Multiple sequence alignment - TraesCS3A01G482000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G482000 chr3A 100.000 2857 0 0 236 3092 712698196 712701052 0.000000e+00 5276.0
1 TraesCS3A01G482000 chr3A 84.135 1040 144 15 1162 2186 712726832 712725799 0.000000e+00 987.0
2 TraesCS3A01G482000 chr3A 82.793 1110 147 25 1021 2101 712729476 712728382 0.000000e+00 952.0
3 TraesCS3A01G482000 chr3A 75.806 930 193 29 1156 2066 713535484 713534568 2.830000e-120 442.0
4 TraesCS3A01G482000 chr3A 100.000 71 0 0 1 71 712697961 712698031 6.960000e-27 132.0
5 TraesCS3A01G482000 chr3A 91.176 68 5 1 1 68 649638136 649638202 1.180000e-14 91.6
6 TraesCS3A01G482000 chr3D 94.154 1608 69 9 659 2255 577381854 577383447 0.000000e+00 2425.0
7 TraesCS3A01G482000 chr3D 83.205 1167 155 26 1155 2286 577414679 577413519 0.000000e+00 1031.0
8 TraesCS3A01G482000 chr3D 84.390 1025 140 14 1162 2171 577410530 577409511 0.000000e+00 989.0
9 TraesCS3A01G482000 chr3D 76.401 928 191 25 1156 2066 577790177 577789261 2.790000e-130 475.0
10 TraesCS3A01G482000 chr3D 84.615 234 28 4 236 461 15265185 15265418 3.100000e-55 226.0
11 TraesCS3A01G482000 chr3D 84.255 235 27 8 236 460 20754928 20755162 1.440000e-53 220.0
12 TraesCS3A01G482000 chr3D 100.000 35 0 0 2255 2289 577393938 577393972 7.160000e-07 65.8
13 TraesCS3A01G482000 chr3B 90.812 1404 95 14 724 2100 770556449 770557845 0.000000e+00 1847.0
14 TraesCS3A01G482000 chr3B 89.780 910 55 22 716 1589 769398121 769399028 0.000000e+00 1131.0
15 TraesCS3A01G482000 chr3B 84.792 960 127 12 1157 2101 770653295 770652340 0.000000e+00 946.0
16 TraesCS3A01G482000 chr3B 83.544 1027 145 19 1162 2171 770610055 770609036 0.000000e+00 939.0
17 TraesCS3A01G482000 chr3B 81.190 420 46 16 2089 2506 770558191 770558579 1.080000e-79 307.0
18 TraesCS3A01G482000 chr3B 86.822 129 10 6 2735 2857 318802937 318803064 1.500000e-28 137.0
19 TraesCS3A01G482000 chr5D 85.673 342 36 10 2753 3086 63616058 63616394 6.350000e-92 348.0
20 TraesCS3A01G482000 chr5D 89.427 227 23 1 236 461 297304201 297303975 5.050000e-73 285.0
21 TraesCS3A01G482000 chr5D 86.325 234 21 5 236 458 557623406 557623173 8.560000e-61 244.0
22 TraesCS3A01G482000 chr7B 84.358 358 43 9 2743 3092 636400385 636400033 3.820000e-89 339.0
23 TraesCS3A01G482000 chr7B 83.799 358 44 10 2743 3092 636399289 636398938 8.270000e-86 327.0
24 TraesCS3A01G482000 chr1B 84.104 346 42 10 2749 3086 563620667 563621007 3.850000e-84 322.0
25 TraesCS3A01G482000 chr7D 83.965 343 43 7 2751 3086 34936978 34937315 4.980000e-83 318.0
26 TraesCS3A01G482000 chr2A 83.616 354 43 9 2748 3092 678110295 678109948 4.980000e-83 318.0
27 TraesCS3A01G482000 chr5A 92.342 222 15 1 2873 3092 638620513 638620292 6.440000e-82 315.0
28 TraesCS3A01G482000 chr5A 81.132 212 30 5 2502 2711 51602305 51602508 8.870000e-36 161.0
29 TraesCS3A01G482000 chr6D 84.375 320 42 7 2750 3065 452313244 452312929 1.080000e-79 307.0
30 TraesCS3A01G482000 chr2D 82.558 344 48 8 2750 3086 57203845 57204183 3.020000e-75 292.0
31 TraesCS3A01G482000 chr4D 89.030 237 14 2 236 460 8892212 8891976 1.820000e-72 283.0
32 TraesCS3A01G482000 chr6B 86.547 223 28 2 239 460 77765826 77765605 8.560000e-61 244.0
33 TraesCS3A01G482000 chr6B 86.139 202 23 3 2502 2701 139629009 139629207 2.420000e-51 213.0
34 TraesCS3A01G482000 chr5B 85.470 234 30 4 236 468 538933913 538934143 1.110000e-59 241.0
35 TraesCS3A01G482000 chr5B 84.279 229 30 5 236 458 243406289 243406061 5.190000e-53 219.0
36 TraesCS3A01G482000 chr1D 84.513 226 31 3 236 460 316301014 316301236 1.440000e-53 220.0
37 TraesCS3A01G482000 chr1D 100.000 31 0 0 598 628 296895749 296895779 1.200000e-04 58.4
38 TraesCS3A01G482000 chr6A 82.379 227 37 2 2502 2727 228341218 228340994 8.750000e-46 195.0
39 TraesCS3A01G482000 chr4B 83.673 196 29 3 2506 2701 252965558 252965366 6.810000e-42 182.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G482000 chr3A 712697961 712701052 3091 False 2704.0 5276 100.0000 1 3092 2 chr3A.!!$F2 3091
1 TraesCS3A01G482000 chr3A 712725799 712729476 3677 True 969.5 987 83.4640 1021 2186 2 chr3A.!!$R2 1165
2 TraesCS3A01G482000 chr3A 713534568 713535484 916 True 442.0 442 75.8060 1156 2066 1 chr3A.!!$R1 910
3 TraesCS3A01G482000 chr3D 577381854 577383447 1593 False 2425.0 2425 94.1540 659 2255 1 chr3D.!!$F3 1596
4 TraesCS3A01G482000 chr3D 577409511 577414679 5168 True 1010.0 1031 83.7975 1155 2286 2 chr3D.!!$R2 1131
5 TraesCS3A01G482000 chr3D 577789261 577790177 916 True 475.0 475 76.4010 1156 2066 1 chr3D.!!$R1 910
6 TraesCS3A01G482000 chr3B 769398121 769399028 907 False 1131.0 1131 89.7800 716 1589 1 chr3B.!!$F2 873
7 TraesCS3A01G482000 chr3B 770556449 770558579 2130 False 1077.0 1847 86.0010 724 2506 2 chr3B.!!$F3 1782
8 TraesCS3A01G482000 chr3B 770652340 770653295 955 True 946.0 946 84.7920 1157 2101 1 chr3B.!!$R2 944
9 TraesCS3A01G482000 chr3B 770609036 770610055 1019 True 939.0 939 83.5440 1162 2171 1 chr3B.!!$R1 1009
10 TraesCS3A01G482000 chr7B 636398938 636400385 1447 True 333.0 339 84.0785 2743 3092 2 chr7B.!!$R1 349

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
612 613 0.101399 CGGCAGAAGCGATAGACACT 59.899 55.0 0.00 0.0 43.41 3.55 F
986 1019 0.174617 GCTACCTGAGGAGTGTCAGC 59.825 60.0 4.99 0.0 42.40 4.26 F
1674 5939 0.907704 TCCTGGCCAACGTGTATCCT 60.908 55.0 7.01 0.0 0.00 3.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1594 5859 0.038892 ATGTACGCGTCCTTGAACGT 60.039 50.000 18.63 5.61 44.38 3.99 R
1895 6160 0.793104 GTTGTACGCCTGCGCATTTC 60.793 55.000 12.24 1.57 44.19 2.17 R
2853 7497 2.224769 ACAATCCACGAGTTCCCAACAT 60.225 45.455 0.00 0.00 0.00 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
36 37 2.814341 CAGCTGGCAGAGTCGCAG 60.814 66.667 20.86 0.00 0.00 5.18
37 38 4.079850 AGCTGGCAGAGTCGCAGG 62.080 66.667 20.86 0.00 0.00 4.85
39 40 4.383861 CTGGCAGAGTCGCAGGCA 62.384 66.667 9.42 8.73 37.07 4.75
40 41 3.889134 CTGGCAGAGTCGCAGGCAA 62.889 63.158 9.42 0.00 38.09 4.52
41 42 2.669569 GGCAGAGTCGCAGGCAAA 60.670 61.111 8.77 0.00 0.00 3.68
42 43 2.260869 GGCAGAGTCGCAGGCAAAA 61.261 57.895 8.77 0.00 0.00 2.44
43 44 1.654220 GCAGAGTCGCAGGCAAAAA 59.346 52.632 2.68 0.00 0.00 1.94
57 58 3.351416 AAAAAGGACGGCGGCGTC 61.351 61.111 44.98 44.98 38.09 5.19
253 254 3.134127 GCCAATGAGCCACCGACC 61.134 66.667 0.00 0.00 0.00 4.79
254 255 2.350895 CCAATGAGCCACCGACCA 59.649 61.111 0.00 0.00 0.00 4.02
255 256 1.746615 CCAATGAGCCACCGACCAG 60.747 63.158 0.00 0.00 0.00 4.00
256 257 2.045926 AATGAGCCACCGACCAGC 60.046 61.111 0.00 0.00 0.00 4.85
257 258 2.894257 AATGAGCCACCGACCAGCA 61.894 57.895 0.00 0.00 0.00 4.41
258 259 2.809861 AATGAGCCACCGACCAGCAG 62.810 60.000 0.00 0.00 0.00 4.24
259 260 4.767255 GAGCCACCGACCAGCAGG 62.767 72.222 0.00 0.00 42.21 4.85
262 263 4.767255 CCACCGACCAGCAGGCTC 62.767 72.222 0.00 0.00 39.06 4.70
269 270 4.033776 CCAGCAGGCTCGGGGAAA 62.034 66.667 0.00 0.00 0.00 3.13
270 271 2.437359 CAGCAGGCTCGGGGAAAG 60.437 66.667 0.00 0.00 0.00 2.62
271 272 3.721706 AGCAGGCTCGGGGAAAGG 61.722 66.667 0.00 0.00 0.00 3.11
272 273 3.717294 GCAGGCTCGGGGAAAGGA 61.717 66.667 0.00 0.00 0.00 3.36
273 274 2.586792 CAGGCTCGGGGAAAGGAG 59.413 66.667 0.00 0.00 0.00 3.69
274 275 1.990060 CAGGCTCGGGGAAAGGAGA 60.990 63.158 0.00 0.00 31.90 3.71
275 276 1.229529 AGGCTCGGGGAAAGGAGAA 60.230 57.895 0.00 0.00 31.90 2.87
276 277 1.222113 GGCTCGGGGAAAGGAGAAG 59.778 63.158 0.00 0.00 31.90 2.85
277 278 1.222113 GCTCGGGGAAAGGAGAAGG 59.778 63.158 0.00 0.00 31.90 3.46
278 279 1.222113 CTCGGGGAAAGGAGAAGGC 59.778 63.158 0.00 0.00 31.90 4.35
279 280 2.125106 CGGGGAAAGGAGAAGGCG 60.125 66.667 0.00 0.00 0.00 5.52
280 281 2.656069 CGGGGAAAGGAGAAGGCGA 61.656 63.158 0.00 0.00 0.00 5.54
281 282 1.222113 GGGGAAAGGAGAAGGCGAG 59.778 63.158 0.00 0.00 0.00 5.03
282 283 1.450491 GGGAAAGGAGAAGGCGAGC 60.450 63.158 0.00 0.00 0.00 5.03
283 284 1.811679 GGAAAGGAGAAGGCGAGCG 60.812 63.158 0.00 0.00 0.00 5.03
284 285 1.079750 GAAAGGAGAAGGCGAGCGT 60.080 57.895 0.00 0.00 0.00 5.07
285 286 1.355066 GAAAGGAGAAGGCGAGCGTG 61.355 60.000 0.00 0.00 0.00 5.34
286 287 3.941657 AAGGAGAAGGCGAGCGTGC 62.942 63.158 0.00 0.00 0.00 5.34
315 316 3.564027 CCGACGCAAATCCGGCTC 61.564 66.667 0.00 0.00 36.62 4.70
316 317 2.813474 CGACGCAAATCCGGCTCA 60.813 61.111 0.00 0.00 33.03 4.26
317 318 2.387445 CGACGCAAATCCGGCTCAA 61.387 57.895 0.00 0.00 33.03 3.02
318 319 1.873165 GACGCAAATCCGGCTCAAA 59.127 52.632 0.00 0.00 32.31 2.69
319 320 0.239879 GACGCAAATCCGGCTCAAAA 59.760 50.000 0.00 0.00 32.31 2.44
320 321 0.671251 ACGCAAATCCGGCTCAAAAA 59.329 45.000 0.00 0.00 0.00 1.94
321 322 1.272212 ACGCAAATCCGGCTCAAAAAT 59.728 42.857 0.00 0.00 0.00 1.82
322 323 1.655099 CGCAAATCCGGCTCAAAAATG 59.345 47.619 0.00 0.00 0.00 2.32
323 324 2.670789 CGCAAATCCGGCTCAAAAATGA 60.671 45.455 0.00 0.00 0.00 2.57
324 325 3.324993 GCAAATCCGGCTCAAAAATGAA 58.675 40.909 0.00 0.00 0.00 2.57
325 326 3.123453 GCAAATCCGGCTCAAAAATGAAC 59.877 43.478 0.00 0.00 0.00 3.18
326 327 3.592898 AATCCGGCTCAAAAATGAACC 57.407 42.857 0.00 0.00 0.00 3.62
327 328 0.878416 TCCGGCTCAAAAATGAACCG 59.122 50.000 12.41 12.41 44.46 4.44
328 329 3.399879 CGGCTCAAAAATGAACCGG 57.600 52.632 11.71 0.00 42.06 5.28
329 330 0.109319 CGGCTCAAAAATGAACCGGG 60.109 55.000 6.32 0.00 42.06 5.73
330 331 1.253100 GGCTCAAAAATGAACCGGGA 58.747 50.000 6.32 0.00 0.00 5.14
331 332 1.824852 GGCTCAAAAATGAACCGGGAT 59.175 47.619 6.32 0.00 0.00 3.85
332 333 2.417243 GGCTCAAAAATGAACCGGGATG 60.417 50.000 6.32 0.00 0.00 3.51
333 334 2.417243 GCTCAAAAATGAACCGGGATGG 60.417 50.000 6.32 0.00 46.41 3.51
334 335 2.166254 CTCAAAAATGAACCGGGATGGG 59.834 50.000 6.32 0.00 44.64 4.00
335 336 1.899142 CAAAAATGAACCGGGATGGGT 59.101 47.619 6.32 0.00 44.44 4.51
351 352 3.652000 GTTGCCCGCGGACGAAAA 61.652 61.111 30.73 10.30 43.93 2.29
352 353 3.350612 TTGCCCGCGGACGAAAAG 61.351 61.111 30.73 9.14 43.93 2.27
358 359 4.130281 GCGGACGAAAAGCGGACG 62.130 66.667 0.00 0.00 46.49 4.79
359 360 4.130281 CGGACGAAAAGCGGACGC 62.130 66.667 8.91 8.91 46.49 5.19
372 373 3.708734 GACGCGTGTCCGTTTGGG 61.709 66.667 20.70 0.00 42.24 4.12
373 374 4.534141 ACGCGTGTCCGTTTGGGT 62.534 61.111 12.93 0.00 38.47 4.51
374 375 3.708734 CGCGTGTCCGTTTGGGTC 61.709 66.667 0.00 0.00 37.00 4.46
375 376 3.708734 GCGTGTCCGTTTGGGTCG 61.709 66.667 0.00 0.00 37.00 4.79
377 378 2.109593 GTGTCCGTTTGGGTCGGT 59.890 61.111 4.36 0.00 46.86 4.69
378 379 2.109387 TGTCCGTTTGGGTCGGTG 59.891 61.111 4.36 0.00 46.86 4.94
379 380 3.351416 GTCCGTTTGGGTCGGTGC 61.351 66.667 4.36 0.00 46.86 5.01
380 381 4.973055 TCCGTTTGGGTCGGTGCG 62.973 66.667 4.36 0.00 46.86 5.34
382 383 3.273834 CGTTTGGGTCGGTGCGTT 61.274 61.111 0.00 0.00 0.00 4.84
383 384 2.330041 GTTTGGGTCGGTGCGTTG 59.670 61.111 0.00 0.00 0.00 4.10
384 385 2.902846 TTTGGGTCGGTGCGTTGG 60.903 61.111 0.00 0.00 0.00 3.77
385 386 4.939368 TTGGGTCGGTGCGTTGGG 62.939 66.667 0.00 0.00 0.00 4.12
393 394 3.723348 GTGCGTTGGGCCGACTTC 61.723 66.667 21.44 13.18 42.61 3.01
394 395 3.936203 TGCGTTGGGCCGACTTCT 61.936 61.111 21.44 0.00 42.61 2.85
395 396 3.119096 GCGTTGGGCCGACTTCTC 61.119 66.667 21.44 4.69 34.80 2.87
396 397 2.657237 CGTTGGGCCGACTTCTCT 59.343 61.111 21.44 0.00 0.00 3.10
397 398 1.738099 CGTTGGGCCGACTTCTCTG 60.738 63.158 21.44 1.08 0.00 3.35
398 399 1.371558 GTTGGGCCGACTTCTCTGT 59.628 57.895 17.07 0.00 0.00 3.41
399 400 0.670854 GTTGGGCCGACTTCTCTGTC 60.671 60.000 17.07 0.00 0.00 3.51
400 401 1.827399 TTGGGCCGACTTCTCTGTCC 61.827 60.000 0.00 0.00 33.70 4.02
401 402 2.283529 GGGCCGACTTCTCTGTCCA 61.284 63.158 0.00 0.00 33.70 4.02
402 403 1.617947 GGGCCGACTTCTCTGTCCAT 61.618 60.000 0.00 0.00 33.70 3.41
403 404 0.460987 GGCCGACTTCTCTGTCCATG 60.461 60.000 0.00 0.00 33.70 3.66
404 405 1.086634 GCCGACTTCTCTGTCCATGC 61.087 60.000 0.00 0.00 33.70 4.06
405 406 0.460987 CCGACTTCTCTGTCCATGCC 60.461 60.000 0.00 0.00 33.70 4.40
406 407 0.803768 CGACTTCTCTGTCCATGCCG 60.804 60.000 0.00 0.00 33.70 5.69
407 408 0.532573 GACTTCTCTGTCCATGCCGA 59.467 55.000 0.00 0.00 0.00 5.54
408 409 0.247736 ACTTCTCTGTCCATGCCGAC 59.752 55.000 0.00 0.00 0.00 4.79
409 410 0.460987 CTTCTCTGTCCATGCCGACC 60.461 60.000 0.38 0.00 31.35 4.79
410 411 1.899437 TTCTCTGTCCATGCCGACCC 61.899 60.000 0.38 0.00 31.35 4.46
411 412 2.606213 TCTGTCCATGCCGACCCA 60.606 61.111 0.38 0.00 31.35 4.51
412 413 2.184020 CTCTGTCCATGCCGACCCAA 62.184 60.000 0.38 0.00 31.35 4.12
413 414 1.303236 CTGTCCATGCCGACCCAAA 60.303 57.895 0.38 0.00 31.35 3.28
414 415 1.586154 CTGTCCATGCCGACCCAAAC 61.586 60.000 0.38 0.00 31.35 2.93
415 416 2.359354 TCCATGCCGACCCAAACG 60.359 61.111 0.00 0.00 0.00 3.60
423 424 4.668118 GACCCAAACGGACGGCGA 62.668 66.667 16.62 0.00 34.64 5.54
424 425 4.974989 ACCCAAACGGACGGCGAC 62.975 66.667 16.62 7.58 34.64 5.19
436 437 3.515286 GGCGACGGACGAGATGGA 61.515 66.667 3.67 0.00 45.77 3.41
437 438 2.722487 GCGACGGACGAGATGGAT 59.278 61.111 3.67 0.00 45.77 3.41
438 439 1.370657 GCGACGGACGAGATGGATC 60.371 63.158 3.67 0.00 45.77 3.36
440 441 1.370657 GACGGACGAGATGGATCGC 60.371 63.158 0.00 0.00 46.60 4.58
441 442 2.049985 CGGACGAGATGGATCGCC 60.050 66.667 0.00 0.00 46.60 5.54
442 443 2.556459 CGGACGAGATGGATCGCCT 61.556 63.158 0.00 0.00 46.60 5.52
443 444 1.287503 GGACGAGATGGATCGCCTC 59.712 63.158 0.00 0.00 46.60 4.70
444 445 1.456196 GGACGAGATGGATCGCCTCA 61.456 60.000 0.00 0.00 46.60 3.86
445 446 0.600557 GACGAGATGGATCGCCTCAT 59.399 55.000 0.00 0.00 46.60 2.90
446 447 1.000283 GACGAGATGGATCGCCTCATT 60.000 52.381 0.00 0.00 46.60 2.57
447 448 1.269988 ACGAGATGGATCGCCTCATTG 60.270 52.381 0.00 0.00 46.60 2.82
448 449 1.805869 GAGATGGATCGCCTCATTGG 58.194 55.000 3.64 0.00 39.35 3.16
449 450 1.345741 GAGATGGATCGCCTCATTGGA 59.654 52.381 3.64 0.00 38.35 3.53
450 451 1.347050 AGATGGATCGCCTCATTGGAG 59.653 52.381 0.00 0.00 41.02 3.86
451 452 1.071385 GATGGATCGCCTCATTGGAGT 59.929 52.381 0.00 0.00 39.64 3.85
452 453 0.911769 TGGATCGCCTCATTGGAGTT 59.088 50.000 0.00 0.00 39.64 3.01
453 454 1.303309 GGATCGCCTCATTGGAGTTG 58.697 55.000 0.00 0.00 39.64 3.16
454 455 0.659957 GATCGCCTCATTGGAGTTGC 59.340 55.000 0.00 0.00 39.64 4.17
455 456 0.254178 ATCGCCTCATTGGAGTTGCT 59.746 50.000 0.00 0.00 39.64 3.91
456 457 0.391661 TCGCCTCATTGGAGTTGCTC 60.392 55.000 0.00 0.00 39.64 4.26
457 458 0.392193 CGCCTCATTGGAGTTGCTCT 60.392 55.000 0.00 0.00 39.64 4.09
458 459 1.831580 GCCTCATTGGAGTTGCTCTT 58.168 50.000 0.00 0.00 39.64 2.85
459 460 2.677902 CGCCTCATTGGAGTTGCTCTTA 60.678 50.000 0.00 0.00 39.64 2.10
460 461 3.549794 GCCTCATTGGAGTTGCTCTTAT 58.450 45.455 0.00 0.00 39.64 1.73
461 462 4.708177 GCCTCATTGGAGTTGCTCTTATA 58.292 43.478 0.00 0.00 39.64 0.98
462 463 5.312079 GCCTCATTGGAGTTGCTCTTATAT 58.688 41.667 0.00 0.00 39.64 0.86
463 464 5.411053 GCCTCATTGGAGTTGCTCTTATATC 59.589 44.000 0.00 0.00 39.64 1.63
464 465 5.636965 CCTCATTGGAGTTGCTCTTATATCG 59.363 44.000 0.00 0.00 39.64 2.92
465 466 5.541845 TCATTGGAGTTGCTCTTATATCGG 58.458 41.667 0.00 0.00 0.00 4.18
466 467 5.070446 TCATTGGAGTTGCTCTTATATCGGT 59.930 40.000 0.00 0.00 0.00 4.69
467 468 6.266786 TCATTGGAGTTGCTCTTATATCGGTA 59.733 38.462 0.00 0.00 0.00 4.02
468 469 6.665992 TTGGAGTTGCTCTTATATCGGTAT 57.334 37.500 0.00 0.00 0.00 2.73
469 470 6.268825 TGGAGTTGCTCTTATATCGGTATC 57.731 41.667 0.00 0.00 0.00 2.24
470 471 5.773176 TGGAGTTGCTCTTATATCGGTATCA 59.227 40.000 0.00 0.00 0.00 2.15
471 472 6.094061 GGAGTTGCTCTTATATCGGTATCAC 58.906 44.000 0.00 0.00 0.00 3.06
472 473 6.026947 AGTTGCTCTTATATCGGTATCACC 57.973 41.667 0.00 0.00 34.05 4.02
473 474 5.775701 AGTTGCTCTTATATCGGTATCACCT 59.224 40.000 0.00 0.00 35.66 4.00
474 475 5.899120 TGCTCTTATATCGGTATCACCTC 57.101 43.478 0.00 0.00 35.66 3.85
475 476 5.571285 TGCTCTTATATCGGTATCACCTCT 58.429 41.667 0.00 0.00 35.66 3.69
476 477 6.718294 TGCTCTTATATCGGTATCACCTCTA 58.282 40.000 0.00 0.00 35.66 2.43
477 478 7.347252 TGCTCTTATATCGGTATCACCTCTAT 58.653 38.462 0.00 0.00 35.66 1.98
478 479 8.491958 TGCTCTTATATCGGTATCACCTCTATA 58.508 37.037 0.00 0.00 35.66 1.31
479 480 9.339850 GCTCTTATATCGGTATCACCTCTATAA 57.660 37.037 0.00 1.54 35.66 0.98
485 486 9.924650 ATATCGGTATCACCTCTATAAAACAAC 57.075 33.333 0.00 0.00 35.66 3.32
486 487 7.172868 TCGGTATCACCTCTATAAAACAACA 57.827 36.000 0.00 0.00 35.66 3.33
487 488 7.613585 TCGGTATCACCTCTATAAAACAACAA 58.386 34.615 0.00 0.00 35.66 2.83
488 489 8.095792 TCGGTATCACCTCTATAAAACAACAAA 58.904 33.333 0.00 0.00 35.66 2.83
489 490 8.388103 CGGTATCACCTCTATAAAACAACAAAG 58.612 37.037 0.00 0.00 35.66 2.77
490 491 9.227777 GGTATCACCTCTATAAAACAACAAAGT 57.772 33.333 0.00 0.00 34.73 2.66
493 494 8.842358 TCACCTCTATAAAACAACAAAGTAGG 57.158 34.615 0.00 0.00 0.00 3.18
494 495 8.653191 TCACCTCTATAAAACAACAAAGTAGGA 58.347 33.333 0.00 0.00 0.00 2.94
495 496 8.718734 CACCTCTATAAAACAACAAAGTAGGAC 58.281 37.037 0.00 0.00 0.00 3.85
496 497 8.434392 ACCTCTATAAAACAACAAAGTAGGACA 58.566 33.333 0.00 0.00 0.00 4.02
497 498 8.936864 CCTCTATAAAACAACAAAGTAGGACAG 58.063 37.037 0.00 0.00 0.00 3.51
498 499 8.319143 TCTATAAAACAACAAAGTAGGACAGC 57.681 34.615 0.00 0.00 0.00 4.40
499 500 6.952773 ATAAAACAACAAAGTAGGACAGCA 57.047 33.333 0.00 0.00 0.00 4.41
500 501 5.652994 AAAACAACAAAGTAGGACAGCAA 57.347 34.783 0.00 0.00 0.00 3.91
501 502 4.632538 AACAACAAAGTAGGACAGCAAC 57.367 40.909 0.00 0.00 0.00 4.17
502 503 3.886123 ACAACAAAGTAGGACAGCAACT 58.114 40.909 0.00 0.00 0.00 3.16
503 504 4.270008 ACAACAAAGTAGGACAGCAACTT 58.730 39.130 0.00 0.00 35.01 2.66
504 505 4.096382 ACAACAAAGTAGGACAGCAACTTG 59.904 41.667 0.00 0.00 33.85 3.16
505 506 3.886123 ACAAAGTAGGACAGCAACTTGT 58.114 40.909 0.00 0.00 33.85 3.16
506 507 3.627577 ACAAAGTAGGACAGCAACTTGTG 59.372 43.478 0.00 0.00 33.85 3.33
507 508 3.838244 AAGTAGGACAGCAACTTGTGA 57.162 42.857 0.00 0.00 32.38 3.58
508 509 4.357918 AAGTAGGACAGCAACTTGTGAT 57.642 40.909 0.00 0.00 32.38 3.06
509 510 3.931578 AGTAGGACAGCAACTTGTGATC 58.068 45.455 0.00 0.00 0.00 2.92
510 511 2.191128 AGGACAGCAACTTGTGATCC 57.809 50.000 0.00 0.00 0.00 3.36
511 512 1.421268 AGGACAGCAACTTGTGATCCA 59.579 47.619 8.94 0.00 31.03 3.41
512 513 2.158623 AGGACAGCAACTTGTGATCCAA 60.159 45.455 8.94 0.00 31.03 3.53
513 514 2.622942 GGACAGCAACTTGTGATCCAAA 59.377 45.455 0.00 0.00 31.20 3.28
514 515 3.068024 GGACAGCAACTTGTGATCCAAAA 59.932 43.478 0.00 0.00 31.20 2.44
515 516 4.441356 GGACAGCAACTTGTGATCCAAAAA 60.441 41.667 0.00 0.00 31.20 1.94
542 543 8.251750 TCAAATCGTTTCTTCACTACTAATGG 57.748 34.615 0.00 0.00 0.00 3.16
543 544 8.092068 TCAAATCGTTTCTTCACTACTAATGGA 58.908 33.333 0.00 0.00 0.00 3.41
544 545 8.883731 CAAATCGTTTCTTCACTACTAATGGAT 58.116 33.333 0.00 0.00 0.00 3.41
545 546 8.425577 AATCGTTTCTTCACTACTAATGGATG 57.574 34.615 0.00 0.00 0.00 3.51
546 547 7.165460 TCGTTTCTTCACTACTAATGGATGA 57.835 36.000 0.00 0.00 0.00 2.92
547 548 7.782049 TCGTTTCTTCACTACTAATGGATGAT 58.218 34.615 0.00 0.00 0.00 2.45
548 549 8.909923 TCGTTTCTTCACTACTAATGGATGATA 58.090 33.333 0.00 0.00 0.00 2.15
549 550 9.698309 CGTTTCTTCACTACTAATGGATGATAT 57.302 33.333 0.00 0.00 0.00 1.63
555 556 9.480861 TTCACTACTAATGGATGATATAGAGGG 57.519 37.037 0.00 0.00 0.00 4.30
556 557 8.624670 TCACTACTAATGGATGATATAGAGGGT 58.375 37.037 0.00 0.00 0.00 4.34
557 558 9.922477 CACTACTAATGGATGATATAGAGGGTA 57.078 37.037 0.00 0.00 0.00 3.69
599 600 2.623878 TTTTTGTACAGACCGGCAGA 57.376 45.000 0.00 0.00 0.00 4.26
600 601 2.623878 TTTTGTACAGACCGGCAGAA 57.376 45.000 0.00 0.00 0.00 3.02
601 602 2.163818 TTTGTACAGACCGGCAGAAG 57.836 50.000 0.00 0.00 0.00 2.85
602 603 0.320421 TTGTACAGACCGGCAGAAGC 60.320 55.000 0.00 0.00 41.10 3.86
603 604 1.805945 GTACAGACCGGCAGAAGCG 60.806 63.158 0.00 0.00 43.41 4.68
604 605 1.974875 TACAGACCGGCAGAAGCGA 60.975 57.895 0.00 0.00 43.41 4.93
605 606 1.320344 TACAGACCGGCAGAAGCGAT 61.320 55.000 0.00 0.00 43.41 4.58
606 607 1.320344 ACAGACCGGCAGAAGCGATA 61.320 55.000 0.00 0.00 43.41 2.92
607 608 0.596083 CAGACCGGCAGAAGCGATAG 60.596 60.000 0.00 0.00 43.41 2.08
608 609 0.752009 AGACCGGCAGAAGCGATAGA 60.752 55.000 0.00 0.00 43.41 1.98
609 610 0.595310 GACCGGCAGAAGCGATAGAC 60.595 60.000 0.00 0.00 43.41 2.59
610 611 1.320344 ACCGGCAGAAGCGATAGACA 61.320 55.000 0.00 0.00 43.41 3.41
611 612 0.872021 CCGGCAGAAGCGATAGACAC 60.872 60.000 0.00 0.00 43.41 3.67
612 613 0.101399 CGGCAGAAGCGATAGACACT 59.899 55.000 0.00 0.00 43.41 3.55
613 614 1.469940 CGGCAGAAGCGATAGACACTT 60.470 52.381 0.00 0.00 43.41 3.16
614 615 2.622436 GGCAGAAGCGATAGACACTTT 58.378 47.619 0.00 0.00 43.41 2.66
615 616 3.733988 CGGCAGAAGCGATAGACACTTTA 60.734 47.826 0.00 0.00 43.41 1.85
616 617 4.372656 GGCAGAAGCGATAGACACTTTAT 58.627 43.478 0.00 0.00 43.41 1.40
617 618 4.811557 GGCAGAAGCGATAGACACTTTATT 59.188 41.667 0.00 0.00 43.41 1.40
618 619 5.983720 GGCAGAAGCGATAGACACTTTATTA 59.016 40.000 0.00 0.00 43.41 0.98
619 620 6.647067 GGCAGAAGCGATAGACACTTTATTAT 59.353 38.462 0.00 0.00 43.41 1.28
620 621 7.171678 GGCAGAAGCGATAGACACTTTATTATT 59.828 37.037 0.00 0.00 43.41 1.40
621 622 9.193133 GCAGAAGCGATAGACACTTTATTATTA 57.807 33.333 0.00 0.00 39.76 0.98
623 624 9.915629 AGAAGCGATAGACACTTTATTATTAGG 57.084 33.333 0.00 0.00 39.76 2.69
624 625 9.694137 GAAGCGATAGACACTTTATTATTAGGT 57.306 33.333 0.00 0.00 39.76 3.08
691 692 7.976175 GGGAAAAATATGAAGGTGACAATTCTC 59.024 37.037 2.25 0.00 0.00 2.87
692 693 8.743714 GGAAAAATATGAAGGTGACAATTCTCT 58.256 33.333 2.25 0.00 0.00 3.10
693 694 9.780413 GAAAAATATGAAGGTGACAATTCTCTC 57.220 33.333 2.25 0.00 0.00 3.20
694 695 7.545362 AAATATGAAGGTGACAATTCTCTCG 57.455 36.000 2.25 0.00 0.00 4.04
760 767 2.943033 ACAGTTGGAAGTTTGGAACTCG 59.057 45.455 0.00 0.00 41.91 4.18
761 768 2.290641 CAGTTGGAAGTTTGGAACTCGG 59.709 50.000 0.00 0.00 41.91 4.63
762 769 2.171870 AGTTGGAAGTTTGGAACTCGGA 59.828 45.455 0.00 0.00 41.91 4.55
763 770 2.249844 TGGAAGTTTGGAACTCGGAC 57.750 50.000 0.00 0.00 41.91 4.79
764 771 1.766496 TGGAAGTTTGGAACTCGGACT 59.234 47.619 0.00 0.00 41.91 3.85
765 772 2.224209 TGGAAGTTTGGAACTCGGACTC 60.224 50.000 0.00 0.00 41.91 3.36
782 789 2.807470 CATGTACGCACGGTCGCA 60.807 61.111 0.00 0.00 0.00 5.10
870 883 2.869801 CCAACTACGAACTTGCAACTCA 59.130 45.455 0.00 0.00 0.00 3.41
879 892 4.494484 GAACTTGCAACTCACCAAACTTT 58.506 39.130 0.00 0.00 0.00 2.66
882 895 4.220602 ACTTGCAACTCACCAAACTTTTCT 59.779 37.500 0.00 0.00 0.00 2.52
980 1013 2.754002 GTTTCGTAGCTACCTGAGGAGT 59.246 50.000 18.16 0.00 0.00 3.85
986 1019 0.174617 GCTACCTGAGGAGTGTCAGC 59.825 60.000 4.99 0.00 42.40 4.26
1095 1142 2.033194 GCTACCAACCTGCACGACC 61.033 63.158 0.00 0.00 0.00 4.79
1160 1215 1.128507 CGCAATGTTATCGTGTGCAGT 59.871 47.619 0.00 0.00 34.87 4.40
1280 1341 3.900892 CATCTACGCGCCGGACCT 61.901 66.667 5.05 0.00 0.00 3.85
1294 1355 4.719106 ACCTCGAGACGCTCCGGT 62.719 66.667 15.71 0.00 0.00 5.28
1437 1501 1.443872 CCGCTTCAAGTACGTCGCT 60.444 57.895 0.00 0.00 0.00 4.93
1671 5936 1.078426 GCTCCTGGCCAACGTGTAT 60.078 57.895 7.01 0.00 34.27 2.29
1674 5939 0.907704 TCCTGGCCAACGTGTATCCT 60.908 55.000 7.01 0.00 0.00 3.24
1680 5945 3.244630 TGGCCAACGTGTATCCTTACTTT 60.245 43.478 0.61 0.00 0.00 2.66
1798 6063 4.673298 ACGCCATGGTCGACGCAA 62.673 61.111 27.68 0.00 0.00 4.85
1857 6122 1.032657 CCATCGTGGTCTCCGAGAGT 61.033 60.000 0.00 0.00 37.81 3.24
1920 6185 1.019278 CGCAGGCGTACAACCAGAAT 61.019 55.000 5.34 0.00 34.35 2.40
2136 6762 4.395625 TGCCTGCATACGTATCTACTACT 58.604 43.478 4.74 0.00 0.00 2.57
2152 6787 7.204496 TCTACTACTTCGATCTCAATAAGCC 57.796 40.000 0.00 0.00 0.00 4.35
2210 6845 8.524487 AGGTAAGATCGGTGATATGAATAAGAC 58.476 37.037 0.00 0.00 0.00 3.01
2229 6864 6.469782 AAGACCCATTATGTTGCATAAAGG 57.530 37.500 13.24 13.24 0.00 3.11
2255 6890 4.552355 GTTTCCCCTTCCGTACAAAAATG 58.448 43.478 0.00 0.00 0.00 2.32
2271 6906 7.784633 ACAAAAATGTTGTTAACTTGGGATG 57.215 32.000 7.22 0.15 0.00 3.51
2275 6910 7.589958 AAATGTTGTTAACTTGGGATGTACA 57.410 32.000 7.22 0.00 0.00 2.90
2277 6912 4.517453 TGTTGTTAACTTGGGATGTACAGC 59.483 41.667 1.50 1.50 0.00 4.40
2286 6921 3.417101 TGGGATGTACAGCGTTTGATTT 58.583 40.909 4.81 0.00 0.00 2.17
2287 6922 3.438781 TGGGATGTACAGCGTTTGATTTC 59.561 43.478 4.81 0.00 0.00 2.17
2289 6924 4.403453 GGATGTACAGCGTTTGATTTCAC 58.597 43.478 4.81 0.00 0.00 3.18
2292 6927 3.310227 TGTACAGCGTTTGATTTCACGTT 59.690 39.130 0.00 0.00 38.70 3.99
2306 6941 7.424803 TGATTTCACGTTCAAATTTGACTGAT 58.575 30.769 20.35 7.68 36.83 2.90
2315 6950 6.198650 TCAAATTTGACTGATATGCCACTG 57.801 37.500 16.91 0.00 31.01 3.66
2322 6957 5.255687 TGACTGATATGCCACTGAAATTGT 58.744 37.500 0.00 0.00 0.00 2.71
2323 6958 5.124297 TGACTGATATGCCACTGAAATTGTG 59.876 40.000 0.00 0.00 35.39 3.33
2336 6971 7.309377 CCACTGAAATTGTGTTGATGGAATAGT 60.309 37.037 0.00 0.00 33.92 2.12
2348 6983 9.913310 TGTTGATGGAATAGTTAAATCATACCA 57.087 29.630 0.00 0.00 0.00 3.25
2350 6985 8.601845 TGATGGAATAGTTAAATCATACCACG 57.398 34.615 0.00 0.00 0.00 4.94
2351 6986 8.208224 TGATGGAATAGTTAAATCATACCACGT 58.792 33.333 0.00 0.00 0.00 4.49
2352 6987 8.603242 ATGGAATAGTTAAATCATACCACGTC 57.397 34.615 0.00 0.00 0.00 4.34
2353 6988 6.987992 TGGAATAGTTAAATCATACCACGTCC 59.012 38.462 0.00 0.00 0.00 4.79
2354 6989 7.147620 TGGAATAGTTAAATCATACCACGTCCT 60.148 37.037 0.00 0.00 0.00 3.85
2355 6990 8.362639 GGAATAGTTAAATCATACCACGTCCTA 58.637 37.037 0.00 0.00 0.00 2.94
2356 6991 9.189723 GAATAGTTAAATCATACCACGTCCTAC 57.810 37.037 0.00 0.00 0.00 3.18
2357 6992 5.910614 AGTTAAATCATACCACGTCCTACC 58.089 41.667 0.00 0.00 0.00 3.18
2358 6993 5.659971 AGTTAAATCATACCACGTCCTACCT 59.340 40.000 0.00 0.00 0.00 3.08
2359 6994 6.155737 AGTTAAATCATACCACGTCCTACCTT 59.844 38.462 0.00 0.00 0.00 3.50
2360 6995 5.431179 AAATCATACCACGTCCTACCTTT 57.569 39.130 0.00 0.00 0.00 3.11
2361 6996 5.431179 AATCATACCACGTCCTACCTTTT 57.569 39.130 0.00 0.00 0.00 2.27
2362 6997 4.895668 TCATACCACGTCCTACCTTTTT 57.104 40.909 0.00 0.00 0.00 1.94
2400 7035 3.191371 CGTCCTACCTAGTTTTACACGGT 59.809 47.826 0.00 0.00 0.00 4.83
2402 7037 4.021981 GTCCTACCTAGTTTTACACGGTGT 60.022 45.833 18.89 18.89 0.00 4.16
2404 7039 4.219288 CCTACCTAGTTTTACACGGTGTCT 59.781 45.833 18.43 11.00 0.00 3.41
2411 7054 2.228138 TTACACGGTGTCTGGTCAAC 57.772 50.000 18.43 0.00 0.00 3.18
2423 7066 3.438781 GTCTGGTCAACACAAGTCAAACA 59.561 43.478 0.00 0.00 0.00 2.83
2424 7067 3.438781 TCTGGTCAACACAAGTCAAACAC 59.561 43.478 0.00 0.00 0.00 3.32
2427 7070 3.413558 GTCAACACAAGTCAAACACGAC 58.586 45.455 0.00 0.00 36.08 4.34
2428 7071 2.417239 TCAACACAAGTCAAACACGACC 59.583 45.455 0.00 0.00 36.52 4.79
2429 7072 2.102070 ACACAAGTCAAACACGACCA 57.898 45.000 0.00 0.00 36.52 4.02
2460 7103 3.581755 CAAACAAGCCCATGATCAACAG 58.418 45.455 0.00 0.00 0.00 3.16
2471 7114 4.630505 CCATGATCAACAGAAGTCACAGAG 59.369 45.833 0.00 0.00 0.00 3.35
2472 7115 5.476614 CATGATCAACAGAAGTCACAGAGA 58.523 41.667 0.00 0.00 0.00 3.10
2487 7131 7.101652 GTCACAGAGACAAGTCCATATAGAA 57.898 40.000 0.00 0.00 46.77 2.10
2488 7132 6.975772 GTCACAGAGACAAGTCCATATAGAAC 59.024 42.308 0.00 0.00 46.77 3.01
2494 7138 6.565234 AGACAAGTCCATATAGAACGTCTTG 58.435 40.000 0.00 0.00 37.58 3.02
2496 7140 5.187186 ACAAGTCCATATAGAACGTCTTGGT 59.813 40.000 10.00 0.00 36.42 3.67
2497 7141 5.517322 AGTCCATATAGAACGTCTTGGTC 57.483 43.478 0.00 0.00 0.00 4.02
2498 7142 4.036498 AGTCCATATAGAACGTCTTGGTCG 59.964 45.833 0.00 0.00 0.00 4.79
2500 7144 4.036027 TCCATATAGAACGTCTTGGTCGAC 59.964 45.833 7.13 7.13 0.00 4.20
2510 7154 4.612932 GTCTTGGTCGACGAGTAATAGT 57.387 45.455 9.92 0.00 32.04 2.12
2511 7155 4.979388 GTCTTGGTCGACGAGTAATAGTT 58.021 43.478 9.92 0.00 32.04 2.24
2512 7156 6.111768 GTCTTGGTCGACGAGTAATAGTTA 57.888 41.667 9.92 0.00 32.04 2.24
2513 7157 6.723282 GTCTTGGTCGACGAGTAATAGTTAT 58.277 40.000 9.92 0.00 32.04 1.89
2514 7158 7.192232 GTCTTGGTCGACGAGTAATAGTTATT 58.808 38.462 9.92 0.00 32.04 1.40
2515 7159 7.375544 GTCTTGGTCGACGAGTAATAGTTATTC 59.624 40.741 9.92 0.00 32.04 1.75
2516 7160 6.932356 TGGTCGACGAGTAATAGTTATTCT 57.068 37.500 9.92 0.00 0.00 2.40
2517 7161 7.325660 TGGTCGACGAGTAATAGTTATTCTT 57.674 36.000 9.92 0.00 0.00 2.52
2518 7162 7.412853 TGGTCGACGAGTAATAGTTATTCTTC 58.587 38.462 9.92 0.00 0.00 2.87
2519 7163 7.066163 TGGTCGACGAGTAATAGTTATTCTTCA 59.934 37.037 9.92 0.00 0.00 3.02
2520 7164 7.375544 GGTCGACGAGTAATAGTTATTCTTCAC 59.624 40.741 9.92 0.00 0.00 3.18
2521 7165 7.375544 GTCGACGAGTAATAGTTATTCTTCACC 59.624 40.741 0.00 0.00 0.00 4.02
2522 7166 6.636044 CGACGAGTAATAGTTATTCTTCACCC 59.364 42.308 0.00 0.00 0.00 4.61
2523 7167 6.814043 ACGAGTAATAGTTATTCTTCACCCC 58.186 40.000 0.00 0.00 0.00 4.95
2524 7168 6.610425 ACGAGTAATAGTTATTCTTCACCCCT 59.390 38.462 0.00 0.00 0.00 4.79
2525 7169 7.125356 ACGAGTAATAGTTATTCTTCACCCCTT 59.875 37.037 0.00 0.00 0.00 3.95
2526 7170 7.985752 CGAGTAATAGTTATTCTTCACCCCTTT 59.014 37.037 0.00 0.00 0.00 3.11
2538 7182 8.713708 TTCTTCACCCCTTTATTTTAACATCA 57.286 30.769 0.00 0.00 0.00 3.07
2539 7183 8.713708 TCTTCACCCCTTTATTTTAACATCAA 57.286 30.769 0.00 0.00 0.00 2.57
2540 7184 8.581578 TCTTCACCCCTTTATTTTAACATCAAC 58.418 33.333 0.00 0.00 0.00 3.18
2541 7185 7.841282 TCACCCCTTTATTTTAACATCAACA 57.159 32.000 0.00 0.00 0.00 3.33
2542 7186 7.662897 TCACCCCTTTATTTTAACATCAACAC 58.337 34.615 0.00 0.00 0.00 3.32
2543 7187 7.287927 TCACCCCTTTATTTTAACATCAACACA 59.712 33.333 0.00 0.00 0.00 3.72
2544 7188 8.093927 CACCCCTTTATTTTAACATCAACACAT 58.906 33.333 0.00 0.00 0.00 3.21
2545 7189 8.311109 ACCCCTTTATTTTAACATCAACACATC 58.689 33.333 0.00 0.00 0.00 3.06
2546 7190 7.487829 CCCCTTTATTTTAACATCAACACATCG 59.512 37.037 0.00 0.00 0.00 3.84
2547 7191 8.026607 CCCTTTATTTTAACATCAACACATCGT 58.973 33.333 0.00 0.00 0.00 3.73
2571 7215 8.272436 GTAATTTTACGTTCCGTCAATTTTGT 57.728 30.769 0.00 0.00 41.54 2.83
2572 7216 6.979701 ATTTTACGTTCCGTCAATTTTGTC 57.020 33.333 0.00 0.00 41.54 3.18
2573 7217 5.738118 TTTACGTTCCGTCAATTTTGTCT 57.262 34.783 0.00 0.00 41.54 3.41
2574 7218 5.738118 TTACGTTCCGTCAATTTTGTCTT 57.262 34.783 0.00 0.00 41.54 3.01
2575 7219 6.841443 TTACGTTCCGTCAATTTTGTCTTA 57.159 33.333 0.00 0.00 41.54 2.10
2576 7220 5.934935 ACGTTCCGTCAATTTTGTCTTAT 57.065 34.783 0.00 0.00 33.69 1.73
2577 7221 6.308371 ACGTTCCGTCAATTTTGTCTTATT 57.692 33.333 0.00 0.00 33.69 1.40
2578 7222 6.731164 ACGTTCCGTCAATTTTGTCTTATTT 58.269 32.000 0.00 0.00 33.69 1.40
2579 7223 7.197703 ACGTTCCGTCAATTTTGTCTTATTTT 58.802 30.769 0.00 0.00 33.69 1.82
2580 7224 8.344098 ACGTTCCGTCAATTTTGTCTTATTTTA 58.656 29.630 0.00 0.00 33.69 1.52
2581 7225 9.171701 CGTTCCGTCAATTTTGTCTTATTTTAA 57.828 29.630 0.00 0.00 0.00 1.52
2584 7228 9.171701 TCCGTCAATTTTGTCTTATTTTAAACG 57.828 29.630 0.00 0.00 0.00 3.60
2585 7229 8.960075 CCGTCAATTTTGTCTTATTTTAAACGT 58.040 29.630 0.00 0.00 0.00 3.99
2705 7349 6.907206 AAATGCAATTTTTATGGTCCGATG 57.093 33.333 0.00 0.00 46.10 3.84
2706 7350 5.850557 ATGCAATTTTTATGGTCCGATGA 57.149 34.783 0.00 0.00 0.00 2.92
2707 7351 4.992688 TGCAATTTTTATGGTCCGATGAC 58.007 39.130 0.00 0.00 40.98 3.06
2719 7363 4.016113 GTCCGATGACCTACATTTTTGC 57.984 45.455 0.00 0.00 39.56 3.68
2720 7364 3.689649 GTCCGATGACCTACATTTTTGCT 59.310 43.478 0.00 0.00 39.56 3.91
2721 7365 4.156008 GTCCGATGACCTACATTTTTGCTT 59.844 41.667 0.00 0.00 39.56 3.91
2722 7366 4.764823 TCCGATGACCTACATTTTTGCTTT 59.235 37.500 0.00 0.00 39.56 3.51
2723 7367 5.095490 CCGATGACCTACATTTTTGCTTTC 58.905 41.667 0.00 0.00 39.56 2.62
2724 7368 5.335583 CCGATGACCTACATTTTTGCTTTCA 60.336 40.000 0.00 0.00 39.56 2.69
2725 7369 6.324819 CGATGACCTACATTTTTGCTTTCAT 58.675 36.000 0.00 0.00 39.56 2.57
2726 7370 7.415095 CCGATGACCTACATTTTTGCTTTCATA 60.415 37.037 0.00 0.00 39.56 2.15
2727 7371 7.429340 CGATGACCTACATTTTTGCTTTCATAC 59.571 37.037 0.00 0.00 39.56 2.39
2728 7372 7.517614 TGACCTACATTTTTGCTTTCATACA 57.482 32.000 0.00 0.00 0.00 2.29
2729 7373 7.367285 TGACCTACATTTTTGCTTTCATACAC 58.633 34.615 0.00 0.00 0.00 2.90
2730 7374 7.013750 TGACCTACATTTTTGCTTTCATACACA 59.986 33.333 0.00 0.00 0.00 3.72
2731 7375 7.145323 ACCTACATTTTTGCTTTCATACACAC 58.855 34.615 0.00 0.00 0.00 3.82
2732 7376 7.144661 CCTACATTTTTGCTTTCATACACACA 58.855 34.615 0.00 0.00 0.00 3.72
2733 7377 6.826893 ACATTTTTGCTTTCATACACACAC 57.173 33.333 0.00 0.00 0.00 3.82
2734 7378 6.336566 ACATTTTTGCTTTCATACACACACA 58.663 32.000 0.00 0.00 0.00 3.72
2735 7379 6.255453 ACATTTTTGCTTTCATACACACACAC 59.745 34.615 0.00 0.00 0.00 3.82
2736 7380 4.972514 TTTGCTTTCATACACACACACA 57.027 36.364 0.00 0.00 0.00 3.72
2737 7381 3.961477 TGCTTTCATACACACACACAC 57.039 42.857 0.00 0.00 0.00 3.82
2738 7382 3.274288 TGCTTTCATACACACACACACA 58.726 40.909 0.00 0.00 0.00 3.72
2739 7383 3.064682 TGCTTTCATACACACACACACAC 59.935 43.478 0.00 0.00 0.00 3.82
2740 7384 3.064682 GCTTTCATACACACACACACACA 59.935 43.478 0.00 0.00 0.00 3.72
2741 7385 4.438065 GCTTTCATACACACACACACACAA 60.438 41.667 0.00 0.00 0.00 3.33
2747 7391 7.210873 TCATACACACACACACACAATAGTAA 58.789 34.615 0.00 0.00 0.00 2.24
2749 7393 6.935741 ACACACACACACACAATAGTAAAT 57.064 33.333 0.00 0.00 0.00 1.40
2775 7419 7.881142 ACTAGTAATTTGTATGTGCTTTGCAA 58.119 30.769 0.00 0.00 41.47 4.08
2876 7520 1.890876 TGGGAACTCGTGGATTGTTG 58.109 50.000 0.00 0.00 0.00 3.33
2877 7521 1.142060 TGGGAACTCGTGGATTGTTGT 59.858 47.619 0.00 0.00 0.00 3.32
2900 7544 6.739100 TGTTTACAATTCGTATCAAATCACGC 59.261 34.615 0.00 0.00 38.05 5.34
2902 7546 7.758613 TTACAATTCGTATCAAATCACGCTA 57.241 32.000 0.00 0.00 38.05 4.26
2907 7551 2.857748 CGTATCAAATCACGCTAGCACA 59.142 45.455 16.45 0.00 0.00 4.57
2909 7553 4.025730 CGTATCAAATCACGCTAGCACAAT 60.026 41.667 16.45 1.01 0.00 2.71
2976 7623 5.160641 TCCAAAAAGAAATGCTATTGACGC 58.839 37.500 0.00 0.00 0.00 5.19
2988 7635 3.538392 GCTATTGACGCGTTTGTGAAATC 59.462 43.478 15.53 0.00 0.00 2.17
2991 7638 3.247563 TGACGCGTTTGTGAAATCTTC 57.752 42.857 15.53 0.00 0.00 2.87
2994 7641 4.688879 TGACGCGTTTGTGAAATCTTCTAT 59.311 37.500 15.53 0.00 0.00 1.98
3063 8805 9.757227 TGTTATAATTTTCACCTTTCCAAACTG 57.243 29.630 0.00 0.00 0.00 3.16
3076 8820 5.508200 TTCCAAACTGTGCGTTTTCTTAT 57.492 34.783 0.00 0.00 43.06 1.73
3081 8825 7.974501 TCCAAACTGTGCGTTTTCTTATAAAAA 59.025 29.630 0.00 0.00 43.06 1.94
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 4.790962 CTGCTGCCGCCTCCACAT 62.791 66.667 0.00 0.00 34.43 3.21
14 15 4.719106 ACTCTGCCAGCTGCTGCC 62.719 66.667 23.86 14.30 42.00 4.85
15 16 3.126225 GACTCTGCCAGCTGCTGC 61.126 66.667 23.86 18.48 42.00 5.25
16 17 2.814341 CGACTCTGCCAGCTGCTG 60.814 66.667 22.44 22.44 42.00 4.41
17 18 4.756458 GCGACTCTGCCAGCTGCT 62.756 66.667 8.66 0.00 42.00 4.24
19 20 2.814341 CTGCGACTCTGCCAGCTG 60.814 66.667 6.78 6.78 0.00 4.24
20 21 4.079850 CCTGCGACTCTGCCAGCT 62.080 66.667 0.00 0.00 0.00 4.24
22 23 3.889134 TTGCCTGCGACTCTGCCAG 62.889 63.158 0.00 0.00 0.00 4.85
23 24 2.956799 TTTTGCCTGCGACTCTGCCA 62.957 55.000 0.00 0.00 0.00 4.92
24 25 1.795170 TTTTTGCCTGCGACTCTGCC 61.795 55.000 0.00 0.00 0.00 4.85
25 26 1.654220 TTTTTGCCTGCGACTCTGC 59.346 52.632 0.00 0.00 0.00 4.26
236 237 3.134127 GGTCGGTGGCTCATTGGC 61.134 66.667 0.00 0.00 42.18 4.52
237 238 1.746615 CTGGTCGGTGGCTCATTGG 60.747 63.158 0.00 0.00 0.00 3.16
238 239 2.401766 GCTGGTCGGTGGCTCATTG 61.402 63.158 0.00 0.00 0.00 2.82
239 240 2.045926 GCTGGTCGGTGGCTCATT 60.046 61.111 0.00 0.00 0.00 2.57
240 241 3.320879 CTGCTGGTCGGTGGCTCAT 62.321 63.158 0.00 0.00 0.00 2.90
241 242 4.007644 CTGCTGGTCGGTGGCTCA 62.008 66.667 0.00 0.00 0.00 4.26
242 243 4.767255 CCTGCTGGTCGGTGGCTC 62.767 72.222 0.51 0.00 0.00 4.70
245 246 4.767255 GAGCCTGCTGGTCGGTGG 62.767 72.222 11.69 0.00 35.27 4.61
252 253 3.984193 CTTTCCCCGAGCCTGCTGG 62.984 68.421 5.03 5.03 0.00 4.85
253 254 2.437359 CTTTCCCCGAGCCTGCTG 60.437 66.667 0.00 0.00 0.00 4.41
254 255 3.721706 CCTTTCCCCGAGCCTGCT 61.722 66.667 0.00 0.00 0.00 4.24
255 256 3.689002 CTCCTTTCCCCGAGCCTGC 62.689 68.421 0.00 0.00 0.00 4.85
256 257 1.553690 TTCTCCTTTCCCCGAGCCTG 61.554 60.000 0.00 0.00 0.00 4.85
257 258 1.229529 TTCTCCTTTCCCCGAGCCT 60.230 57.895 0.00 0.00 0.00 4.58
258 259 1.222113 CTTCTCCTTTCCCCGAGCC 59.778 63.158 0.00 0.00 0.00 4.70
259 260 1.222113 CCTTCTCCTTTCCCCGAGC 59.778 63.158 0.00 0.00 0.00 5.03
260 261 1.222113 GCCTTCTCCTTTCCCCGAG 59.778 63.158 0.00 0.00 0.00 4.63
261 262 2.656069 CGCCTTCTCCTTTCCCCGA 61.656 63.158 0.00 0.00 0.00 5.14
262 263 2.125106 CGCCTTCTCCTTTCCCCG 60.125 66.667 0.00 0.00 0.00 5.73
263 264 1.222113 CTCGCCTTCTCCTTTCCCC 59.778 63.158 0.00 0.00 0.00 4.81
264 265 1.450491 GCTCGCCTTCTCCTTTCCC 60.450 63.158 0.00 0.00 0.00 3.97
265 266 1.811679 CGCTCGCCTTCTCCTTTCC 60.812 63.158 0.00 0.00 0.00 3.13
266 267 1.079750 ACGCTCGCCTTCTCCTTTC 60.080 57.895 0.00 0.00 0.00 2.62
267 268 1.374758 CACGCTCGCCTTCTCCTTT 60.375 57.895 0.00 0.00 0.00 3.11
268 269 2.262915 CACGCTCGCCTTCTCCTT 59.737 61.111 0.00 0.00 0.00 3.36
269 270 4.443266 GCACGCTCGCCTTCTCCT 62.443 66.667 0.00 0.00 0.00 3.69
298 299 3.564027 GAGCCGGATTTGCGTCGG 61.564 66.667 5.05 0.00 45.84 4.79
299 300 1.906994 TTTGAGCCGGATTTGCGTCG 61.907 55.000 5.05 0.00 0.00 5.12
300 301 0.239879 TTTTGAGCCGGATTTGCGTC 59.760 50.000 5.05 0.00 0.00 5.19
301 302 0.671251 TTTTTGAGCCGGATTTGCGT 59.329 45.000 5.05 0.00 0.00 5.24
302 303 1.655099 CATTTTTGAGCCGGATTTGCG 59.345 47.619 5.05 0.00 0.00 4.85
303 304 2.958213 TCATTTTTGAGCCGGATTTGC 58.042 42.857 5.05 0.00 0.00 3.68
304 305 3.679502 GGTTCATTTTTGAGCCGGATTTG 59.320 43.478 5.05 0.00 29.86 2.32
305 306 3.925379 GGTTCATTTTTGAGCCGGATTT 58.075 40.909 5.05 0.00 29.86 2.17
306 307 3.592898 GGTTCATTTTTGAGCCGGATT 57.407 42.857 5.05 0.00 29.86 3.01
311 312 1.253100 TCCCGGTTCATTTTTGAGCC 58.747 50.000 0.00 0.00 36.08 4.70
312 313 2.417243 CCATCCCGGTTCATTTTTGAGC 60.417 50.000 0.00 0.00 0.00 4.26
313 314 2.166254 CCCATCCCGGTTCATTTTTGAG 59.834 50.000 0.00 0.00 0.00 3.02
314 315 2.175202 CCCATCCCGGTTCATTTTTGA 58.825 47.619 0.00 0.00 0.00 2.69
315 316 1.899142 ACCCATCCCGGTTCATTTTTG 59.101 47.619 0.00 0.00 29.19 2.44
316 317 2.301583 CAACCCATCCCGGTTCATTTTT 59.698 45.455 0.00 0.00 44.54 1.94
317 318 1.899142 CAACCCATCCCGGTTCATTTT 59.101 47.619 0.00 0.00 44.54 1.82
318 319 1.555967 CAACCCATCCCGGTTCATTT 58.444 50.000 0.00 0.00 44.54 2.32
319 320 0.970427 GCAACCCATCCCGGTTCATT 60.970 55.000 0.00 0.00 44.54 2.57
320 321 1.379843 GCAACCCATCCCGGTTCAT 60.380 57.895 0.00 0.00 44.54 2.57
321 322 2.034999 GCAACCCATCCCGGTTCA 59.965 61.111 0.00 0.00 44.54 3.18
322 323 2.754254 GGCAACCCATCCCGGTTC 60.754 66.667 0.00 0.00 44.54 3.62
334 335 3.588891 CTTTTCGTCCGCGGGCAAC 62.589 63.158 31.65 18.10 38.89 4.17
335 336 3.350612 CTTTTCGTCCGCGGGCAA 61.351 61.111 31.65 19.79 38.89 4.52
340 341 4.130281 GTCCGCTTTTCGTCCGCG 62.130 66.667 0.00 0.00 45.86 6.46
341 342 4.130281 CGTCCGCTTTTCGTCCGC 62.130 66.667 0.00 0.00 36.19 5.54
342 343 4.130281 GCGTCCGCTTTTCGTCCG 62.130 66.667 4.10 0.00 38.26 4.79
343 344 4.130281 CGCGTCCGCTTTTCGTCC 62.130 66.667 10.21 0.00 39.32 4.79
344 345 3.400590 ACGCGTCCGCTTTTCGTC 61.401 61.111 5.58 0.00 39.32 4.20
345 346 3.698463 CACGCGTCCGCTTTTCGT 61.698 61.111 9.86 0.00 39.32 3.85
346 347 3.609422 GACACGCGTCCGCTTTTCG 62.609 63.158 9.86 0.00 39.32 3.46
347 348 2.170273 GACACGCGTCCGCTTTTC 59.830 61.111 9.86 0.00 39.32 2.29
355 356 3.708734 CCCAAACGGACACGCGTC 61.709 66.667 9.86 0.00 46.04 5.19
356 357 4.534141 ACCCAAACGGACACGCGT 62.534 61.111 5.58 5.58 46.04 6.01
357 358 3.708734 GACCCAAACGGACACGCG 61.709 66.667 3.53 3.53 46.04 6.01
358 359 3.708734 CGACCCAAACGGACACGC 61.709 66.667 0.00 0.00 46.04 5.34
365 366 3.273834 AACGCACCGACCCAAACG 61.274 61.111 0.00 0.00 0.00 3.60
366 367 2.330041 CAACGCACCGACCCAAAC 59.670 61.111 0.00 0.00 0.00 2.93
367 368 2.902846 CCAACGCACCGACCCAAA 60.903 61.111 0.00 0.00 0.00 3.28
368 369 4.939368 CCCAACGCACCGACCCAA 62.939 66.667 0.00 0.00 0.00 4.12
376 377 3.723348 GAAGTCGGCCCAACGCAC 61.723 66.667 0.00 0.00 40.31 5.34
377 378 3.876589 GAGAAGTCGGCCCAACGCA 62.877 63.158 0.00 0.00 40.31 5.24
378 379 3.119096 GAGAAGTCGGCCCAACGC 61.119 66.667 0.00 0.00 0.00 4.84
379 380 1.738099 CAGAGAAGTCGGCCCAACG 60.738 63.158 0.00 0.00 0.00 4.10
380 381 0.670854 GACAGAGAAGTCGGCCCAAC 60.671 60.000 0.00 0.00 0.00 3.77
381 382 1.671742 GACAGAGAAGTCGGCCCAA 59.328 57.895 0.00 0.00 0.00 4.12
382 383 2.283529 GGACAGAGAAGTCGGCCCA 61.284 63.158 0.00 0.00 39.42 5.36
383 384 1.617947 ATGGACAGAGAAGTCGGCCC 61.618 60.000 0.00 0.00 39.42 5.80
384 385 0.460987 CATGGACAGAGAAGTCGGCC 60.461 60.000 0.00 0.00 39.42 6.13
385 386 1.086634 GCATGGACAGAGAAGTCGGC 61.087 60.000 0.00 0.00 39.42 5.54
386 387 0.460987 GGCATGGACAGAGAAGTCGG 60.461 60.000 0.00 0.00 39.42 4.79
387 388 0.803768 CGGCATGGACAGAGAAGTCG 60.804 60.000 0.00 0.00 39.42 4.18
388 389 0.532573 TCGGCATGGACAGAGAAGTC 59.467 55.000 0.00 0.00 37.80 3.01
389 390 0.247736 GTCGGCATGGACAGAGAAGT 59.752 55.000 0.00 0.00 36.91 3.01
390 391 0.460987 GGTCGGCATGGACAGAGAAG 60.461 60.000 0.00 0.00 38.70 2.85
391 392 1.596934 GGTCGGCATGGACAGAGAA 59.403 57.895 0.00 0.00 38.70 2.87
392 393 2.359169 GGGTCGGCATGGACAGAGA 61.359 63.158 0.00 0.00 38.70 3.10
393 394 2.184020 TTGGGTCGGCATGGACAGAG 62.184 60.000 0.00 0.00 38.70 3.35
394 395 1.773856 TTTGGGTCGGCATGGACAGA 61.774 55.000 0.00 0.00 38.70 3.41
395 396 1.303236 TTTGGGTCGGCATGGACAG 60.303 57.895 0.00 0.00 38.70 3.51
396 397 1.602323 GTTTGGGTCGGCATGGACA 60.602 57.895 0.00 0.00 38.70 4.02
397 398 2.686816 CGTTTGGGTCGGCATGGAC 61.687 63.158 0.00 0.00 36.18 4.02
398 399 2.359354 CGTTTGGGTCGGCATGGA 60.359 61.111 0.00 0.00 0.00 3.41
399 400 3.439540 CCGTTTGGGTCGGCATGG 61.440 66.667 0.00 0.00 41.48 3.66
400 401 2.359354 TCCGTTTGGGTCGGCATG 60.359 61.111 0.00 0.00 46.49 4.06
401 402 2.359478 GTCCGTTTGGGTCGGCAT 60.359 61.111 0.00 0.00 46.49 4.40
402 403 4.973055 CGTCCGTTTGGGTCGGCA 62.973 66.667 0.00 0.00 46.49 5.69
406 407 4.668118 TCGCCGTCCGTTTGGGTC 62.668 66.667 0.00 0.00 38.35 4.46
407 408 4.974989 GTCGCCGTCCGTTTGGGT 62.975 66.667 0.00 0.00 38.35 4.51
416 417 3.873883 ATCTCGTCCGTCGCCGTC 61.874 66.667 3.08 0.00 39.67 4.79
417 418 4.175489 CATCTCGTCCGTCGCCGT 62.175 66.667 3.08 0.00 39.67 5.68
418 419 4.907034 CCATCTCGTCCGTCGCCG 62.907 72.222 0.00 0.00 39.67 6.46
419 420 2.734756 GATCCATCTCGTCCGTCGCC 62.735 65.000 0.00 0.00 39.67 5.54
420 421 1.370657 GATCCATCTCGTCCGTCGC 60.371 63.158 0.00 0.00 39.67 5.19
421 422 1.082692 CGATCCATCTCGTCCGTCG 60.083 63.158 0.00 0.00 41.41 5.12
422 423 1.370657 GCGATCCATCTCGTCCGTC 60.371 63.158 0.00 0.00 40.73 4.79
423 424 2.722487 GCGATCCATCTCGTCCGT 59.278 61.111 0.00 0.00 40.73 4.69
424 425 2.049985 GGCGATCCATCTCGTCCG 60.050 66.667 0.00 0.00 40.73 4.79
425 426 1.287503 GAGGCGATCCATCTCGTCC 59.712 63.158 0.00 0.00 44.10 4.79
426 427 0.600557 ATGAGGCGATCCATCTCGTC 59.399 55.000 0.00 0.00 43.39 4.20
427 428 1.043816 AATGAGGCGATCCATCTCGT 58.956 50.000 0.00 0.00 40.73 4.18
428 429 1.426423 CAATGAGGCGATCCATCTCG 58.574 55.000 0.00 0.00 41.54 4.04
429 430 1.345741 TCCAATGAGGCGATCCATCTC 59.654 52.381 0.00 0.00 37.29 2.75
430 431 1.347050 CTCCAATGAGGCGATCCATCT 59.653 52.381 0.00 0.00 37.29 2.90
431 432 1.071385 ACTCCAATGAGGCGATCCATC 59.929 52.381 0.00 0.00 43.29 3.51
432 433 1.135094 ACTCCAATGAGGCGATCCAT 58.865 50.000 0.00 0.00 43.29 3.41
433 434 0.911769 AACTCCAATGAGGCGATCCA 59.088 50.000 0.00 0.00 43.29 3.41
434 435 1.303309 CAACTCCAATGAGGCGATCC 58.697 55.000 0.00 0.00 43.29 3.36
435 436 0.659957 GCAACTCCAATGAGGCGATC 59.340 55.000 0.00 0.00 43.29 3.69
436 437 0.254178 AGCAACTCCAATGAGGCGAT 59.746 50.000 0.00 0.00 43.29 4.58
437 438 0.391661 GAGCAACTCCAATGAGGCGA 60.392 55.000 0.00 0.00 43.29 5.54
438 439 0.392193 AGAGCAACTCCAATGAGGCG 60.392 55.000 0.00 0.00 43.29 5.52
439 440 1.831580 AAGAGCAACTCCAATGAGGC 58.168 50.000 0.00 0.00 43.29 4.70
440 441 5.636965 CGATATAAGAGCAACTCCAATGAGG 59.363 44.000 0.00 0.00 43.29 3.86
441 442 5.636965 CCGATATAAGAGCAACTCCAATGAG 59.363 44.000 0.00 0.00 44.62 2.90
442 443 5.070446 ACCGATATAAGAGCAACTCCAATGA 59.930 40.000 0.00 0.00 0.00 2.57
443 444 5.300752 ACCGATATAAGAGCAACTCCAATG 58.699 41.667 0.00 0.00 0.00 2.82
444 445 5.552870 ACCGATATAAGAGCAACTCCAAT 57.447 39.130 0.00 0.00 0.00 3.16
445 446 6.266786 TGATACCGATATAAGAGCAACTCCAA 59.733 38.462 0.00 0.00 0.00 3.53
446 447 5.773176 TGATACCGATATAAGAGCAACTCCA 59.227 40.000 0.00 0.00 0.00 3.86
447 448 6.094061 GTGATACCGATATAAGAGCAACTCC 58.906 44.000 0.00 0.00 0.00 3.85
448 449 6.071840 AGGTGATACCGATATAAGAGCAACTC 60.072 42.308 0.00 0.00 44.90 3.01
449 450 5.775701 AGGTGATACCGATATAAGAGCAACT 59.224 40.000 0.00 0.00 44.90 3.16
450 451 6.026947 AGGTGATACCGATATAAGAGCAAC 57.973 41.667 0.00 0.00 44.90 4.17
451 452 6.010850 AGAGGTGATACCGATATAAGAGCAA 58.989 40.000 0.00 0.00 44.90 3.91
452 453 5.571285 AGAGGTGATACCGATATAAGAGCA 58.429 41.667 0.00 0.00 44.90 4.26
453 454 7.811117 ATAGAGGTGATACCGATATAAGAGC 57.189 40.000 0.00 0.00 44.90 4.09
459 460 9.924650 GTTGTTTTATAGAGGTGATACCGATAT 57.075 33.333 0.00 0.00 44.90 1.63
460 461 8.916062 TGTTGTTTTATAGAGGTGATACCGATA 58.084 33.333 0.00 0.00 44.90 2.92
461 462 7.788026 TGTTGTTTTATAGAGGTGATACCGAT 58.212 34.615 0.00 0.00 44.90 4.18
462 463 7.172868 TGTTGTTTTATAGAGGTGATACCGA 57.827 36.000 0.00 0.00 44.90 4.69
463 464 7.837202 TTGTTGTTTTATAGAGGTGATACCG 57.163 36.000 0.00 0.00 44.90 4.02
464 465 9.227777 ACTTTGTTGTTTTATAGAGGTGATACC 57.772 33.333 0.00 0.00 38.99 2.73
467 468 9.449719 CCTACTTTGTTGTTTTATAGAGGTGAT 57.550 33.333 0.00 0.00 0.00 3.06
468 469 8.653191 TCCTACTTTGTTGTTTTATAGAGGTGA 58.347 33.333 0.00 0.00 0.00 4.02
469 470 8.718734 GTCCTACTTTGTTGTTTTATAGAGGTG 58.281 37.037 0.00 0.00 0.00 4.00
470 471 8.434392 TGTCCTACTTTGTTGTTTTATAGAGGT 58.566 33.333 0.00 0.00 0.00 3.85
471 472 8.842358 TGTCCTACTTTGTTGTTTTATAGAGG 57.158 34.615 0.00 0.00 0.00 3.69
472 473 8.443937 GCTGTCCTACTTTGTTGTTTTATAGAG 58.556 37.037 0.00 0.00 0.00 2.43
473 474 7.934665 TGCTGTCCTACTTTGTTGTTTTATAGA 59.065 33.333 0.00 0.00 0.00 1.98
474 475 8.094798 TGCTGTCCTACTTTGTTGTTTTATAG 57.905 34.615 0.00 0.00 0.00 1.31
475 476 8.347035 GTTGCTGTCCTACTTTGTTGTTTTATA 58.653 33.333 0.00 0.00 0.00 0.98
476 477 6.952773 TGCTGTCCTACTTTGTTGTTTTAT 57.047 33.333 0.00 0.00 0.00 1.40
477 478 6.376018 AGTTGCTGTCCTACTTTGTTGTTTTA 59.624 34.615 0.00 0.00 0.00 1.52
478 479 5.185056 AGTTGCTGTCCTACTTTGTTGTTTT 59.815 36.000 0.00 0.00 0.00 2.43
479 480 4.705023 AGTTGCTGTCCTACTTTGTTGTTT 59.295 37.500 0.00 0.00 0.00 2.83
480 481 4.270008 AGTTGCTGTCCTACTTTGTTGTT 58.730 39.130 0.00 0.00 0.00 2.83
481 482 3.886123 AGTTGCTGTCCTACTTTGTTGT 58.114 40.909 0.00 0.00 0.00 3.32
482 483 4.096382 ACAAGTTGCTGTCCTACTTTGTTG 59.904 41.667 1.81 0.00 37.40 3.33
483 484 4.096382 CACAAGTTGCTGTCCTACTTTGTT 59.904 41.667 1.81 0.00 37.40 2.83
484 485 3.627577 CACAAGTTGCTGTCCTACTTTGT 59.372 43.478 1.81 0.00 37.40 2.83
485 486 3.876914 TCACAAGTTGCTGTCCTACTTTG 59.123 43.478 1.81 0.00 37.40 2.77
486 487 4.150897 TCACAAGTTGCTGTCCTACTTT 57.849 40.909 1.81 0.00 37.40 2.66
487 488 3.838244 TCACAAGTTGCTGTCCTACTT 57.162 42.857 1.81 0.00 39.56 2.24
488 489 3.307059 GGATCACAAGTTGCTGTCCTACT 60.307 47.826 1.81 0.00 0.00 2.57
489 490 3.003480 GGATCACAAGTTGCTGTCCTAC 58.997 50.000 1.81 0.00 0.00 3.18
490 491 2.637382 TGGATCACAAGTTGCTGTCCTA 59.363 45.455 17.04 6.09 0.00 2.94
491 492 1.421268 TGGATCACAAGTTGCTGTCCT 59.579 47.619 17.04 2.26 0.00 3.85
492 493 1.896220 TGGATCACAAGTTGCTGTCC 58.104 50.000 1.81 8.26 0.00 4.02
493 494 3.988379 TTTGGATCACAAGTTGCTGTC 57.012 42.857 1.81 0.00 40.82 3.51
494 495 4.734398 TTTTTGGATCACAAGTTGCTGT 57.266 36.364 1.81 0.00 40.82 4.40
516 517 8.883731 CCATTAGTAGTGAAGAAACGATTTGAT 58.116 33.333 0.00 0.00 0.00 2.57
517 518 8.092068 TCCATTAGTAGTGAAGAAACGATTTGA 58.908 33.333 0.00 0.00 0.00 2.69
518 519 8.251750 TCCATTAGTAGTGAAGAAACGATTTG 57.748 34.615 0.00 0.00 0.00 2.32
519 520 8.883731 CATCCATTAGTAGTGAAGAAACGATTT 58.116 33.333 0.00 0.00 0.00 2.17
520 521 8.258007 TCATCCATTAGTAGTGAAGAAACGATT 58.742 33.333 0.00 0.00 0.00 3.34
521 522 7.782049 TCATCCATTAGTAGTGAAGAAACGAT 58.218 34.615 0.00 0.00 0.00 3.73
522 523 7.165460 TCATCCATTAGTAGTGAAGAAACGA 57.835 36.000 0.00 0.00 0.00 3.85
523 524 9.698309 ATATCATCCATTAGTAGTGAAGAAACG 57.302 33.333 0.00 0.00 0.00 3.60
529 530 9.480861 CCCTCTATATCATCCATTAGTAGTGAA 57.519 37.037 0.00 0.00 0.00 3.18
530 531 8.624670 ACCCTCTATATCATCCATTAGTAGTGA 58.375 37.037 0.00 0.00 0.00 3.41
531 532 8.830915 ACCCTCTATATCATCCATTAGTAGTG 57.169 38.462 0.00 0.00 0.00 2.74
548 549 9.862149 CCAAAGTTGGTATAAATTACCCTCTAT 57.138 33.333 1.63 0.00 43.43 1.98
580 581 2.623878 TCTGCCGGTCTGTACAAAAA 57.376 45.000 1.90 0.00 0.00 1.94
581 582 2.489971 CTTCTGCCGGTCTGTACAAAA 58.510 47.619 1.90 0.00 0.00 2.44
582 583 1.876416 GCTTCTGCCGGTCTGTACAAA 60.876 52.381 1.90 0.00 0.00 2.83
583 584 0.320421 GCTTCTGCCGGTCTGTACAA 60.320 55.000 1.90 0.00 0.00 2.41
584 585 1.292223 GCTTCTGCCGGTCTGTACA 59.708 57.895 1.90 0.00 0.00 2.90
585 586 1.805945 CGCTTCTGCCGGTCTGTAC 60.806 63.158 1.90 0.00 35.36 2.90
586 587 1.320344 ATCGCTTCTGCCGGTCTGTA 61.320 55.000 1.90 0.00 35.36 2.74
587 588 1.320344 TATCGCTTCTGCCGGTCTGT 61.320 55.000 1.90 0.00 35.36 3.41
588 589 0.596083 CTATCGCTTCTGCCGGTCTG 60.596 60.000 1.90 0.00 35.36 3.51
589 590 0.752009 TCTATCGCTTCTGCCGGTCT 60.752 55.000 1.90 0.00 35.36 3.85
590 591 0.595310 GTCTATCGCTTCTGCCGGTC 60.595 60.000 1.90 0.00 35.36 4.79
591 592 1.320344 TGTCTATCGCTTCTGCCGGT 61.320 55.000 1.90 0.00 35.36 5.28
592 593 0.872021 GTGTCTATCGCTTCTGCCGG 60.872 60.000 0.00 0.00 35.36 6.13
593 594 0.101399 AGTGTCTATCGCTTCTGCCG 59.899 55.000 0.00 0.00 32.41 5.69
594 595 2.301577 AAGTGTCTATCGCTTCTGCC 57.698 50.000 0.00 0.00 42.36 4.85
595 596 5.975410 AATAAAGTGTCTATCGCTTCTGC 57.025 39.130 0.00 0.00 44.80 4.26
597 598 9.915629 CCTAATAATAAAGTGTCTATCGCTTCT 57.084 33.333 0.00 0.00 44.80 2.85
598 599 9.694137 ACCTAATAATAAAGTGTCTATCGCTTC 57.306 33.333 0.00 0.00 44.80 3.86
639 640 9.387257 CACCTCATAATACATACATATGCACAT 57.613 33.333 1.58 0.00 37.19 3.21
640 641 7.823799 CCACCTCATAATACATACATATGCACA 59.176 37.037 1.58 0.00 37.19 4.57
641 642 7.280876 CCCACCTCATAATACATACATATGCAC 59.719 40.741 1.58 0.00 37.19 4.57
642 643 7.181845 TCCCACCTCATAATACATACATATGCA 59.818 37.037 1.58 0.00 37.19 3.96
643 644 7.564793 TCCCACCTCATAATACATACATATGC 58.435 38.462 1.58 0.00 37.19 3.14
644 645 9.958180 TTTCCCACCTCATAATACATACATATG 57.042 33.333 0.00 0.00 39.55 1.78
647 648 9.881773 ATTTTTCCCACCTCATAATACATACAT 57.118 29.630 0.00 0.00 0.00 2.29
652 653 9.928618 TTCATATTTTTCCCACCTCATAATACA 57.071 29.630 0.00 0.00 0.00 2.29
654 655 9.586732 CCTTCATATTTTTCCCACCTCATAATA 57.413 33.333 0.00 0.00 0.00 0.98
655 656 8.067488 ACCTTCATATTTTTCCCACCTCATAAT 58.933 33.333 0.00 0.00 0.00 1.28
656 657 7.341769 CACCTTCATATTTTTCCCACCTCATAA 59.658 37.037 0.00 0.00 0.00 1.90
657 658 6.833416 CACCTTCATATTTTTCCCACCTCATA 59.167 38.462 0.00 0.00 0.00 2.15
679 680 0.744771 GCCCCGAGAGAATTGTCACC 60.745 60.000 5.28 0.00 0.00 4.02
760 767 0.801067 GACCGTGCGTACATGAGTCC 60.801 60.000 4.09 0.00 34.49 3.85
761 768 1.132199 CGACCGTGCGTACATGAGTC 61.132 60.000 4.09 4.01 34.49 3.36
762 769 1.154093 CGACCGTGCGTACATGAGT 60.154 57.895 4.09 0.00 34.49 3.41
763 770 2.505498 GCGACCGTGCGTACATGAG 61.505 63.158 4.09 0.00 34.49 2.90
764 771 2.505337 GCGACCGTGCGTACATGA 60.505 61.111 4.09 0.00 34.49 3.07
765 772 2.807470 TGCGACCGTGCGTACATG 60.807 61.111 4.09 0.00 37.81 3.21
782 789 4.204028 GGTGCCCAGGTGTGTGGT 62.204 66.667 0.00 0.00 35.60 4.16
870 883 6.777580 ACATACAGGATTCAGAAAAGTTTGGT 59.222 34.615 0.00 0.00 0.00 3.67
882 895 7.255836 GCGGCCTATATATACATACAGGATTCA 60.256 40.741 0.00 0.00 0.00 2.57
933 959 3.054875 TGGAGCACGTACTCTACTCCTTA 60.055 47.826 15.25 0.00 45.86 2.69
986 1019 2.178890 GCCATCTTCGAGCAGCTGG 61.179 63.158 17.12 0.00 0.00 4.85
1095 1142 0.034756 TGACACTGGTGATCAACGGG 59.965 55.000 23.38 13.21 0.00 5.28
1160 1215 2.823593 CGCCGATGGATTGCACCA 60.824 61.111 0.00 0.00 44.41 4.17
1423 1487 1.731613 CGGCAGCGACGTACTTGAA 60.732 57.895 0.00 0.00 0.00 2.69
1594 5859 0.038892 ATGTACGCGTCCTTGAACGT 60.039 50.000 18.63 5.61 44.38 3.99
1659 5924 2.685850 AGTAAGGATACACGTTGGCC 57.314 50.000 0.00 0.00 41.41 5.36
1671 5936 3.386402 CACCCTTTTTGGCAAAGTAAGGA 59.614 43.478 31.24 9.74 38.05 3.36
1674 5939 3.133183 GGTCACCCTTTTTGGCAAAGTAA 59.867 43.478 13.04 4.90 0.00 2.24
1680 5945 4.286447 GGGTCACCCTTTTTGGCA 57.714 55.556 5.22 0.00 41.34 4.92
1797 6062 3.525537 CTTCTCCATCGCAGTGTACATT 58.474 45.455 0.00 0.00 0.00 2.71
1798 6063 2.159043 CCTTCTCCATCGCAGTGTACAT 60.159 50.000 0.00 0.00 0.00 2.29
1836 6101 2.036731 TCGGAGACCACGATGGGT 59.963 61.111 8.57 3.75 43.37 4.51
1895 6160 0.793104 GTTGTACGCCTGCGCATTTC 60.793 55.000 12.24 1.57 44.19 2.17
1920 6185 1.080093 GCCGACGTGGTTGATCAGA 60.080 57.895 0.00 0.00 41.21 3.27
2136 6762 2.595124 TGCGGCTTATTGAGATCGAA 57.405 45.000 0.00 0.00 0.00 3.71
2152 6787 6.155691 AGTGTTTGCATGAATTATTTTGCG 57.844 33.333 0.00 0.00 37.92 4.85
2210 6845 5.241506 ACGATCCTTTATGCAACATAATGGG 59.758 40.000 22.26 16.56 32.67 4.00
2229 6864 1.205417 TGTACGGAAGGGGAAACGATC 59.795 52.381 0.00 0.00 0.00 3.69
2255 6890 4.378046 CGCTGTACATCCCAAGTTAACAAC 60.378 45.833 8.61 0.00 0.00 3.32
2271 6906 3.515071 ACGTGAAATCAAACGCTGTAC 57.485 42.857 0.00 0.00 43.49 2.90
2275 6910 3.684103 TTGAACGTGAAATCAAACGCT 57.316 38.095 0.00 0.00 43.49 5.07
2277 6912 6.833880 GTCAAATTTGAACGTGAAATCAAACG 59.166 34.615 22.07 7.36 45.34 3.60
2286 6921 6.314018 GCATATCAGTCAAATTTGAACGTGA 58.686 36.000 22.07 22.06 39.21 4.35
2287 6922 5.512788 GGCATATCAGTCAAATTTGAACGTG 59.487 40.000 22.07 18.18 39.21 4.49
2289 6924 5.512788 GTGGCATATCAGTCAAATTTGAACG 59.487 40.000 22.07 15.53 39.21 3.95
2292 6927 5.945191 TCAGTGGCATATCAGTCAAATTTGA 59.055 36.000 16.91 16.91 34.20 2.69
2306 6941 5.336610 CCATCAACACAATTTCAGTGGCATA 60.337 40.000 0.00 0.00 41.21 3.14
2322 6957 9.913310 TGGTATGATTTAACTATTCCATCAACA 57.087 29.630 0.00 0.00 0.00 3.33
2336 6971 6.549433 AAGGTAGGACGTGGTATGATTTAA 57.451 37.500 0.00 0.00 0.00 1.52
2364 6999 4.095483 AGGTAGGACGTGTTATGTCGTAAG 59.905 45.833 0.00 0.00 36.58 2.34
2365 7000 4.009675 AGGTAGGACGTGTTATGTCGTAA 58.990 43.478 0.00 0.00 36.58 3.18
2366 7001 3.609853 AGGTAGGACGTGTTATGTCGTA 58.390 45.455 0.00 0.00 40.39 3.43
2367 7002 2.440409 AGGTAGGACGTGTTATGTCGT 58.560 47.619 0.00 0.00 43.00 4.34
2368 7003 3.624861 ACTAGGTAGGACGTGTTATGTCG 59.375 47.826 0.00 0.00 35.01 4.35
2369 7004 5.573337 AACTAGGTAGGACGTGTTATGTC 57.427 43.478 0.00 0.00 33.46 3.06
2370 7005 5.990120 AAACTAGGTAGGACGTGTTATGT 57.010 39.130 0.00 0.00 0.00 2.29
2371 7006 7.274250 GTGTAAAACTAGGTAGGACGTGTTATG 59.726 40.741 0.00 0.00 0.00 1.90
2372 7007 7.315890 GTGTAAAACTAGGTAGGACGTGTTAT 58.684 38.462 0.00 0.00 0.00 1.89
2373 7008 6.567701 CGTGTAAAACTAGGTAGGACGTGTTA 60.568 42.308 0.00 0.00 0.00 2.41
2374 7009 5.532557 GTGTAAAACTAGGTAGGACGTGTT 58.467 41.667 0.00 0.00 0.00 3.32
2375 7010 4.320494 CGTGTAAAACTAGGTAGGACGTGT 60.320 45.833 0.00 0.00 0.00 4.49
2400 7035 3.342377 TTGACTTGTGTTGACCAGACA 57.658 42.857 0.00 0.00 0.00 3.41
2402 7037 3.438781 GTGTTTGACTTGTGTTGACCAGA 59.561 43.478 0.00 0.00 0.00 3.86
2404 7039 2.160615 CGTGTTTGACTTGTGTTGACCA 59.839 45.455 0.00 0.00 0.00 4.02
2411 7054 3.064682 TCATTGGTCGTGTTTGACTTGTG 59.935 43.478 0.00 0.00 38.91 3.33
2423 7066 3.283751 TGTTTGGACTTTCATTGGTCGT 58.716 40.909 0.00 0.00 33.70 4.34
2424 7067 3.980646 TGTTTGGACTTTCATTGGTCG 57.019 42.857 0.00 0.00 33.70 4.79
2427 7070 3.392882 GGCTTGTTTGGACTTTCATTGG 58.607 45.455 0.00 0.00 0.00 3.16
2428 7071 3.181467 TGGGCTTGTTTGGACTTTCATTG 60.181 43.478 0.00 0.00 0.00 2.82
2429 7072 3.037549 TGGGCTTGTTTGGACTTTCATT 58.962 40.909 0.00 0.00 0.00 2.57
2460 7103 3.735237 TGGACTTGTCTCTGTGACTTC 57.265 47.619 10.76 5.23 45.54 3.01
2471 7114 5.749109 CCAAGACGTTCTATATGGACTTGTC 59.251 44.000 12.90 9.84 33.50 3.18
2472 7115 5.187186 ACCAAGACGTTCTATATGGACTTGT 59.813 40.000 12.90 2.82 33.50 3.16
2478 7122 4.288531 GTCGACCAAGACGTTCTATATGG 58.711 47.826 3.51 0.00 30.24 2.74
2494 7138 7.375544 GTGAAGAATAACTATTACTCGTCGACC 59.624 40.741 10.58 0.00 0.00 4.79
2496 7140 7.412853 GGTGAAGAATAACTATTACTCGTCGA 58.587 38.462 0.00 0.00 0.00 4.20
2497 7141 6.636044 GGGTGAAGAATAACTATTACTCGTCG 59.364 42.308 0.00 0.00 0.00 5.12
2498 7142 6.922407 GGGGTGAAGAATAACTATTACTCGTC 59.078 42.308 0.00 0.00 0.00 4.20
2500 7144 7.052142 AGGGGTGAAGAATAACTATTACTCG 57.948 40.000 0.00 0.00 0.00 4.18
2512 7156 9.320295 TGATGTTAAAATAAAGGGGTGAAGAAT 57.680 29.630 0.00 0.00 0.00 2.40
2513 7157 8.713708 TGATGTTAAAATAAAGGGGTGAAGAA 57.286 30.769 0.00 0.00 0.00 2.52
2514 7158 8.581578 GTTGATGTTAAAATAAAGGGGTGAAGA 58.418 33.333 0.00 0.00 0.00 2.87
2515 7159 8.364142 TGTTGATGTTAAAATAAAGGGGTGAAG 58.636 33.333 0.00 0.00 0.00 3.02
2516 7160 8.145122 GTGTTGATGTTAAAATAAAGGGGTGAA 58.855 33.333 0.00 0.00 0.00 3.18
2517 7161 7.287927 TGTGTTGATGTTAAAATAAAGGGGTGA 59.712 33.333 0.00 0.00 0.00 4.02
2518 7162 7.437748 TGTGTTGATGTTAAAATAAAGGGGTG 58.562 34.615 0.00 0.00 0.00 4.61
2519 7163 7.604657 TGTGTTGATGTTAAAATAAAGGGGT 57.395 32.000 0.00 0.00 0.00 4.95
2520 7164 7.487829 CGATGTGTTGATGTTAAAATAAAGGGG 59.512 37.037 0.00 0.00 0.00 4.79
2521 7165 8.026607 ACGATGTGTTGATGTTAAAATAAAGGG 58.973 33.333 0.00 0.00 0.00 3.95
2522 7166 8.964420 ACGATGTGTTGATGTTAAAATAAAGG 57.036 30.769 0.00 0.00 0.00 3.11
2558 7202 9.171701 CGTTTAAAATAAGACAAAATTGACGGA 57.828 29.630 0.00 0.00 0.00 4.69
2559 7203 8.960075 ACGTTTAAAATAAGACAAAATTGACGG 58.040 29.630 0.00 0.00 0.00 4.79
2675 7319 8.945057 GGACCATAAAAATTGCATTTTGTGTAT 58.055 29.630 16.31 8.03 41.30 2.29
2676 7320 7.116948 CGGACCATAAAAATTGCATTTTGTGTA 59.883 33.333 16.31 7.66 41.30 2.90
2677 7321 6.073331 CGGACCATAAAAATTGCATTTTGTGT 60.073 34.615 16.31 5.05 41.30 3.72
2678 7322 6.146837 TCGGACCATAAAAATTGCATTTTGTG 59.853 34.615 12.69 12.69 41.30 3.33
2679 7323 6.226787 TCGGACCATAAAAATTGCATTTTGT 58.773 32.000 7.31 4.82 41.30 2.83
2680 7324 6.718454 TCGGACCATAAAAATTGCATTTTG 57.282 33.333 7.31 0.00 41.30 2.44
2681 7325 7.064490 GTCATCGGACCATAAAAATTGCATTTT 59.936 33.333 0.75 0.75 39.81 1.82
2682 7326 6.534793 GTCATCGGACCATAAAAATTGCATTT 59.465 34.615 0.00 0.00 38.12 2.32
2683 7327 6.042143 GTCATCGGACCATAAAAATTGCATT 58.958 36.000 0.00 0.00 38.12 3.56
2684 7328 5.591099 GTCATCGGACCATAAAAATTGCAT 58.409 37.500 0.00 0.00 38.12 3.96
2685 7329 4.992688 GTCATCGGACCATAAAAATTGCA 58.007 39.130 0.00 0.00 38.12 4.08
2698 7342 3.689649 AGCAAAAATGTAGGTCATCGGAC 59.310 43.478 0.00 0.00 43.55 4.79
2699 7343 3.950397 AGCAAAAATGTAGGTCATCGGA 58.050 40.909 0.00 0.00 35.48 4.55
2700 7344 4.701956 AAGCAAAAATGTAGGTCATCGG 57.298 40.909 0.00 0.00 35.48 4.18
2701 7345 5.698832 TGAAAGCAAAAATGTAGGTCATCG 58.301 37.500 0.00 0.00 35.48 3.84
2702 7346 8.243426 TGTATGAAAGCAAAAATGTAGGTCATC 58.757 33.333 0.00 0.00 35.48 2.92
2703 7347 8.028938 GTGTATGAAAGCAAAAATGTAGGTCAT 58.971 33.333 0.00 0.00 38.57 3.06
2704 7348 7.013750 TGTGTATGAAAGCAAAAATGTAGGTCA 59.986 33.333 0.00 0.00 0.00 4.02
2705 7349 7.326063 GTGTGTATGAAAGCAAAAATGTAGGTC 59.674 37.037 0.00 0.00 0.00 3.85
2706 7350 7.145323 GTGTGTATGAAAGCAAAAATGTAGGT 58.855 34.615 0.00 0.00 0.00 3.08
2707 7351 7.114811 GTGTGTGTATGAAAGCAAAAATGTAGG 59.885 37.037 0.00 0.00 0.00 3.18
2708 7352 7.647318 TGTGTGTGTATGAAAGCAAAAATGTAG 59.353 33.333 0.00 0.00 0.00 2.74
2709 7353 7.433719 GTGTGTGTGTATGAAAGCAAAAATGTA 59.566 33.333 0.00 0.00 0.00 2.29
2710 7354 6.255453 GTGTGTGTGTATGAAAGCAAAAATGT 59.745 34.615 0.00 0.00 0.00 2.71
2711 7355 6.255237 TGTGTGTGTGTATGAAAGCAAAAATG 59.745 34.615 0.00 0.00 0.00 2.32
2712 7356 6.255453 GTGTGTGTGTGTATGAAAGCAAAAAT 59.745 34.615 0.00 0.00 0.00 1.82
2713 7357 5.574830 GTGTGTGTGTGTATGAAAGCAAAAA 59.425 36.000 0.00 0.00 0.00 1.94
2714 7358 5.098893 GTGTGTGTGTGTATGAAAGCAAAA 58.901 37.500 0.00 0.00 0.00 2.44
2715 7359 4.156739 TGTGTGTGTGTGTATGAAAGCAAA 59.843 37.500 0.00 0.00 0.00 3.68
2716 7360 3.691609 TGTGTGTGTGTGTATGAAAGCAA 59.308 39.130 0.00 0.00 0.00 3.91
2717 7361 3.064682 GTGTGTGTGTGTGTATGAAAGCA 59.935 43.478 0.00 0.00 0.00 3.91
2718 7362 3.064682 TGTGTGTGTGTGTGTATGAAAGC 59.935 43.478 0.00 0.00 0.00 3.51
2719 7363 4.873768 TGTGTGTGTGTGTGTATGAAAG 57.126 40.909 0.00 0.00 0.00 2.62
2720 7364 5.826601 ATTGTGTGTGTGTGTGTATGAAA 57.173 34.783 0.00 0.00 0.00 2.69
2721 7365 6.052360 ACTATTGTGTGTGTGTGTGTATGAA 58.948 36.000 0.00 0.00 0.00 2.57
2722 7366 5.606505 ACTATTGTGTGTGTGTGTGTATGA 58.393 37.500 0.00 0.00 0.00 2.15
2723 7367 5.922739 ACTATTGTGTGTGTGTGTGTATG 57.077 39.130 0.00 0.00 0.00 2.39
2724 7368 8.615878 ATTTACTATTGTGTGTGTGTGTGTAT 57.384 30.769 0.00 0.00 0.00 2.29
2725 7369 8.980610 GTATTTACTATTGTGTGTGTGTGTGTA 58.019 33.333 0.00 0.00 0.00 2.90
2726 7370 6.935741 ATTTACTATTGTGTGTGTGTGTGT 57.064 33.333 0.00 0.00 0.00 3.72
2727 7371 8.083462 AGTATTTACTATTGTGTGTGTGTGTG 57.917 34.615 0.00 0.00 34.13 3.82
2728 7372 9.419297 CTAGTATTTACTATTGTGTGTGTGTGT 57.581 33.333 0.00 0.00 38.06 3.72
2729 7373 9.419297 ACTAGTATTTACTATTGTGTGTGTGTG 57.581 33.333 0.00 0.00 38.06 3.82
2749 7393 8.554835 TGCAAAGCACATACAAATTACTAGTA 57.445 30.769 0.00 0.00 31.71 1.82
2853 7497 2.224769 ACAATCCACGAGTTCCCAACAT 60.225 45.455 0.00 0.00 0.00 2.71
2859 7503 3.982576 AAACAACAATCCACGAGTTCC 57.017 42.857 0.00 0.00 0.00 3.62
2876 7520 6.959311 AGCGTGATTTGATACGAATTGTAAAC 59.041 34.615 0.00 0.00 42.54 2.01
2877 7521 7.067532 AGCGTGATTTGATACGAATTGTAAA 57.932 32.000 0.00 0.00 42.54 2.01
2886 7530 2.857748 TGTGCTAGCGTGATTTGATACG 59.142 45.455 10.77 0.00 42.79 3.06
2891 7535 3.745332 TCATTGTGCTAGCGTGATTTG 57.255 42.857 10.77 3.24 0.00 2.32
2902 7546 9.624373 ACTCTTCATATAGAAATTCATTGTGCT 57.376 29.630 0.00 0.00 35.40 4.40
2951 7598 6.311200 GCGTCAATAGCATTTCTTTTTGGAAT 59.689 34.615 0.00 0.00 34.19 3.01
2952 7599 5.633182 GCGTCAATAGCATTTCTTTTTGGAA 59.367 36.000 0.00 0.00 34.19 3.53
2954 7601 4.030529 CGCGTCAATAGCATTTCTTTTTGG 59.969 41.667 0.00 0.00 34.19 3.28
2956 7603 4.794169 ACGCGTCAATAGCATTTCTTTTT 58.206 34.783 5.58 0.00 34.19 1.94
2967 7614 4.957971 AGATTTCACAAACGCGTCAATAG 58.042 39.130 14.44 3.32 0.00 1.73
2974 7621 6.911484 AAAATAGAAGATTTCACAAACGCG 57.089 33.333 3.53 3.53 0.00 6.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.