Multiple sequence alignment - TraesCS3A01G481600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G481600 chr3A 100.000 2440 0 0 1 2440 712551564 712554003 0.000000e+00 4506.0
1 TraesCS3A01G481600 chr3A 91.626 1027 76 4 1416 2440 711260693 711259675 0.000000e+00 1411.0
2 TraesCS3A01G481600 chr3A 88.699 938 95 7 1414 2347 712545470 712546400 0.000000e+00 1134.0
3 TraesCS3A01G481600 chr3A 100.000 589 0 0 2761 3349 712554324 712554912 0.000000e+00 1088.0
4 TraesCS3A01G481600 chr3A 96.875 160 5 0 1 160 209638775 209638934 5.510000e-68 268.0
5 TraesCS3A01G481600 chr3B 88.325 2030 137 56 432 2401 768742090 768740101 0.000000e+00 2344.0
6 TraesCS3A01G481600 chr3B 90.971 1030 75 10 1416 2440 766643158 766642142 0.000000e+00 1371.0
7 TraesCS3A01G481600 chr3B 87.831 945 104 7 1414 2354 768746701 768745764 0.000000e+00 1098.0
8 TraesCS3A01G481600 chr3B 85.467 1039 119 18 1414 2440 766661507 766660489 0.000000e+00 1053.0
9 TraesCS3A01G481600 chr3B 83.333 216 21 7 791 997 766643684 766643475 5.710000e-43 185.0
10 TraesCS3A01G481600 chr3B 88.462 78 7 2 1042 1118 768746932 768746856 3.560000e-15 93.5
11 TraesCS3A01G481600 chr3D 91.225 1265 81 14 1193 2440 577249909 577251160 0.000000e+00 1694.0
12 TraesCS3A01G481600 chr3D 91.821 1027 74 4 1416 2440 575737860 575736842 0.000000e+00 1423.0
13 TraesCS3A01G481600 chr3D 86.738 1033 119 14 1414 2437 577239458 577240481 0.000000e+00 1133.0
14 TraesCS3A01G481600 chr3D 86.492 1066 97 29 148 1195 577248706 577249742 0.000000e+00 1127.0
15 TraesCS3A01G481600 chr3D 76.809 539 64 38 791 1309 575738452 575737955 2.580000e-61 246.0
16 TraesCS3A01G481600 chr1A 96.178 157 6 0 1 157 592078242 592078398 1.190000e-64 257.0
17 TraesCS3A01G481600 chr1A 88.462 78 9 0 3272 3349 95530843 95530920 9.890000e-16 95.3
18 TraesCS3A01G481600 chr7B 81.119 286 50 4 148 431 116283703 116283986 3.360000e-55 226.0
19 TraesCS3A01G481600 chr6A 81.852 270 44 5 165 431 343662616 343662349 4.350000e-54 222.0
20 TraesCS3A01G481600 chr7A 94.366 142 8 0 3208 3349 560945688 560945829 5.630000e-53 219.0
21 TraesCS3A01G481600 chr7A 89.820 167 15 2 1 166 713412771 713412606 2.620000e-51 213.0
22 TraesCS3A01G481600 chr7A 89.697 165 16 1 1 165 713341490 713341327 3.390000e-50 209.0
23 TraesCS3A01G481600 chr7A 89.091 165 17 1 1 165 713535305 713535142 1.580000e-48 204.0
24 TraesCS3A01G481600 chr7A 88.485 165 18 1 1 165 713477387 713477224 7.330000e-47 198.0
25 TraesCS3A01G481600 chr7A 87.879 165 18 2 1 165 713562915 713562753 3.410000e-45 193.0
26 TraesCS3A01G481600 chr4D 82.520 246 39 3 170 413 399304254 399304497 2.620000e-51 213.0
27 TraesCS3A01G481600 chr4D 92.647 136 10 0 3214 3349 509368610 509368475 2.640000e-46 196.0
28 TraesCS3A01G481600 chr4A 92.053 151 11 1 3199 3349 101515653 101515504 9.410000e-51 211.0
29 TraesCS3A01G481600 chr2A 90.845 142 13 0 3208 3349 264245821 264245680 1.230000e-44 191.0
30 TraesCS3A01G481600 chr6B 88.742 151 17 0 8 158 614586639 614586489 5.710000e-43 185.0
31 TraesCS3A01G481600 chrUn 89.437 142 15 0 3208 3349 331267892 331268033 2.650000e-41 180.0
32 TraesCS3A01G481600 chrUn 88.732 142 16 0 3208 3349 47286817 47286958 1.240000e-39 174.0
33 TraesCS3A01G481600 chrUn 89.209 139 15 0 3211 3349 47317200 47317062 1.240000e-39 174.0
34 TraesCS3A01G481600 chr4B 89.437 142 15 0 3208 3349 7521483 7521342 2.650000e-41 180.0
35 TraesCS3A01G481600 chr4B 86.093 151 21 0 8 158 109632443 109632593 2.670000e-36 163.0
36 TraesCS3A01G481600 chr5A 85.507 69 5 4 3203 3270 634135403 634135467 2.160000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G481600 chr3A 712551564 712554912 3348 False 2797.0 4506 100.0000 1 3349 2 chr3A.!!$F3 3348
1 TraesCS3A01G481600 chr3A 711259675 711260693 1018 True 1411.0 1411 91.6260 1416 2440 1 chr3A.!!$R1 1024
2 TraesCS3A01G481600 chr3A 712545470 712546400 930 False 1134.0 1134 88.6990 1414 2347 1 chr3A.!!$F2 933
3 TraesCS3A01G481600 chr3B 768740101 768746932 6831 True 1178.5 2344 88.2060 432 2401 3 chr3B.!!$R3 1969
4 TraesCS3A01G481600 chr3B 766660489 766661507 1018 True 1053.0 1053 85.4670 1414 2440 1 chr3B.!!$R1 1026
5 TraesCS3A01G481600 chr3B 766642142 766643684 1542 True 778.0 1371 87.1520 791 2440 2 chr3B.!!$R2 1649
6 TraesCS3A01G481600 chr3D 577248706 577251160 2454 False 1410.5 1694 88.8585 148 2440 2 chr3D.!!$F2 2292
7 TraesCS3A01G481600 chr3D 577239458 577240481 1023 False 1133.0 1133 86.7380 1414 2437 1 chr3D.!!$F1 1023
8 TraesCS3A01G481600 chr3D 575736842 575738452 1610 True 834.5 1423 84.3150 791 2440 2 chr3D.!!$R1 1649

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
926 5350 0.240945 GTGTATTGCGCCAAACTGCT 59.759 50.0 4.18 0.0 0.0 4.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2864 7592 0.250597 AAAGTACCGTCCAGTTGGCC 60.251 55.0 0.0 0.0 34.44 5.36 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 8.837099 ACCAAATATGTTATGAATTTCCAGGA 57.163 30.769 0.00 0.00 0.00 3.86
48 49 9.956720 CAAATATGTTATGAATTTCCAGGACTC 57.043 33.333 0.00 0.00 0.00 3.36
49 50 9.927081 AAATATGTTATGAATTTCCAGGACTCT 57.073 29.630 0.00 0.00 0.00 3.24
50 51 8.915057 ATATGTTATGAATTTCCAGGACTCTG 57.085 34.615 0.00 0.00 40.59 3.35
51 52 6.373005 TGTTATGAATTTCCAGGACTCTGA 57.627 37.500 0.00 0.00 43.49 3.27
52 53 6.962182 TGTTATGAATTTCCAGGACTCTGAT 58.038 36.000 0.00 0.00 43.49 2.90
53 54 6.825213 TGTTATGAATTTCCAGGACTCTGATG 59.175 38.462 0.00 0.00 43.49 3.07
54 55 4.916041 TGAATTTCCAGGACTCTGATGT 57.084 40.909 0.00 0.00 43.49 3.06
55 56 6.566079 ATGAATTTCCAGGACTCTGATGTA 57.434 37.500 0.00 0.00 43.49 2.29
56 57 5.734720 TGAATTTCCAGGACTCTGATGTAC 58.265 41.667 0.00 0.00 43.49 2.90
57 58 5.248248 TGAATTTCCAGGACTCTGATGTACA 59.752 40.000 0.00 0.00 43.49 2.90
59 60 3.458044 TCCAGGACTCTGATGTACAGT 57.542 47.619 0.33 0.00 45.86 3.55
60 61 3.357203 TCCAGGACTCTGATGTACAGTC 58.643 50.000 0.33 2.61 45.86 3.51
61 62 3.092301 CCAGGACTCTGATGTACAGTCA 58.908 50.000 12.60 9.97 45.86 3.41
62 63 3.703556 CCAGGACTCTGATGTACAGTCAT 59.296 47.826 12.60 4.46 45.86 3.06
63 64 4.161189 CCAGGACTCTGATGTACAGTCATT 59.839 45.833 12.60 0.46 45.86 2.57
64 65 5.107824 CAGGACTCTGATGTACAGTCATTG 58.892 45.833 12.60 7.61 45.86 2.82
66 67 5.105554 AGGACTCTGATGTACAGTCATTGTC 60.106 44.000 12.60 16.35 45.86 3.18
67 68 5.336770 GGACTCTGATGTACAGTCATTGTCA 60.337 44.000 22.74 13.40 45.86 3.58
68 69 6.291648 ACTCTGATGTACAGTCATTGTCAT 57.708 37.500 0.33 0.00 45.86 3.06
70 71 8.016301 ACTCTGATGTACAGTCATTGTCATAT 57.984 34.615 0.33 0.00 45.86 1.78
71 72 7.924947 ACTCTGATGTACAGTCATTGTCATATG 59.075 37.037 0.33 0.00 45.86 1.78
73 74 8.477256 TCTGATGTACAGTCATTGTCATATGAA 58.523 33.333 7.07 0.00 45.86 2.57
74 75 9.101655 CTGATGTACAGTCATTGTCATATGAAA 57.898 33.333 7.07 0.00 41.29 2.69
75 76 8.882736 TGATGTACAGTCATTGTCATATGAAAC 58.117 33.333 7.07 0.00 41.29 2.78
76 77 9.102757 GATGTACAGTCATTGTCATATGAAACT 57.897 33.333 7.07 3.88 41.29 2.66
77 78 8.255394 TGTACAGTCATTGTCATATGAAACTG 57.745 34.615 20.53 20.53 41.29 3.16
78 79 6.748333 ACAGTCATTGTCATATGAAACTGG 57.252 37.500 23.23 10.23 35.92 4.00
80 81 6.372659 ACAGTCATTGTCATATGAAACTGGAC 59.627 38.462 23.23 18.88 35.92 4.02
81 82 5.882557 AGTCATTGTCATATGAAACTGGACC 59.117 40.000 7.07 0.00 36.37 4.46
83 84 6.375455 GTCATTGTCATATGAAACTGGACCTT 59.625 38.462 7.07 0.00 36.37 3.50
84 85 7.552687 GTCATTGTCATATGAAACTGGACCTTA 59.447 37.037 7.07 0.00 36.37 2.69
85 86 8.106462 TCATTGTCATATGAAACTGGACCTTAA 58.894 33.333 7.07 0.00 31.82 1.85
86 87 8.906867 CATTGTCATATGAAACTGGACCTTAAT 58.093 33.333 7.07 0.00 0.00 1.40
95 96 9.753674 ATGAAACTGGACCTTAATATTCTTCAA 57.246 29.630 0.00 0.00 0.00 2.69
96 97 9.010029 TGAAACTGGACCTTAATATTCTTCAAC 57.990 33.333 0.00 0.00 0.00 3.18
97 98 7.939784 AACTGGACCTTAATATTCTTCAACC 57.060 36.000 0.00 0.00 0.00 3.77
98 99 7.027874 ACTGGACCTTAATATTCTTCAACCA 57.972 36.000 0.00 0.00 0.00 3.67
99 100 7.643123 ACTGGACCTTAATATTCTTCAACCAT 58.357 34.615 0.00 0.00 0.00 3.55
100 101 7.775561 ACTGGACCTTAATATTCTTCAACCATC 59.224 37.037 0.00 0.00 0.00 3.51
101 102 7.638444 TGGACCTTAATATTCTTCAACCATCA 58.362 34.615 0.00 0.00 0.00 3.07
102 103 8.281531 TGGACCTTAATATTCTTCAACCATCAT 58.718 33.333 0.00 0.00 0.00 2.45
103 104 9.793259 GGACCTTAATATTCTTCAACCATCATA 57.207 33.333 0.00 0.00 0.00 2.15
112 113 7.757941 TTCTTCAACCATCATATGTCAAACA 57.242 32.000 1.90 0.00 0.00 2.83
113 114 7.757941 TCTTCAACCATCATATGTCAAACAA 57.242 32.000 1.90 0.00 0.00 2.83
114 115 7.819644 TCTTCAACCATCATATGTCAAACAAG 58.180 34.615 1.90 0.00 0.00 3.16
115 116 7.448161 TCTTCAACCATCATATGTCAAACAAGT 59.552 33.333 1.90 0.00 0.00 3.16
116 117 7.144722 TCAACCATCATATGTCAAACAAGTC 57.855 36.000 1.90 0.00 0.00 3.01
120 121 6.037500 ACCATCATATGTCAAACAAGTCATCG 59.962 38.462 1.90 0.00 0.00 3.84
121 122 6.424683 CATCATATGTCAAACAAGTCATCGG 58.575 40.000 1.90 0.00 0.00 4.18
122 123 5.729510 TCATATGTCAAACAAGTCATCGGA 58.270 37.500 1.90 0.00 0.00 4.55
123 124 6.169800 TCATATGTCAAACAAGTCATCGGAA 58.830 36.000 1.90 0.00 0.00 4.30
127 128 5.757886 TGTCAAACAAGTCATCGGAAAATC 58.242 37.500 0.00 0.00 0.00 2.17
128 129 5.154222 GTCAAACAAGTCATCGGAAAATCC 58.846 41.667 0.00 0.00 0.00 3.01
129 130 4.217550 TCAAACAAGTCATCGGAAAATCCC 59.782 41.667 0.00 0.00 31.13 3.85
136 137 3.273048 CGGAAAATCCCGCAGCAA 58.727 55.556 0.00 0.00 43.25 3.91
137 138 1.154035 CGGAAAATCCCGCAGCAAC 60.154 57.895 0.00 0.00 43.25 4.17
139 140 1.801512 GAAAATCCCGCAGCAACGC 60.802 57.895 0.00 0.00 0.00 4.84
155 156 3.272334 GCGCGGGGCATTGTCTAG 61.272 66.667 8.83 0.00 42.87 2.43
163 164 4.733523 GCGGGGCATTGTCTAGTTTTTATG 60.734 45.833 0.00 0.00 0.00 1.90
164 165 4.202010 CGGGGCATTGTCTAGTTTTTATGG 60.202 45.833 0.00 0.00 0.00 2.74
168 169 5.102313 GCATTGTCTAGTTTTTATGGTGGC 58.898 41.667 0.00 0.00 0.00 5.01
197 198 6.552445 ACTCATCTACCTGTTATTGAGCTT 57.448 37.500 0.00 0.00 35.20 3.74
202 203 9.588096 TCATCTACCTGTTATTGAGCTTAGATA 57.412 33.333 0.00 0.00 0.00 1.98
236 237 8.975410 TTTTCTTCAAATGTGCTATCAATGAG 57.025 30.769 0.00 0.00 0.00 2.90
238 239 7.080353 TCTTCAAATGTGCTATCAATGAGTG 57.920 36.000 0.00 0.00 0.00 3.51
241 242 5.183522 TCAAATGTGCTATCAATGAGTGCAA 59.816 36.000 12.97 6.21 35.34 4.08
242 243 5.648178 AATGTGCTATCAATGAGTGCAAA 57.352 34.783 12.97 9.39 35.34 3.68
243 244 5.648178 ATGTGCTATCAATGAGTGCAAAA 57.352 34.783 12.97 6.85 35.34 2.44
244 245 5.648178 TGTGCTATCAATGAGTGCAAAAT 57.352 34.783 12.97 0.00 35.34 1.82
245 246 6.028146 TGTGCTATCAATGAGTGCAAAATT 57.972 33.333 12.97 0.00 35.34 1.82
246 247 7.155655 TGTGCTATCAATGAGTGCAAAATTA 57.844 32.000 12.97 0.00 35.34 1.40
248 249 7.703197 TGTGCTATCAATGAGTGCAAAATTATG 59.297 33.333 12.97 0.00 35.34 1.90
249 250 7.916977 GTGCTATCAATGAGTGCAAAATTATGA 59.083 33.333 12.97 0.00 35.34 2.15
250 251 8.468399 TGCTATCAATGAGTGCAAAATTATGAA 58.532 29.630 9.79 0.00 0.00 2.57
255 256 8.143193 TCAATGAGTGCAAAATTATGAACAACT 58.857 29.630 0.00 0.00 30.65 3.16
256 257 8.767085 CAATGAGTGCAAAATTATGAACAACTT 58.233 29.630 0.00 0.00 30.65 2.66
257 258 7.697352 TGAGTGCAAAATTATGAACAACTTG 57.303 32.000 0.00 0.00 30.65 3.16
258 259 7.264221 TGAGTGCAAAATTATGAACAACTTGT 58.736 30.769 0.00 0.00 30.65 3.16
259 260 7.222417 TGAGTGCAAAATTATGAACAACTTGTG 59.778 33.333 0.00 0.00 30.65 3.33
260 261 7.041107 AGTGCAAAATTATGAACAACTTGTGT 58.959 30.769 0.00 0.00 44.64 3.72
262 263 8.265998 GTGCAAAATTATGAACAACTTGTGTAC 58.734 33.333 0.00 0.00 40.60 2.90
263 264 8.194104 TGCAAAATTATGAACAACTTGTGTACT 58.806 29.630 0.00 0.00 40.60 2.73
264 265 9.672086 GCAAAATTATGAACAACTTGTGTACTA 57.328 29.630 0.00 0.00 40.60 1.82
272 273 9.944376 ATGAACAACTTGTGTACTATATGTTCT 57.056 29.630 19.96 10.43 43.42 3.01
275 276 9.649167 AACAACTTGTGTACTATATGTTCTACC 57.351 33.333 0.00 0.00 40.60 3.18
277 278 7.035840 ACTTGTGTACTATATGTTCTACCCG 57.964 40.000 0.00 0.00 0.00 5.28
278 279 5.443185 TGTGTACTATATGTTCTACCCGC 57.557 43.478 0.00 0.00 0.00 6.13
279 280 5.135383 TGTGTACTATATGTTCTACCCGCT 58.865 41.667 0.00 0.00 0.00 5.52
280 281 5.009310 TGTGTACTATATGTTCTACCCGCTG 59.991 44.000 0.00 0.00 0.00 5.18
282 283 6.008331 TGTACTATATGTTCTACCCGCTGAT 58.992 40.000 0.00 0.00 0.00 2.90
283 284 6.492429 TGTACTATATGTTCTACCCGCTGATT 59.508 38.462 0.00 0.00 0.00 2.57
285 286 1.668419 ATGTTCTACCCGCTGATTGC 58.332 50.000 0.00 0.00 38.57 3.56
286 287 0.392461 TGTTCTACCCGCTGATTGCC 60.392 55.000 0.00 0.00 38.78 4.52
288 289 1.558167 TTCTACCCGCTGATTGCCCA 61.558 55.000 0.00 0.00 38.78 5.36
290 291 0.466189 CTACCCGCTGATTGCCCAAT 60.466 55.000 0.00 0.00 38.78 3.16
291 292 0.840617 TACCCGCTGATTGCCCAATA 59.159 50.000 0.00 0.00 38.78 1.90
292 293 0.466189 ACCCGCTGATTGCCCAATAG 60.466 55.000 0.00 0.00 38.78 1.73
293 294 0.466189 CCCGCTGATTGCCCAATAGT 60.466 55.000 0.00 0.00 38.78 2.12
294 295 1.392589 CCGCTGATTGCCCAATAGTT 58.607 50.000 0.00 0.00 38.78 2.24
295 296 2.571212 CCGCTGATTGCCCAATAGTTA 58.429 47.619 0.00 0.00 38.78 2.24
296 297 2.290641 CCGCTGATTGCCCAATAGTTAC 59.709 50.000 0.00 0.00 38.78 2.50
297 298 2.032894 CGCTGATTGCCCAATAGTTACG 60.033 50.000 0.00 0.00 38.78 3.18
298 299 2.290641 GCTGATTGCCCAATAGTTACGG 59.709 50.000 0.00 0.00 35.15 4.02
300 301 2.240160 TGATTGCCCAATAGTTACGGGT 59.760 45.455 0.00 0.00 42.44 5.28
301 302 3.455177 TGATTGCCCAATAGTTACGGGTA 59.545 43.478 0.00 0.00 42.44 3.69
316 317 3.040965 GGTACCCGTCGGATATGGA 57.959 57.895 14.39 0.00 36.17 3.41
317 318 1.553706 GGTACCCGTCGGATATGGAT 58.446 55.000 14.39 0.00 36.17 3.41
320 321 4.464008 GGTACCCGTCGGATATGGATATA 58.536 47.826 14.39 0.00 36.17 0.86
322 323 3.563223 ACCCGTCGGATATGGATATAGG 58.437 50.000 14.39 0.00 36.17 2.57
323 324 3.053095 ACCCGTCGGATATGGATATAGGT 60.053 47.826 14.39 0.00 36.17 3.08
324 325 4.166725 ACCCGTCGGATATGGATATAGGTA 59.833 45.833 14.39 0.00 36.17 3.08
325 326 5.135383 CCCGTCGGATATGGATATAGGTAA 58.865 45.833 14.39 0.00 36.17 2.85
326 327 5.595542 CCCGTCGGATATGGATATAGGTAAA 59.404 44.000 14.39 0.00 36.17 2.01
327 328 6.238953 CCCGTCGGATATGGATATAGGTAAAG 60.239 46.154 14.39 0.00 36.17 1.85
329 330 7.147949 CCGTCGGATATGGATATAGGTAAAGTT 60.148 40.741 4.91 0.00 36.17 2.66
330 331 8.248945 CGTCGGATATGGATATAGGTAAAGTTT 58.751 37.037 0.00 0.00 0.00 2.66
331 332 9.583765 GTCGGATATGGATATAGGTAAAGTTTC 57.416 37.037 0.00 0.00 0.00 2.78
332 333 9.316594 TCGGATATGGATATAGGTAAAGTTTCA 57.683 33.333 0.00 0.00 0.00 2.69
339 340 9.139734 TGGATATAGGTAAAGTTTCATACTCGT 57.860 33.333 0.00 0.00 35.54 4.18
340 341 9.408069 GGATATAGGTAAAGTTTCATACTCGTG 57.592 37.037 0.00 0.00 35.54 4.35
344 345 5.011329 AGGTAAAGTTTCATACTCGTGGACA 59.989 40.000 0.00 0.00 35.54 4.02
345 346 5.119743 GGTAAAGTTTCATACTCGTGGACAC 59.880 44.000 0.00 0.00 35.54 3.67
363 364 8.644318 GTGGACACGTGTATAGATAGAATTTT 57.356 34.615 23.44 0.00 0.00 1.82
364 365 8.540492 GTGGACACGTGTATAGATAGAATTTTG 58.460 37.037 23.44 0.00 0.00 2.44
365 366 8.255206 TGGACACGTGTATAGATAGAATTTTGT 58.745 33.333 23.44 0.00 0.00 2.83
366 367 9.740239 GGACACGTGTATAGATAGAATTTTGTA 57.260 33.333 23.44 0.00 0.00 2.41
411 412 8.548880 TGGATATAATATTGCTCTACCCTACC 57.451 38.462 0.00 0.00 0.00 3.18
413 414 7.567622 GGATATAATATTGCTCTACCCTACCCA 59.432 40.741 0.00 0.00 0.00 4.51
414 415 9.160412 GATATAATATTGCTCTACCCTACCCAT 57.840 37.037 0.00 0.00 0.00 4.00
417 418 7.439108 AATATTGCTCTACCCTACCCATATC 57.561 40.000 0.00 0.00 0.00 1.63
419 420 2.728013 TGCTCTACCCTACCCATATCCT 59.272 50.000 0.00 0.00 0.00 3.24
421 422 4.264262 TGCTCTACCCTACCCATATCCTAC 60.264 50.000 0.00 0.00 0.00 3.18
423 424 4.262182 TCTACCCTACCCATATCCTACCA 58.738 47.826 0.00 0.00 0.00 3.25
425 426 4.520291 ACCCTACCCATATCCTACCATT 57.480 45.455 0.00 0.00 0.00 3.16
430 431 2.996021 ACCCATATCCTACCATTGCCAT 59.004 45.455 0.00 0.00 0.00 4.40
431 432 4.183116 ACCCATATCCTACCATTGCCATA 58.817 43.478 0.00 0.00 0.00 2.74
432 433 4.018415 ACCCATATCCTACCATTGCCATAC 60.018 45.833 0.00 0.00 0.00 2.39
434 435 5.516415 CCCATATCCTACCATTGCCATACAA 60.516 44.000 0.00 0.00 44.01 2.41
435 436 5.649395 CCATATCCTACCATTGCCATACAAG 59.351 44.000 0.00 0.00 42.87 3.16
436 437 6.475504 CATATCCTACCATTGCCATACAAGA 58.524 40.000 0.00 0.00 42.87 3.02
437 438 4.422073 TCCTACCATTGCCATACAAGAG 57.578 45.455 0.00 0.00 42.87 2.85
438 439 4.037222 TCCTACCATTGCCATACAAGAGA 58.963 43.478 0.00 0.00 42.87 3.10
440 441 3.719268 ACCATTGCCATACAAGAGACA 57.281 42.857 0.00 0.00 42.87 3.41
441 442 4.032960 ACCATTGCCATACAAGAGACAA 57.967 40.909 0.00 0.00 42.87 3.18
443 444 3.758023 CCATTGCCATACAAGAGACAACA 59.242 43.478 0.00 0.00 42.87 3.33
444 445 4.218200 CCATTGCCATACAAGAGACAACAA 59.782 41.667 0.00 0.00 42.87 2.83
675 5095 1.368850 CGAGACGCGCGTATGATCA 60.369 57.895 36.47 0.00 0.00 2.92
752 5172 1.841663 CGGTCCAGCGAACAAGTTGG 61.842 60.000 7.96 0.00 42.85 3.77
788 5208 1.079405 CGGCCGGTGTCATACAAGT 60.079 57.895 20.10 0.00 0.00 3.16
900 5323 4.705519 TCGACCCCGAACGAACGC 62.706 66.667 0.00 0.00 42.51 4.84
926 5350 0.240945 GTGTATTGCGCCAAACTGCT 59.759 50.000 4.18 0.00 0.00 4.24
1000 5469 5.006261 GTATACATACACTGCATTCGTTGCA 59.994 40.000 13.59 13.59 44.45 4.08
1011 5480 4.748503 CATTCGTTGCATGCAAATACAG 57.251 40.909 33.42 20.90 37.70 2.74
1021 5490 4.380233 GCATGCAAATACAGCCAGATATCC 60.380 45.833 14.21 0.00 0.00 2.59
1024 5493 5.798132 TGCAAATACAGCCAGATATCCTAG 58.202 41.667 0.00 0.00 0.00 3.02
1026 5495 6.105333 GCAAATACAGCCAGATATCCTAGAG 58.895 44.000 0.00 0.00 0.00 2.43
1034 5503 5.483583 AGCCAGATATCCTAGAGAACAATCC 59.516 44.000 0.00 0.00 0.00 3.01
1109 5587 1.202915 TGTCTCCTTGGCAGCATTTCA 60.203 47.619 0.00 0.00 0.00 2.69
1122 5600 6.777091 TGGCAGCATTTCATACAGGTATAATT 59.223 34.615 0.00 0.00 0.00 1.40
1123 5601 7.941790 TGGCAGCATTTCATACAGGTATAATTA 59.058 33.333 0.00 0.00 0.00 1.40
1124 5602 8.960591 GGCAGCATTTCATACAGGTATAATTAT 58.039 33.333 2.97 2.97 0.00 1.28
1187 5682 7.083858 ACACATTTTGTTATGACTGTACATGC 58.916 34.615 0.00 0.00 33.09 4.06
1191 5686 8.976471 CATTTTGTTATGACTGTACATGCAAAA 58.024 29.630 21.12 21.12 42.50 2.44
1262 5945 0.029834 CTAACCCCGACGGACATACG 59.970 60.000 17.49 0.00 40.31 3.06
1318 6007 7.690256 ACATGTATTCCAGGAACTAGTTTTCT 58.310 34.615 10.02 7.98 36.02 2.52
1319 6008 7.607991 ACATGTATTCCAGGAACTAGTTTTCTG 59.392 37.037 22.56 22.56 36.02 3.02
1341 6035 4.216472 TGGTTGATCCTATTCGATCGAGAG 59.784 45.833 18.54 18.06 41.39 3.20
1342 6036 5.977209 TGGTTGATCCTATTCGATCGAGAGA 60.977 44.000 23.46 16.80 41.39 3.10
1370 6067 0.389296 TCTACCATGACACGCAACGG 60.389 55.000 0.00 0.00 0.00 4.44
1403 6102 4.508461 TTTCTTGGACTGTTCGATCGTA 57.492 40.909 15.94 1.77 0.00 3.43
1404 6103 4.508461 TTCTTGGACTGTTCGATCGTAA 57.492 40.909 15.94 5.47 0.00 3.18
1418 6117 3.740115 GATCGTAATAACAGGGGTGCAT 58.260 45.455 0.00 0.00 0.00 3.96
1897 6596 0.978146 CCCATCCTGGACTTCCTCGT 60.978 60.000 0.00 0.00 40.96 4.18
1970 6669 1.787847 CGACCCGCAGAACATCAAC 59.212 57.895 0.00 0.00 0.00 3.18
2225 6927 3.971702 GGCACACCCAAGAGGCCT 61.972 66.667 3.86 3.86 41.39 5.19
2430 7158 1.246649 TGCATGCATTTCGGTCAACT 58.753 45.000 18.46 0.00 0.00 3.16
2786 7514 9.853177 AGTAAAAGAAGAAAAGAAGAGGATTGA 57.147 29.630 0.00 0.00 0.00 2.57
2791 7519 8.347004 AGAAGAAAAGAAGAGGATTGATTTCC 57.653 34.615 0.00 0.00 35.90 3.13
2792 7520 7.946776 AGAAGAAAAGAAGAGGATTGATTTCCA 59.053 33.333 0.00 0.00 38.32 3.53
2793 7521 7.459795 AGAAAAGAAGAGGATTGATTTCCAC 57.540 36.000 0.00 0.00 38.32 4.02
2794 7522 7.237255 AGAAAAGAAGAGGATTGATTTCCACT 58.763 34.615 0.00 0.00 38.21 4.00
2795 7523 7.727634 AGAAAAGAAGAGGATTGATTTCCACTT 59.272 33.333 3.31 3.31 45.67 3.16
2800 7528 6.627087 AGAGGATTGATTTCCACTTCTACA 57.373 37.500 0.00 0.00 38.32 2.74
2801 7529 7.205515 AGAGGATTGATTTCCACTTCTACAT 57.794 36.000 0.00 0.00 38.32 2.29
2802 7530 7.278875 AGAGGATTGATTTCCACTTCTACATC 58.721 38.462 0.00 0.00 38.32 3.06
2803 7531 6.360618 AGGATTGATTTCCACTTCTACATCC 58.639 40.000 0.00 0.00 38.32 3.51
2804 7532 5.532779 GGATTGATTTCCACTTCTACATCCC 59.467 44.000 0.00 0.00 35.72 3.85
2805 7533 5.512942 TTGATTTCCACTTCTACATCCCA 57.487 39.130 0.00 0.00 0.00 4.37
2806 7534 5.715439 TGATTTCCACTTCTACATCCCAT 57.285 39.130 0.00 0.00 0.00 4.00
2807 7535 6.823286 TGATTTCCACTTCTACATCCCATA 57.177 37.500 0.00 0.00 0.00 2.74
2808 7536 7.392766 TGATTTCCACTTCTACATCCCATAT 57.607 36.000 0.00 0.00 0.00 1.78
2809 7537 7.815383 TGATTTCCACTTCTACATCCCATATT 58.185 34.615 0.00 0.00 0.00 1.28
2810 7538 8.281531 TGATTTCCACTTCTACATCCCATATTT 58.718 33.333 0.00 0.00 0.00 1.40
2811 7539 9.136323 GATTTCCACTTCTACATCCCATATTTT 57.864 33.333 0.00 0.00 0.00 1.82
2813 7541 8.974060 TTCCACTTCTACATCCCATATTTTAC 57.026 34.615 0.00 0.00 0.00 2.01
2814 7542 8.331931 TCCACTTCTACATCCCATATTTTACT 57.668 34.615 0.00 0.00 0.00 2.24
2815 7543 8.429641 TCCACTTCTACATCCCATATTTTACTC 58.570 37.037 0.00 0.00 0.00 2.59
2816 7544 8.432805 CCACTTCTACATCCCATATTTTACTCT 58.567 37.037 0.00 0.00 0.00 3.24
2817 7545 9.482627 CACTTCTACATCCCATATTTTACTCTC 57.517 37.037 0.00 0.00 0.00 3.20
2818 7546 9.213777 ACTTCTACATCCCATATTTTACTCTCA 57.786 33.333 0.00 0.00 0.00 3.27
2827 7555 9.308000 TCCCATATTTTACTCTCAATTTTGTGT 57.692 29.630 0.00 0.00 0.00 3.72
2828 7556 9.573133 CCCATATTTTACTCTCAATTTTGTGTC 57.427 33.333 0.00 0.00 0.00 3.67
2829 7557 9.573133 CCATATTTTACTCTCAATTTTGTGTCC 57.427 33.333 0.00 0.00 0.00 4.02
2834 7562 9.883142 TTTTACTCTCAATTTTGTGTCCATTTT 57.117 25.926 0.00 0.00 0.00 1.82
2835 7563 8.870160 TTACTCTCAATTTTGTGTCCATTTTG 57.130 30.769 0.00 0.00 0.00 2.44
2836 7564 5.754890 ACTCTCAATTTTGTGTCCATTTTGC 59.245 36.000 0.00 0.00 0.00 3.68
2837 7565 5.055812 TCTCAATTTTGTGTCCATTTTGCC 58.944 37.500 0.00 0.00 0.00 4.52
2838 7566 4.133078 TCAATTTTGTGTCCATTTTGCCC 58.867 39.130 0.00 0.00 0.00 5.36
2839 7567 2.629336 TTTTGTGTCCATTTTGCCCC 57.371 45.000 0.00 0.00 0.00 5.80
2840 7568 1.500474 TTTGTGTCCATTTTGCCCCA 58.500 45.000 0.00 0.00 0.00 4.96
2841 7569 1.727062 TTGTGTCCATTTTGCCCCAT 58.273 45.000 0.00 0.00 0.00 4.00
2842 7570 1.727062 TGTGTCCATTTTGCCCCATT 58.273 45.000 0.00 0.00 0.00 3.16
2843 7571 1.622811 TGTGTCCATTTTGCCCCATTC 59.377 47.619 0.00 0.00 0.00 2.67
2844 7572 1.901833 GTGTCCATTTTGCCCCATTCT 59.098 47.619 0.00 0.00 0.00 2.40
2845 7573 2.094026 GTGTCCATTTTGCCCCATTCTC 60.094 50.000 0.00 0.00 0.00 2.87
2846 7574 1.482182 GTCCATTTTGCCCCATTCTCC 59.518 52.381 0.00 0.00 0.00 3.71
2847 7575 1.362237 TCCATTTTGCCCCATTCTCCT 59.638 47.619 0.00 0.00 0.00 3.69
2848 7576 2.584965 TCCATTTTGCCCCATTCTCCTA 59.415 45.455 0.00 0.00 0.00 2.94
2849 7577 2.961062 CCATTTTGCCCCATTCTCCTAG 59.039 50.000 0.00 0.00 0.00 3.02
2850 7578 3.628257 CCATTTTGCCCCATTCTCCTAGT 60.628 47.826 0.00 0.00 0.00 2.57
2851 7579 4.386312 CCATTTTGCCCCATTCTCCTAGTA 60.386 45.833 0.00 0.00 0.00 1.82
2852 7580 3.926058 TTTGCCCCATTCTCCTAGTAC 57.074 47.619 0.00 0.00 0.00 2.73
2853 7581 1.410004 TGCCCCATTCTCCTAGTACG 58.590 55.000 0.00 0.00 0.00 3.67
2854 7582 0.680061 GCCCCATTCTCCTAGTACGG 59.320 60.000 0.00 0.00 0.00 4.02
2855 7583 1.339097 CCCCATTCTCCTAGTACGGG 58.661 60.000 2.14 2.14 0.00 5.28
2856 7584 0.680061 CCCATTCTCCTAGTACGGGC 59.320 60.000 3.50 0.00 0.00 6.13
2857 7585 0.680061 CCATTCTCCTAGTACGGGCC 59.320 60.000 0.00 0.00 0.00 5.80
2858 7586 0.680061 CATTCTCCTAGTACGGGCCC 59.320 60.000 13.57 13.57 0.00 5.80
2859 7587 0.263765 ATTCTCCTAGTACGGGCCCA 59.736 55.000 24.92 0.00 0.00 5.36
2860 7588 0.685458 TTCTCCTAGTACGGGCCCAC 60.685 60.000 24.92 14.07 0.00 4.61
2861 7589 2.042639 TCCTAGTACGGGCCCACC 60.043 66.667 24.92 8.57 0.00 4.61
2879 7607 3.697747 CGGGCCAACTGGACGGTA 61.698 66.667 4.39 0.00 47.00 4.02
2880 7608 2.046604 GGGCCAACTGGACGGTAC 60.047 66.667 4.39 0.00 47.00 3.34
2881 7609 2.590114 GGGCCAACTGGACGGTACT 61.590 63.158 4.39 0.00 47.00 2.73
2882 7610 1.373812 GGCCAACTGGACGGTACTT 59.626 57.895 0.00 0.00 37.39 2.24
2883 7611 0.250597 GGCCAACTGGACGGTACTTT 60.251 55.000 0.00 0.00 37.39 2.66
2884 7612 1.601166 GCCAACTGGACGGTACTTTT 58.399 50.000 0.00 0.00 37.39 2.27
2885 7613 2.550639 GGCCAACTGGACGGTACTTTTA 60.551 50.000 0.00 0.00 37.39 1.52
2886 7614 3.140623 GCCAACTGGACGGTACTTTTAA 58.859 45.455 0.00 0.00 37.39 1.52
2887 7615 3.754850 GCCAACTGGACGGTACTTTTAAT 59.245 43.478 0.00 0.00 37.39 1.40
2888 7616 4.216902 GCCAACTGGACGGTACTTTTAATT 59.783 41.667 0.00 0.00 37.39 1.40
2889 7617 5.278610 GCCAACTGGACGGTACTTTTAATTT 60.279 40.000 0.00 0.00 37.39 1.82
2890 7618 6.072563 GCCAACTGGACGGTACTTTTAATTTA 60.073 38.462 0.00 0.00 37.39 1.40
2891 7619 7.521910 GCCAACTGGACGGTACTTTTAATTTAA 60.522 37.037 0.00 0.00 37.39 1.52
2892 7620 7.804600 CCAACTGGACGGTACTTTTAATTTAAC 59.195 37.037 0.00 0.00 37.39 2.01
2893 7621 8.562052 CAACTGGACGGTACTTTTAATTTAACT 58.438 33.333 0.00 0.00 0.00 2.24
2894 7622 8.091385 ACTGGACGGTACTTTTAATTTAACTG 57.909 34.615 0.00 0.00 0.00 3.16
2895 7623 7.933033 ACTGGACGGTACTTTTAATTTAACTGA 59.067 33.333 0.00 0.00 0.00 3.41
2896 7624 8.314143 TGGACGGTACTTTTAATTTAACTGAG 57.686 34.615 0.00 0.00 0.00 3.35
2897 7625 7.095102 TGGACGGTACTTTTAATTTAACTGAGC 60.095 37.037 0.00 0.00 0.00 4.26
2898 7626 7.118825 GGACGGTACTTTTAATTTAACTGAGCT 59.881 37.037 0.00 0.00 0.00 4.09
2899 7627 7.803724 ACGGTACTTTTAATTTAACTGAGCTG 58.196 34.615 0.00 0.00 0.00 4.24
2900 7628 7.443272 ACGGTACTTTTAATTTAACTGAGCTGT 59.557 33.333 0.00 0.00 0.00 4.40
2901 7629 8.287503 CGGTACTTTTAATTTAACTGAGCTGTT 58.712 33.333 0.00 0.00 0.00 3.16
2902 7630 9.961265 GGTACTTTTAATTTAACTGAGCTGTTT 57.039 29.630 0.00 0.00 0.00 2.83
2929 7657 9.898152 TTTTTATTTCTCTTTGGTTGTTGGATT 57.102 25.926 0.00 0.00 0.00 3.01
2930 7658 9.898152 TTTTATTTCTCTTTGGTTGTTGGATTT 57.102 25.926 0.00 0.00 0.00 2.17
2931 7659 9.898152 TTTATTTCTCTTTGGTTGTTGGATTTT 57.102 25.926 0.00 0.00 0.00 1.82
2932 7660 9.898152 TTATTTCTCTTTGGTTGTTGGATTTTT 57.102 25.926 0.00 0.00 0.00 1.94
2952 7680 5.968528 TTTTACGTGCCAAATATCAACCT 57.031 34.783 0.00 0.00 0.00 3.50
2953 7681 7.450124 TTTTTACGTGCCAAATATCAACCTA 57.550 32.000 0.00 0.00 0.00 3.08
2954 7682 7.633193 TTTTACGTGCCAAATATCAACCTAT 57.367 32.000 0.00 0.00 0.00 2.57
2955 7683 7.633193 TTTACGTGCCAAATATCAACCTATT 57.367 32.000 0.00 0.00 0.00 1.73
2956 7684 8.734218 TTTACGTGCCAAATATCAACCTATTA 57.266 30.769 0.00 0.00 0.00 0.98
2957 7685 8.734218 TTACGTGCCAAATATCAACCTATTAA 57.266 30.769 0.00 0.00 0.00 1.40
2958 7686 7.633193 ACGTGCCAAATATCAACCTATTAAA 57.367 32.000 0.00 0.00 0.00 1.52
2959 7687 8.057536 ACGTGCCAAATATCAACCTATTAAAA 57.942 30.769 0.00 0.00 0.00 1.52
2960 7688 8.524487 ACGTGCCAAATATCAACCTATTAAAAA 58.476 29.630 0.00 0.00 0.00 1.94
2961 7689 9.528018 CGTGCCAAATATCAACCTATTAAAAAT 57.472 29.630 0.00 0.00 0.00 1.82
3042 7770 8.877864 TTGTTCATTATCCATTACAAAGAGGT 57.122 30.769 0.00 0.00 0.00 3.85
3043 7771 8.877864 TGTTCATTATCCATTACAAAGAGGTT 57.122 30.769 0.00 0.00 0.00 3.50
3044 7772 8.956426 TGTTCATTATCCATTACAAAGAGGTTC 58.044 33.333 0.00 0.00 0.00 3.62
3045 7773 8.956426 GTTCATTATCCATTACAAAGAGGTTCA 58.044 33.333 0.00 0.00 0.00 3.18
3046 7774 9.699410 TTCATTATCCATTACAAAGAGGTTCAT 57.301 29.630 0.00 0.00 0.00 2.57
3047 7775 9.342308 TCATTATCCATTACAAAGAGGTTCATC 57.658 33.333 0.00 0.00 0.00 2.92
3048 7776 9.123902 CATTATCCATTACAAAGAGGTTCATCA 57.876 33.333 0.00 0.00 0.00 3.07
3049 7777 9.872684 ATTATCCATTACAAAGAGGTTCATCAT 57.127 29.630 0.00 0.00 0.00 2.45
3050 7778 7.578310 ATCCATTACAAAGAGGTTCATCATG 57.422 36.000 0.00 0.00 0.00 3.07
3051 7779 6.484288 TCCATTACAAAGAGGTTCATCATGT 58.516 36.000 0.00 0.00 0.00 3.21
3052 7780 6.947733 TCCATTACAAAGAGGTTCATCATGTT 59.052 34.615 0.00 0.00 0.00 2.71
3053 7781 7.451255 TCCATTACAAAGAGGTTCATCATGTTT 59.549 33.333 0.00 0.00 0.00 2.83
3054 7782 8.090214 CCATTACAAAGAGGTTCATCATGTTTT 58.910 33.333 0.00 0.00 0.00 2.43
3055 7783 9.480053 CATTACAAAGAGGTTCATCATGTTTTT 57.520 29.630 0.00 0.00 0.00 1.94
3056 7784 9.696917 ATTACAAAGAGGTTCATCATGTTTTTC 57.303 29.630 0.00 0.00 0.00 2.29
3057 7785 6.208644 ACAAAGAGGTTCATCATGTTTTTCG 58.791 36.000 0.00 0.00 0.00 3.46
3058 7786 4.425577 AGAGGTTCATCATGTTTTTCGC 57.574 40.909 0.00 0.00 0.00 4.70
3059 7787 3.820467 AGAGGTTCATCATGTTTTTCGCA 59.180 39.130 0.00 0.00 0.00 5.10
3060 7788 4.278170 AGAGGTTCATCATGTTTTTCGCAA 59.722 37.500 0.00 0.00 0.00 4.85
3061 7789 4.942852 AGGTTCATCATGTTTTTCGCAAA 58.057 34.783 0.00 0.00 0.00 3.68
3062 7790 5.355596 AGGTTCATCATGTTTTTCGCAAAA 58.644 33.333 0.00 0.00 0.00 2.44
3063 7791 5.814705 AGGTTCATCATGTTTTTCGCAAAAA 59.185 32.000 0.00 0.00 37.99 1.94
3083 7811 5.828299 AAAAAGAGGTTCATCGTGTTTGA 57.172 34.783 0.00 0.00 30.07 2.69
3084 7812 5.828299 AAAAGAGGTTCATCGTGTTTGAA 57.172 34.783 0.00 0.00 30.07 2.69
3085 7813 6.391227 AAAAGAGGTTCATCGTGTTTGAAT 57.609 33.333 0.00 0.00 35.68 2.57
3086 7814 5.362556 AAGAGGTTCATCGTGTTTGAATG 57.637 39.130 0.00 0.00 35.68 2.67
3087 7815 4.389374 AGAGGTTCATCGTGTTTGAATGT 58.611 39.130 0.00 0.00 35.68 2.71
3088 7816 5.547465 AGAGGTTCATCGTGTTTGAATGTA 58.453 37.500 0.00 0.00 35.68 2.29
3089 7817 6.173339 AGAGGTTCATCGTGTTTGAATGTAT 58.827 36.000 0.00 0.00 35.68 2.29
3090 7818 7.327975 AGAGGTTCATCGTGTTTGAATGTATA 58.672 34.615 0.00 0.00 35.68 1.47
3091 7819 7.822334 AGAGGTTCATCGTGTTTGAATGTATAA 59.178 33.333 0.00 0.00 35.68 0.98
3092 7820 8.330466 AGGTTCATCGTGTTTGAATGTATAAA 57.670 30.769 0.00 0.00 35.68 1.40
3093 7821 8.788806 AGGTTCATCGTGTTTGAATGTATAAAA 58.211 29.630 0.00 0.00 35.68 1.52
3094 7822 9.400638 GGTTCATCGTGTTTGAATGTATAAAAA 57.599 29.630 0.00 0.00 35.68 1.94
3139 7867 9.556030 AAAAACGAAAACAAAAACAAAGAACAA 57.444 22.222 0.00 0.00 0.00 2.83
3140 7868 9.556030 AAAACGAAAACAAAAACAAAGAACAAA 57.444 22.222 0.00 0.00 0.00 2.83
3141 7869 9.556030 AAACGAAAACAAAAACAAAGAACAAAA 57.444 22.222 0.00 0.00 0.00 2.44
3142 7870 9.556030 AACGAAAACAAAAACAAAGAACAAAAA 57.444 22.222 0.00 0.00 0.00 1.94
3172 7900 9.508642 AAAATAGAAAACCAACAAAAACCAGAA 57.491 25.926 0.00 0.00 0.00 3.02
3173 7901 9.679661 AAATAGAAAACCAACAAAAACCAGAAT 57.320 25.926 0.00 0.00 0.00 2.40
3177 7905 9.508642 AGAAAACCAACAAAAACCAGAATAAAA 57.491 25.926 0.00 0.00 0.00 1.52
3201 7929 9.516314 AAATTAAAGAGAGAAGAAAACCGTTTG 57.484 29.630 0.00 0.00 0.00 2.93
3202 7930 7.852971 TTAAAGAGAGAAGAAAACCGTTTGA 57.147 32.000 0.00 0.00 0.00 2.69
3203 7931 6.753107 AAAGAGAGAAGAAAACCGTTTGAA 57.247 33.333 0.00 0.00 0.00 2.69
3204 7932 6.753107 AAGAGAGAAGAAAACCGTTTGAAA 57.247 33.333 0.00 0.00 0.00 2.69
3205 7933 6.753107 AGAGAGAAGAAAACCGTTTGAAAA 57.247 33.333 0.00 0.00 0.00 2.29
3206 7934 7.334844 AGAGAGAAGAAAACCGTTTGAAAAT 57.665 32.000 0.00 0.00 0.00 1.82
3207 7935 8.446599 AGAGAGAAGAAAACCGTTTGAAAATA 57.553 30.769 0.00 0.00 0.00 1.40
3208 7936 8.343366 AGAGAGAAGAAAACCGTTTGAAAATAC 58.657 33.333 0.00 0.00 0.00 1.89
3209 7937 8.221965 AGAGAAGAAAACCGTTTGAAAATACT 57.778 30.769 0.00 0.00 0.00 2.12
3210 7938 9.333724 AGAGAAGAAAACCGTTTGAAAATACTA 57.666 29.630 0.00 0.00 0.00 1.82
3211 7939 9.595357 GAGAAGAAAACCGTTTGAAAATACTAG 57.405 33.333 0.00 0.00 0.00 2.57
3212 7940 8.074370 AGAAGAAAACCGTTTGAAAATACTAGC 58.926 33.333 0.00 0.00 0.00 3.42
3213 7941 7.266922 AGAAAACCGTTTGAAAATACTAGCA 57.733 32.000 0.00 0.00 0.00 3.49
3214 7942 7.136772 AGAAAACCGTTTGAAAATACTAGCAC 58.863 34.615 0.00 0.00 0.00 4.40
3215 7943 6.380095 AAACCGTTTGAAAATACTAGCACA 57.620 33.333 0.00 0.00 0.00 4.57
3216 7944 6.569179 AACCGTTTGAAAATACTAGCACAT 57.431 33.333 0.00 0.00 0.00 3.21
3217 7945 7.675962 AACCGTTTGAAAATACTAGCACATA 57.324 32.000 0.00 0.00 0.00 2.29
3218 7946 7.859325 ACCGTTTGAAAATACTAGCACATAT 57.141 32.000 0.00 0.00 0.00 1.78
3219 7947 7.693952 ACCGTTTGAAAATACTAGCACATATG 58.306 34.615 0.00 0.00 0.00 1.78
3228 7956 3.903783 GCACATATGCCCGTGTGT 58.096 55.556 1.58 0.00 46.97 3.72
3229 7957 2.179764 GCACATATGCCCGTGTGTT 58.820 52.632 1.58 0.00 46.97 3.32
3230 7958 0.179166 GCACATATGCCCGTGTGTTG 60.179 55.000 1.58 0.00 46.97 3.33
3231 7959 0.179166 CACATATGCCCGTGTGTTGC 60.179 55.000 1.58 0.00 40.54 4.17
3232 7960 0.607762 ACATATGCCCGTGTGTTGCA 60.608 50.000 1.58 0.00 39.68 4.08
3233 7961 0.525311 CATATGCCCGTGTGTTGCAA 59.475 50.000 0.00 0.00 38.69 4.08
3234 7962 0.525761 ATATGCCCGTGTGTTGCAAC 59.474 50.000 22.83 22.83 38.69 4.17
3235 7963 1.846849 TATGCCCGTGTGTTGCAACG 61.847 55.000 23.79 13.15 38.69 4.10
3236 7964 4.622456 GCCCGTGTGTTGCAACGG 62.622 66.667 23.79 21.12 39.63 4.44
3237 7965 2.897846 CCCGTGTGTTGCAACGGA 60.898 61.111 25.44 12.15 41.17 4.69
3238 7966 2.473760 CCCGTGTGTTGCAACGGAA 61.474 57.895 25.44 11.30 41.17 4.30
3239 7967 1.429825 CCGTGTGTTGCAACGGAAA 59.570 52.632 23.79 4.07 41.17 3.13
3240 7968 0.179161 CCGTGTGTTGCAACGGAAAA 60.179 50.000 23.79 3.67 41.17 2.29
3241 7969 1.187715 CGTGTGTTGCAACGGAAAAG 58.812 50.000 23.79 9.67 0.00 2.27
3242 7970 1.202087 CGTGTGTTGCAACGGAAAAGA 60.202 47.619 23.79 2.31 0.00 2.52
3243 7971 2.729467 CGTGTGTTGCAACGGAAAAGAA 60.729 45.455 23.79 1.33 0.00 2.52
3244 7972 3.246619 GTGTGTTGCAACGGAAAAGAAA 58.753 40.909 23.79 0.57 0.00 2.52
3245 7973 3.862845 GTGTGTTGCAACGGAAAAGAAAT 59.137 39.130 23.79 0.00 0.00 2.17
3246 7974 4.328712 GTGTGTTGCAACGGAAAAGAAATT 59.671 37.500 23.79 0.00 0.00 1.82
3247 7975 4.932200 TGTGTTGCAACGGAAAAGAAATTT 59.068 33.333 23.79 0.00 0.00 1.82
3248 7976 6.035112 GTGTGTTGCAACGGAAAAGAAATTTA 59.965 34.615 23.79 0.00 0.00 1.40
3249 7977 6.035112 TGTGTTGCAACGGAAAAGAAATTTAC 59.965 34.615 23.79 11.69 0.00 2.01
3259 7987 7.273188 GGAAAAGAAATTTACGGTTATGTGC 57.727 36.000 0.00 0.00 0.00 4.57
3260 7988 6.864165 GGAAAAGAAATTTACGGTTATGTGCA 59.136 34.615 0.00 0.00 0.00 4.57
3261 7989 7.382759 GGAAAAGAAATTTACGGTTATGTGCAA 59.617 33.333 0.00 0.00 0.00 4.08
3262 7990 8.825667 AAAAGAAATTTACGGTTATGTGCAAT 57.174 26.923 0.00 0.00 0.00 3.56
3263 7991 8.460831 AAAGAAATTTACGGTTATGTGCAATC 57.539 30.769 0.00 0.00 0.00 2.67
3264 7992 7.151999 AGAAATTTACGGTTATGTGCAATCA 57.848 32.000 0.00 0.00 0.00 2.57
3265 7993 7.027161 AGAAATTTACGGTTATGTGCAATCAC 58.973 34.615 0.00 0.00 43.40 3.06
3277 8005 3.173599 GTGCAATCACAATGGTTCATCG 58.826 45.455 0.00 0.00 42.66 3.84
3278 8006 2.819019 TGCAATCACAATGGTTCATCGT 59.181 40.909 0.00 0.00 0.00 3.73
3279 8007 3.173599 GCAATCACAATGGTTCATCGTG 58.826 45.455 0.00 0.00 30.86 4.35
3280 8008 3.119884 GCAATCACAATGGTTCATCGTGA 60.120 43.478 4.45 4.45 41.17 4.35
3281 8009 4.615682 GCAATCACAATGGTTCATCGTGAA 60.616 41.667 5.87 0.00 40.46 3.18
3282 8010 5.643664 CAATCACAATGGTTCATCGTGAAT 58.356 37.500 5.87 0.00 40.46 2.57
3283 8011 6.677675 GCAATCACAATGGTTCATCGTGAATA 60.678 38.462 5.87 0.00 40.46 1.75
3284 8012 5.794687 TCACAATGGTTCATCGTGAATAC 57.205 39.130 0.00 2.64 35.27 1.89
3285 8013 5.241662 TCACAATGGTTCATCGTGAATACA 58.758 37.500 0.00 6.97 35.27 2.29
3286 8014 5.121611 TCACAATGGTTCATCGTGAATACAC 59.878 40.000 0.00 0.00 35.27 2.90
3287 8015 5.122239 CACAATGGTTCATCGTGAATACACT 59.878 40.000 4.21 0.00 43.99 3.55
3288 8016 6.312672 CACAATGGTTCATCGTGAATACACTA 59.687 38.462 4.21 0.00 43.99 2.74
3289 8017 7.011389 CACAATGGTTCATCGTGAATACACTAT 59.989 37.037 4.21 0.00 43.99 2.12
3290 8018 7.011389 ACAATGGTTCATCGTGAATACACTATG 59.989 37.037 0.00 0.00 45.42 2.23
3298 8026 6.864560 TCGTGAATACACTATGAAGAAACG 57.135 37.500 0.00 0.00 43.99 3.60
3299 8027 5.287752 TCGTGAATACACTATGAAGAAACGC 59.712 40.000 0.00 0.00 43.99 4.84
3300 8028 5.288712 CGTGAATACACTATGAAGAAACGCT 59.711 40.000 0.00 0.00 43.99 5.07
3301 8029 6.471198 CGTGAATACACTATGAAGAAACGCTA 59.529 38.462 0.00 0.00 43.99 4.26
3302 8030 7.305475 CGTGAATACACTATGAAGAAACGCTAG 60.305 40.741 0.00 0.00 43.99 3.42
3303 8031 7.488471 GTGAATACACTATGAAGAAACGCTAGT 59.512 37.037 0.00 0.00 42.99 2.57
3304 8032 8.033038 TGAATACACTATGAAGAAACGCTAGTT 58.967 33.333 0.00 0.00 43.50 2.24
3305 8033 7.757097 ATACACTATGAAGAAACGCTAGTTG 57.243 36.000 0.00 0.00 41.05 3.16
3306 8034 5.539048 ACACTATGAAGAAACGCTAGTTGT 58.461 37.500 0.00 0.00 41.05 3.32
3307 8035 5.989777 ACACTATGAAGAAACGCTAGTTGTT 59.010 36.000 0.00 0.00 41.05 2.83
3308 8036 6.145696 ACACTATGAAGAAACGCTAGTTGTTC 59.854 38.462 3.46 0.04 41.05 3.18
3309 8037 5.638234 ACTATGAAGAAACGCTAGTTGTTCC 59.362 40.000 3.46 0.00 41.05 3.62
3310 8038 3.799366 TGAAGAAACGCTAGTTGTTCCA 58.201 40.909 3.46 0.00 41.05 3.53
3311 8039 3.558418 TGAAGAAACGCTAGTTGTTCCAC 59.442 43.478 3.46 0.63 41.05 4.02
3312 8040 2.490991 AGAAACGCTAGTTGTTCCACC 58.509 47.619 3.46 0.00 41.05 4.61
3313 8041 2.104281 AGAAACGCTAGTTGTTCCACCT 59.896 45.455 3.46 0.00 41.05 4.00
3314 8042 3.322828 AGAAACGCTAGTTGTTCCACCTA 59.677 43.478 3.46 0.00 41.05 3.08
3315 8043 2.738013 ACGCTAGTTGTTCCACCTAC 57.262 50.000 0.00 0.00 0.00 3.18
3316 8044 1.068055 ACGCTAGTTGTTCCACCTACG 60.068 52.381 0.00 0.00 0.00 3.51
3317 8045 1.068055 CGCTAGTTGTTCCACCTACGT 60.068 52.381 0.00 0.00 0.00 3.57
3318 8046 2.162208 CGCTAGTTGTTCCACCTACGTA 59.838 50.000 0.00 0.00 0.00 3.57
3319 8047 3.181493 CGCTAGTTGTTCCACCTACGTAT 60.181 47.826 0.00 0.00 0.00 3.06
3320 8048 4.676196 CGCTAGTTGTTCCACCTACGTATT 60.676 45.833 0.00 0.00 0.00 1.89
3321 8049 4.565564 GCTAGTTGTTCCACCTACGTATTG 59.434 45.833 0.00 0.00 0.00 1.90
3322 8050 4.877378 AGTTGTTCCACCTACGTATTGA 57.123 40.909 0.00 0.00 0.00 2.57
3323 8051 5.217978 AGTTGTTCCACCTACGTATTGAA 57.782 39.130 0.00 0.00 0.00 2.69
3324 8052 5.613329 AGTTGTTCCACCTACGTATTGAAA 58.387 37.500 0.00 0.00 0.00 2.69
3325 8053 5.699458 AGTTGTTCCACCTACGTATTGAAAG 59.301 40.000 0.00 0.00 0.00 2.62
3326 8054 5.471556 TGTTCCACCTACGTATTGAAAGA 57.528 39.130 0.00 0.00 0.00 2.52
3327 8055 5.856156 TGTTCCACCTACGTATTGAAAGAA 58.144 37.500 0.00 0.00 0.00 2.52
3328 8056 6.289834 TGTTCCACCTACGTATTGAAAGAAA 58.710 36.000 0.00 0.00 0.00 2.52
3329 8057 6.203338 TGTTCCACCTACGTATTGAAAGAAAC 59.797 38.462 0.00 0.00 0.00 2.78
3330 8058 4.925054 TCCACCTACGTATTGAAAGAAACG 59.075 41.667 0.00 0.00 40.99 3.60
3331 8059 4.435121 CCACCTACGTATTGAAAGAAACGC 60.435 45.833 0.00 0.00 38.87 4.84
3332 8060 4.387862 CACCTACGTATTGAAAGAAACGCT 59.612 41.667 0.00 0.00 38.87 5.07
3333 8061 4.387862 ACCTACGTATTGAAAGAAACGCTG 59.612 41.667 0.00 0.00 38.87 5.18
3334 8062 4.624024 CCTACGTATTGAAAGAAACGCTGA 59.376 41.667 0.00 0.00 38.87 4.26
3335 8063 5.291128 CCTACGTATTGAAAGAAACGCTGAT 59.709 40.000 0.00 0.00 38.87 2.90
3336 8064 5.607119 ACGTATTGAAAGAAACGCTGATT 57.393 34.783 0.00 0.00 38.87 2.57
3337 8065 5.382303 ACGTATTGAAAGAAACGCTGATTG 58.618 37.500 0.00 0.00 38.87 2.67
3338 8066 4.260656 CGTATTGAAAGAAACGCTGATTGC 59.739 41.667 0.00 0.00 38.57 3.56
3339 8067 2.704725 TGAAAGAAACGCTGATTGCC 57.295 45.000 0.00 0.00 38.78 4.52
3340 8068 1.269448 TGAAAGAAACGCTGATTGCCC 59.731 47.619 0.00 0.00 38.78 5.36
3341 8069 0.603065 AAAGAAACGCTGATTGCCCC 59.397 50.000 0.00 0.00 38.78 5.80
3342 8070 0.539438 AAGAAACGCTGATTGCCCCA 60.539 50.000 0.00 0.00 38.78 4.96
3343 8071 0.323725 AGAAACGCTGATTGCCCCAT 60.324 50.000 0.00 0.00 38.78 4.00
3344 8072 0.532115 GAAACGCTGATTGCCCCATT 59.468 50.000 0.00 0.00 38.78 3.16
3345 8073 0.532115 AAACGCTGATTGCCCCATTC 59.468 50.000 0.00 0.00 38.78 2.67
3346 8074 0.611618 AACGCTGATTGCCCCATTCA 60.612 50.000 0.00 0.00 38.78 2.57
3347 8075 1.315257 ACGCTGATTGCCCCATTCAC 61.315 55.000 0.00 0.00 38.78 3.18
3348 8076 1.818555 GCTGATTGCCCCATTCACC 59.181 57.895 0.00 0.00 35.15 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 9.928618 TCCTGGAAATTCATAACATATTTGGTA 57.071 29.630 0.00 0.00 0.00 3.25
20 21 8.695456 GTCCTGGAAATTCATAACATATTTGGT 58.305 33.333 0.00 0.00 0.00 3.67
21 22 8.917088 AGTCCTGGAAATTCATAACATATTTGG 58.083 33.333 0.00 0.00 0.00 3.28
22 23 9.956720 GAGTCCTGGAAATTCATAACATATTTG 57.043 33.333 0.00 0.00 0.00 2.32
23 24 9.927081 AGAGTCCTGGAAATTCATAACATATTT 57.073 29.630 0.00 0.00 0.00 1.40
24 25 9.347240 CAGAGTCCTGGAAATTCATAACATATT 57.653 33.333 0.00 0.00 36.77 1.28
27 28 6.962182 TCAGAGTCCTGGAAATTCATAACAT 58.038 36.000 0.00 0.00 40.76 2.71
28 29 6.373005 TCAGAGTCCTGGAAATTCATAACA 57.627 37.500 0.00 0.00 40.76 2.41
29 30 6.825721 ACATCAGAGTCCTGGAAATTCATAAC 59.174 38.462 0.00 0.00 40.76 1.89
31 32 6.566079 ACATCAGAGTCCTGGAAATTCATA 57.434 37.500 0.00 0.00 40.76 2.15
32 33 5.447778 ACATCAGAGTCCTGGAAATTCAT 57.552 39.130 0.00 0.00 40.76 2.57
33 34 4.916041 ACATCAGAGTCCTGGAAATTCA 57.084 40.909 0.00 0.00 40.76 2.57
35 36 5.249393 ACTGTACATCAGAGTCCTGGAAATT 59.751 40.000 0.00 0.00 46.27 1.82
36 37 4.780021 ACTGTACATCAGAGTCCTGGAAAT 59.220 41.667 0.00 0.00 46.27 2.17
37 38 4.160329 ACTGTACATCAGAGTCCTGGAAA 58.840 43.478 0.00 0.00 46.27 3.13
38 39 3.764434 GACTGTACATCAGAGTCCTGGAA 59.236 47.826 0.00 0.00 46.27 3.53
39 40 3.245264 TGACTGTACATCAGAGTCCTGGA 60.245 47.826 9.07 0.00 44.98 3.86
41 42 4.998671 ATGACTGTACATCAGAGTCCTG 57.001 45.455 9.07 0.00 44.98 3.86
42 43 4.774726 ACAATGACTGTACATCAGAGTCCT 59.225 41.667 9.07 0.00 44.98 3.85
44 45 5.714047 TGACAATGACTGTACATCAGAGTC 58.286 41.667 20.62 20.62 45.62 3.36
45 46 5.728637 TGACAATGACTGTACATCAGAGT 57.271 39.130 0.00 5.74 46.27 3.24
49 50 8.882736 GTTTCATATGACAATGACTGTACATCA 58.117 33.333 4.48 3.25 38.84 3.07
50 51 9.102757 AGTTTCATATGACAATGACTGTACATC 57.897 33.333 4.48 0.00 38.84 3.06
51 52 8.886719 CAGTTTCATATGACAATGACTGTACAT 58.113 33.333 12.76 0.00 38.84 2.29
52 53 7.334171 CCAGTTTCATATGACAATGACTGTACA 59.666 37.037 18.30 0.00 38.84 2.90
53 54 7.549134 TCCAGTTTCATATGACAATGACTGTAC 59.451 37.037 18.30 0.00 38.84 2.90
54 55 7.549134 GTCCAGTTTCATATGACAATGACTGTA 59.451 37.037 18.30 7.05 38.84 2.74
55 56 6.372659 GTCCAGTTTCATATGACAATGACTGT 59.627 38.462 18.30 0.00 42.61 3.55
56 57 6.183360 GGTCCAGTTTCATATGACAATGACTG 60.183 42.308 18.30 17.62 35.63 3.51
57 58 5.882557 GGTCCAGTTTCATATGACAATGACT 59.117 40.000 18.30 9.16 35.63 3.41
59 60 6.065976 AGGTCCAGTTTCATATGACAATGA 57.934 37.500 18.30 4.65 34.07 2.57
60 61 6.764308 AAGGTCCAGTTTCATATGACAATG 57.236 37.500 11.43 11.43 0.00 2.82
70 71 9.010029 GTTGAAGAATATTAAGGTCCAGTTTCA 57.990 33.333 0.00 0.00 0.00 2.69
71 72 8.459635 GGTTGAAGAATATTAAGGTCCAGTTTC 58.540 37.037 0.00 0.00 0.00 2.78
73 74 7.466804 TGGTTGAAGAATATTAAGGTCCAGTT 58.533 34.615 0.00 0.00 0.00 3.16
74 75 7.027874 TGGTTGAAGAATATTAAGGTCCAGT 57.972 36.000 0.00 0.00 0.00 4.00
75 76 7.775093 TGATGGTTGAAGAATATTAAGGTCCAG 59.225 37.037 0.00 0.00 0.00 3.86
76 77 7.638444 TGATGGTTGAAGAATATTAAGGTCCA 58.362 34.615 0.00 0.00 0.00 4.02
77 78 8.697507 ATGATGGTTGAAGAATATTAAGGTCC 57.302 34.615 0.00 0.00 0.00 4.46
86 87 9.460019 TGTTTGACATATGATGGTTGAAGAATA 57.540 29.630 10.38 0.00 33.60 1.75
87 88 8.352137 TGTTTGACATATGATGGTTGAAGAAT 57.648 30.769 10.38 0.00 33.60 2.40
89 90 7.448161 ACTTGTTTGACATATGATGGTTGAAGA 59.552 33.333 10.38 0.00 33.60 2.87
92 93 6.714356 TGACTTGTTTGACATATGATGGTTGA 59.286 34.615 10.38 0.00 33.60 3.18
93 94 6.912082 TGACTTGTTTGACATATGATGGTTG 58.088 36.000 10.38 0.00 33.60 3.77
94 95 7.414429 CGATGACTTGTTTGACATATGATGGTT 60.414 37.037 10.38 0.00 33.60 3.67
95 96 6.037500 CGATGACTTGTTTGACATATGATGGT 59.962 38.462 10.38 0.00 33.60 3.55
96 97 6.424683 CGATGACTTGTTTGACATATGATGG 58.575 40.000 10.38 0.00 33.60 3.51
97 98 6.258507 TCCGATGACTTGTTTGACATATGATG 59.741 38.462 10.38 0.00 0.00 3.07
98 99 6.348498 TCCGATGACTTGTTTGACATATGAT 58.652 36.000 10.38 0.00 0.00 2.45
99 100 5.729510 TCCGATGACTTGTTTGACATATGA 58.270 37.500 10.38 0.00 0.00 2.15
100 101 6.421377 TTCCGATGACTTGTTTGACATATG 57.579 37.500 0.00 0.00 0.00 1.78
101 102 7.447374 TTTTCCGATGACTTGTTTGACATAT 57.553 32.000 0.00 0.00 0.00 1.78
102 103 6.869315 TTTTCCGATGACTTGTTTGACATA 57.131 33.333 0.00 0.00 0.00 2.29
103 104 5.766150 TTTTCCGATGACTTGTTTGACAT 57.234 34.783 0.00 0.00 0.00 3.06
106 107 4.217550 GGGATTTTCCGATGACTTGTTTGA 59.782 41.667 0.00 0.00 37.43 2.69
107 108 4.485163 GGGATTTTCCGATGACTTGTTTG 58.515 43.478 0.00 0.00 37.43 2.93
108 109 4.783764 GGGATTTTCCGATGACTTGTTT 57.216 40.909 0.00 0.00 37.43 2.83
120 121 1.154035 CGTTGCTGCGGGATTTTCC 60.154 57.895 0.00 0.00 35.23 3.13
121 122 1.801512 GCGTTGCTGCGGGATTTTC 60.802 57.895 0.00 0.00 0.00 2.29
122 123 2.258286 GCGTTGCTGCGGGATTTT 59.742 55.556 0.00 0.00 0.00 1.82
139 140 1.024579 AAACTAGACAATGCCCCGCG 61.025 55.000 0.00 0.00 0.00 6.46
140 141 1.173913 AAAACTAGACAATGCCCCGC 58.826 50.000 0.00 0.00 0.00 6.13
141 142 4.202010 CCATAAAAACTAGACAATGCCCCG 60.202 45.833 0.00 0.00 0.00 5.73
142 143 4.709886 ACCATAAAAACTAGACAATGCCCC 59.290 41.667 0.00 0.00 0.00 5.80
144 145 5.650543 CCACCATAAAAACTAGACAATGCC 58.349 41.667 0.00 0.00 0.00 4.40
145 146 5.102313 GCCACCATAAAAACTAGACAATGC 58.898 41.667 0.00 0.00 0.00 3.56
146 147 5.184864 TGGCCACCATAAAAACTAGACAATG 59.815 40.000 0.00 0.00 0.00 2.82
149 150 4.374689 TGGCCACCATAAAAACTAGACA 57.625 40.909 0.00 0.00 0.00 3.41
150 151 4.705023 ACATGGCCACCATAAAAACTAGAC 59.295 41.667 8.16 0.00 43.15 2.59
151 152 4.929479 ACATGGCCACCATAAAAACTAGA 58.071 39.130 8.16 0.00 43.15 2.43
152 153 5.885912 AGTACATGGCCACCATAAAAACTAG 59.114 40.000 8.16 0.00 43.15 2.57
153 154 5.822204 AGTACATGGCCACCATAAAAACTA 58.178 37.500 8.16 0.00 43.15 2.24
155 156 4.461081 TGAGTACATGGCCACCATAAAAAC 59.539 41.667 8.16 0.00 43.15 2.43
163 164 2.224305 GGTAGATGAGTACATGGCCACC 60.224 54.545 8.16 0.00 36.82 4.61
164 165 2.700897 AGGTAGATGAGTACATGGCCAC 59.299 50.000 8.16 0.00 36.82 5.01
168 169 7.726216 TCAATAACAGGTAGATGAGTACATGG 58.274 38.462 0.00 0.00 38.69 3.66
210 211 9.414295 CTCATTGATAGCACATTTGAAGAAAAA 57.586 29.630 0.00 0.00 0.00 1.94
213 214 7.532571 CACTCATTGATAGCACATTTGAAGAA 58.467 34.615 0.00 0.00 0.00 2.52
214 215 6.403964 GCACTCATTGATAGCACATTTGAAGA 60.404 38.462 5.81 0.00 0.00 2.87
216 217 5.183522 TGCACTCATTGATAGCACATTTGAA 59.816 36.000 8.55 0.00 0.00 2.69
217 218 4.701171 TGCACTCATTGATAGCACATTTGA 59.299 37.500 8.55 0.00 0.00 2.69
218 219 4.989044 TGCACTCATTGATAGCACATTTG 58.011 39.130 8.55 0.00 0.00 2.32
219 220 5.648178 TTGCACTCATTGATAGCACATTT 57.352 34.783 11.35 0.00 34.56 2.32
221 222 5.648178 TTTTGCACTCATTGATAGCACAT 57.352 34.783 11.35 0.00 34.56 3.21
222 223 5.648178 ATTTTGCACTCATTGATAGCACA 57.352 34.783 11.35 4.51 34.56 4.57
223 224 7.916977 TCATAATTTTGCACTCATTGATAGCAC 59.083 33.333 11.35 0.00 34.56 4.40
225 226 8.749499 GTTCATAATTTTGCACTCATTGATAGC 58.251 33.333 0.00 4.12 0.00 2.97
226 227 9.791820 TGTTCATAATTTTGCACTCATTGATAG 57.208 29.630 0.00 0.00 0.00 2.08
228 229 8.928733 GTTGTTCATAATTTTGCACTCATTGAT 58.071 29.630 0.00 0.00 0.00 2.57
229 230 8.143193 AGTTGTTCATAATTTTGCACTCATTGA 58.857 29.630 0.00 0.00 0.00 2.57
230 231 8.301730 AGTTGTTCATAATTTTGCACTCATTG 57.698 30.769 0.00 0.00 0.00 2.82
231 232 8.767085 CAAGTTGTTCATAATTTTGCACTCATT 58.233 29.630 0.00 0.00 0.00 2.57
232 233 7.927629 ACAAGTTGTTCATAATTTTGCACTCAT 59.072 29.630 1.64 0.00 0.00 2.90
233 234 7.222417 CACAAGTTGTTCATAATTTTGCACTCA 59.778 33.333 5.57 0.00 0.00 3.41
234 235 7.222611 ACACAAGTTGTTCATAATTTTGCACTC 59.777 33.333 5.57 0.00 33.09 3.51
236 237 7.232945 ACACAAGTTGTTCATAATTTTGCAC 57.767 32.000 5.57 0.00 33.09 4.57
238 239 8.574196 AGTACACAAGTTGTTCATAATTTTGC 57.426 30.769 5.57 0.00 39.91 3.68
246 247 9.944376 AGAACATATAGTACACAAGTTGTTCAT 57.056 29.630 5.57 0.00 42.42 2.57
249 250 9.649167 GGTAGAACATATAGTACACAAGTTGTT 57.351 33.333 5.57 1.02 39.91 2.83
250 251 8.255905 GGGTAGAACATATAGTACACAAGTTGT 58.744 37.037 1.64 1.64 42.84 3.32
255 256 5.595542 AGCGGGTAGAACATATAGTACACAA 59.404 40.000 0.00 0.00 0.00 3.33
256 257 5.009310 CAGCGGGTAGAACATATAGTACACA 59.991 44.000 0.00 0.00 0.00 3.72
257 258 5.240183 TCAGCGGGTAGAACATATAGTACAC 59.760 44.000 0.00 0.00 0.00 2.90
258 259 5.379187 TCAGCGGGTAGAACATATAGTACA 58.621 41.667 0.00 0.00 0.00 2.90
259 260 5.954296 TCAGCGGGTAGAACATATAGTAC 57.046 43.478 0.00 0.00 0.00 2.73
260 261 6.571731 GCAATCAGCGGGTAGAACATATAGTA 60.572 42.308 0.00 0.00 0.00 1.82
262 263 4.627467 GCAATCAGCGGGTAGAACATATAG 59.373 45.833 0.00 0.00 0.00 1.31
263 264 4.566004 GCAATCAGCGGGTAGAACATATA 58.434 43.478 0.00 0.00 0.00 0.86
264 265 3.403038 GCAATCAGCGGGTAGAACATAT 58.597 45.455 0.00 0.00 0.00 1.78
265 266 2.833794 GCAATCAGCGGGTAGAACATA 58.166 47.619 0.00 0.00 0.00 2.29
266 267 1.668419 GCAATCAGCGGGTAGAACAT 58.332 50.000 0.00 0.00 0.00 2.71
267 268 3.153024 GCAATCAGCGGGTAGAACA 57.847 52.632 0.00 0.00 0.00 3.18
277 278 2.290641 CCGTAACTATTGGGCAATCAGC 59.709 50.000 0.00 0.00 44.65 4.26
278 279 2.878406 CCCGTAACTATTGGGCAATCAG 59.122 50.000 0.00 0.00 35.82 2.90
279 280 2.925724 CCCGTAACTATTGGGCAATCA 58.074 47.619 0.00 0.00 35.82 2.57
300 301 4.166725 ACCTATATCCATATCCGACGGGTA 59.833 45.833 15.25 12.53 33.83 3.69
301 302 3.053095 ACCTATATCCATATCCGACGGGT 60.053 47.826 15.25 10.11 33.83 5.28
303 304 6.320672 ACTTTACCTATATCCATATCCGACGG 59.679 42.308 7.84 7.84 0.00 4.79
304 305 7.330900 ACTTTACCTATATCCATATCCGACG 57.669 40.000 0.00 0.00 0.00 5.12
305 306 9.583765 GAAACTTTACCTATATCCATATCCGAC 57.416 37.037 0.00 0.00 0.00 4.79
306 307 9.316594 TGAAACTTTACCTATATCCATATCCGA 57.683 33.333 0.00 0.00 0.00 4.55
313 314 9.139734 ACGAGTATGAAACTTTACCTATATCCA 57.860 33.333 0.00 0.00 39.07 3.41
316 317 9.139734 TCCACGAGTATGAAACTTTACCTATAT 57.860 33.333 0.00 0.00 39.07 0.86
317 318 8.408601 GTCCACGAGTATGAAACTTTACCTATA 58.591 37.037 0.00 0.00 39.07 1.31
320 321 5.011329 TGTCCACGAGTATGAAACTTTACCT 59.989 40.000 0.00 0.00 39.07 3.08
322 323 6.149504 GTGTCCACGAGTATGAAACTTTAC 57.850 41.667 0.00 0.00 39.07 2.01
338 339 8.540492 CAAAATTCTATCTATACACGTGTCCAC 58.460 37.037 27.16 0.00 0.00 4.02
339 340 8.255206 ACAAAATTCTATCTATACACGTGTCCA 58.745 33.333 27.16 9.43 0.00 4.02
340 341 8.644318 ACAAAATTCTATCTATACACGTGTCC 57.356 34.615 27.16 0.00 0.00 4.02
385 386 9.160412 GGTAGGGTAGAGCAATATTATATCCAT 57.840 37.037 0.00 0.00 0.00 3.41
386 387 7.567622 GGGTAGGGTAGAGCAATATTATATCCA 59.432 40.741 0.00 0.00 0.00 3.41
387 388 7.567622 TGGGTAGGGTAGAGCAATATTATATCC 59.432 40.741 0.00 0.00 0.00 2.59
388 389 8.548880 TGGGTAGGGTAGAGCAATATTATATC 57.451 38.462 0.00 0.00 0.00 1.63
391 392 9.160412 GATATGGGTAGGGTAGAGCAATATTAT 57.840 37.037 0.00 0.00 0.00 1.28
392 393 7.567622 GGATATGGGTAGGGTAGAGCAATATTA 59.432 40.741 0.00 0.00 0.00 0.98
394 395 5.905913 GGATATGGGTAGGGTAGAGCAATAT 59.094 44.000 0.00 0.00 0.00 1.28
395 396 5.017431 AGGATATGGGTAGGGTAGAGCAATA 59.983 44.000 0.00 0.00 0.00 1.90
396 397 4.104831 GGATATGGGTAGGGTAGAGCAAT 58.895 47.826 0.00 0.00 0.00 3.56
397 398 3.144125 AGGATATGGGTAGGGTAGAGCAA 59.856 47.826 0.00 0.00 0.00 3.91
398 399 2.728013 AGGATATGGGTAGGGTAGAGCA 59.272 50.000 0.00 0.00 0.00 4.26
400 401 4.294168 TGGTAGGATATGGGTAGGGTAGAG 59.706 50.000 0.00 0.00 0.00 2.43
401 402 4.262182 TGGTAGGATATGGGTAGGGTAGA 58.738 47.826 0.00 0.00 0.00 2.59
402 403 4.687262 TGGTAGGATATGGGTAGGGTAG 57.313 50.000 0.00 0.00 0.00 3.18
403 404 5.347124 CAATGGTAGGATATGGGTAGGGTA 58.653 45.833 0.00 0.00 0.00 3.69
404 405 4.175962 CAATGGTAGGATATGGGTAGGGT 58.824 47.826 0.00 0.00 0.00 4.34
405 406 3.054361 GCAATGGTAGGATATGGGTAGGG 60.054 52.174 0.00 0.00 0.00 3.53
406 407 3.054361 GGCAATGGTAGGATATGGGTAGG 60.054 52.174 0.00 0.00 0.00 3.18
408 409 3.603697 TGGCAATGGTAGGATATGGGTA 58.396 45.455 0.00 0.00 0.00 3.69
409 410 2.427872 TGGCAATGGTAGGATATGGGT 58.572 47.619 0.00 0.00 0.00 4.51
411 412 5.178096 TGTATGGCAATGGTAGGATATGG 57.822 43.478 0.00 0.00 0.00 2.74
413 414 6.501805 TCTCTTGTATGGCAATGGTAGGATAT 59.498 38.462 0.00 0.00 36.36 1.63
414 415 5.843969 TCTCTTGTATGGCAATGGTAGGATA 59.156 40.000 0.00 0.00 36.36 2.59
415 416 4.660303 TCTCTTGTATGGCAATGGTAGGAT 59.340 41.667 0.00 0.00 36.36 3.24
416 417 4.037222 TCTCTTGTATGGCAATGGTAGGA 58.963 43.478 0.00 0.00 36.36 2.94
417 418 4.130118 GTCTCTTGTATGGCAATGGTAGG 58.870 47.826 0.00 0.00 36.36 3.18
419 420 4.835284 TGTCTCTTGTATGGCAATGGTA 57.165 40.909 0.00 0.00 36.36 3.25
421 422 3.758023 TGTTGTCTCTTGTATGGCAATGG 59.242 43.478 0.00 0.00 36.36 3.16
423 424 5.072741 ACTTGTTGTCTCTTGTATGGCAAT 58.927 37.500 0.00 0.00 36.36 3.56
425 426 4.085357 ACTTGTTGTCTCTTGTATGGCA 57.915 40.909 0.00 0.00 0.00 4.92
430 431 5.220381 CGAAGCTACTTGTTGTCTCTTGTA 58.780 41.667 0.00 0.00 0.00 2.41
431 432 4.051922 CGAAGCTACTTGTTGTCTCTTGT 58.948 43.478 0.00 0.00 0.00 3.16
432 433 4.637574 CGAAGCTACTTGTTGTCTCTTG 57.362 45.455 0.00 0.00 0.00 3.02
540 4950 0.690192 TCTGGCTCGTGGAATTTCCA 59.310 50.000 14.24 14.24 45.98 3.53
675 5095 0.826062 GGTTGCTTGCCAGCCATATT 59.174 50.000 7.41 0.00 46.74 1.28
729 5149 2.709125 CTTGTTCGCTGGACCGTGGA 62.709 60.000 0.00 0.00 0.00 4.02
788 5208 1.150308 TGCCAAGTGCCAAGTGCTA 59.850 52.632 0.00 0.00 42.00 3.49
900 5323 2.398036 GCGCAATACACGTTCGGG 59.602 61.111 0.30 0.00 0.00 5.14
945 5369 6.973474 ACACTACTCGTCTCTTTATATGCAAC 59.027 38.462 0.00 0.00 0.00 4.17
1000 5469 5.252586 AGGATATCTGGCTGTATTTGCAT 57.747 39.130 2.05 0.00 0.00 3.96
1011 5480 5.247110 TGGATTGTTCTCTAGGATATCTGGC 59.753 44.000 2.05 0.00 0.00 4.85
1021 5490 4.553756 TCGATCGTGGATTGTTCTCTAG 57.446 45.455 15.94 0.00 0.00 2.43
1024 5493 2.797156 CCATCGATCGTGGATTGTTCTC 59.203 50.000 23.87 0.00 39.12 2.87
1026 5495 1.261619 GCCATCGATCGTGGATTGTTC 59.738 52.381 29.10 13.85 39.12 3.18
1034 5503 1.420641 TTGCTTCGCCATCGATCGTG 61.421 55.000 15.94 12.28 45.04 4.35
1178 5673 9.904647 GTGCATTAAATAATTTTGCATGTACAG 57.095 29.630 0.33 0.00 35.22 2.74
1262 5945 3.619038 CAGGATGAGTTAGCGAACCTTTC 59.381 47.826 6.04 0.00 39.69 2.62
1318 6007 4.142038 TCTCGATCGAATAGGATCAACCA 58.858 43.478 19.92 0.00 42.35 3.67
1319 6008 4.456222 TCTCTCGATCGAATAGGATCAACC 59.544 45.833 19.92 0.00 42.35 3.77
1341 6035 4.742167 CGTGTCATGGTAGAGAATGTGATC 59.258 45.833 0.00 0.00 0.00 2.92
1342 6036 4.686972 CGTGTCATGGTAGAGAATGTGAT 58.313 43.478 0.00 0.00 0.00 3.06
1352 6049 0.389296 TCCGTTGCGTGTCATGGTAG 60.389 55.000 0.00 0.00 0.00 3.18
1357 6054 0.249699 TCAGTTCCGTTGCGTGTCAT 60.250 50.000 0.00 0.00 0.00 3.06
1361 6058 2.399396 AAAATCAGTTCCGTTGCGTG 57.601 45.000 0.00 0.00 0.00 5.34
1387 6084 5.313520 TGTTATTACGATCGAACAGTCCA 57.686 39.130 24.34 7.00 0.00 4.02
1388 6085 4.738740 CCTGTTATTACGATCGAACAGTCC 59.261 45.833 29.90 13.33 44.71 3.85
1403 6102 2.917713 TGGAATGCACCCCTGTTATT 57.082 45.000 7.61 0.00 0.00 1.40
1404 6103 2.749466 CGATGGAATGCACCCCTGTTAT 60.749 50.000 7.61 0.00 0.00 1.89
1418 6117 2.032634 GTTGCAGACGCCGATGGAA 61.033 57.895 0.00 0.00 37.32 3.53
1694 6393 1.078759 CGCTGTCCATGACCTCGTTC 61.079 60.000 0.00 0.00 0.00 3.95
1970 6669 0.736325 CGAAGGTGGCGTAGTTGAGG 60.736 60.000 0.00 0.00 0.00 3.86
2024 6726 2.696526 AGAGGTTGGTGTAGGTCAGA 57.303 50.000 0.00 0.00 0.00 3.27
2760 7488 9.853177 TCAATCCTCTTCTTTTCTTCTTTTACT 57.147 29.630 0.00 0.00 0.00 2.24
2765 7493 8.801299 GGAAATCAATCCTCTTCTTTTCTTCTT 58.199 33.333 0.00 0.00 36.50 2.52
2766 7494 7.946776 TGGAAATCAATCCTCTTCTTTTCTTCT 59.053 33.333 0.00 0.00 40.35 2.85
2767 7495 8.026026 GTGGAAATCAATCCTCTTCTTTTCTTC 58.974 37.037 0.00 0.00 40.35 2.87
2768 7496 7.727634 AGTGGAAATCAATCCTCTTCTTTTCTT 59.272 33.333 0.00 0.00 39.64 2.52
2769 7497 7.237255 AGTGGAAATCAATCCTCTTCTTTTCT 58.763 34.615 0.00 0.00 39.64 2.52
2770 7498 7.459795 AGTGGAAATCAATCCTCTTCTTTTC 57.540 36.000 0.00 0.00 39.64 2.29
2771 7499 7.846101 AAGTGGAAATCAATCCTCTTCTTTT 57.154 32.000 5.15 0.00 45.51 2.27
2777 7505 6.627087 TGTAGAAGTGGAAATCAATCCTCT 57.373 37.500 0.00 0.00 43.36 3.69
2778 7506 6.484977 GGATGTAGAAGTGGAAATCAATCCTC 59.515 42.308 0.00 0.00 40.35 3.71
2779 7507 6.360618 GGATGTAGAAGTGGAAATCAATCCT 58.639 40.000 0.00 0.00 40.35 3.24
2780 7508 5.532779 GGGATGTAGAAGTGGAAATCAATCC 59.467 44.000 0.00 0.00 40.10 3.01
2781 7509 6.122277 TGGGATGTAGAAGTGGAAATCAATC 58.878 40.000 0.00 0.00 0.00 2.67
2782 7510 6.078456 TGGGATGTAGAAGTGGAAATCAAT 57.922 37.500 0.00 0.00 0.00 2.57
2783 7511 5.512942 TGGGATGTAGAAGTGGAAATCAA 57.487 39.130 0.00 0.00 0.00 2.57
2784 7512 5.715439 ATGGGATGTAGAAGTGGAAATCA 57.285 39.130 0.00 0.00 0.00 2.57
2785 7513 8.697507 AAATATGGGATGTAGAAGTGGAAATC 57.302 34.615 0.00 0.00 0.00 2.17
2787 7515 9.403583 GTAAAATATGGGATGTAGAAGTGGAAA 57.596 33.333 0.00 0.00 0.00 3.13
2788 7516 8.778059 AGTAAAATATGGGATGTAGAAGTGGAA 58.222 33.333 0.00 0.00 0.00 3.53
2789 7517 8.331931 AGTAAAATATGGGATGTAGAAGTGGA 57.668 34.615 0.00 0.00 0.00 4.02
2790 7518 8.432805 AGAGTAAAATATGGGATGTAGAAGTGG 58.567 37.037 0.00 0.00 0.00 4.00
2791 7519 9.482627 GAGAGTAAAATATGGGATGTAGAAGTG 57.517 37.037 0.00 0.00 0.00 3.16
2792 7520 9.213777 TGAGAGTAAAATATGGGATGTAGAAGT 57.786 33.333 0.00 0.00 0.00 3.01
2801 7529 9.308000 ACACAAAATTGAGAGTAAAATATGGGA 57.692 29.630 0.00 0.00 0.00 4.37
2802 7530 9.573133 GACACAAAATTGAGAGTAAAATATGGG 57.427 33.333 0.00 0.00 0.00 4.00
2803 7531 9.573133 GGACACAAAATTGAGAGTAAAATATGG 57.427 33.333 0.00 0.00 0.00 2.74
2808 7536 9.883142 AAAATGGACACAAAATTGAGAGTAAAA 57.117 25.926 0.00 0.00 0.00 1.52
2809 7537 9.311916 CAAAATGGACACAAAATTGAGAGTAAA 57.688 29.630 0.00 0.00 0.00 2.01
2810 7538 7.437862 GCAAAATGGACACAAAATTGAGAGTAA 59.562 33.333 0.00 0.00 0.00 2.24
2811 7539 6.922957 GCAAAATGGACACAAAATTGAGAGTA 59.077 34.615 0.00 0.00 0.00 2.59
2812 7540 5.754890 GCAAAATGGACACAAAATTGAGAGT 59.245 36.000 0.00 0.00 0.00 3.24
2813 7541 5.178067 GGCAAAATGGACACAAAATTGAGAG 59.822 40.000 0.00 0.00 0.00 3.20
2814 7542 5.055812 GGCAAAATGGACACAAAATTGAGA 58.944 37.500 0.00 0.00 0.00 3.27
2815 7543 4.213906 GGGCAAAATGGACACAAAATTGAG 59.786 41.667 0.00 0.00 0.00 3.02
2816 7544 4.133078 GGGCAAAATGGACACAAAATTGA 58.867 39.130 0.00 0.00 0.00 2.57
2817 7545 3.252944 GGGGCAAAATGGACACAAAATTG 59.747 43.478 0.00 0.00 0.00 2.32
2818 7546 3.117738 TGGGGCAAAATGGACACAAAATT 60.118 39.130 0.00 0.00 0.00 1.82
2819 7547 2.441001 TGGGGCAAAATGGACACAAAAT 59.559 40.909 0.00 0.00 0.00 1.82
2820 7548 1.839994 TGGGGCAAAATGGACACAAAA 59.160 42.857 0.00 0.00 0.00 2.44
2821 7549 1.500474 TGGGGCAAAATGGACACAAA 58.500 45.000 0.00 0.00 0.00 2.83
2822 7550 1.727062 ATGGGGCAAAATGGACACAA 58.273 45.000 0.00 0.00 0.00 3.33
2823 7551 1.622811 GAATGGGGCAAAATGGACACA 59.377 47.619 0.00 0.00 0.00 3.72
2824 7552 1.901833 AGAATGGGGCAAAATGGACAC 59.098 47.619 0.00 0.00 0.00 3.67
2825 7553 2.178580 GAGAATGGGGCAAAATGGACA 58.821 47.619 0.00 0.00 0.00 4.02
2826 7554 1.482182 GGAGAATGGGGCAAAATGGAC 59.518 52.381 0.00 0.00 0.00 4.02
2827 7555 1.362237 AGGAGAATGGGGCAAAATGGA 59.638 47.619 0.00 0.00 0.00 3.41
2828 7556 1.870064 AGGAGAATGGGGCAAAATGG 58.130 50.000 0.00 0.00 0.00 3.16
2829 7557 3.635591 ACTAGGAGAATGGGGCAAAATG 58.364 45.455 0.00 0.00 0.00 2.32
2830 7558 4.686122 CGTACTAGGAGAATGGGGCAAAAT 60.686 45.833 0.00 0.00 0.00 1.82
2831 7559 3.370103 CGTACTAGGAGAATGGGGCAAAA 60.370 47.826 0.00 0.00 0.00 2.44
2832 7560 2.169769 CGTACTAGGAGAATGGGGCAAA 59.830 50.000 0.00 0.00 0.00 3.68
2833 7561 1.760613 CGTACTAGGAGAATGGGGCAA 59.239 52.381 0.00 0.00 0.00 4.52
2834 7562 1.410004 CGTACTAGGAGAATGGGGCA 58.590 55.000 0.00 0.00 0.00 5.36
2835 7563 0.680061 CCGTACTAGGAGAATGGGGC 59.320 60.000 0.00 0.00 0.00 5.80
2836 7564 1.339097 CCCGTACTAGGAGAATGGGG 58.661 60.000 0.00 0.00 0.00 4.96
2837 7565 0.680061 GCCCGTACTAGGAGAATGGG 59.320 60.000 3.11 8.75 38.23 4.00
2838 7566 0.680061 GGCCCGTACTAGGAGAATGG 59.320 60.000 0.00 0.00 0.00 3.16
2839 7567 0.680061 GGGCCCGTACTAGGAGAATG 59.320 60.000 5.69 0.00 0.00 2.67
2840 7568 0.263765 TGGGCCCGTACTAGGAGAAT 59.736 55.000 19.37 0.00 0.00 2.40
2841 7569 0.685458 GTGGGCCCGTACTAGGAGAA 60.685 60.000 19.37 0.00 0.00 2.87
2842 7570 1.076485 GTGGGCCCGTACTAGGAGA 60.076 63.158 19.37 0.00 0.00 3.71
2843 7571 2.132352 GGTGGGCCCGTACTAGGAG 61.132 68.421 19.37 0.00 0.00 3.69
2844 7572 2.042639 GGTGGGCCCGTACTAGGA 60.043 66.667 19.37 0.00 0.00 2.94
2845 7573 3.159347 GGGTGGGCCCGTACTAGG 61.159 72.222 19.37 0.00 46.51 3.02
2862 7590 3.697747 TACCGTCCAGTTGGCCCG 61.698 66.667 0.00 0.00 34.44 6.13
2863 7591 2.046604 GTACCGTCCAGTTGGCCC 60.047 66.667 0.00 0.00 34.44 5.80
2864 7592 0.250597 AAAGTACCGTCCAGTTGGCC 60.251 55.000 0.00 0.00 34.44 5.36
2865 7593 1.601166 AAAAGTACCGTCCAGTTGGC 58.399 50.000 0.00 0.00 34.44 4.52
2866 7594 5.952526 AATTAAAAGTACCGTCCAGTTGG 57.047 39.130 0.00 0.00 0.00 3.77
2867 7595 8.562052 AGTTAAATTAAAAGTACCGTCCAGTTG 58.438 33.333 0.00 0.00 0.00 3.16
2868 7596 8.562052 CAGTTAAATTAAAAGTACCGTCCAGTT 58.438 33.333 0.00 0.00 0.00 3.16
2869 7597 7.933033 TCAGTTAAATTAAAAGTACCGTCCAGT 59.067 33.333 0.00 0.00 0.00 4.00
2870 7598 8.314143 TCAGTTAAATTAAAAGTACCGTCCAG 57.686 34.615 0.00 0.00 0.00 3.86
2871 7599 7.095102 GCTCAGTTAAATTAAAAGTACCGTCCA 60.095 37.037 0.00 0.00 0.00 4.02
2872 7600 7.118825 AGCTCAGTTAAATTAAAAGTACCGTCC 59.881 37.037 0.00 0.00 0.00 4.79
2873 7601 7.955864 CAGCTCAGTTAAATTAAAAGTACCGTC 59.044 37.037 0.00 0.00 0.00 4.79
2874 7602 7.443272 ACAGCTCAGTTAAATTAAAAGTACCGT 59.557 33.333 0.00 0.00 0.00 4.83
2875 7603 7.803724 ACAGCTCAGTTAAATTAAAAGTACCG 58.196 34.615 0.00 0.00 0.00 4.02
2876 7604 9.961265 AAACAGCTCAGTTAAATTAAAAGTACC 57.039 29.630 0.00 0.00 0.00 3.34
2903 7631 9.898152 AATCCAACAACCAAAGAGAAATAAAAA 57.102 25.926 0.00 0.00 0.00 1.94
2904 7632 9.898152 AAATCCAACAACCAAAGAGAAATAAAA 57.102 25.926 0.00 0.00 0.00 1.52
2905 7633 9.898152 AAAATCCAACAACCAAAGAGAAATAAA 57.102 25.926 0.00 0.00 0.00 1.40
2906 7634 9.898152 AAAAATCCAACAACCAAAGAGAAATAA 57.102 25.926 0.00 0.00 0.00 1.40
2929 7657 6.334102 AGGTTGATATTTGGCACGTAAAAA 57.666 33.333 0.00 0.00 0.00 1.94
2930 7658 5.968528 AGGTTGATATTTGGCACGTAAAA 57.031 34.783 0.00 0.00 0.00 1.52
2931 7659 7.633193 AATAGGTTGATATTTGGCACGTAAA 57.367 32.000 0.00 0.00 0.00 2.01
2932 7660 8.734218 TTAATAGGTTGATATTTGGCACGTAA 57.266 30.769 0.00 0.00 0.00 3.18
2933 7661 8.734218 TTTAATAGGTTGATATTTGGCACGTA 57.266 30.769 0.00 0.00 0.00 3.57
2934 7662 7.633193 TTTAATAGGTTGATATTTGGCACGT 57.367 32.000 0.00 0.00 0.00 4.49
2935 7663 8.918961 TTTTTAATAGGTTGATATTTGGCACG 57.081 30.769 0.00 0.00 0.00 5.34
3016 7744 9.479549 ACCTCTTTGTAATGGATAATGAACAAT 57.520 29.630 0.00 0.00 29.66 2.71
3017 7745 8.877864 ACCTCTTTGTAATGGATAATGAACAA 57.122 30.769 0.00 0.00 0.00 2.83
3018 7746 8.877864 AACCTCTTTGTAATGGATAATGAACA 57.122 30.769 0.00 0.00 0.00 3.18
3019 7747 8.956426 TGAACCTCTTTGTAATGGATAATGAAC 58.044 33.333 0.00 0.00 0.00 3.18
3020 7748 9.699410 ATGAACCTCTTTGTAATGGATAATGAA 57.301 29.630 0.00 0.00 0.00 2.57
3021 7749 9.342308 GATGAACCTCTTTGTAATGGATAATGA 57.658 33.333 0.00 0.00 0.00 2.57
3022 7750 9.123902 TGATGAACCTCTTTGTAATGGATAATG 57.876 33.333 0.00 0.00 0.00 1.90
3023 7751 9.872684 ATGATGAACCTCTTTGTAATGGATAAT 57.127 29.630 0.00 0.00 0.00 1.28
3024 7752 9.123902 CATGATGAACCTCTTTGTAATGGATAA 57.876 33.333 0.00 0.00 0.00 1.75
3025 7753 8.274322 ACATGATGAACCTCTTTGTAATGGATA 58.726 33.333 0.00 0.00 0.00 2.59
3026 7754 7.121382 ACATGATGAACCTCTTTGTAATGGAT 58.879 34.615 0.00 0.00 0.00 3.41
3027 7755 6.484288 ACATGATGAACCTCTTTGTAATGGA 58.516 36.000 0.00 0.00 0.00 3.41
3028 7756 6.764308 ACATGATGAACCTCTTTGTAATGG 57.236 37.500 0.00 0.00 0.00 3.16
3029 7757 9.480053 AAAAACATGATGAACCTCTTTGTAATG 57.520 29.630 0.00 0.00 0.00 1.90
3030 7758 9.696917 GAAAAACATGATGAACCTCTTTGTAAT 57.303 29.630 0.00 0.00 0.00 1.89
3031 7759 7.860373 CGAAAAACATGATGAACCTCTTTGTAA 59.140 33.333 0.00 0.00 0.00 2.41
3032 7760 7.359595 CGAAAAACATGATGAACCTCTTTGTA 58.640 34.615 0.00 0.00 0.00 2.41
3033 7761 6.208644 CGAAAAACATGATGAACCTCTTTGT 58.791 36.000 0.00 0.00 0.00 2.83
3034 7762 5.117592 GCGAAAAACATGATGAACCTCTTTG 59.882 40.000 0.00 0.00 0.00 2.77
3035 7763 5.221224 TGCGAAAAACATGATGAACCTCTTT 60.221 36.000 0.00 0.00 0.00 2.52
3036 7764 4.278170 TGCGAAAAACATGATGAACCTCTT 59.722 37.500 0.00 0.00 0.00 2.85
3037 7765 3.820467 TGCGAAAAACATGATGAACCTCT 59.180 39.130 0.00 0.00 0.00 3.69
3038 7766 4.159377 TGCGAAAAACATGATGAACCTC 57.841 40.909 0.00 0.00 0.00 3.85
3039 7767 4.582701 TTGCGAAAAACATGATGAACCT 57.417 36.364 0.00 0.00 0.00 3.50
3040 7768 5.649602 TTTTGCGAAAAACATGATGAACC 57.350 34.783 0.00 0.00 0.00 3.62
3061 7789 5.828299 TCAAACACGATGAACCTCTTTTT 57.172 34.783 0.00 0.00 0.00 1.94
3062 7790 5.828299 TTCAAACACGATGAACCTCTTTT 57.172 34.783 0.00 0.00 32.10 2.27
3063 7791 5.299279 ACATTCAAACACGATGAACCTCTTT 59.701 36.000 0.00 0.00 39.43 2.52
3064 7792 4.821805 ACATTCAAACACGATGAACCTCTT 59.178 37.500 0.00 0.00 39.43 2.85
3065 7793 4.389374 ACATTCAAACACGATGAACCTCT 58.611 39.130 0.00 0.00 39.43 3.69
3066 7794 4.749245 ACATTCAAACACGATGAACCTC 57.251 40.909 0.00 0.00 39.43 3.85
3067 7795 7.915293 TTATACATTCAAACACGATGAACCT 57.085 32.000 0.00 0.00 39.43 3.50
3068 7796 8.958175 TTTTATACATTCAAACACGATGAACC 57.042 30.769 0.00 0.00 39.43 3.62
3113 7841 9.556030 TTGTTCTTTGTTTTTGTTTTCGTTTTT 57.444 22.222 0.00 0.00 0.00 1.94
3114 7842 9.556030 TTTGTTCTTTGTTTTTGTTTTCGTTTT 57.444 22.222 0.00 0.00 0.00 2.43
3115 7843 9.556030 TTTTGTTCTTTGTTTTTGTTTTCGTTT 57.444 22.222 0.00 0.00 0.00 3.60
3116 7844 9.556030 TTTTTGTTCTTTGTTTTTGTTTTCGTT 57.444 22.222 0.00 0.00 0.00 3.85
3146 7874 9.508642 TTCTGGTTTTTGTTGGTTTTCTATTTT 57.491 25.926 0.00 0.00 0.00 1.82
3147 7875 9.679661 ATTCTGGTTTTTGTTGGTTTTCTATTT 57.320 25.926 0.00 0.00 0.00 1.40
3151 7879 9.508642 TTTTATTCTGGTTTTTGTTGGTTTTCT 57.491 25.926 0.00 0.00 0.00 2.52
3175 7903 9.516314 CAAACGGTTTTCTTCTCTCTTTAATTT 57.484 29.630 2.79 0.00 0.00 1.82
3176 7904 8.899771 TCAAACGGTTTTCTTCTCTCTTTAATT 58.100 29.630 2.79 0.00 0.00 1.40
3177 7905 8.446599 TCAAACGGTTTTCTTCTCTCTTTAAT 57.553 30.769 2.79 0.00 0.00 1.40
3178 7906 7.852971 TCAAACGGTTTTCTTCTCTCTTTAA 57.147 32.000 2.79 0.00 0.00 1.52
3179 7907 7.852971 TTCAAACGGTTTTCTTCTCTCTTTA 57.147 32.000 2.79 0.00 0.00 1.85
3180 7908 6.753107 TTCAAACGGTTTTCTTCTCTCTTT 57.247 33.333 2.79 0.00 0.00 2.52
3181 7909 6.753107 TTTCAAACGGTTTTCTTCTCTCTT 57.247 33.333 2.79 0.00 0.00 2.85
3182 7910 6.753107 TTTTCAAACGGTTTTCTTCTCTCT 57.247 33.333 2.79 0.00 0.00 3.10
3183 7911 8.343366 AGTATTTTCAAACGGTTTTCTTCTCTC 58.657 33.333 2.79 0.00 0.00 3.20
3184 7912 8.221965 AGTATTTTCAAACGGTTTTCTTCTCT 57.778 30.769 2.79 0.00 0.00 3.10
3185 7913 9.595357 CTAGTATTTTCAAACGGTTTTCTTCTC 57.405 33.333 2.79 0.00 0.00 2.87
3186 7914 8.074370 GCTAGTATTTTCAAACGGTTTTCTTCT 58.926 33.333 2.79 0.24 0.00 2.85
3187 7915 7.858879 TGCTAGTATTTTCAAACGGTTTTCTTC 59.141 33.333 2.79 0.00 0.00 2.87
3188 7916 7.646526 GTGCTAGTATTTTCAAACGGTTTTCTT 59.353 33.333 2.79 0.00 0.00 2.52
3189 7917 7.136772 GTGCTAGTATTTTCAAACGGTTTTCT 58.863 34.615 2.79 0.00 0.00 2.52
3190 7918 6.913673 TGTGCTAGTATTTTCAAACGGTTTTC 59.086 34.615 2.79 0.00 0.00 2.29
3191 7919 6.797454 TGTGCTAGTATTTTCAAACGGTTTT 58.203 32.000 2.79 0.00 0.00 2.43
3192 7920 6.380095 TGTGCTAGTATTTTCAAACGGTTT 57.620 33.333 0.00 0.00 0.00 3.27
3193 7921 6.569179 ATGTGCTAGTATTTTCAAACGGTT 57.431 33.333 0.00 0.00 0.00 4.44
3194 7922 7.693952 CATATGTGCTAGTATTTTCAAACGGT 58.306 34.615 0.00 0.00 0.00 4.83
3213 7941 0.607762 TGCAACACACGGGCATATGT 60.608 50.000 4.29 0.00 31.58 2.29
3214 7942 0.525311 TTGCAACACACGGGCATATG 59.475 50.000 0.00 0.00 37.39 1.78
3215 7943 0.525761 GTTGCAACACACGGGCATAT 59.474 50.000 24.52 0.00 37.39 1.78
3216 7944 1.846849 CGTTGCAACACACGGGCATA 61.847 55.000 28.01 0.00 37.39 3.14
3217 7945 2.727544 GTTGCAACACACGGGCAT 59.272 55.556 24.52 0.00 37.39 4.40
3218 7946 3.882013 CGTTGCAACACACGGGCA 61.882 61.111 28.01 0.00 35.41 5.36
3219 7947 4.622456 CCGTTGCAACACACGGGC 62.622 66.667 28.01 0.00 38.50 6.13
3220 7948 1.994507 TTTCCGTTGCAACACACGGG 61.995 55.000 28.01 19.95 40.87 5.28
3221 7949 0.179161 TTTTCCGTTGCAACACACGG 60.179 50.000 28.01 23.60 41.45 4.94
3222 7950 1.187715 CTTTTCCGTTGCAACACACG 58.812 50.000 28.01 15.55 0.00 4.49
3223 7951 2.553079 TCTTTTCCGTTGCAACACAC 57.447 45.000 28.01 3.05 0.00 3.82
3224 7952 3.577649 TTTCTTTTCCGTTGCAACACA 57.422 38.095 28.01 11.65 0.00 3.72
3225 7953 5.463499 AAATTTCTTTTCCGTTGCAACAC 57.537 34.783 28.01 4.26 0.00 3.32
3226 7954 5.230306 CGTAAATTTCTTTTCCGTTGCAACA 59.770 36.000 28.01 7.99 0.00 3.33
3227 7955 5.331980 CCGTAAATTTCTTTTCCGTTGCAAC 60.332 40.000 19.89 19.89 0.00 4.17
3228 7956 4.740695 CCGTAAATTTCTTTTCCGTTGCAA 59.259 37.500 0.00 0.00 0.00 4.08
3229 7957 4.202030 ACCGTAAATTTCTTTTCCGTTGCA 60.202 37.500 0.00 0.00 0.00 4.08
3230 7958 4.292599 ACCGTAAATTTCTTTTCCGTTGC 58.707 39.130 0.00 0.00 0.00 4.17
3231 7959 7.592164 ACATAACCGTAAATTTCTTTTCCGTTG 59.408 33.333 0.00 0.00 0.00 4.10
3232 7960 7.592164 CACATAACCGTAAATTTCTTTTCCGTT 59.408 33.333 0.00 0.00 0.00 4.44
3233 7961 7.079475 CACATAACCGTAAATTTCTTTTCCGT 58.921 34.615 0.00 0.00 0.00 4.69
3234 7962 6.033091 GCACATAACCGTAAATTTCTTTTCCG 59.967 38.462 0.00 0.00 0.00 4.30
3235 7963 6.864165 TGCACATAACCGTAAATTTCTTTTCC 59.136 34.615 0.00 0.00 0.00 3.13
3236 7964 7.861176 TGCACATAACCGTAAATTTCTTTTC 57.139 32.000 0.00 0.00 0.00 2.29
3237 7965 8.825667 ATTGCACATAACCGTAAATTTCTTTT 57.174 26.923 0.00 0.00 0.00 2.27
3238 7966 8.085296 TGATTGCACATAACCGTAAATTTCTTT 58.915 29.630 0.00 0.00 0.00 2.52
3239 7967 7.540745 GTGATTGCACATAACCGTAAATTTCTT 59.459 33.333 0.00 0.00 44.51 2.52
3240 7968 7.027161 GTGATTGCACATAACCGTAAATTTCT 58.973 34.615 0.00 0.00 44.51 2.52
3241 7969 7.204737 GTGATTGCACATAACCGTAAATTTC 57.795 36.000 0.00 0.00 44.51 2.17
3256 7984 3.173599 CGATGAACCATTGTGATTGCAC 58.826 45.455 0.00 0.00 45.35 4.57
3257 7985 2.819019 ACGATGAACCATTGTGATTGCA 59.181 40.909 0.00 0.00 37.13 4.08
3258 7986 3.492421 ACGATGAACCATTGTGATTGC 57.508 42.857 0.00 0.00 37.13 3.56
3264 7992 5.545658 GTGTATTCACGATGAACCATTGT 57.454 39.130 0.00 0.00 39.45 2.71
3277 8005 6.648725 AGCGTTTCTTCATAGTGTATTCAC 57.351 37.500 0.00 0.00 44.15 3.18
3278 8006 7.544622 ACTAGCGTTTCTTCATAGTGTATTCA 58.455 34.615 0.00 0.00 0.00 2.57
3279 8007 7.988904 ACTAGCGTTTCTTCATAGTGTATTC 57.011 36.000 0.00 0.00 0.00 1.75
3280 8008 7.817962 ACAACTAGCGTTTCTTCATAGTGTATT 59.182 33.333 0.00 0.00 0.00 1.89
3281 8009 7.321153 ACAACTAGCGTTTCTTCATAGTGTAT 58.679 34.615 0.00 0.00 0.00 2.29
3282 8010 6.684686 ACAACTAGCGTTTCTTCATAGTGTA 58.315 36.000 0.00 0.00 0.00 2.90
3283 8011 5.539048 ACAACTAGCGTTTCTTCATAGTGT 58.461 37.500 0.00 0.00 0.00 3.55
3284 8012 6.401153 GGAACAACTAGCGTTTCTTCATAGTG 60.401 42.308 0.10 0.00 0.00 2.74
3285 8013 5.638234 GGAACAACTAGCGTTTCTTCATAGT 59.362 40.000 0.10 0.00 0.00 2.12
3286 8014 5.637810 TGGAACAACTAGCGTTTCTTCATAG 59.362 40.000 5.71 0.00 31.92 2.23
3287 8015 5.407387 GTGGAACAACTAGCGTTTCTTCATA 59.593 40.000 5.71 0.00 44.16 2.15
3288 8016 4.213482 GTGGAACAACTAGCGTTTCTTCAT 59.787 41.667 5.71 0.00 44.16 2.57
3289 8017 3.558418 GTGGAACAACTAGCGTTTCTTCA 59.442 43.478 5.71 0.00 44.16 3.02
3290 8018 3.059120 GGTGGAACAACTAGCGTTTCTTC 60.059 47.826 5.71 0.67 46.61 2.87
3291 8019 2.876550 GGTGGAACAACTAGCGTTTCTT 59.123 45.455 5.71 0.00 46.61 2.52
3292 8020 2.490991 GGTGGAACAACTAGCGTTTCT 58.509 47.619 5.71 0.00 46.61 2.52
3293 8021 2.963498 GGTGGAACAACTAGCGTTTC 57.037 50.000 0.10 0.00 46.61 2.78
3303 8031 5.856156 TCTTTCAATACGTAGGTGGAACAA 58.144 37.500 0.08 0.00 44.16 2.83
3304 8032 5.471556 TCTTTCAATACGTAGGTGGAACA 57.528 39.130 0.08 0.00 39.98 3.18
3305 8033 6.596703 GTTTCTTTCAATACGTAGGTGGAAC 58.403 40.000 0.08 0.00 0.00 3.62
3306 8034 5.406175 CGTTTCTTTCAATACGTAGGTGGAA 59.594 40.000 0.08 2.15 0.00 3.53
3307 8035 4.925054 CGTTTCTTTCAATACGTAGGTGGA 59.075 41.667 0.08 0.00 0.00 4.02
3308 8036 4.435121 GCGTTTCTTTCAATACGTAGGTGG 60.435 45.833 0.08 0.00 36.45 4.61
3309 8037 4.387862 AGCGTTTCTTTCAATACGTAGGTG 59.612 41.667 0.08 1.95 36.45 4.00
3310 8038 4.387862 CAGCGTTTCTTTCAATACGTAGGT 59.612 41.667 0.08 0.00 36.45 3.08
3311 8039 4.624024 TCAGCGTTTCTTTCAATACGTAGG 59.376 41.667 0.08 0.00 36.45 3.18
3312 8040 5.756950 TCAGCGTTTCTTTCAATACGTAG 57.243 39.130 0.08 0.00 36.45 3.51
3313 8041 6.530567 CAATCAGCGTTTCTTTCAATACGTA 58.469 36.000 0.00 0.00 36.45 3.57
3314 8042 5.382303 CAATCAGCGTTTCTTTCAATACGT 58.618 37.500 0.00 0.00 36.45 3.57
3315 8043 4.260656 GCAATCAGCGTTTCTTTCAATACG 59.739 41.667 0.00 0.00 37.09 3.06
3316 8044 5.671093 GCAATCAGCGTTTCTTTCAATAC 57.329 39.130 0.00 0.00 0.00 1.89
3330 8058 1.818555 GGTGAATGGGGCAATCAGC 59.181 57.895 0.00 0.00 44.65 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.