00 3.72
404 414 3.811083 ACGTTGAAATGAGGGTTGTGTA 58.189 40.909 0.00 0.00 0.00 2.90
405 415 4.200874 ACGTTGAAATGAGGGTTGTGTAA 58.799 39.130 0.00 0.00 0.00 2.41
406 416 4.641094 ACGTTGAAATGAGGGTTGTGTAAA 59.359 37.500 0.00 0.00 0.00 2.01
407 417 5.125739 ACGTTGAAATGAGGGTTGTGTAAAA 59.874 36.000 0.00 0.00 0.00 1.52
408 418 5.457473 CGTTGAAATGAGGGTTGTGTAAAAC 59.543 40.000 0.00 0.00 0.00 2.43
409 419 6.334202 GTTGAAATGAGGGTTGTGTAAAACA 58.666 36.000 0.00 0.00 36.85 2.83
410 420 6.142818 TGAAATGAGGGTTGTGTAAAACAG 57.857 37.500 0.00 0.00 40.74 3.16
411 421 5.888724 TGAAATGAGGGTTGTGTAAAACAGA 59.111 36.000 0.00 0.00 40.74 3.41
412 422 5.767816 AATGAGGGTTGTGTAAAACAGAC 57.232 39.130 0.00 0.00 40.74 3.51
413 423 4.223556 TGAGGGTTGTGTAAAACAGACA 57.776 40.909 0.00 0.00 40.74 3.41
414 424 4.590918 TGAGGGTTGTGTAAAACAGACAA 58.409 39.130 0.00 0.00 40.74 3.18
415 425 5.010933 TGAGGGTTGTGTAAAACAGACAAA 58.989 37.500 0.00 0.00 40.74 2.83
416 426 5.654650 TGAGGGTTGTGTAAAACAGACAAAT 59.345 36.000 0.00 0.00 40.74 2.32
417 427 6.144078 AGGGTTGTGTAAAACAGACAAATC 57.856 37.500 0.00 0.00 40.74 2.17
418 428 5.891551 AGGGTTGTGTAAAACAGACAAATCT 59.108 36.000 0.00 0.00 40.74 2.40
419 429 7.057894 AGGGTTGTGTAAAACAGACAAATCTA 58.942 34.615 0.00 0.00 40.74 1.98
420 430 7.228706 AGGGTTGTGTAAAACAGACAAATCTAG 59.771 37.037 0.00 0.00 40.74 2.43
421 431 7.360361 GGTTGTGTAAAACAGACAAATCTAGG 58.640 38.462 0.00 0.00 40.74 3.02
422 432 7.360361 GTTGTGTAAAACAGACAAATCTAGGG 58.640 38.462 0.00 0.00 40.74 3.53
423 433 5.472137 TGTGTAAAACAGACAAATCTAGGGC 59.528 40.000 0.00 0.00 33.78 5.19
424 434 5.705905 GTGTAAAACAGACAAATCTAGGGCT 59.294 40.000 0.00 0.00 32.25 5.19
425 435 5.705441 TGTAAAACAGACAAATCTAGGGCTG 59.295 40.000 0.00 0.00 32.25 4.85
426 436 4.373156 AAACAGACAAATCTAGGGCTGT 57.627 40.909 0.00 0.00 38.14 4.40
427 437 4.373156 AACAGACAAATCTAGGGCTGTT 57.627 40.909 11.04 11.04 40.55 3.16
428 438 4.373156 ACAGACAAATCTAGGGCTGTTT 57.627 40.909 0.00 0.00 33.19 2.83
429 439 5.499004 ACAGACAAATCTAGGGCTGTTTA 57.501 39.130 0.00 0.00 33.19 2.01
430 440 5.876357 ACAGACAAATCTAGGGCTGTTTAA 58.124 37.500 0.00 0.00 33.19 1.52
431 441 5.705905 ACAGACAAATCTAGGGCTGTTTAAC 59.294 40.000 0.00 0.00 33.19 2.01
432 442 5.705441 CAGACAAATCTAGGGCTGTTTAACA 59.295 40.000 0.00 0.00 32.25 2.41
433 443 5.705905 AGACAAATCTAGGGCTGTTTAACAC 59.294 40.000 0.00 0.00 31.46 3.32
434 444 5.381757 ACAAATCTAGGGCTGTTTAACACA 58.618 37.500 0.00 0.00 0.00 3.72
435 445 6.010219 ACAAATCTAGGGCTGTTTAACACAT 58.990 36.000 0.00 0.00 33.76 3.21
436 446 6.071952 ACAAATCTAGGGCTGTTTAACACATG 60.072 38.462 0.00 0.00 33.76 3.21
437 447 4.901197 TCTAGGGCTGTTTAACACATGA 57.099 40.909 0.00 0.00 33.76 3.07
438 448 5.435686 TCTAGGGCTGTTTAACACATGAT 57.564 39.130 0.00 0.00 33.76 2.45
439 449 6.553953 TCTAGGGCTGTTTAACACATGATA 57.446 37.500 0.00 0.00 33.76 2.15
440 450 6.346096 TCTAGGGCTGTTTAACACATGATAC 58.654 40.000 0.00 0.00 33.76 2.24
441 451 5.179452 AGGGCTGTTTAACACATGATACT 57.821 39.130 0.00 0.00 33.76 2.12
442 452 6.308015 AGGGCTGTTTAACACATGATACTA 57.692 37.500 0.00 0.00 33.76 1.82
443 453 6.900194 AGGGCTGTTTAACACATGATACTAT 58.100 36.000 0.00 0.00 33.76 2.12
444 454 7.346471 AGGGCTGTTTAACACATGATACTATT 58.654 34.615 0.00 0.00 33.76 1.73
445 455 7.834181 AGGGCTGTTTAACACATGATACTATTT 59.166 33.333 0.00 0.00 33.76 1.40
446 456 9.116067 GGGCTGTTTAACACATGATACTATTTA 57.884 33.333 0.00 0.00 33.76 1.40
453 463 7.891183 AACACATGATACTATTTATCCTCGC 57.109 36.000 0.00 0.00 0.00 5.03
454 464 6.993079 ACACATGATACTATTTATCCTCGCA 58.007 36.000 0.00 0.00 0.00 5.10
455 465 7.093354 ACACATGATACTATTTATCCTCGCAG 58.907 38.462 0.00 0.00 0.00 5.18
456 466 6.533012 CACATGATACTATTTATCCTCGCAGG 59.467 42.308 0.00 0.00 36.46 4.85
457 467 5.073311 TGATACTATTTATCCTCGCAGGC 57.927 43.478 0.00 0.00 34.61 4.85
458 468 2.841442 ACTATTTATCCTCGCAGGCC 57.159 50.000 0.00 0.00 34.61 5.19
459 469 2.047061 ACTATTTATCCTCGCAGGCCA 58.953 47.619 5.01 0.00 34.61 5.36
460 470 2.639839 ACTATTTATCCTCGCAGGCCAT 59.360 45.455 5.01 0.00 34.61 4.40
461 471 1.901591 ATTTATCCTCGCAGGCCATG 58.098 50.000 5.01 0.97 34.61 3.66
462 472 0.836606 TTTATCCTCGCAGGCCATGA 59.163 50.000 5.01 0.00 34.61 3.07
463 473 0.836606 TTATCCTCGCAGGCCATGAA 59.163 50.000 5.01 0.00 34.61 2.57
464 474 1.059098 TATCCTCGCAGGCCATGAAT 58.941 50.000 5.01 0.00 34.61 2.57
465 475 0.184451 ATCCTCGCAGGCCATGAATT 59.816 50.000 5.01 0.00 34.61 2.17
466 476 0.034186 TCCTCGCAGGCCATGAATTT 60.034 50.000 5.01 0.00 34.61 1.82
467 477 0.101759 CCTCGCAGGCCATGAATTTG 59.898 55.000 5.01 0.00 0.00 2.32
468 478 0.813184 CTCGCAGGCCATGAATTTGT 59.187 50.000 5.01 0.00 0.00 2.83
469 479 0.810648 TCGCAGGCCATGAATTTGTC 59.189 50.000 5.01 0.00 0.00 3.18
470 480 0.813184 CGCAGGCCATGAATTTGTCT 59.187 50.000 5.01 0.00 0.00 3.41
471 481 1.203052 CGCAGGCCATGAATTTGTCTT 59.797 47.619 5.01 0.00 0.00 3.01
472 482 2.353011 CGCAGGCCATGAATTTGTCTTT 60.353 45.455 5.01 0.00 0.00 2.52
473 483 3.667360 GCAGGCCATGAATTTGTCTTTT 58.333 40.909 5.01 0.00 0.00 2.27
474 484 4.067192 GCAGGCCATGAATTTGTCTTTTT 58.933 39.130 5.01 0.00 0.00 1.94
491 501 3.602390 TTTTTGTACAGCTCGCAACTC 57.398 42.857 0.00 0.00 0.00 3.01
492 502 2.232756 TTTGTACAGCTCGCAACTCA 57.767 45.000 0.00 0.00 0.00 3.41
493 503 2.232756 TTGTACAGCTCGCAACTCAA 57.767 45.000 0.00 0.00 0.00 3.02
494 504 1.783284 TGTACAGCTCGCAACTCAAG 58.217 50.000 0.00 0.00 0.00 3.02
495 505 1.071605 GTACAGCTCGCAACTCAAGG 58.928 55.000 0.00 0.00 0.00 3.61
496 506 0.679505 TACAGCTCGCAACTCAAGGT 59.320 50.000 0.00 0.00 0.00 3.50
497 507 0.679505 ACAGCTCGCAACTCAAGGTA 59.320 50.000 0.00 0.00 0.00 3.08
498 508 1.276421 ACAGCTCGCAACTCAAGGTAT 59.724 47.619 0.00 0.00 0.00 2.73
499 509 2.289694 ACAGCTCGCAACTCAAGGTATT 60.290 45.455 0.00 0.00 0.00 1.89
500 510 2.744202 CAGCTCGCAACTCAAGGTATTT 59.256 45.455 0.00 0.00 0.00 1.40
501 511 3.003480 AGCTCGCAACTCAAGGTATTTC 58.997 45.455 0.00 0.00 0.00 2.17
502 512 2.742053 GCTCGCAACTCAAGGTATTTCA 59.258 45.455 0.00 0.00 0.00 2.69
503 513 3.375299 GCTCGCAACTCAAGGTATTTCAT 59.625 43.478 0.00 0.00 0.00 2.57
504 514 4.494855 GCTCGCAACTCAAGGTATTTCATC 60.495 45.833 0.00 0.00 0.00 2.92
505 515 4.574892 TCGCAACTCAAGGTATTTCATCA 58.425 39.130 0.00 0.00 0.00 3.07
506 516 5.185454 TCGCAACTCAAGGTATTTCATCAT 58.815 37.500 0.00 0.00 0.00 2.45
507 517 5.065090 TCGCAACTCAAGGTATTTCATCATG 59.935 40.000 0.00 0.00 0.00 3.07
508 518 5.065090 CGCAACTCAAGGTATTTCATCATGA 59.935 40.000 0.00 0.00 0.00 3.07
509 519 6.403527 CGCAACTCAAGGTATTTCATCATGAA 60.404 38.462 0.00 0.00 34.03 2.57
546 556 6.327154 TGTGAGTTACATCCTTACATACACG 58.673 40.000 0.00 0.00 33.42 4.49
547 557 5.231568 GTGAGTTACATCCTTACATACACGC 59.768 44.000 0.00 0.00 0.00 5.34
548 558 5.105675 TGAGTTACATCCTTACATACACGCA 60.106 40.000 0.00 0.00 0.00 5.24
549 559 5.914033 AGTTACATCCTTACATACACGCAT 58.086 37.500 0.00 0.00 0.00 4.73
550 560 7.046292 AGTTACATCCTTACATACACGCATA 57.954 36.000 0.00 0.00 0.00 3.14
551 561 7.667557 AGTTACATCCTTACATACACGCATAT 58.332 34.615 0.00 0.00 0.00 1.78
552 562 8.148351 AGTTACATCCTTACATACACGCATATT 58.852 33.333 0.00 0.00 0.00 1.28
553 563 8.770828 GTTACATCCTTACATACACGCATATTT 58.229 33.333 0.00 0.00 0.00 1.40
554 564 7.801716 ACATCCTTACATACACGCATATTTT 57.198 32.000 0.00 0.00 0.00 1.82
555 565 8.220755 ACATCCTTACATACACGCATATTTTT 57.779 30.769 0.00 0.00 0.00 1.94
613 623 9.665719 TTGAATTTTTCAAATATAAAGGCCTCC 57.334 29.630 5.23 0.00 45.94 4.30
614 624 8.820831 TGAATTTTTCAAATATAAAGGCCTCCA 58.179 29.630 5.23 0.00 36.59 3.86
615 625 9.836864 GAATTTTTCAAATATAAAGGCCTCCAT 57.163 29.630 5.23 4.81 0.00 3.41
616 626 9.617523 AATTTTTCAAATATAAAGGCCTCCATG 57.382 29.630 5.23 0.00 0.00 3.66
617 627 6.729690 TTTCAAATATAAAGGCCTCCATGG 57.270 37.500 5.23 4.97 39.35 3.66
618 628 5.661503 TCAAATATAAAGGCCTCCATGGA 57.338 39.130 15.27 15.27 38.35 3.41
619 629 5.634118 TCAAATATAAAGGCCTCCATGGAG 58.366 41.667 31.69 31.69 41.63 3.86
620 630 3.728385 ATATAAAGGCCTCCATGGAGC 57.272 47.619 32.97 26.44 40.69 4.70
621 631 1.527457 ATAAAGGCCTCCATGGAGCT 58.473 50.000 32.97 23.24 40.69 4.09
622 632 1.298953 TAAAGGCCTCCATGGAGCTT 58.701 50.000 32.97 26.98 40.69 3.74
623 633 0.324091 AAAGGCCTCCATGGAGCTTG 60.324 55.000 32.97 21.57 40.69 4.01
624 634 2.123982 GGCCTCCATGGAGCTTGG 60.124 66.667 32.97 22.55 40.69 3.61
625 635 2.832201 GCCTCCATGGAGCTTGGC 60.832 66.667 32.97 27.64 40.69 4.52
626 636 2.123982 CCTCCATGGAGCTTGGCC 60.124 66.667 32.97 0.00 40.69 5.36
627 637 2.687610 CCTCCATGGAGCTTGGCCT 61.688 63.158 32.97 0.00 40.69 5.19
628 638 1.153005 CTCCATGGAGCTTGGCCTC 60.153 63.158 28.45 0.00 35.31 4.70
635 645 1.581447 GAGCTTGGCCTCCAAAACG 59.419 57.895 3.32 0.00 43.44 3.60
636 646 2.049156 GCTTGGCCTCCAAAACGC 60.049 61.111 3.32 0.00 43.44 4.84
637 647 2.650778 CTTGGCCTCCAAAACGCC 59.349 61.111 3.32 0.00 43.44 5.68
638 648 1.903404 CTTGGCCTCCAAAACGCCT 60.903 57.895 3.32 0.00 43.44 5.52
639 649 1.456705 TTGGCCTCCAAAACGCCTT 60.457 52.632 3.32 0.00 40.92 4.35
640 650 1.045911 TTGGCCTCCAAAACGCCTTT 61.046 50.000 3.32 0.00 40.92 3.11
641 651 1.289066 GGCCTCCAAAACGCCTTTC 59.711 57.895 0.00 0.00 39.70 2.62
642 652 1.179174 GGCCTCCAAAACGCCTTTCT 61.179 55.000 0.00 0.00 39.70 2.52
643 653 0.039165 GCCTCCAAAACGCCTTTCTG 60.039 55.000 0.00 0.00 0.00 3.02
644 654 1.318576 CCTCCAAAACGCCTTTCTGT 58.681 50.000 0.00 0.00 0.00 3.41
645 655 1.001378 CCTCCAAAACGCCTTTCTGTG 60.001 52.381 0.00 0.00 0.00 3.66
646 656 1.676006 CTCCAAAACGCCTTTCTGTGT 59.324 47.619 0.00 0.00 0.00 3.72
661 826 9.765795 GCCTTTCTGTGTATGTAGTCTATATTT 57.234 33.333 0.00 0.00 0.00 1.40
737 1184 7.092079 TGCACCTCAATGAATGTAAAGATTTG 58.908 34.615 0.00 0.00 0.00 2.32
960 1945 7.878547 TGGATGCTTTCACACAAATATATCA 57.121 32.000 0.00 0.00 0.00 2.15
964 1949 6.554419 TGCTTTCACACAAATATATCAGCAC 58.446 36.000 0.00 0.00 0.00 4.40
1041 2027 2.092968 CCTCCTTGTGGCAATAGTAGCA 60.093 50.000 0.00 0.00 0.00 3.49
1078 2064 4.028490 CCGCCACCCTAGCCAACA 62.028 66.667 0.00 0.00 0.00 3.33
1380 2405 5.614324 TCATATCCAAGTCATTCTCGGTT 57.386 39.130 0.00 0.00 0.00 4.44
1466 2491 2.100603 CGAGTCCGCCTCTTCGAC 59.899 66.667 0.00 0.00 38.11 4.20
1497 2522 4.749245 TGACATTTCCTTCTTTCTTCGC 57.251 40.909 0.00 0.00 0.00 4.70
1498 2523 3.186409 TGACATTTCCTTCTTTCTTCGCG 59.814 43.478 0.00 0.00 0.00 5.87
1500 2525 0.872388 TTTCCTTCTTTCTTCGCGGC 59.128 50.000 6.13 0.00 0.00 6.53
1508 2533 0.451383 TTTCTTCGCGGCATTGATGG 59.549 50.000 6.13 0.00 0.00 3.51
1525 2556 2.715005 GTGCACGTTGCTGCTTGA 59.285 55.556 0.00 0.00 45.31 3.02
1549 2580 1.747206 GCAATCCCGTGCCATCTTACT 60.747 52.381 0.00 0.00 38.66 2.24
1554 2585 4.497291 TCCCGTGCCATCTTACTAATTT 57.503 40.909 0.00 0.00 0.00 1.82
1555 2586 4.850680 TCCCGTGCCATCTTACTAATTTT 58.149 39.130 0.00 0.00 0.00 1.82
1603 2641 7.439655 GCTGAGACCGAATGATATAAAGAAGTT 59.560 37.037 0.00 0.00 0.00 2.66
1651 2689 9.912634 ATTCATTTGTGAGATTTCAATTAACGT 57.087 25.926 0.00 0.00 34.49 3.99
1658 2696 6.915843 GTGAGATTTCAATTAACGTGGTGTTT 59.084 34.615 0.00 0.00 37.23 2.83
1669 2707 1.070175 CGTGGTGTTTGACGGTGAATC 60.070 52.381 0.00 0.00 31.84 2.52
1756 2796 8.648698 AGCTCTGTACATCATCTTAGATACAT 57.351 34.615 0.00 0.00 0.00 2.29
1760 2800 9.799106 TCTGTACATCATCTTAGATACATCTGA 57.201 33.333 0.00 0.00 37.76 3.27
1778 2820 7.373493 ACATCTGAATTTTTGTGGATCTTGAC 58.627 34.615 0.00 0.00 0.00 3.18
1900 2952 1.613630 AGTCATCGCCCCTCCAGTT 60.614 57.895 0.00 0.00 0.00 3.16
1901 2953 1.201429 AGTCATCGCCCCTCCAGTTT 61.201 55.000 0.00 0.00 0.00 2.66
1972 3027 0.167470 CATGTTCAGCGCACCAGAAG 59.833 55.000 11.47 0.00 0.00 2.85
1983 3038 2.157738 GCACCAGAAGAGCAAACATCT 58.842 47.619 0.00 0.00 0.00 2.90
1984 3039 3.338249 GCACCAGAAGAGCAAACATCTA 58.662 45.455 0.00 0.00 0.00 1.98
2057 3112 4.268359 GAAGATGAACAAAGGCTGGATCT 58.732 43.478 0.00 0.00 0.00 2.75
2063 3118 5.324409 TGAACAAAGGCTGGATCTAAACAT 58.676 37.500 0.00 0.00 0.00 2.71
2076 3131 7.178573 TGGATCTAAACATATCCACCAAACAA 58.821 34.615 0.00 0.00 38.19 2.83
2119 3174 0.110486 ATTTGCCGGAGACACACCTT 59.890 50.000 5.05 0.00 0.00 3.50
2125 3180 0.104120 CGGAGACACACCTTCACACA 59.896 55.000 0.00 0.00 0.00 3.72
2130 3185 1.414919 GACACACCTTCACACACCCTA 59.585 52.381 0.00 0.00 0.00 3.53
2131 3186 2.038557 GACACACCTTCACACACCCTAT 59.961 50.000 0.00 0.00 0.00 2.57
2132 3187 2.441750 ACACACCTTCACACACCCTATT 59.558 45.455 0.00 0.00 0.00 1.73
2133 3188 3.649023 ACACACCTTCACACACCCTATTA 59.351 43.478 0.00 0.00 0.00 0.98
2134 3189 4.000988 CACACCTTCACACACCCTATTAC 58.999 47.826 0.00 0.00 0.00 1.89
2135 3190 3.649023 ACACCTTCACACACCCTATTACA 59.351 43.478 0.00 0.00 0.00 2.41
2136 3191 4.253685 CACCTTCACACACCCTATTACAG 58.746 47.826 0.00 0.00 0.00 2.74
2137 3192 3.908103 ACCTTCACACACCCTATTACAGT 59.092 43.478 0.00 0.00 0.00 3.55
2138 3193 4.253685 CCTTCACACACCCTATTACAGTG 58.746 47.826 0.00 0.00 37.53 3.66
2139 3194 4.262894 CCTTCACACACCCTATTACAGTGT 60.263 45.833 0.00 0.00 45.31 3.55
2147 3202 7.685849 ACACCCTATTACAGTGTGGTAATAT 57.314 36.000 5.88 0.00 42.32 1.28
2148 3203 7.506114 ACACCCTATTACAGTGTGGTAATATG 58.494 38.462 5.88 1.22 42.32 1.78
2149 3204 7.126726 ACACCCTATTACAGTGTGGTAATATGT 59.873 37.037 5.88 1.80 42.32 2.29
2150 3205 7.990886 CACCCTATTACAGTGTGGTAATATGTT 59.009 37.037 5.88 0.00 42.32 2.71
2151 3206 7.990886 ACCCTATTACAGTGTGGTAATATGTTG 59.009 37.037 5.88 0.00 42.32 3.33
2152 3207 7.444183 CCCTATTACAGTGTGGTAATATGTTGG 59.556 40.741 5.88 0.57 42.32 3.77
2153 3208 7.990886 CCTATTACAGTGTGGTAATATGTTGGT 59.009 37.037 5.88 0.00 42.32 3.67
2154 3209 7.624360 ATTACAGTGTGGTAATATGTTGGTG 57.376 36.000 5.88 0.00 41.03 4.17
2155 3210 3.756434 ACAGTGTGGTAATATGTTGGTGC 59.244 43.478 0.00 0.00 0.00 5.01
2156 3211 4.009675 CAGTGTGGTAATATGTTGGTGCT 58.990 43.478 0.00 0.00 0.00 4.40
2157 3212 5.182487 CAGTGTGGTAATATGTTGGTGCTA 58.818 41.667 0.00 0.00 0.00 3.49
2158 3213 5.294306 CAGTGTGGTAATATGTTGGTGCTAG 59.706 44.000 0.00 0.00 0.00 3.42
2159 3214 5.045869 AGTGTGGTAATATGTTGGTGCTAGT 60.046 40.000 0.00 0.00 0.00 2.57
2160 3215 5.064707 GTGTGGTAATATGTTGGTGCTAGTG 59.935 44.000 0.00 0.00 0.00 2.74
2161 3216 5.183228 GTGGTAATATGTTGGTGCTAGTGT 58.817 41.667 0.00 0.00 0.00 3.55
2162 3217 5.646360 GTGGTAATATGTTGGTGCTAGTGTT 59.354 40.000 0.00 0.00 0.00 3.32
2163 3218 6.150474 GTGGTAATATGTTGGTGCTAGTGTTT 59.850 38.462 0.00 0.00 0.00 2.83
2164 3219 6.717540 TGGTAATATGTTGGTGCTAGTGTTTT 59.282 34.615 0.00 0.00 0.00 2.43
2165 3220 7.231722 TGGTAATATGTTGGTGCTAGTGTTTTT 59.768 33.333 0.00 0.00 0.00 1.94
2166 3221 7.753580 GGTAATATGTTGGTGCTAGTGTTTTTC 59.246 37.037 0.00 0.00 0.00 2.29
2167 3222 6.892658 ATATGTTGGTGCTAGTGTTTTTCA 57.107 33.333 0.00 0.00 0.00 2.69
2168 3223 5.789643 ATGTTGGTGCTAGTGTTTTTCAT 57.210 34.783 0.00 0.00 0.00 2.57
2169 3224 6.892658 ATGTTGGTGCTAGTGTTTTTCATA 57.107 33.333 0.00 0.00 0.00 2.15
2170 3225 6.701145 TGTTGGTGCTAGTGTTTTTCATAA 57.299 33.333 0.00 0.00 0.00 1.90
2171 3226 6.734137 TGTTGGTGCTAGTGTTTTTCATAAG 58.266 36.000 0.00 0.00 0.00 1.73
2172 3227 6.544197 TGTTGGTGCTAGTGTTTTTCATAAGA 59.456 34.615 0.00 0.00 0.00 2.10
2173 3228 7.067615 TGTTGGTGCTAGTGTTTTTCATAAGAA 59.932 33.333 0.00 0.00 0.00 2.52
2174 3229 7.759489 TGGTGCTAGTGTTTTTCATAAGAAT 57.241 32.000 0.00 0.00 32.89 2.40
2175 3230 8.856153 TGGTGCTAGTGTTTTTCATAAGAATA 57.144 30.769 0.00 0.00 32.89 1.75
2176 3231 9.461312 TGGTGCTAGTGTTTTTCATAAGAATAT 57.539 29.630 0.00 0.00 32.89 1.28
2189 3244 9.109393 TTTCATAAGAATATATATTGGCGGAGC 57.891 33.333 12.74 0.00 43.72 4.70
2205 3260 4.736126 CGGAGCTTGGGGATTAATTTTT 57.264 40.909 0.00 0.00 0.00 1.94
2233 3288 4.972751 AAAAATGGTGTGGTAATGGCTT 57.027 36.364 0.00 0.00 0.00 4.35
2234 3289 4.972751 AAAATGGTGTGGTAATGGCTTT 57.027 36.364 0.00 0.00 0.00 3.51
2235 3290 4.972751 AAATGGTGTGGTAATGGCTTTT 57.027 36.364 0.00 0.00 0.00 2.27
2236 3291 4.972751 AATGGTGTGGTAATGGCTTTTT 57.027 36.364 0.00 0.00 0.00 1.94
2260 3315 3.917988 TGAGCATCAGTACAGACACAAG 58.082 45.455 0.00 0.00 42.56 3.16
2261 3316 2.670414 GAGCATCAGTACAGACACAAGC 59.330 50.000 0.00 0.00 33.17 4.01
2262 3317 1.391485 GCATCAGTACAGACACAAGCG 59.609 52.381 0.00 0.00 0.00 4.68
2263 3318 1.391485 CATCAGTACAGACACAAGCGC 59.609 52.381 0.00 0.00 0.00 5.92
2264 3319 0.673985 TCAGTACAGACACAAGCGCT 59.326 50.000 2.64 2.64 0.00 5.92
2265 3320 1.063806 CAGTACAGACACAAGCGCTC 58.936 55.000 12.06 0.00 0.00 5.03
2266 3321 0.673985 AGTACAGACACAAGCGCTCA 59.326 50.000 12.06 0.00 0.00 4.26
2267 3322 1.273606 AGTACAGACACAAGCGCTCAT 59.726 47.619 12.06 0.00 0.00 2.90
2268 3323 2.492088 AGTACAGACACAAGCGCTCATA 59.508 45.455 12.06 0.00 0.00 2.15
2269 3324 2.680312 ACAGACACAAGCGCTCATAT 57.320 45.000 12.06 0.00 0.00 1.78
2270 3325 3.801114 ACAGACACAAGCGCTCATATA 57.199 42.857 12.06 0.00 0.00 0.86
2271 3326 3.448686 ACAGACACAAGCGCTCATATAC 58.551 45.455 12.06 1.00 0.00 1.47
2272 3327 3.119137 ACAGACACAAGCGCTCATATACA 60.119 43.478 12.06 0.00 0.00 2.29
2273 3328 3.243877 CAGACACAAGCGCTCATATACAC 59.756 47.826 12.06 0.00 0.00 2.90
2274 3329 2.193447 ACACAAGCGCTCATATACACG 58.807 47.619 12.06 0.00 0.00 4.49
2278 3333 3.916439 CGCTCATATACACGCGCA 58.084 55.556 5.73 0.00 39.11 6.09
2279 3334 2.434688 CGCTCATATACACGCGCAT 58.565 52.632 5.73 0.00 39.11 4.73
2280 3335 1.613270 CGCTCATATACACGCGCATA 58.387 50.000 5.73 1.53 39.11 3.14
2281 3336 1.317611 CGCTCATATACACGCGCATAC 59.682 52.381 5.73 0.00 39.11 2.39
2282 3337 2.324860 GCTCATATACACGCGCATACA 58.675 47.619 5.73 0.00 0.00 2.29
2283 3338 2.090658 GCTCATATACACGCGCATACAC 59.909 50.000 5.73 0.00 0.00 2.90
2284 3339 3.565516 CTCATATACACGCGCATACACT 58.434 45.455 5.73 0.00 0.00 3.55
2285 3340 3.561503 TCATATACACGCGCATACACTC 58.438 45.455 5.73 0.00 0.00 3.51
2286 3341 3.003897 TCATATACACGCGCATACACTCA 59.996 43.478 5.73 0.00 0.00 3.41
2287 3342 2.509052 ATACACGCGCATACACTCAT 57.491 45.000 5.73 0.00 0.00 2.90
2288 3343 1.835121 TACACGCGCATACACTCATC 58.165 50.000 5.73 0.00 0.00 2.92
2289 3344 0.806102 ACACGCGCATACACTCATCC 60.806 55.000 5.73 0.00 0.00 3.51
2290 3345 1.227263 ACGCGCATACACTCATCCC 60.227 57.895 5.73 0.00 0.00 3.85
2291 3346 1.068083 CGCGCATACACTCATCCCT 59.932 57.895 8.75 0.00 0.00 4.20
2292 3347 0.313987 CGCGCATACACTCATCCCTA 59.686 55.000 8.75 0.00 0.00 3.53
2293 3348 1.067565 CGCGCATACACTCATCCCTAT 60.068 52.381 8.75 0.00 0.00 2.57
2294 3349 2.341257 GCGCATACACTCATCCCTATG 58.659 52.381 0.30 0.00 0.00 2.23
2295 3350 2.029020 GCGCATACACTCATCCCTATGA 60.029 50.000 0.30 0.00 39.87 2.15
2296 3351 3.554960 GCGCATACACTCATCCCTATGAA 60.555 47.826 0.30 0.00 41.57 2.57
2297 3352 3.990469 CGCATACACTCATCCCTATGAAC 59.010 47.826 0.00 0.00 41.57 3.18
2298 3353 3.990469 GCATACACTCATCCCTATGAACG 59.010 47.826 0.00 0.00 41.57 3.95
2299 3354 2.604046 ACACTCATCCCTATGAACGC 57.396 50.000 0.00 0.00 41.57 4.84
2300 3355 1.831106 ACACTCATCCCTATGAACGCA 59.169 47.619 0.00 0.00 41.57 5.24
2301 3356 2.205074 CACTCATCCCTATGAACGCAC 58.795 52.381 0.00 0.00 41.57 5.34
2302 3357 1.831106 ACTCATCCCTATGAACGCACA 59.169 47.619 0.00 0.00 41.57 4.57
2303 3358 2.205074 CTCATCCCTATGAACGCACAC 58.795 52.381 0.00 0.00 41.57 3.82
2304 3359 1.552792 TCATCCCTATGAACGCACACA 59.447 47.619 0.00 0.00 39.20 3.72
2305 3360 1.665679 CATCCCTATGAACGCACACAC 59.334 52.381 0.00 0.00 34.84 3.82
2306 3361 0.389296 TCCCTATGAACGCACACACG 60.389 55.000 0.00 0.00 39.50 4.49
2307 3362 1.419922 CCTATGAACGCACACACGC 59.580 57.895 0.00 0.00 36.19 5.34
2308 3363 1.288419 CCTATGAACGCACACACGCA 61.288 55.000 0.00 0.00 36.19 5.24
2309 3364 0.179250 CTATGAACGCACACACGCAC 60.179 55.000 0.00 0.00 36.19 5.34
2310 3365 0.876342 TATGAACGCACACACGCACA 60.876 50.000 0.00 0.00 36.19 4.57
2311 3366 2.350760 GAACGCACACACGCACAC 60.351 61.111 0.00 0.00 36.19 3.82
2312 3367 3.783588 GAACGCACACACGCACACC 62.784 63.158 0.00 0.00 36.19 4.16
2315 3370 2.280524 GCACACACGCACACCCTA 60.281 61.111 0.00 0.00 0.00 3.53
2316 3371 2.604174 GCACACACGCACACCCTAC 61.604 63.158 0.00 0.00 0.00 3.18
2317 3372 1.959226 CACACACGCACACCCTACC 60.959 63.158 0.00 0.00 0.00 3.18
2318 3373 2.358247 CACACGCACACCCTACCC 60.358 66.667 0.00 0.00 0.00 3.69
2319 3374 3.633116 ACACGCACACCCTACCCC 61.633 66.667 0.00 0.00 0.00 4.95
2320 3375 3.319198 CACGCACACCCTACCCCT 61.319 66.667 0.00 0.00 0.00 4.79
2321 3376 1.985662 CACGCACACCCTACCCCTA 60.986 63.158 0.00 0.00 0.00 3.53
2322 3377 1.002533 ACGCACACCCTACCCCTAT 59.997 57.895 0.00 0.00 0.00 2.57
2323 3378 1.335132 ACGCACACCCTACCCCTATG 61.335 60.000 0.00 0.00 0.00 2.23
2324 3379 1.046472 CGCACACCCTACCCCTATGA 61.046 60.000 0.00 0.00 0.00 2.15
2325 3380 0.759346 GCACACCCTACCCCTATGAG 59.241 60.000 0.00 0.00 0.00 2.90
2326 3381 0.759346 CACACCCTACCCCTATGAGC 59.241 60.000 0.00 0.00 0.00 4.26
2327 3382 0.341961 ACACCCTACCCCTATGAGCA 59.658 55.000 0.00 0.00 0.00 4.26
2328 3383 0.759346 CACCCTACCCCTATGAGCAC 59.241 60.000 0.00 0.00 0.00 4.40
2329 3384 0.400093 ACCCTACCCCTATGAGCACC 60.400 60.000 0.00 0.00 0.00 5.01
2330 3385 0.104934 CCCTACCCCTATGAGCACCT 60.105 60.000 0.00 0.00 0.00 4.00
2331 3386 1.343069 CCTACCCCTATGAGCACCTC 58.657 60.000 0.00 0.00 0.00 3.85
2332 3387 1.343069 CTACCCCTATGAGCACCTCC 58.657 60.000 0.00 0.00 0.00 4.30
2333 3388 0.469331 TACCCCTATGAGCACCTCCG 60.469 60.000 0.00 0.00 0.00 4.63
2334 3389 1.762460 CCCCTATGAGCACCTCCGT 60.762 63.158 0.00 0.00 0.00 4.69
2335 3390 1.443407 CCCTATGAGCACCTCCGTG 59.557 63.158 0.00 0.00 43.35 4.94
2336 3391 1.043116 CCCTATGAGCACCTCCGTGA 61.043 60.000 0.00 0.00 43.14 4.35
2337 3392 0.387202 CCTATGAGCACCTCCGTGAG 59.613 60.000 0.00 0.00 43.14 3.51
2338 3393 1.393603 CTATGAGCACCTCCGTGAGA 58.606 55.000 2.84 0.00 43.14 3.27
2339 3394 1.066303 CTATGAGCACCTCCGTGAGAC 59.934 57.143 2.84 0.00 43.14 3.36
2340 3395 0.613292 ATGAGCACCTCCGTGAGACT 60.613 55.000 2.84 0.00 43.14 3.24
2341 3396 1.214062 GAGCACCTCCGTGAGACTG 59.786 63.158 2.84 0.22 43.14 3.51
2342 3397 1.228583 AGCACCTCCGTGAGACTGA 60.229 57.895 2.84 0.00 43.14 3.41
2343 3398 1.214062 GCACCTCCGTGAGACTGAG 59.786 63.158 2.84 0.00 43.14 3.35
2344 3399 1.214062 CACCTCCGTGAGACTGAGC 59.786 63.158 2.84 0.00 43.14 4.26
2345 3400 1.979693 ACCTCCGTGAGACTGAGCC 60.980 63.158 2.84 0.00 29.48 4.70
2346 3401 2.487428 CTCCGTGAGACTGAGCCG 59.513 66.667 0.00 0.00 0.00 5.52
2347 3402 3.057547 CTCCGTGAGACTGAGCCGG 62.058 68.421 0.00 0.00 39.98 6.13
2348 3403 4.803426 CCGTGAGACTGAGCCGGC 62.803 72.222 21.89 21.89 0.00 6.13
2349 3404 4.056125 CGTGAGACTGAGCCGGCA 62.056 66.667 31.54 7.98 0.00 5.69
2350 3405 2.581354 GTGAGACTGAGCCGGCAT 59.419 61.111 31.54 14.28 0.00 4.40
2351 3406 1.816537 GTGAGACTGAGCCGGCATA 59.183 57.895 31.54 16.21 0.00 3.14
2352 3407 0.390860 GTGAGACTGAGCCGGCATAT 59.609 55.000 31.54 8.11 0.00 1.78
2353 3408 0.676184 TGAGACTGAGCCGGCATATC 59.324 55.000 31.54 18.63 0.00 1.63
2354 3409 0.676184 GAGACTGAGCCGGCATATCA 59.324 55.000 31.54 22.44 0.00 2.15
2355 3410 1.274728 GAGACTGAGCCGGCATATCAT 59.725 52.381 31.54 13.17 0.00 2.45
2356 3411 1.274728 AGACTGAGCCGGCATATCATC 59.725 52.381 31.54 19.98 0.00 2.92
2357 3412 1.274728 GACTGAGCCGGCATATCATCT 59.725 52.381 31.54 11.40 0.00 2.90
2358 3413 1.696336 ACTGAGCCGGCATATCATCTT 59.304 47.619 31.54 3.33 0.00 2.40
2359 3414 2.074576 CTGAGCCGGCATATCATCTTG 58.925 52.381 31.54 7.95 0.00 3.02
2360 3415 1.693606 TGAGCCGGCATATCATCTTGA 59.306 47.619 31.54 0.00 0.00 3.02
2361 3416 2.289257 TGAGCCGGCATATCATCTTGAG 60.289 50.000 31.54 0.00 0.00 3.02
2362 3417 1.973515 AGCCGGCATATCATCTTGAGA 59.026 47.619 31.54 0.00 0.00 3.27
2363 3418 2.570752 AGCCGGCATATCATCTTGAGAT 59.429 45.455 31.54 0.00 34.56 2.75
2364 3419 3.008813 AGCCGGCATATCATCTTGAGATT 59.991 43.478 31.54 0.00 31.21 2.40
2365 3420 3.755378 GCCGGCATATCATCTTGAGATTT 59.245 43.478 24.80 0.00 31.21 2.17
2366 3421 4.379186 GCCGGCATATCATCTTGAGATTTG 60.379 45.833 24.80 0.00 31.21 2.32
2367 3422 4.379186 CCGGCATATCATCTTGAGATTTGC 60.379 45.833 9.20 9.20 44.44 3.68
2368 3423 4.668431 CGGCATATCATCTTGAGATTTGCG 60.668 45.833 10.78 5.06 45.40 4.85
2369 3424 4.453478 GGCATATCATCTTGAGATTTGCGA 59.547 41.667 10.78 0.00 45.40 5.10
2370 3425 5.049198 GGCATATCATCTTGAGATTTGCGAA 60.049 40.000 10.78 0.00 45.40 4.70
2371 3426 6.078479 GCATATCATCTTGAGATTTGCGAAG 58.922 40.000 0.00 0.00 39.43 3.79
2372 3427 6.293298 GCATATCATCTTGAGATTTGCGAAGT 60.293 38.462 0.00 0.00 39.43 3.01
2373 3428 5.731599 ATCATCTTGAGATTTGCGAAGTC 57.268 39.130 0.00 0.00 31.21 3.01
2374 3429 4.568956 TCATCTTGAGATTTGCGAAGTCA 58.431 39.130 0.00 0.00 31.21 3.41
2375 3430 4.389992 TCATCTTGAGATTTGCGAAGTCAC 59.610 41.667 1.73 0.00 31.21 3.67
2376 3431 3.995199 TCTTGAGATTTGCGAAGTCACT 58.005 40.909 1.73 0.00 0.00 3.41
2377 3432 3.742882 TCTTGAGATTTGCGAAGTCACTG 59.257 43.478 1.73 0.08 0.00 3.66
2378 3433 3.111853 TGAGATTTGCGAAGTCACTGT 57.888 42.857 0.00 0.00 0.00 3.55
2379 3434 4.251543 TGAGATTTGCGAAGTCACTGTA 57.748 40.909 0.00 0.00 0.00 2.74
2380 3435 4.237724 TGAGATTTGCGAAGTCACTGTAG 58.762 43.478 0.00 0.00 0.00 2.74
2381 3436 3.589988 AGATTTGCGAAGTCACTGTAGG 58.410 45.455 0.00 0.00 0.00 3.18
2382 3437 1.508632 TTTGCGAAGTCACTGTAGGC 58.491 50.000 0.00 0.00 0.00 3.93
2383 3438 0.666274 TTGCGAAGTCACTGTAGGCG 60.666 55.000 0.00 0.00 0.00 5.52
2384 3439 1.080705 GCGAAGTCACTGTAGGCGT 60.081 57.895 0.00 0.00 0.00 5.68
2385 3440 1.071567 GCGAAGTCACTGTAGGCGTC 61.072 60.000 0.00 0.00 0.00 5.19
2386 3441 0.522180 CGAAGTCACTGTAGGCGTCT 59.478 55.000 0.00 0.00 0.00 4.18
2387 3442 1.466024 CGAAGTCACTGTAGGCGTCTC 60.466 57.143 0.00 0.00 0.00 3.36
2388 3443 0.522180 AAGTCACTGTAGGCGTCTCG 59.478 55.000 0.00 0.00 0.00 4.04
2389 3444 0.605860 AGTCACTGTAGGCGTCTCGT 60.606 55.000 0.00 0.00 0.00 4.18
2390 3445 0.179194 GTCACTGTAGGCGTCTCGTC 60.179 60.000 0.00 0.00 0.00 4.20
2391 3446 1.226046 CACTGTAGGCGTCTCGTCG 60.226 63.158 0.00 0.00 36.23 5.12
2392 3447 1.670406 ACTGTAGGCGTCTCGTCGT 60.670 57.895 0.00 0.00 36.23 4.34
2393 3448 1.060622 CTGTAGGCGTCTCGTCGTC 59.939 63.158 0.00 0.00 36.23 4.20
2394 3449 2.021106 GTAGGCGTCTCGTCGTCG 59.979 66.667 0.00 0.00 40.52 5.12
2395 3450 2.125952 TAGGCGTCTCGTCGTCGA 60.126 61.111 4.42 4.42 44.12 4.20
2396 3451 2.447887 TAGGCGTCTCGTCGTCGAC 61.448 63.158 15.51 15.51 41.35 4.20
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.108709 TTTGAATCATGCAAGGCGGC 60.109 50.000 0.00 0.00 0.00 6.53
1 2 2.264813 CTTTTGAATCATGCAAGGCGG 58.735 47.619 0.00 0.00 0.00 6.13
221 231 3.023832 CCAAAAGGGATTTCCGCTACAT 58.976 45.455 0.00 0.00 41.52 2.29
222 232 2.040545 TCCAAAAGGGATTTCCGCTACA 59.959 45.455 0.00 0.00 42.15 2.74
223 233 2.718563 TCCAAAAGGGATTTCCGCTAC 58.281 47.619 0.00 0.00 42.15 3.58
233 243 2.351276 GCCGAGCTCCAAAAGGGA 59.649 61.111 8.47 0.00 45.89 4.20
234 244 2.751837 GGCCGAGCTCCAAAAGGG 60.752 66.667 8.47 3.22 38.37 3.95
235 245 1.746991 GAGGCCGAGCTCCAAAAGG 60.747 63.158 8.47 4.02 0.00 3.11
236 246 0.606401 TTGAGGCCGAGCTCCAAAAG 60.606 55.000 8.47 0.00 0.00 2.27
237 247 0.606401 CTTGAGGCCGAGCTCCAAAA 60.606 55.000 8.47 0.00 0.00 2.44
238 248 1.003355 CTTGAGGCCGAGCTCCAAA 60.003 57.895 8.47 0.00 0.00 3.28
239 249 2.217038 ACTTGAGGCCGAGCTCCAA 61.217 57.895 8.47 5.18 0.00 3.53
240 250 2.604686 ACTTGAGGCCGAGCTCCA 60.605 61.111 8.47 0.00 0.00 3.86
241 251 2.125350 CACTTGAGGCCGAGCTCC 60.125 66.667 8.47 0.00 0.00 4.70
242 252 1.153667 CTCACTTGAGGCCGAGCTC 60.154 63.158 2.73 2.73 38.48 4.09
243 253 2.977178 CTCACTTGAGGCCGAGCT 59.023 61.111 0.00 0.00 38.48 4.09
251 261 2.503895 ATTTGGAGGCCTCACTTGAG 57.496 50.000 33.29 0.00 41.71 3.02
252 262 2.108075 TGAATTTGGAGGCCTCACTTGA 59.892 45.455 33.29 14.64 0.00 3.02
253 263 2.517959 TGAATTTGGAGGCCTCACTTG 58.482 47.619 33.29 0.00 0.00 3.16
254 264 2.978156 TGAATTTGGAGGCCTCACTT 57.022 45.000 33.29 19.46 0.00 3.16
255 265 2.978156 TTGAATTTGGAGGCCTCACT 57.022 45.000 33.29 12.66 0.00 3.41
256 266 4.541973 AATTTGAATTTGGAGGCCTCAC 57.458 40.909 33.29 22.31 0.00 3.51
330 340 8.840321 GTGTGTTATGCCTTCATTTATATCTGT 58.160 33.333 0.00 0.00 34.22 3.41
331 341 8.839343 TGTGTGTTATGCCTTCATTTATATCTG 58.161 33.333 0.00 0.00 34.22 2.90
332 342 8.978874 TGTGTGTTATGCCTTCATTTATATCT 57.021 30.769 0.00 0.00 34.22 1.98
333 343 9.616634 CATGTGTGTTATGCCTTCATTTATATC 57.383 33.333 0.00 0.00 34.22 1.63
334 344 9.135189 ACATGTGTGTTATGCCTTCATTTATAT 57.865 29.630 0.00 0.00 34.01 0.86
335 345 8.404765 CACATGTGTGTTATGCCTTCATTTATA 58.595 33.333 18.03 0.00 40.96 0.98
336 346 7.259882 CACATGTGTGTTATGCCTTCATTTAT 58.740 34.615 18.03 0.00 40.96 1.40
337 347 6.619744 CACATGTGTGTTATGCCTTCATTTA 58.380 36.000 18.03 0.00 40.96 1.40
338 348 5.472148 CACATGTGTGTTATGCCTTCATTT 58.528 37.500 18.03 0.00 40.96 2.32
339 349 5.063180 CACATGTGTGTTATGCCTTCATT 57.937 39.130 18.03 0.00 40.96 2.57
340 350 4.707030 CACATGTGTGTTATGCCTTCAT 57.293 40.909 18.03 0.00 40.96 2.57
355 365 8.994429 TTTGAACTGAAAATTTACACACATGT 57.006 26.923 0.00 0.00 43.30 3.21
360 370 9.790389 ACGTATTTTGAACTGAAAATTTACACA 57.210 25.926 0.00 0.00 36.94 3.72
368 378 9.574458 TCATTTCAACGTATTTTGAACTGAAAA 57.426 25.926 14.65 0.00 45.11 2.29
369 379 9.232082 CTCATTTCAACGTATTTTGAACTGAAA 57.768 29.630 16.60 12.85 46.24 2.69
370 380 7.860373 CCTCATTTCAACGTATTTTGAACTGAA 59.140 33.333 16.60 5.99 46.24 3.02
371 381 7.359595 CCTCATTTCAACGTATTTTGAACTGA 58.640 34.615 15.61 15.61 45.51 3.41
372 382 6.582295 CCCTCATTTCAACGTATTTTGAACTG 59.418 38.462 10.26 10.26 43.57 3.16
373 383 6.264518 ACCCTCATTTCAACGTATTTTGAACT 59.735 34.615 0.00 0.00 43.57 3.01
374 384 6.443792 ACCCTCATTTCAACGTATTTTGAAC 58.556 36.000 0.00 0.00 43.57 3.18
375 385 6.642707 ACCCTCATTTCAACGTATTTTGAA 57.357 33.333 0.00 0.00 42.47 2.69
376 386 6.039941 ACAACCCTCATTTCAACGTATTTTGA 59.960 34.615 0.00 0.00 33.55 2.69
377 387 6.143758 CACAACCCTCATTTCAACGTATTTTG 59.856 38.462 0.00 0.00 0.00 2.44
378 388 6.183360 ACACAACCCTCATTTCAACGTATTTT 60.183 34.615 0.00 0.00 0.00 1.82
379 389 5.300792 ACACAACCCTCATTTCAACGTATTT 59.699 36.000 0.00 0.00 0.00 1.40
380 390 4.825085 ACACAACCCTCATTTCAACGTATT 59.175 37.500 0.00 0.00 0.00 1.89
381 391 4.394729 ACACAACCCTCATTTCAACGTAT 58.605 39.130 0.00 0.00 0.00 3.06
382 392 3.811083 ACACAACCCTCATTTCAACGTA 58.189 40.909 0.00 0.00 0.00 3.57
383 393 2.650322 ACACAACCCTCATTTCAACGT 58.350 42.857 0.00 0.00 0.00 3.99
384 394 4.822036 TTACACAACCCTCATTTCAACG 57.178 40.909 0.00 0.00 0.00 4.10
385 395 6.334202 TGTTTTACACAACCCTCATTTCAAC 58.666 36.000 0.00 0.00 29.87 3.18
386 396 6.378564 TCTGTTTTACACAACCCTCATTTCAA 59.621 34.615 0.00 0.00 33.87 2.69
387 397 5.888724 TCTGTTTTACACAACCCTCATTTCA 59.111 36.000 0.00 0.00 33.87 2.69
388 398 6.183360 TGTCTGTTTTACACAACCCTCATTTC 60.183 38.462 0.00 0.00 33.87 2.17
389 399 5.654650 TGTCTGTTTTACACAACCCTCATTT 59.345 36.000 0.00 0.00 33.87 2.32
390 400 5.197451 TGTCTGTTTTACACAACCCTCATT 58.803 37.500 0.00 0.00 33.87 2.57
391 401 4.787551 TGTCTGTTTTACACAACCCTCAT 58.212 39.130 0.00 0.00 33.87 2.90
392 402 4.223556 TGTCTGTTTTACACAACCCTCA 57.776 40.909 0.00 0.00 33.87 3.86
393 403 5.570234 TTTGTCTGTTTTACACAACCCTC 57.430 39.130 0.00 0.00 33.87 4.30
394 404 5.891551 AGATTTGTCTGTTTTACACAACCCT 59.108 36.000 0.00 0.00 33.87 4.34
395 405 6.144078 AGATTTGTCTGTTTTACACAACCC 57.856 37.500 0.00 0.00 33.87 4.11
396 406 7.360361 CCTAGATTTGTCTGTTTTACACAACC 58.640 38.462 0.00 0.00 33.87 3.77
397 407 7.360361 CCCTAGATTTGTCTGTTTTACACAAC 58.640 38.462 0.00 0.00 33.87 3.32
398 408 6.016610 GCCCTAGATTTGTCTGTTTTACACAA 60.017 38.462 0.00 0.00 33.87 3.33
399 409 5.472137 GCCCTAGATTTGTCTGTTTTACACA 59.528 40.000 0.00 0.00 0.00 3.72
400 410 5.705905 AGCCCTAGATTTGTCTGTTTTACAC 59.294 40.000 0.00 0.00 0.00 2.90
401 411 5.705441 CAGCCCTAGATTTGTCTGTTTTACA 59.295 40.000 0.00 0.00 0.00 2.41
402 412 5.705905 ACAGCCCTAGATTTGTCTGTTTTAC 59.294 40.000 0.00 0.00 31.51 2.01
403 413 5.876357 ACAGCCCTAGATTTGTCTGTTTTA 58.124 37.500 0.00 0.00 31.51 1.52
404 414 4.729868 ACAGCCCTAGATTTGTCTGTTTT 58.270 39.130 0.00 0.00 31.51 2.43
405 415 4.373156 ACAGCCCTAGATTTGTCTGTTT 57.627 40.909 0.00 0.00 31.51 2.83
406 416 4.373156 AACAGCCCTAGATTTGTCTGTT 57.627 40.909 0.00 0.00 39.19 3.16
407 417 4.373156 AAACAGCCCTAGATTTGTCTGT 57.627 40.909 0.00 0.00 36.46 3.41
408 418 5.705441 TGTTAAACAGCCCTAGATTTGTCTG 59.295 40.000 0.00 0.00 0.00 3.51
409 419 5.705905 GTGTTAAACAGCCCTAGATTTGTCT 59.294 40.000 0.00 0.00 0.00 3.41
410 420 5.472137 TGTGTTAAACAGCCCTAGATTTGTC 59.528 40.000 0.00 0.00 33.78 3.18
411 421 5.381757 TGTGTTAAACAGCCCTAGATTTGT 58.618 37.500 0.00 0.00 33.78 2.83
412 422 5.957842 TGTGTTAAACAGCCCTAGATTTG 57.042 39.130 0.00 0.00 33.78 2.32
413 423 6.245408 TCATGTGTTAAACAGCCCTAGATTT 58.755 36.000 0.00 0.00 43.64 2.17
414 424 5.815581 TCATGTGTTAAACAGCCCTAGATT 58.184 37.500 0.00 0.00 43.64 2.40
415 425 5.435686 TCATGTGTTAAACAGCCCTAGAT 57.564 39.130 0.00 0.00 43.64 1.98
416 426 4.901197 TCATGTGTTAAACAGCCCTAGA 57.099 40.909 0.00 0.00 43.64 2.43
417 427 6.349300 AGTATCATGTGTTAAACAGCCCTAG 58.651 40.000 0.00 0.00 43.64 3.02
418 428 6.308015 AGTATCATGTGTTAAACAGCCCTA 57.692 37.500 0.00 0.00 43.64 3.53
419 429 5.179452 AGTATCATGTGTTAAACAGCCCT 57.821 39.130 0.00 0.00 43.64 5.19
420 430 7.568199 AATAGTATCATGTGTTAAACAGCCC 57.432 36.000 0.00 0.00 43.64 5.19
427 437 9.419297 GCGAGGATAAATAGTATCATGTGTTAA 57.581 33.333 0.00 0.00 0.00 2.01
428 438 8.581578 TGCGAGGATAAATAGTATCATGTGTTA 58.418 33.333 0.00 0.00 0.00 2.41
429 439 7.441836 TGCGAGGATAAATAGTATCATGTGTT 58.558 34.615 0.00 0.00 0.00 3.32
430 440 6.993079 TGCGAGGATAAATAGTATCATGTGT 58.007 36.000 0.00 0.00 0.00 3.72
431 441 6.533012 CCTGCGAGGATAAATAGTATCATGTG 59.467 42.308 0.00 0.00 37.67 3.21
432 442 6.634805 CCTGCGAGGATAAATAGTATCATGT 58.365 40.000 0.00 0.00 37.67 3.21
433 443 5.521735 GCCTGCGAGGATAAATAGTATCATG 59.478 44.000 6.40 0.00 37.67 3.07
434 444 5.395768 GGCCTGCGAGGATAAATAGTATCAT 60.396 44.000 0.00 0.00 37.67 2.45
435 445 4.081642 GGCCTGCGAGGATAAATAGTATCA 60.082 45.833 0.00 0.00 37.67 2.15
436 446 4.081642 TGGCCTGCGAGGATAAATAGTATC 60.082 45.833 3.32 0.00 37.67 2.24
437 447 3.838317 TGGCCTGCGAGGATAAATAGTAT 59.162 43.478 3.32 0.00 37.67 2.12
438 448 3.236047 TGGCCTGCGAGGATAAATAGTA 58.764 45.455 3.32 0.00 37.67 1.82
439 449 2.047061 TGGCCTGCGAGGATAAATAGT 58.953 47.619 3.32 0.00 37.67 2.12
440 450 2.839486 TGGCCTGCGAGGATAAATAG 57.161 50.000 3.32 0.00 37.67 1.73
441 451 2.637382 TCATGGCCTGCGAGGATAAATA 59.363 45.455 3.32 0.00 37.67 1.40
442 452 1.421268 TCATGGCCTGCGAGGATAAAT 59.579 47.619 3.32 0.00 37.67 1.40
443 453 0.836606 TCATGGCCTGCGAGGATAAA 59.163 50.000 3.32 0.00 37.67 1.40
444 454 0.836606 TTCATGGCCTGCGAGGATAA 59.163 50.000 3.32 0.00 37.67 1.75
445 455 1.059098 ATTCATGGCCTGCGAGGATA 58.941 50.000 3.32 0.00 37.67 2.59
446 456 0.184451 AATTCATGGCCTGCGAGGAT 59.816 50.000 3.32 0.00 37.67 3.24
447 457 0.034186 AAATTCATGGCCTGCGAGGA 60.034 50.000 3.32 0.00 37.67 3.71
448 458 0.101759 CAAATTCATGGCCTGCGAGG 59.898 55.000 3.32 0.00 38.80 4.63
449 459 0.813184 ACAAATTCATGGCCTGCGAG 59.187 50.000 3.32 0.00 0.00 5.03
450 460 0.810648 GACAAATTCATGGCCTGCGA 59.189 50.000 3.32 0.00 0.00 5.10
451 461 0.813184 AGACAAATTCATGGCCTGCG 59.187 50.000 3.32 0.00 0.00 5.18
452 462 3.323751 AAAGACAAATTCATGGCCTGC 57.676 42.857 3.32 0.00 0.00 4.85
471 481 2.939756 TGAGTTGCGAGCTGTACAAAAA 59.060 40.909 0.00 0.00 0.00 1.94
472 482 2.556257 TGAGTTGCGAGCTGTACAAAA 58.444 42.857 0.00 0.00 0.00 2.44
473 483 2.232756 TGAGTTGCGAGCTGTACAAA 57.767 45.000 0.00 0.00 0.00 2.83
474 484 2.135139 CTTGAGTTGCGAGCTGTACAA 58.865 47.619 0.00 0.00 0.00 2.41
475 485 1.605457 CCTTGAGTTGCGAGCTGTACA 60.605 52.381 0.00 0.00 0.00 2.90
476 486 1.071605 CCTTGAGTTGCGAGCTGTAC 58.928 55.000 0.00 0.00 0.00 2.90
477 487 0.679505 ACCTTGAGTTGCGAGCTGTA 59.320 50.000 0.00 0.00 0.00 2.74
478 488 0.679505 TACCTTGAGTTGCGAGCTGT 59.320 50.000 0.00 0.00 0.00 4.40
479 489 2.015736 ATACCTTGAGTTGCGAGCTG 57.984 50.000 0.00 0.00 0.00 4.24
480 490 2.770164 AATACCTTGAGTTGCGAGCT 57.230 45.000 0.00 0.00 0.00 4.09
481 491 2.742053 TGAAATACCTTGAGTTGCGAGC 59.258 45.455 0.00 0.00 0.00 5.03
482 492 4.631377 TGATGAAATACCTTGAGTTGCGAG 59.369 41.667 0.00 0.00 0.00 5.03
483 493 4.574892 TGATGAAATACCTTGAGTTGCGA 58.425 39.130 0.00 0.00 0.00 5.10
484 494 4.944962 TGATGAAATACCTTGAGTTGCG 57.055 40.909 0.00 0.00 0.00 4.85
485 495 6.441093 TCATGATGAAATACCTTGAGTTGC 57.559 37.500 0.00 0.00 0.00 4.17
522 532 6.327154 CGTGTATGTAAGGATGTAACTCACA 58.673 40.000 0.00 0.00 42.69 3.58
523 533 5.231568 GCGTGTATGTAAGGATGTAACTCAC 59.768 44.000 0.00 0.00 0.00 3.51
524 534 5.105675 TGCGTGTATGTAAGGATGTAACTCA 60.106 40.000 0.00 0.00 0.00 3.41
525 535 5.345702 TGCGTGTATGTAAGGATGTAACTC 58.654 41.667 0.00 0.00 0.00 3.01
526 536 5.333299 TGCGTGTATGTAAGGATGTAACT 57.667 39.130 0.00 0.00 0.00 2.24
527 537 7.884816 ATATGCGTGTATGTAAGGATGTAAC 57.115 36.000 0.00 0.00 0.00 2.50
528 538 8.896320 AAATATGCGTGTATGTAAGGATGTAA 57.104 30.769 0.00 0.00 0.00 2.41
529 539 8.896320 AAAATATGCGTGTATGTAAGGATGTA 57.104 30.769 0.00 0.00 0.00 2.29
530 540 7.801716 AAAATATGCGTGTATGTAAGGATGT 57.198 32.000 0.00 0.00 0.00 3.06
588 598 8.820831 TGGAGGCCTTTATATTTGAAAAATTCA 58.179 29.630 6.77 0.00 38.04 2.57
589 599 9.836864 ATGGAGGCCTTTATATTTGAAAAATTC 57.163 29.630 6.77 0.00 0.00 2.17
590 600 9.617523 CATGGAGGCCTTTATATTTGAAAAATT 57.382 29.630 6.77 0.00 0.00 1.82
591 601 8.212995 CCATGGAGGCCTTTATATTTGAAAAAT 58.787 33.333 6.77 0.00 0.00 1.82
592 602 7.401493 TCCATGGAGGCCTTTATATTTGAAAAA 59.599 33.333 11.44 0.00 37.29 1.94
593 603 6.900186 TCCATGGAGGCCTTTATATTTGAAAA 59.100 34.615 11.44 0.00 37.29 2.29
594 604 6.439487 TCCATGGAGGCCTTTATATTTGAAA 58.561 36.000 11.44 0.00 37.29 2.69
595 605 6.024563 TCCATGGAGGCCTTTATATTTGAA 57.975 37.500 11.44 0.00 37.29 2.69
596 606 5.634118 CTCCATGGAGGCCTTTATATTTGA 58.366 41.667 31.14 0.00 38.51 2.69
597 607 4.219288 GCTCCATGGAGGCCTTTATATTTG 59.781 45.833 36.92 12.89 42.19 2.32
598 608 4.106987 AGCTCCATGGAGGCCTTTATATTT 59.893 41.667 36.92 11.92 42.19 1.40
599 609 3.659686 AGCTCCATGGAGGCCTTTATATT 59.340 43.478 36.92 12.52 42.19 1.28
600 610 3.263724 AGCTCCATGGAGGCCTTTATAT 58.736 45.455 36.92 13.14 42.19 0.86
601 611 2.706350 AGCTCCATGGAGGCCTTTATA 58.294 47.619 36.92 3.05 42.19 0.98
602 612 1.527457 AGCTCCATGGAGGCCTTTAT 58.473 50.000 36.92 14.36 42.19 1.40
603 613 1.064463 CAAGCTCCATGGAGGCCTTTA 60.064 52.381 36.92 4.58 42.19 1.85
604 614 0.324091 CAAGCTCCATGGAGGCCTTT 60.324 55.000 36.92 19.63 42.19 3.11
605 615 1.305623 CAAGCTCCATGGAGGCCTT 59.694 57.895 36.92 29.06 42.19 4.35
606 616 2.687610 CCAAGCTCCATGGAGGCCT 61.688 63.158 36.92 25.64 42.19 5.19
607 617 2.123982 CCAAGCTCCATGGAGGCC 60.124 66.667 36.92 23.97 42.19 5.19
608 618 2.832201 GCCAAGCTCCATGGAGGC 60.832 66.667 36.92 29.82 42.19 4.70
609 619 2.123982 GGCCAAGCTCCATGGAGG 60.124 66.667 36.92 25.05 42.19 4.30
610 620 1.153005 GAGGCCAAGCTCCATGGAG 60.153 63.158 33.73 33.73 44.56 3.86
611 621 2.683465 GGAGGCCAAGCTCCATGGA 61.683 63.158 15.27 15.27 40.56 3.41
612 622 2.123982 GGAGGCCAAGCTCCATGG 60.124 66.667 4.97 4.97 39.45 3.66
613 623 2.679092 TGGAGGCCAAGCTCCATG 59.321 61.111 5.01 0.00 44.02 3.66
615 625 0.827507 GTTTTGGAGGCCAAGCTCCA 60.828 55.000 5.01 6.40 44.84 3.86
616 626 1.866853 CGTTTTGGAGGCCAAGCTCC 61.867 60.000 5.01 3.06 44.84 4.70
617 627 1.581447 CGTTTTGGAGGCCAAGCTC 59.419 57.895 5.01 0.00 44.84 4.09
618 628 2.564721 GCGTTTTGGAGGCCAAGCT 61.565 57.895 5.01 0.00 44.84 3.74
619 629 2.049156 GCGTTTTGGAGGCCAAGC 60.049 61.111 5.01 0.00 44.84 4.01
624 634 0.039165 CAGAAAGGCGTTTTGGAGGC 60.039 55.000 5.76 0.00 38.40 4.70
625 635 1.001378 CACAGAAAGGCGTTTTGGAGG 60.001 52.381 5.76 0.00 0.00 4.30
626 636 1.676006 ACACAGAAAGGCGTTTTGGAG 59.324 47.619 5.76 3.28 0.00 3.86
627 637 1.757682 ACACAGAAAGGCGTTTTGGA 58.242 45.000 5.76 0.00 0.00 3.53
628 638 3.004315 ACATACACAGAAAGGCGTTTTGG 59.996 43.478 5.76 4.26 0.00 3.28
629 639 4.223320 ACATACACAGAAAGGCGTTTTG 57.777 40.909 5.76 8.71 0.00 2.44
630 640 5.061179 ACTACATACACAGAAAGGCGTTTT 58.939 37.500 5.76 0.00 0.00 2.43
631 641 4.638304 ACTACATACACAGAAAGGCGTTT 58.362 39.130 3.62 3.62 0.00 3.60
632 642 4.021368 AGACTACATACACAGAAAGGCGTT 60.021 41.667 0.00 0.00 0.00 4.84
633 643 3.510360 AGACTACATACACAGAAAGGCGT 59.490 43.478 0.00 0.00 0.00 5.68
634 644 4.111375 AGACTACATACACAGAAAGGCG 57.889 45.455 0.00 0.00 0.00 5.52
635 645 9.765795 AAATATAGACTACATACACAGAAAGGC 57.234 33.333 0.00 0.00 0.00 4.35
691 1132 7.173390 GGTGCAATTAAATATGTACTCTCTCCC 59.827 40.741 0.00 0.00 33.38 4.30
696 1137 9.632638 ATTGAGGTGCAATTAAATATGTACTCT 57.367 29.630 0.00 4.18 44.68 3.24
860 1832 5.801531 TGTGTATTCAGTACTCACCAACT 57.198 39.130 8.66 0.00 33.23 3.16
861 1833 7.435068 AAATGTGTATTCAGTACTCACCAAC 57.565 36.000 8.66 0.00 39.00 3.77
937 1920 6.860023 GCTGATATATTTGTGTGAAAGCATCC 59.140 38.462 0.00 0.00 0.00 3.51
960 1945 1.876156 GCTGACAACTAAAGCTGTGCT 59.124 47.619 0.00 0.00 42.56 4.40
964 1949 2.740981 CTCAGGCTGACAACTAAAGCTG 59.259 50.000 14.43 0.00 37.12 4.24
1041 2027 0.036010 CGGTGGCAGTGAGAAGGATT 60.036 55.000 0.00 0.00 0.00 3.01
1089 2075 2.360350 GCTGTAGGCTTGGCTGCA 60.360 61.111 13.42 13.42 38.06 4.41
1101 2093 3.802329 GCCCTAGCATTTCATACGCTGTA 60.802 47.826 0.00 0.00 39.53 2.74
1110 2102 2.875672 GCCATATCGCCCTAGCATTTCA 60.876 50.000 0.00 0.00 39.83 2.69
1188 2180 3.006537 CGGAGAAGTGTACCTCAAAGGAA 59.993 47.826 0.00 0.00 37.67 3.36
1289 2281 1.078214 CCTTCAAGGCCGCTGATCA 60.078 57.895 10.92 0.00 0.00 2.92
1375 2400 1.684983 AGAGGAGAAAACGTCAACCGA 59.315 47.619 0.00 0.00 40.70 4.69
1380 2405 1.549170 GGGCTAGAGGAGAAAACGTCA 59.451 52.381 0.00 0.00 0.00 4.35
1421 2446 2.543848 GACACTTGTGTCGATCTTGCAA 59.456 45.455 16.60 0.00 0.00 4.08
1466 2491 0.165944 GGAAATGTCAAGCGACGTGG 59.834 55.000 0.00 0.00 45.80 4.94
1497 2522 2.100797 CGTGCACCATCAATGCCG 59.899 61.111 12.15 0.00 42.69 5.69
1498 2523 0.733566 CAACGTGCACCATCAATGCC 60.734 55.000 12.15 0.00 42.69 4.40
1500 2525 2.728132 GCAACGTGCACCATCAATG 58.272 52.632 12.15 2.76 44.26 2.82
1525 2556 0.461135 GATGGCACGGGATTGCAAAT 59.539 50.000 1.71 0.00 44.94 2.32
1571 2605 2.115427 TCATTCGGTCTCAGCCCATAA 58.885 47.619 0.00 0.00 0.00 1.90
1603 2641 4.377839 TTTGCAATCACGAACAAAAGGA 57.622 36.364 0.00 0.00 0.00 3.36
1651 2689 1.600023 GGATTCACCGTCAAACACCA 58.400 50.000 0.00 0.00 0.00 4.17
1685 2724 7.175347 TGTGCCAAAATACCATTATGCTTTA 57.825 32.000 0.00 0.00 0.00 1.85
1702 2741 7.856145 AAGTGAAAATTTATTGTTGTGCCAA 57.144 28.000 0.00 0.00 0.00 4.52
1718 2758 9.719355 TGATGTACAGAGCTAATTAAGTGAAAA 57.281 29.630 0.33 0.00 0.00 2.29
1754 2794 6.525628 CGTCAAGATCCACAAAAATTCAGATG 59.474 38.462 0.00 0.00 0.00 2.90
1756 2796 5.762711 TCGTCAAGATCCACAAAAATTCAGA 59.237 36.000 0.00 0.00 0.00 3.27
1760 2800 6.375455 AGCTATCGTCAAGATCCACAAAAATT 59.625 34.615 0.00 0.00 40.66 1.82
1767 2808 4.202121 TGGTAAGCTATCGTCAAGATCCAC 60.202 45.833 0.00 0.00 40.66 4.02
1778 2820 3.804036 TGGGAAATGTGGTAAGCTATCG 58.196 45.455 0.00 0.00 0.00 2.92
1818 2862 8.126871 TGATTAATAGATCGAACGTTTCCTTG 57.873 34.615 0.46 0.00 0.00 3.61
1819 2863 8.765219 CATGATTAATAGATCGAACGTTTCCTT 58.235 33.333 0.46 0.00 0.00 3.36
1874 2918 4.865761 GGCGATGACTGCGGCGTA 62.866 66.667 9.37 1.99 44.17 4.42
1882 2926 1.201429 AAACTGGAGGGGCGATGACT 61.201 55.000 0.00 0.00 0.00 3.41
1900 2952 6.909550 ATCTAATACAACAAGTTTGGCCAA 57.090 33.333 16.05 16.05 0.00 4.52
1901 2953 7.172342 ACTATCTAATACAACAAGTTTGGCCA 58.828 34.615 0.00 0.00 0.00 5.36
1972 3027 5.344066 TCTCTTCATCGTAGATGTTTGCTC 58.656 41.667 9.50 0.00 45.12 4.26
1984 3039 9.743057 CTTTCAATCTATAGTTCTCTTCATCGT 57.257 33.333 0.00 0.00 0.00 3.73
2057 3112 7.147983 GGTGCTATTGTTTGGTGGATATGTTTA 60.148 37.037 0.00 0.00 0.00 2.01
2063 3118 4.308526 TGGTGCTATTGTTTGGTGGATA 57.691 40.909 0.00 0.00 0.00 2.59
2076 3131 3.195610 TCACGAGATTCAGTTGGTGCTAT 59.804 43.478 0.00 0.00 0.00 2.97
2125 3180 7.685849 ACATATTACCACACTGTAATAGGGT 57.314 36.000 15.64 10.57 46.36 4.34
2130 3185 6.094881 GCACCAACATATTACCACACTGTAAT 59.905 38.462 0.00 0.00 42.50 1.89
2131 3186 5.413213 GCACCAACATATTACCACACTGTAA 59.587 40.000 0.00 0.00 35.33 2.41
2132 3187 4.938832 GCACCAACATATTACCACACTGTA 59.061 41.667 0.00 0.00 0.00 2.74
2133 3188 3.756434 GCACCAACATATTACCACACTGT 59.244 43.478 0.00 0.00 0.00 3.55
2134 3189 4.009675 AGCACCAACATATTACCACACTG 58.990 43.478 0.00 0.00 0.00 3.66
2135 3190 4.301072 AGCACCAACATATTACCACACT 57.699 40.909 0.00 0.00 0.00 3.55
2136 3191 5.064707 CACTAGCACCAACATATTACCACAC 59.935 44.000 0.00 0.00 0.00 3.82
2137 3192 5.182487 CACTAGCACCAACATATTACCACA 58.818 41.667 0.00 0.00 0.00 4.17
2138 3193 5.183228 ACACTAGCACCAACATATTACCAC 58.817 41.667 0.00 0.00 0.00 4.16
2139 3194 5.429681 ACACTAGCACCAACATATTACCA 57.570 39.130 0.00 0.00 0.00 3.25
2140 3195 6.753107 AAACACTAGCACCAACATATTACC 57.247 37.500 0.00 0.00 0.00 2.85
2141 3196 8.293867 TGAAAAACACTAGCACCAACATATTAC 58.706 33.333 0.00 0.00 0.00 1.89
2142 3197 8.397575 TGAAAAACACTAGCACCAACATATTA 57.602 30.769 0.00 0.00 0.00 0.98
2143 3198 7.283625 TGAAAAACACTAGCACCAACATATT 57.716 32.000 0.00 0.00 0.00 1.28
2144 3199 6.892658 TGAAAAACACTAGCACCAACATAT 57.107 33.333 0.00 0.00 0.00 1.78
2145 3200 6.892658 ATGAAAAACACTAGCACCAACATA 57.107 33.333 0.00 0.00 0.00 2.29
2146 3201 5.789643 ATGAAAAACACTAGCACCAACAT 57.210 34.783 0.00 0.00 0.00 2.71
2147 3202 6.544197 TCTTATGAAAAACACTAGCACCAACA 59.456 34.615 0.00 0.00 0.00 3.33
2148 3203 6.966021 TCTTATGAAAAACACTAGCACCAAC 58.034 36.000 0.00 0.00 0.00 3.77
2149 3204 7.575414 TTCTTATGAAAAACACTAGCACCAA 57.425 32.000 0.00 0.00 0.00 3.67
2150 3205 7.759489 ATTCTTATGAAAAACACTAGCACCA 57.241 32.000 0.00 0.00 35.63 4.17
2163 3218 9.109393 GCTCCGCCAATATATATTCTTATGAAA 57.891 33.333 4.93 0.00 35.63 2.69
2164 3219 8.486210 AGCTCCGCCAATATATATTCTTATGAA 58.514 33.333 4.93 0.00 36.54 2.57
2165 3220 8.023021 AGCTCCGCCAATATATATTCTTATGA 57.977 34.615 4.93 0.00 0.00 2.15
2166 3221 8.554528 CAAGCTCCGCCAATATATATTCTTATG 58.445 37.037 4.93 0.00 0.00 1.90
2167 3222 7.716998 CCAAGCTCCGCCAATATATATTCTTAT 59.283 37.037 4.93 0.00 0.00 1.73
2168 3223 7.047891 CCAAGCTCCGCCAATATATATTCTTA 58.952 38.462 4.93 0.00 0.00 2.10
2169 3224 5.882557 CCAAGCTCCGCCAATATATATTCTT 59.117 40.000 4.93 2.02 0.00 2.52
2170 3225 5.431765 CCAAGCTCCGCCAATATATATTCT 58.568 41.667 4.93 0.00 0.00 2.40
2171 3226 4.576463 CCCAAGCTCCGCCAATATATATTC 59.424 45.833 4.93 0.00 0.00 1.75
2172 3227 4.526970 CCCAAGCTCCGCCAATATATATT 58.473 43.478 1.91 1.91 0.00 1.28
2173 3228 3.117888 CCCCAAGCTCCGCCAATATATAT 60.118 47.826 0.00 0.00 0.00 0.86
2174 3229 2.238646 CCCCAAGCTCCGCCAATATATA 59.761 50.000 0.00 0.00 0.00 0.86
2175 3230 1.004745 CCCCAAGCTCCGCCAATATAT 59.995 52.381 0.00 0.00 0.00 0.86
2176 3231 0.400213 CCCCAAGCTCCGCCAATATA 59.600 55.000 0.00 0.00 0.00 0.86
2177 3232 1.151450 CCCCAAGCTCCGCCAATAT 59.849 57.895 0.00 0.00 0.00 1.28
2178 3233 1.352622 ATCCCCAAGCTCCGCCAATA 61.353 55.000 0.00 0.00 0.00 1.90
2179 3234 2.228841 AATCCCCAAGCTCCGCCAAT 62.229 55.000 0.00 0.00 0.00 3.16
2180 3235 1.567208 TAATCCCCAAGCTCCGCCAA 61.567 55.000 0.00 0.00 0.00 4.52
2181 3236 1.567208 TTAATCCCCAAGCTCCGCCA 61.567 55.000 0.00 0.00 0.00 5.69
2182 3237 0.178990 ATTAATCCCCAAGCTCCGCC 60.179 55.000 0.00 0.00 0.00 6.13
2183 3238 1.692411 AATTAATCCCCAAGCTCCGC 58.308 50.000 0.00 0.00 0.00 5.54
2184 3239 4.736126 AAAAATTAATCCCCAAGCTCCG 57.264 40.909 0.00 0.00 0.00 4.63
2212 3267 4.972751 AAGCCATTACCACACCATTTTT 57.027 36.364 0.00 0.00 0.00 1.94
2213 3268 4.972751 AAAGCCATTACCACACCATTTT 57.027 36.364 0.00 0.00 0.00 1.82
2214 3269 4.972751 AAAAGCCATTACCACACCATTT 57.027 36.364 0.00 0.00 0.00 2.32
2215 3270 4.972751 AAAAAGCCATTACCACACCATT 57.027 36.364 0.00 0.00 0.00 3.16
2235 3290 5.122519 TGTGTCTGTACTGATGCTCAAAAA 58.877 37.500 5.69 0.00 0.00 1.94
2236 3291 4.702831 TGTGTCTGTACTGATGCTCAAAA 58.297 39.130 5.69 0.00 0.00 2.44
2237 3292 4.335400 TGTGTCTGTACTGATGCTCAAA 57.665 40.909 5.69 0.00 0.00 2.69
2238 3293 4.309933 CTTGTGTCTGTACTGATGCTCAA 58.690 43.478 5.69 6.69 0.00 3.02
2239 3294 3.862264 GCTTGTGTCTGTACTGATGCTCA 60.862 47.826 5.69 0.00 0.00 4.26
2240 3295 2.670414 GCTTGTGTCTGTACTGATGCTC 59.330 50.000 5.69 0.00 0.00 4.26
2241 3296 2.693069 GCTTGTGTCTGTACTGATGCT 58.307 47.619 5.69 0.00 0.00 3.79
2242 3297 1.391485 CGCTTGTGTCTGTACTGATGC 59.609 52.381 5.69 3.20 0.00 3.91
2243 3298 1.391485 GCGCTTGTGTCTGTACTGATG 59.609 52.381 0.00 0.00 0.00 3.07
2244 3299 1.273606 AGCGCTTGTGTCTGTACTGAT 59.726 47.619 2.64 0.00 0.00 2.90
2245 3300 0.673985 AGCGCTTGTGTCTGTACTGA 59.326 50.000 2.64 0.00 0.00 3.41
2246 3301 1.063806 GAGCGCTTGTGTCTGTACTG 58.936 55.000 13.26 0.00 0.00 2.74
2247 3302 0.673985 TGAGCGCTTGTGTCTGTACT 59.326 50.000 13.26 0.00 0.00 2.73
2248 3303 1.714794 ATGAGCGCTTGTGTCTGTAC 58.285 50.000 13.26 0.00 0.00 2.90
2249 3304 3.801114 ATATGAGCGCTTGTGTCTGTA 57.199 42.857 13.26 0.00 0.00 2.74
2250 3305 2.680312 ATATGAGCGCTTGTGTCTGT 57.320 45.000 13.26 0.00 0.00 3.41
2251 3306 3.243877 GTGTATATGAGCGCTTGTGTCTG 59.756 47.826 13.26 0.00 0.00 3.51
2252 3307 3.448686 GTGTATATGAGCGCTTGTGTCT 58.551 45.455 13.26 0.00 0.00 3.41
2253 3308 2.216488 CGTGTATATGAGCGCTTGTGTC 59.784 50.000 13.26 0.00 0.00 3.67
2254 3309 2.193447 CGTGTATATGAGCGCTTGTGT 58.807 47.619 13.26 4.27 0.00 3.72
2255 3310 1.071239 GCGTGTATATGAGCGCTTGTG 60.071 52.381 13.26 0.00 45.48 3.33
2256 3311 1.209128 GCGTGTATATGAGCGCTTGT 58.791 50.000 13.26 5.98 45.48 3.16
2257 3312 0.159554 CGCGTGTATATGAGCGCTTG 59.840 55.000 13.26 0.00 46.56 4.01
2258 3313 2.506544 CGCGTGTATATGAGCGCTT 58.493 52.632 13.26 0.00 46.56 4.68
2259 3314 4.228451 CGCGTGTATATGAGCGCT 57.772 55.556 11.27 11.27 46.56 5.92
2262 3317 2.090658 GTGTATGCGCGTGTATATGAGC 59.909 50.000 13.61 0.41 38.85 4.26
2263 3318 3.565516 AGTGTATGCGCGTGTATATGAG 58.434 45.455 13.61 0.00 0.00 2.90
2264 3319 3.003897 TGAGTGTATGCGCGTGTATATGA 59.996 43.478 13.61 0.00 0.00 2.15
2265 3320 3.305110 TGAGTGTATGCGCGTGTATATG 58.695 45.455 13.61 0.00 0.00 1.78
2266 3321 3.636282 TGAGTGTATGCGCGTGTATAT 57.364 42.857 13.61 0.00 0.00 0.86
2267 3322 3.561503 GATGAGTGTATGCGCGTGTATA 58.438 45.455 13.61 2.40 0.00 1.47
2268 3323 2.394708 GATGAGTGTATGCGCGTGTAT 58.605 47.619 13.61 4.63 0.00 2.29
2269 3324 1.535226 GGATGAGTGTATGCGCGTGTA 60.535 52.381 13.61 0.00 0.00 2.90
2270 3325 0.806102 GGATGAGTGTATGCGCGTGT 60.806 55.000 13.61 0.00 0.00 4.49
2271 3326 1.490693 GGGATGAGTGTATGCGCGTG 61.491 60.000 13.61 0.00 0.00 5.34
2272 3327 1.227263 GGGATGAGTGTATGCGCGT 60.227 57.895 8.43 7.55 0.00 6.01
2273 3328 0.313987 TAGGGATGAGTGTATGCGCG 59.686 55.000 0.00 0.00 0.00 6.86
2274 3329 2.029020 TCATAGGGATGAGTGTATGCGC 60.029 50.000 0.00 0.00 37.15 6.09
2275 3330 3.942130 TCATAGGGATGAGTGTATGCG 57.058 47.619 0.00 0.00 37.15 4.73
2276 3331 3.990469 CGTTCATAGGGATGAGTGTATGC 59.010 47.826 0.00 0.00 43.03 3.14
2277 3332 3.990469 GCGTTCATAGGGATGAGTGTATG 59.010 47.826 0.00 0.00 43.03 2.39
2278 3333 3.641436 TGCGTTCATAGGGATGAGTGTAT 59.359 43.478 0.00 0.00 43.03 2.29
2279 3334 3.028130 TGCGTTCATAGGGATGAGTGTA 58.972 45.455 0.00 0.00 43.03 2.90
2280 3335 1.831106 TGCGTTCATAGGGATGAGTGT 59.169 47.619 0.00 0.00 43.03 3.55
2281 3336 2.205074 GTGCGTTCATAGGGATGAGTG 58.795 52.381 0.00 0.00 43.03 3.51
2282 3337 1.831106 TGTGCGTTCATAGGGATGAGT 59.169 47.619 0.00 0.00 43.03 3.41
2283 3338 2.205074 GTGTGCGTTCATAGGGATGAG 58.795 52.381 0.00 0.00 43.03 2.90
2284 3339 1.552792 TGTGTGCGTTCATAGGGATGA 59.447 47.619 0.00 0.00 40.45 2.92
2285 3340 1.665679 GTGTGTGCGTTCATAGGGATG 59.334 52.381 0.00 0.00 0.00 3.51
2286 3341 1.739035 CGTGTGTGCGTTCATAGGGAT 60.739 52.381 0.00 0.00 0.00 3.85
2287 3342 0.389296 CGTGTGTGCGTTCATAGGGA 60.389 55.000 0.00 0.00 0.00 4.20
2288 3343 1.966493 GCGTGTGTGCGTTCATAGGG 61.966 60.000 0.00 0.00 0.00 3.53
2289 3344 1.288419 TGCGTGTGTGCGTTCATAGG 61.288 55.000 0.00 0.00 37.81 2.57
2290 3345 0.179250 GTGCGTGTGTGCGTTCATAG 60.179 55.000 0.00 0.00 37.81 2.23
2291 3346 0.876342 TGTGCGTGTGTGCGTTCATA 60.876 50.000 0.00 0.00 37.81 2.15
2292 3347 2.176926 TGTGCGTGTGTGCGTTCAT 61.177 52.632 0.00 0.00 37.81 2.57
2293 3348 2.815647 TGTGCGTGTGTGCGTTCA 60.816 55.556 0.00 0.00 37.81 3.18
2294 3349 2.350760 GTGTGCGTGTGTGCGTTC 60.351 61.111 0.00 0.00 37.81 3.95
2295 3350 3.871574 GGTGTGCGTGTGTGCGTT 61.872 61.111 0.00 0.00 37.81 4.84
2298 3353 2.280524 TAGGGTGTGCGTGTGTGC 60.281 61.111 0.00 0.00 0.00 4.57
2299 3354 1.959226 GGTAGGGTGTGCGTGTGTG 60.959 63.158 0.00 0.00 0.00 3.82
2300 3355 2.424302 GGTAGGGTGTGCGTGTGT 59.576 61.111 0.00 0.00 0.00 3.72
2301 3356 2.358247 GGGTAGGGTGTGCGTGTG 60.358 66.667 0.00 0.00 0.00 3.82
2302 3357 2.735151 TAGGGGTAGGGTGTGCGTGT 62.735 60.000 0.00 0.00 0.00 4.49
2303 3358 1.335132 ATAGGGGTAGGGTGTGCGTG 61.335 60.000 0.00 0.00 0.00 5.34
2304 3359 1.002533 ATAGGGGTAGGGTGTGCGT 59.997 57.895 0.00 0.00 0.00 5.24
2305 3360 1.046472 TCATAGGGGTAGGGTGTGCG 61.046 60.000 0.00 0.00 0.00 5.34
2306 3361 0.759346 CTCATAGGGGTAGGGTGTGC 59.241 60.000 0.00 0.00 0.00 4.57
2307 3362 0.759346 GCTCATAGGGGTAGGGTGTG 59.241 60.000 0.00 0.00 0.00 3.82
2308 3363 0.341961 TGCTCATAGGGGTAGGGTGT 59.658 55.000 0.00 0.00 0.00 4.16
2309 3364 0.759346 GTGCTCATAGGGGTAGGGTG 59.241 60.000 0.00 0.00 0.00 4.61
2310 3365 0.400093 GGTGCTCATAGGGGTAGGGT 60.400 60.000 0.00 0.00 0.00 4.34
2311 3366 0.104934 AGGTGCTCATAGGGGTAGGG 60.105 60.000 0.00 0.00 0.00 3.53
2312 3367 1.343069 GAGGTGCTCATAGGGGTAGG 58.657 60.000 0.00 0.00 0.00 3.18
2313 3368 1.343069 GGAGGTGCTCATAGGGGTAG 58.657 60.000 0.00 0.00 31.08 3.18
2314 3369 0.469331 CGGAGGTGCTCATAGGGGTA 60.469 60.000 0.00 0.00 31.08 3.69
2315 3370 1.762460 CGGAGGTGCTCATAGGGGT 60.762 63.158 0.00 0.00 31.08 4.95
2316 3371 1.762460 ACGGAGGTGCTCATAGGGG 60.762 63.158 0.00 0.00 31.08 4.79
2317 3372 1.043116 TCACGGAGGTGCTCATAGGG 61.043 60.000 0.00 0.00 44.03 3.53
2318 3373 0.387202 CTCACGGAGGTGCTCATAGG 59.613 60.000 0.00 0.00 44.03 2.57
2319 3374 1.066303 GTCTCACGGAGGTGCTCATAG 59.934 57.143 1.76 0.00 44.03 2.23
2320 3375 1.103803 GTCTCACGGAGGTGCTCATA 58.896 55.000 1.76 0.00 44.03 2.15
2321 3376 0.613292 AGTCTCACGGAGGTGCTCAT 60.613 55.000 1.76 0.00 44.03 2.90
2322 3377 1.228583 AGTCTCACGGAGGTGCTCA 60.229 57.895 1.76 0.00 44.03 4.26
2323 3378 1.214062 CAGTCTCACGGAGGTGCTC 59.786 63.158 1.76 0.00 44.03 4.26
2324 3379 1.228583 TCAGTCTCACGGAGGTGCT 60.229 57.895 1.76 0.00 44.03 4.40
2325 3380 1.214062 CTCAGTCTCACGGAGGTGC 59.786 63.158 1.76 0.00 44.03 5.01
2326 3381 1.214062 GCTCAGTCTCACGGAGGTG 59.786 63.158 6.04 0.00 45.78 4.00
2327 3382 1.979693 GGCTCAGTCTCACGGAGGT 60.980 63.158 6.04 0.00 40.14 3.85
2328 3383 2.888863 GGCTCAGTCTCACGGAGG 59.111 66.667 6.04 0.00 40.14 4.30
2329 3384 2.487428 CGGCTCAGTCTCACGGAG 59.513 66.667 0.00 0.00 42.19 4.63
2331 3386 4.803426 GCCGGCTCAGTCTCACGG 62.803 72.222 22.15 0.00 46.78 4.94
2332 3387 2.004808 TATGCCGGCTCAGTCTCACG 62.005 60.000 29.70 0.00 0.00 4.35
2333 3388 0.390860 ATATGCCGGCTCAGTCTCAC 59.609 55.000 29.70 0.00 0.00 3.51
2334 3389 0.676184 GATATGCCGGCTCAGTCTCA 59.324 55.000 29.70 4.25 0.00 3.27
2335 3390 0.676184 TGATATGCCGGCTCAGTCTC 59.324 55.000 29.70 15.31 0.00 3.36
2336 3391 1.274728 GATGATATGCCGGCTCAGTCT 59.725 52.381 29.70 8.26 0.00 3.24
2337 3392 1.274728 AGATGATATGCCGGCTCAGTC 59.725 52.381 29.70 19.55 0.00 3.51
2338 3393 1.346062 AGATGATATGCCGGCTCAGT 58.654 50.000 29.70 13.44 0.00 3.41
2339 3394 2.074576 CAAGATGATATGCCGGCTCAG 58.925 52.381 29.70 7.35 0.00 3.35
2340 3395 1.693606 TCAAGATGATATGCCGGCTCA 59.306 47.619 29.70 23.34 0.00 4.26
2341 3396 2.028658 TCTCAAGATGATATGCCGGCTC 60.029 50.000 29.70 17.89 0.00 4.70
2342 3397 1.973515 TCTCAAGATGATATGCCGGCT 59.026 47.619 29.70 15.76 0.00 5.52
2343 3398 2.462456 TCTCAAGATGATATGCCGGC 57.538 50.000 22.73 22.73 0.00 6.13
2344 3399 4.379186 GCAAATCTCAAGATGATATGCCGG 60.379 45.833 0.00 0.00 34.49 6.13
2345 3400 4.668431 CGCAAATCTCAAGATGATATGCCG 60.668 45.833 11.48 6.42 34.49 5.69
2346 3401 4.453478 TCGCAAATCTCAAGATGATATGCC 59.547 41.667 11.48 0.00 34.49 4.40
2347 3402 5.602458 TCGCAAATCTCAAGATGATATGC 57.398 39.130 0.00 2.65 34.49 3.14
2348 3403 7.042254 TGACTTCGCAAATCTCAAGATGATATG 60.042 37.037 0.00 0.00 34.49 1.78
2349 3404 6.988580 TGACTTCGCAAATCTCAAGATGATAT 59.011 34.615 0.00 0.00 34.49 1.63
2350 3405 6.256539 GTGACTTCGCAAATCTCAAGATGATA 59.743 38.462 0.00 0.00 34.49 2.15
2351 3406 5.064452 GTGACTTCGCAAATCTCAAGATGAT 59.936 40.000 0.00 0.00 34.49 2.45
2352 3407 4.389992 GTGACTTCGCAAATCTCAAGATGA 59.610 41.667 0.00 0.00 34.49 2.92
2353 3408 4.391216 AGTGACTTCGCAAATCTCAAGATG 59.609 41.667 0.00 0.00 34.49 2.90
2354 3409 4.391216 CAGTGACTTCGCAAATCTCAAGAT 59.609 41.667 0.00 0.00 36.07 2.40
2355 3410 3.742882 CAGTGACTTCGCAAATCTCAAGA 59.257 43.478 0.00 0.00 0.00 3.02
2356 3411 3.496130 ACAGTGACTTCGCAAATCTCAAG 59.504 43.478 0.00 0.00 0.00 3.02
2357 3412 3.466836 ACAGTGACTTCGCAAATCTCAA 58.533 40.909 0.00 0.00 0.00 3.02
2358 3413 3.111853 ACAGTGACTTCGCAAATCTCA 57.888 42.857 0.00 0.00 0.00 3.27
2359 3414 3.614616 CCTACAGTGACTTCGCAAATCTC 59.385 47.826 0.00 0.00 0.00 2.75
2360 3415 3.589988 CCTACAGTGACTTCGCAAATCT 58.410 45.455 0.00 0.00 0.00 2.40
2361 3416 2.094417 GCCTACAGTGACTTCGCAAATC 59.906 50.000 0.00 0.00 0.00 2.17
2362 3417 2.076863 GCCTACAGTGACTTCGCAAAT 58.923 47.619 0.00 0.00 0.00 2.32
2363 3418 1.508632 GCCTACAGTGACTTCGCAAA 58.491 50.000 0.00 0.00 0.00 3.68
2364 3419 0.666274 CGCCTACAGTGACTTCGCAA 60.666 55.000 0.00 0.00 0.00 4.85
2365 3420 1.080772 CGCCTACAGTGACTTCGCA 60.081 57.895 0.00 0.00 0.00 5.10
2366 3421 1.071567 GACGCCTACAGTGACTTCGC 61.072 60.000 0.00 0.00 0.00 4.70
2367 3422 0.522180 AGACGCCTACAGTGACTTCG 59.478 55.000 0.00 0.00 0.00 3.79
2368 3423 1.466024 CGAGACGCCTACAGTGACTTC 60.466 57.143 0.00 0.00 30.94 3.01
2369 3424 0.522180 CGAGACGCCTACAGTGACTT 59.478 55.000 0.00 0.00 30.94 3.01
2370 3425 0.605860 ACGAGACGCCTACAGTGACT 60.606 55.000 0.00 0.00 33.56 3.41
2371 3426 0.179194 GACGAGACGCCTACAGTGAC 60.179 60.000 0.00 0.00 0.00 3.67
2372 3427 1.632948 CGACGAGACGCCTACAGTGA 61.633 60.000 0.00 0.00 0.00 3.41
2373 3428 1.226046 CGACGAGACGCCTACAGTG 60.226 63.158 0.00 0.00 0.00 3.66
2374 3429 1.633852 GACGACGAGACGCCTACAGT 61.634 60.000 0.00 0.00 36.70 3.55
2375 3430 1.060622 GACGACGAGACGCCTACAG 59.939 63.158 0.00 0.00 36.70 2.74
2376 3431 2.733671 CGACGACGAGACGCCTACA 61.734 63.158 0.00 0.00 42.66 2.74
2377 3432 2.021106 CGACGACGAGACGCCTAC 59.979 66.667 0.00 0.00 42.66 3.18
2378 3433 2.125952 TCGACGACGAGACGCCTA 60.126 61.111 5.75 0.00 43.81 3.93


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.