AutoCloner

Multiple sequence alignment - TraesCS3A01G480100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS3A01G480100	chr3A	100.000	3605	0	0	1	3605	711254859	711251255	0.000000e+00	6658.0
1	TraesCS3A01G480100	chr3A	90.574	1761	128	20	912	2657	711115264	711117001	0.000000e+00	2298.0
2	TraesCS3A01G480100	chr3A	84.937	478	50	12	3072	3533	593576747	593576276	7.050000e-127	464.0
3	TraesCS3A01G480100	chr3A	83.036	112	16	3	461	571	616722377	616722486	8.240000e-17	99.0
4	TraesCS3A01G480100	chr3B	94.298	1666	86	3	905	2567	766636841	766635182	0.000000e+00	2542.0
5	TraesCS3A01G480100	chr3B	89.101	1725	152	18	945	2657	766593081	766594781	0.000000e+00	2111.0
6	TraesCS3A01G480100	chr3B	85.335	791	114	2	1030	1819	795194457	795193668	0.000000e+00	817.0
7	TraesCS3A01G480100	chr3B	87.054	448	42	9	3092	3526	596043185	596043629	3.230000e-135	492.0
8	TraesCS3A01G480100	chr3B	91.111	45	3	1	2625	2669	766635183	766635140	3.890000e-05	60.2
9	TraesCS3A01G480100	chr5A	89.653	1527	149	4	1030	2556	674371400	674372917	0.000000e+00	1936.0
10	TraesCS3A01G480100	chr5A	88.260	477	38	7	3069	3528	601142672	601143147	4.070000e-154	555.0
11	TraesCS3A01G480100	chr5A	83.678	435	56	11	2692	3116	368972380	368971951	2.610000e-106	396.0
12	TraesCS3A01G480100	chr5A	85.053	281	31	9	2860	3133	602793113	602792837	3.550000e-70	276.0
13	TraesCS3A01G480100	chr5A	84.643	280	32	9	2861	3133	602816771	602816496	5.930000e-68	268.0
14	TraesCS3A01G480100	chr5A	86.829	205	25	1	2653	2855	89031799	89031595	1.010000e-55	228.0
15	TraesCS3A01G480100	chr5A	88.021	192	21	1	2663	2852	582977241	582977432	3.620000e-55	226.0
16	TraesCS3A01G480100	chr5A	87.500	72	7	2	3524	3594	414513848	414513918	8.300000e-12	82.4
17	TraesCS3A01G480100	chr5A	85.915	71	10	0	3520	3590	582850168	582850098	3.860000e-10	76.8
18	TraesCS3A01G480100	chr4D	89.653	1527	146	6	1035	2558	494850555	494852072	0.000000e+00	1934.0
19	TraesCS3A01G480100	chr4D	74.226	1389	294	51	1175	2531	494877298	494878654	1.150000e-144	523.0
20	TraesCS3A01G480100	chr4D	90.909	66	6	0	3524	3589	333050573	333050638	4.960000e-14	89.8
21	TraesCS3A01G480100	chr4B	87.914	1630	160	21	940	2558	634727810	634726207	0.000000e+00	1884.0
22	TraesCS3A01G480100	chr4B	88.671	1527	158	7	1035	2558	634764852	634766366	0.000000e+00	1847.0
23	TraesCS3A01G480100	chr4B	93.902	164	10	0	2692	2855	347386197	347386034	7.730000e-62	248.0
24	TraesCS3A01G480100	chr3D	91.372	1217	96	3	1392	2602	575631706	575632919	0.000000e+00	1657.0
25	TraesCS3A01G480100	chr3D	93.744	1087	58	5	1574	2654	575733644	575732562	0.000000e+00	1622.0
26	TraesCS3A01G480100	chr3D	94.906	373	19	0	1161	1533	575734014	575733642	5.190000e-163	584.0
27	TraesCS3A01G480100	chr3D	90.888	428	31	4	926	1352	575631285	575631705	5.220000e-158	568.0
28	TraesCS3A01G480100	chr3D	81.557	591	54	20	620	1198	575734561	575734014	1.540000e-118	436.0
29	TraesCS3A01G480100	chr3D	84.286	280	34	9	2860	3134	448123899	448123625	7.670000e-67	265.0
30	TraesCS3A01G480100	chr1A	91.716	845	49	8	2692	3524	2764930	2765765	0.000000e+00	1153.0
31	TraesCS3A01G480100	chr1A	86.260	262	27	7	2860	3116	219298209	219298466	3.550000e-70	276.0
32	TraesCS3A01G480100	chr1A	88.764	89	9	1	7	95	132794831	132794744	1.370000e-19	108.0
33	TraesCS3A01G480100	chr1D	88.889	468	39	7	3069	3525	448968125	448967660	6.760000e-157	564.0
34	TraesCS3A01G480100	chr1D	88.421	95	10	1	1	95	121234407	121234314	2.940000e-21	113.0
35	TraesCS3A01G480100	chr1D	84.932	73	9	2	3524	3595	211960568	211960639	4.990000e-09	73.1
36	TraesCS3A01G480100	chr7B	87.021	470	47	5	3069	3524	148767086	148767555	5.340000e-143	518.0
37	TraesCS3A01G480100	chr7B	83.860	285	35	8	2855	3133	449033590	449033311	9.930000e-66	261.0
38	TraesCS3A01G480100	chr5D	86.724	467	48	9	3069	3524	364230281	364230744	1.150000e-139	507.0
39	TraesCS3A01G480100	chr2B	85.865	474	57	7	3069	3534	782512937	782512466	2.500000e-136	496.0
40	TraesCS3A01G480100	chr2B	85.865	474	57	7	3069	3534	782524154	782523683	2.500000e-136	496.0
41	TraesCS3A01G480100	chr2B	77.778	306	57	9	1	298	183956676	183956978	1.030000e-40	178.0
42	TraesCS3A01G480100	chr2B	87.500	72	7	2	3524	3594	322633818	322633888	8.300000e-12	82.4
43	TraesCS3A01G480100	chr1B	86.136	440	53	6	3092	3524	675231565	675231127	5.450000e-128	468.0
44	TraesCS3A01G480100	chr1B	88.043	92	8	3	1	91	184165511	184165422	4.920000e-19	106.0
45	TraesCS3A01G480100	chr2A	84.177	474	56	10	3069	3524	565594287	565594759	3.300000e-120	442.0
46	TraesCS3A01G480100	chr7D	85.305	279	31	8	2860	3132	97837287	97837561	2.740000e-71	279.0
47	TraesCS3A01G480100	chr7D	93.865	163	10	0	2692	2854	315034481	315034319	2.780000e-61	246.0
48	TraesCS3A01G480100	chr6A	83.871	279	35	8	2860	3133	347599113	347598840	1.280000e-64	257.0
49	TraesCS3A01G480100	chr6A	85.915	71	10	0	3524	3594	185551142	185551212	3.860000e-10	76.8
50	TraesCS3A01G480100	chr6D	94.479	163	9	0	2692	2854	220125701	220125539	5.980000e-63	252.0
51	TraesCS3A01G480100	chr6D	87.317	205	24	1	2653	2855	458784829	458784625	2.160000e-57	233.0
52	TraesCS3A01G480100	chr6D	85.185	81	11	1	3524	3603	237566353	237566273	8.300000e-12	82.4
53	TraesCS3A01G480100	chr7A	87.817	197	20	4	2663	2855	116146593	116146789	1.010000e-55	228.0
54	TraesCS3A01G480100	chr5B	94.203	69	4	0	3527	3595	633494925	633494857	4.920000e-19	106.0
55	TraesCS3A01G480100	chr2D	90.625	64	4	2	3524	3586	494477004	494476942	2.310000e-12	84.2

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS3A01G480100	chr3A	711251255	711254859	3604	True	6658.000000	6658	100.0000	1	3605	1	chr3A.!!$R2	3604
1	TraesCS3A01G480100	chr3A	711115264	711117001	1737	False	2298.000000	2298	90.5740	912	2657	1	chr3A.!!$F2	1745
2	TraesCS3A01G480100	chr3B	766593081	766594781	1700	False	2111.000000	2111	89.1010	945	2657	1	chr3B.!!$F2	1712
3	TraesCS3A01G480100	chr3B	766635140	766636841	1701	True	1301.100000	2542	92.7045	905	2669	2	chr3B.!!$R2	1764
4	TraesCS3A01G480100	chr3B	795193668	795194457	789	True	817.000000	817	85.3350	1030	1819	1	chr3B.!!$R1	789
5	TraesCS3A01G480100	chr5A	674371400	674372917	1517	False	1936.000000	1936	89.6530	1030	2556	1	chr5A.!!$F4	1526
6	TraesCS3A01G480100	chr4D	494850555	494852072	1517	False	1934.000000	1934	89.6530	1035	2558	1	chr4D.!!$F2	1523
7	TraesCS3A01G480100	chr4D	494877298	494878654	1356	False	523.000000	523	74.2260	1175	2531	1	chr4D.!!$F3	1356
8	TraesCS3A01G480100	chr4B	634726207	634727810	1603	True	1884.000000	1884	87.9140	940	2558	1	chr4B.!!$R2	1618
9	TraesCS3A01G480100	chr4B	634764852	634766366	1514	False	1847.000000	1847	88.6710	1035	2558	1	chr4B.!!$F1	1523
10	TraesCS3A01G480100	chr3D	575631285	575632919	1634	False	1112.500000	1657	91.1300	926	2602	2	chr3D.!!$F1	1676
11	TraesCS3A01G480100	chr3D	575732562	575734561	1999	True	880.666667	1622	90.0690	620	2654	3	chr3D.!!$R2	2034
12	TraesCS3A01G480100	chr1A	2764930	2765765	835	False	1153.000000	1153	91.7160	2692	3524	1	chr1A.!!$F1	832

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
376	377	0.107945	GGCTTCTGACTGGCCTACTG	60.108	60.0	3.32	0.00	42.31	2.74	F
786	787	0.677414	TGCAGCGCCAGAATTGATCA	60.677	50.0	2.29	0.00	0.00	2.92	F
1689	1783	0.530431	TGACGCCATGGATGTGATCG	60.530	55.0	18.40	10.18	0.00	3.69	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Hairpin	End Stability	Orientation
1598	1692	2.981909	TCGACGCCGAAGACCAGT	60.982	61.111	0.00	42.51	4.00	R
2537	2659	0.545646	GCCTCTTCTTGATCCTGGCT	59.454	55.000	0.00	36.32	4.75	R
3499	3635	0.804364	CACATATGCCTGTGCGTTGT	59.196	50.000	1.58	40.03	3.32	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
21	22	3.468063	GGTCCAACCCACGTCTCT	58.532	61.111	0.00	0.00	30.04	3.10
22	23	1.752833	GGTCCAACCCACGTCTCTT	59.247	57.895	0.00	0.00	30.04	2.85
23	24	0.320508	GGTCCAACCCACGTCTCTTC	60.321	60.000	0.00	0.00	30.04	2.87
24	25	0.391597	GTCCAACCCACGTCTCTTCA	59.608	55.000	0.00	0.00	0.00	3.02
25	26	0.391597	TCCAACCCACGTCTCTTCAC	59.608	55.000	0.00	0.00	0.00	3.18
26	27	0.393077	CCAACCCACGTCTCTTCACT	59.607	55.000	0.00	0.00	0.00	3.41
27	28	1.605712	CCAACCCACGTCTCTTCACTC	60.606	57.143	0.00	0.00	0.00	3.51
28	29	0.314302	AACCCACGTCTCTTCACTCG	59.686	55.000	0.00	0.00	0.00	4.18
29	30	1.213013	CCCACGTCTCTTCACTCGG	59.787	63.158	0.00	0.00	0.00	4.63
30	31	1.444553	CCACGTCTCTTCACTCGGC	60.445	63.158	0.00	0.00	0.00	5.54
31	32	1.444553	CACGTCTCTTCACTCGGCC	60.445	63.158	0.00	0.00	0.00	6.13
32	33	1.901948	ACGTCTCTTCACTCGGCCA	60.902	57.895	2.24	0.00	0.00	5.36
33	34	1.444553	CGTCTCTTCACTCGGCCAC	60.445	63.158	2.24	0.00	0.00	5.01
34	35	1.444553	GTCTCTTCACTCGGCCACG	60.445	63.158	2.24	0.00	42.74	4.94
35	36	2.811317	CTCTTCACTCGGCCACGC	60.811	66.667	2.24	0.00	40.69	5.34
36	37	4.373116	TCTTCACTCGGCCACGCC	62.373	66.667	2.24	0.00	46.75	5.68
46	47	2.566824	GGCCACGCCCATATATTGG	58.433	57.895	0.00	0.00	44.06	3.16
56	57	2.743636	CATATATTGGAGGCGTCGGT	57.256	50.000	0.00	0.00	0.00	4.69
57	58	2.607187	CATATATTGGAGGCGTCGGTC	58.393	52.381	0.00	0.00	0.00	4.79
58	59	1.694844	TATATTGGAGGCGTCGGTCA	58.305	50.000	0.00	0.00	0.00	4.02
59	60	0.828022	ATATTGGAGGCGTCGGTCAA	59.172	50.000	0.00	0.00	0.00	3.18
60	61	0.108520	TATTGGAGGCGTCGGTCAAC	60.109	55.000	0.00	0.00	0.00	3.18
61	62	2.798148	ATTGGAGGCGTCGGTCAACC	62.798	60.000	0.00	0.00	0.00	3.77
62	63	4.754667	GGAGGCGTCGGTCAACCC	62.755	72.222	0.00	0.00	0.00	4.11
63	64	3.692406	GAGGCGTCGGTCAACCCT	61.692	66.667	0.00	0.00	0.00	4.34
64	65	2.283388	AGGCGTCGGTCAACCCTA	60.283	61.111	0.00	0.00	0.00	3.53
65	66	2.183555	GGCGTCGGTCAACCCTAG	59.816	66.667	0.00	0.00	0.00	3.02
66	67	2.508663	GCGTCGGTCAACCCTAGC	60.509	66.667	0.00	0.00	0.00	3.42
67	68	2.183555	CGTCGGTCAACCCTAGCC	59.816	66.667	0.00	0.00	0.00	3.93
68	69	2.183555	GTCGGTCAACCCTAGCCG	59.816	66.667	0.00	0.00	44.95	5.52
69	70	3.766691	TCGGTCAACCCTAGCCGC	61.767	66.667	0.00	0.00	43.45	6.53
70	71	4.832608	CGGTCAACCCTAGCCGCC	62.833	72.222	0.00	0.00	37.69	6.13
71	72	3.712907	GGTCAACCCTAGCCGCCA	61.713	66.667	0.00	0.00	0.00	5.69
72	73	2.436115	GTCAACCCTAGCCGCCAC	60.436	66.667	0.00	0.00	0.00	5.01
73	74	2.925706	TCAACCCTAGCCGCCACA	60.926	61.111	0.00	0.00	0.00	4.17
74	75	2.033448	CAACCCTAGCCGCCACAA	59.967	61.111	0.00	0.00	0.00	3.33
75	76	1.602323	CAACCCTAGCCGCCACAAA	60.602	57.895	0.00	0.00	0.00	2.83
76	77	1.303317	AACCCTAGCCGCCACAAAG	60.303	57.895	0.00	0.00	0.00	2.77
77	78	1.774894	AACCCTAGCCGCCACAAAGA	61.775	55.000	0.00	0.00	0.00	2.52
78	79	1.002624	CCCTAGCCGCCACAAAGAA	60.003	57.895	0.00	0.00	0.00	2.52
79	80	1.305930	CCCTAGCCGCCACAAAGAAC	61.306	60.000	0.00	0.00	0.00	3.01
80	81	0.605319	CCTAGCCGCCACAAAGAACA	60.605	55.000	0.00	0.00	0.00	3.18
81	82	1.453155	CTAGCCGCCACAAAGAACAT	58.547	50.000	0.00	0.00	0.00	2.71
82	83	2.627945	CTAGCCGCCACAAAGAACATA	58.372	47.619	0.00	0.00	0.00	2.29
83	84	2.128771	AGCCGCCACAAAGAACATAT	57.871	45.000	0.00	0.00	0.00	1.78
84	85	2.017049	AGCCGCCACAAAGAACATATC	58.983	47.619	0.00	0.00	0.00	1.63
85	86	1.742831	GCCGCCACAAAGAACATATCA	59.257	47.619	0.00	0.00	0.00	2.15
86	87	2.477863	GCCGCCACAAAGAACATATCAC	60.478	50.000	0.00	0.00	0.00	3.06
87	88	2.746904	CCGCCACAAAGAACATATCACA	59.253	45.455	0.00	0.00	0.00	3.58
88	89	3.378112	CCGCCACAAAGAACATATCACAT	59.622	43.478	0.00	0.00	0.00	3.21
89	90	4.496341	CCGCCACAAAGAACATATCACATC	60.496	45.833	0.00	0.00	0.00	3.06
90	91	4.333649	CGCCACAAAGAACATATCACATCT	59.666	41.667	0.00	0.00	0.00	2.90
91	92	5.575957	GCCACAAAGAACATATCACATCTG	58.424	41.667	0.00	0.00	0.00	2.90
92	93	5.575957	CCACAAAGAACATATCACATCTGC	58.424	41.667	0.00	0.00	0.00	4.26
93	94	5.356190	CCACAAAGAACATATCACATCTGCT	59.644	40.000	0.00	0.00	0.00	4.24
94	95	6.457934	CCACAAAGAACATATCACATCTGCTC	60.458	42.308	0.00	0.00	0.00	4.26
95	96	5.587844	ACAAAGAACATATCACATCTGCTCC	59.412	40.000	0.00	0.00	0.00	4.70
96	97	5.363562	AAGAACATATCACATCTGCTCCA	57.636	39.130	0.00	0.00	0.00	3.86
97	98	4.701765	AGAACATATCACATCTGCTCCAC	58.298	43.478	0.00	0.00	0.00	4.02
98	99	3.103447	ACATATCACATCTGCTCCACG	57.897	47.619	0.00	0.00	0.00	4.94
99	100	2.224137	ACATATCACATCTGCTCCACGG	60.224	50.000	0.00	0.00	0.00	4.94
100	101	1.485124	TATCACATCTGCTCCACGGT	58.515	50.000	0.00	0.00	0.00	4.83
101	102	0.176680	ATCACATCTGCTCCACGGTC	59.823	55.000	0.00	0.00	0.00	4.79
102	103	1.184970	TCACATCTGCTCCACGGTCA	61.185	55.000	0.00	0.00	0.00	4.02
103	104	1.016130	CACATCTGCTCCACGGTCAC	61.016	60.000	0.00	0.00	0.00	3.67
105	106	3.006756	ATCTGCTCCACGGTCACGG	62.007	63.158	0.00	0.00	46.48	4.94
106	107	3.991051	CTGCTCCACGGTCACGGT	61.991	66.667	0.00	0.00	46.48	4.83
107	108	3.916392	CTGCTCCACGGTCACGGTC	62.916	68.421	0.00	0.00	46.48	4.79
108	109	3.986006	GCTCCACGGTCACGGTCA	61.986	66.667	0.00	0.00	46.48	4.02
109	110	2.258591	CTCCACGGTCACGGTCAG	59.741	66.667	0.00	0.00	46.48	3.51
110	111	2.520020	TCCACGGTCACGGTCAGT	60.520	61.111	0.00	0.00	46.48	3.41
111	112	2.049433	CCACGGTCACGGTCAGTC	60.049	66.667	0.00	0.00	46.48	3.51
112	113	2.049433	CACGGTCACGGTCAGTCC	60.049	66.667	0.00	0.00	46.48	3.85
113	114	2.203451	ACGGTCACGGTCAGTCCT	60.203	61.111	0.00	0.00	46.48	3.85
114	115	1.831286	ACGGTCACGGTCAGTCCTT	60.831	57.895	0.00	0.00	46.48	3.36
115	116	1.366366	CGGTCACGGTCAGTCCTTT	59.634	57.895	0.00	0.00	36.18	3.11
116	117	0.249741	CGGTCACGGTCAGTCCTTTT	60.250	55.000	0.00	0.00	36.18	2.27
117	118	1.226746	GGTCACGGTCAGTCCTTTTG	58.773	55.000	0.00	0.00	0.00	2.44
118	119	0.586802	GTCACGGTCAGTCCTTTTGC	59.413	55.000	0.00	0.00	0.00	3.68
119	120	0.468226	TCACGGTCAGTCCTTTTGCT	59.532	50.000	0.00	0.00	0.00	3.91
120	121	0.588252	CACGGTCAGTCCTTTTGCTG	59.412	55.000	0.00	0.00	0.00	4.41
121	122	1.166531	ACGGTCAGTCCTTTTGCTGC	61.167	55.000	0.00	0.00	33.09	5.25
122	123	1.856265	CGGTCAGTCCTTTTGCTGCC	61.856	60.000	0.00	0.00	33.09	4.85
123	124	1.576421	GTCAGTCCTTTTGCTGCCG	59.424	57.895	0.00	0.00	33.09	5.69
124	125	2.256461	CAGTCCTTTTGCTGCCGC	59.744	61.111	0.00	0.00	0.00	6.53
125	126	2.985847	AGTCCTTTTGCTGCCGCC	60.986	61.111	0.00	0.00	34.43	6.13
126	127	4.404654	GTCCTTTTGCTGCCGCCG	62.405	66.667	0.00	0.00	34.43	6.46
129	130	4.705519	CTTTTGCTGCCGCCGGTG	62.706	66.667	8.42	8.42	34.43	4.94
138	139	4.626081	CCGCCGGTGATCCCATCC	62.626	72.222	18.79	0.00	0.00	3.51
139	140	4.626081	CGCCGGTGATCCCATCCC	62.626	72.222	10.20	0.00	0.00	3.85
140	141	4.626081	GCCGGTGATCCCATCCCG	62.626	72.222	1.90	0.00	40.49	5.14
141	142	3.161450	CCGGTGATCCCATCCCGT	61.161	66.667	0.00	0.00	39.73	5.28
142	143	2.742116	CCGGTGATCCCATCCCGTT	61.742	63.158	0.00	0.00	39.73	4.44
143	144	1.227556	CGGTGATCCCATCCCGTTC	60.228	63.158	0.00	0.00	37.91	3.95
144	145	1.912220	GGTGATCCCATCCCGTTCA	59.088	57.895	0.00	0.00	0.00	3.18
145	146	0.463833	GGTGATCCCATCCCGTTCAC	60.464	60.000	0.00	0.00	36.76	3.18
146	147	0.463833	GTGATCCCATCCCGTTCACC	60.464	60.000	0.00	0.00	32.47	4.02
147	148	1.227556	GATCCCATCCCGTTCACCG	60.228	63.158	0.00	0.00	0.00	4.94
148	149	3.400599	ATCCCATCCCGTTCACCGC	62.401	63.158	0.00	0.00	34.38	5.68
163	164	3.160900	CGCGCACACGGTTAATGA	58.839	55.556	8.75	0.00	40.57	2.57
164	165	1.058748	CGCGCACACGGTTAATGAG	59.941	57.895	8.75	0.00	40.57	2.90
165	166	1.348538	CGCGCACACGGTTAATGAGA	61.349	55.000	8.75	0.00	40.57	3.27
166	167	0.370273	GCGCACACGGTTAATGAGAG	59.630	55.000	0.30	0.00	40.57	3.20
167	168	1.990799	CGCACACGGTTAATGAGAGA	58.009	50.000	0.00	0.00	34.97	3.10
168	169	1.920574	CGCACACGGTTAATGAGAGAG	59.079	52.381	0.00	0.00	34.97	3.20
169	170	2.671351	CGCACACGGTTAATGAGAGAGT	60.671	50.000	0.00	0.00	34.97	3.24
170	171	3.427098	CGCACACGGTTAATGAGAGAGTA	60.427	47.826	0.00	0.00	34.97	2.59
171	172	4.106197	GCACACGGTTAATGAGAGAGTAG	58.894	47.826	0.00	0.00	0.00	2.57
172	173	4.380655	GCACACGGTTAATGAGAGAGTAGT	60.381	45.833	0.00	0.00	0.00	2.73
173	174	5.333513	CACACGGTTAATGAGAGAGTAGTC	58.666	45.833	0.00	0.00	0.00	2.59
174	175	4.398673	ACACGGTTAATGAGAGAGTAGTCC	59.601	45.833	0.00	0.00	0.00	3.85
175	176	4.641094	CACGGTTAATGAGAGAGTAGTCCT	59.359	45.833	0.00	0.00	0.00	3.85
176	177	4.883006	ACGGTTAATGAGAGAGTAGTCCTC	59.117	45.833	8.38	8.38	40.80	3.71
177	178	4.276431	CGGTTAATGAGAGAGTAGTCCTCC	59.724	50.000	11.36	0.00	41.47	4.30
178	179	4.276431	GGTTAATGAGAGAGTAGTCCTCCG	59.724	50.000	11.36	0.00	41.47	4.63
179	180	3.935818	AATGAGAGAGTAGTCCTCCGA	57.064	47.619	11.36	0.00	41.47	4.55
180	181	3.935818	ATGAGAGAGTAGTCCTCCGAA	57.064	47.619	11.36	0.00	41.47	4.30
181	182	3.715638	TGAGAGAGTAGTCCTCCGAAA	57.284	47.619	11.36	0.00	41.47	3.46
182	183	3.345414	TGAGAGAGTAGTCCTCCGAAAC	58.655	50.000	11.36	0.00	41.47	2.78
183	184	3.244805	TGAGAGAGTAGTCCTCCGAAACA	60.245	47.826	11.36	0.00	41.47	2.83
184	185	3.083293	AGAGAGTAGTCCTCCGAAACAC	58.917	50.000	0.00	0.00	41.47	3.32
185	186	3.083293	GAGAGTAGTCCTCCGAAACACT	58.917	50.000	0.00	0.00	41.47	3.55
186	187	2.820787	AGAGTAGTCCTCCGAAACACTG	59.179	50.000	0.00	0.00	41.47	3.66
187	188	1.893801	AGTAGTCCTCCGAAACACTGG	59.106	52.381	0.00	0.00	0.00	4.00
188	189	0.606604	TAGTCCTCCGAAACACTGGC	59.393	55.000	0.00	0.00	0.00	4.85
189	190	1.122019	AGTCCTCCGAAACACTGGCT	61.122	55.000	0.00	0.00	0.00	4.75
190	191	0.670854	GTCCTCCGAAACACTGGCTC	60.671	60.000	0.00	0.00	0.00	4.70
191	192	0.832135	TCCTCCGAAACACTGGCTCT	60.832	55.000	0.00	0.00	0.00	4.09
192	193	0.390472	CCTCCGAAACACTGGCTCTC	60.390	60.000	0.00	0.00	0.00	3.20
193	194	0.390472	CTCCGAAACACTGGCTCTCC	60.390	60.000	0.00	0.00	0.00	3.71
194	195	1.118965	TCCGAAACACTGGCTCTCCA	61.119	55.000	0.00	0.00	40.85	3.86
205	206	1.751351	TGGCTCTCCAGATTCTGTACG	59.249	52.381	12.54	0.00	37.47	3.67
206	207	1.067821	GGCTCTCCAGATTCTGTACGG	59.932	57.143	12.54	0.00	0.00	4.02
207	208	1.067821	GCTCTCCAGATTCTGTACGGG	59.932	57.143	12.54	1.95	0.00	5.28
208	209	2.656002	CTCTCCAGATTCTGTACGGGA	58.344	52.381	12.54	0.00	0.00	5.14
209	210	2.621055	CTCTCCAGATTCTGTACGGGAG	59.379	54.545	12.54	10.94	45.17	4.30
210	211	1.683917	CTCCAGATTCTGTACGGGAGG	59.316	57.143	12.54	0.00	42.01	4.30
211	212	0.753262	CCAGATTCTGTACGGGAGGG	59.247	60.000	12.54	0.00	0.00	4.30
212	213	1.688311	CCAGATTCTGTACGGGAGGGA	60.688	57.143	12.54	0.00	0.00	4.20
213	214	1.683917	CAGATTCTGTACGGGAGGGAG	59.316	57.143	5.46	0.00	0.00	4.30
214	215	1.041437	GATTCTGTACGGGAGGGAGG	58.959	60.000	0.85	0.00	0.00	4.30
215	216	1.049289	ATTCTGTACGGGAGGGAGGC	61.049	60.000	0.85	0.00	0.00	4.70
216	217	2.363795	CTGTACGGGAGGGAGGCA	60.364	66.667	0.00	0.00	0.00	4.75
217	218	1.987855	CTGTACGGGAGGGAGGCAA	60.988	63.158	0.00	0.00	0.00	4.52
218	219	1.306654	TGTACGGGAGGGAGGCAAT	60.307	57.895	0.00	0.00	0.00	3.56
219	220	0.912487	TGTACGGGAGGGAGGCAATT	60.912	55.000	0.00	0.00	0.00	2.32
220	221	1.125633	GTACGGGAGGGAGGCAATTA	58.874	55.000	0.00	0.00	0.00	1.40
221	222	1.070289	GTACGGGAGGGAGGCAATTAG	59.930	57.143	0.00	0.00	0.00	1.73
222	223	1.345715	ACGGGAGGGAGGCAATTAGG	61.346	60.000	0.00	0.00	0.00	2.69
223	224	1.345715	CGGGAGGGAGGCAATTAGGT	61.346	60.000	0.00	0.00	0.00	3.08
224	225	0.927029	GGGAGGGAGGCAATTAGGTT	59.073	55.000	0.00	0.00	0.00	3.50
225	226	1.288037	GGGAGGGAGGCAATTAGGTTT	59.712	52.381	0.00	0.00	0.00	3.27
226	227	2.292257	GGGAGGGAGGCAATTAGGTTTT	60.292	50.000	0.00	0.00	0.00	2.43
227	228	3.441101	GGAGGGAGGCAATTAGGTTTTT	58.559	45.455	0.00	0.00	0.00	1.94
228	229	3.195610	GGAGGGAGGCAATTAGGTTTTTG	59.804	47.826	0.00	0.00	0.00	2.44
229	230	3.832490	GAGGGAGGCAATTAGGTTTTTGT	59.168	43.478	0.00	0.00	0.00	2.83
230	231	3.578282	AGGGAGGCAATTAGGTTTTTGTG	59.422	43.478	0.00	0.00	0.00	3.33
231	232	3.576550	GGGAGGCAATTAGGTTTTTGTGA	59.423	43.478	0.00	0.00	0.00	3.58
232	233	4.039852	GGGAGGCAATTAGGTTTTTGTGAA	59.960	41.667	0.00	0.00	0.00	3.18
233	234	5.230182	GGAGGCAATTAGGTTTTTGTGAAG	58.770	41.667	0.00	0.00	0.00	3.02
234	235	4.631131	AGGCAATTAGGTTTTTGTGAAGC	58.369	39.130	0.00	0.00	0.00	3.86
235	236	3.428534	GGCAATTAGGTTTTTGTGAAGCG	59.571	43.478	0.00	0.00	32.52	4.68
236	237	4.295051	GCAATTAGGTTTTTGTGAAGCGA	58.705	39.130	0.00	0.00	32.52	4.93
237	238	4.148174	GCAATTAGGTTTTTGTGAAGCGAC	59.852	41.667	0.00	0.00	32.52	5.19
238	239	5.519722	CAATTAGGTTTTTGTGAAGCGACT	58.480	37.500	0.00	0.00	32.52	4.18
239	240	4.545823	TTAGGTTTTTGTGAAGCGACTG	57.454	40.909	0.00	0.00	32.52	3.51
240	241	2.365582	AGGTTTTTGTGAAGCGACTGT	58.634	42.857	0.00	0.00	32.52	3.55
241	242	2.752903	AGGTTTTTGTGAAGCGACTGTT	59.247	40.909	0.00	0.00	32.52	3.16
242	243	3.942748	AGGTTTTTGTGAAGCGACTGTTA	59.057	39.130	0.00	0.00	32.52	2.41
243	244	4.033019	GGTTTTTGTGAAGCGACTGTTAC	58.967	43.478	0.00	0.00	0.00	2.50
244	245	3.579147	TTTTGTGAAGCGACTGTTACG	57.421	42.857	0.00	0.00	0.00	3.18
250	251	3.061674	GCGACTGTTACGCGACTG	58.938	61.111	15.93	8.32	46.05	3.51
251	252	3.055905	GCGACTGTTACGCGACTGC	62.056	63.158	15.93	0.74	46.05	4.40
252	253	1.442184	CGACTGTTACGCGACTGCT	60.442	57.895	15.93	0.00	39.65	4.24
253	254	1.396543	CGACTGTTACGCGACTGCTC	61.397	60.000	15.93	5.41	39.65	4.26
254	255	0.386858	GACTGTTACGCGACTGCTCA	60.387	55.000	15.93	2.06	39.65	4.26
255	256	0.663568	ACTGTTACGCGACTGCTCAC	60.664	55.000	15.93	0.00	39.65	3.51
256	257	0.387367	CTGTTACGCGACTGCTCACT	60.387	55.000	15.93	0.00	39.65	3.41
257	258	0.663269	TGTTACGCGACTGCTCACTG	60.663	55.000	15.93	0.00	39.65	3.66
258	259	1.733041	TTACGCGACTGCTCACTGC	60.733	57.895	15.93	0.00	39.65	4.40
259	260	3.626680	TACGCGACTGCTCACTGCC	62.627	63.158	15.93	0.00	42.00	4.85
262	263	2.356313	CGACTGCTCACTGCCGTT	60.356	61.111	0.00	0.00	39.21	4.44
263	264	2.375766	CGACTGCTCACTGCCGTTC	61.376	63.158	0.00	0.00	39.21	3.95
264	265	2.356313	ACTGCTCACTGCCGTTCG	60.356	61.111	0.00	0.00	42.00	3.95
265	266	2.356313	CTGCTCACTGCCGTTCGT	60.356	61.111	0.00	0.00	42.00	3.85
266	267	2.355837	TGCTCACTGCCGTTCGTC	60.356	61.111	0.00	0.00	42.00	4.20
267	268	3.112709	GCTCACTGCCGTTCGTCC	61.113	66.667	0.00	0.00	35.15	4.79
268	269	2.338620	CTCACTGCCGTTCGTCCA	59.661	61.111	0.00	0.00	0.00	4.02
269	270	2.022129	CTCACTGCCGTTCGTCCAC	61.022	63.158	0.00	0.00	0.00	4.02
270	271	2.279851	CACTGCCGTTCGTCCACA	60.280	61.111	0.00	0.00	0.00	4.17
271	272	1.667830	CACTGCCGTTCGTCCACAT	60.668	57.895	0.00	0.00	0.00	3.21
272	273	1.374252	ACTGCCGTTCGTCCACATC	60.374	57.895	0.00	0.00	0.00	3.06
273	274	2.047655	TGCCGTTCGTCCACATCC	60.048	61.111	0.00	0.00	0.00	3.51
274	275	2.047655	GCCGTTCGTCCACATCCA	60.048	61.111	0.00	0.00	0.00	3.41
275	276	2.388232	GCCGTTCGTCCACATCCAC	61.388	63.158	0.00	0.00	0.00	4.02
276	277	1.292223	CCGTTCGTCCACATCCACT	59.708	57.895	0.00	0.00	0.00	4.00
277	278	1.014044	CCGTTCGTCCACATCCACTG	61.014	60.000	0.00	0.00	0.00	3.66
278	279	1.626654	CGTTCGTCCACATCCACTGC	61.627	60.000	0.00	0.00	0.00	4.40
279	280	0.602638	GTTCGTCCACATCCACTGCA	60.603	55.000	0.00	0.00	0.00	4.41
280	281	0.324614	TTCGTCCACATCCACTGCAT	59.675	50.000	0.00	0.00	0.00	3.96
281	282	0.324614	TCGTCCACATCCACTGCATT	59.675	50.000	0.00	0.00	0.00	3.56
282	283	0.448990	CGTCCACATCCACTGCATTG	59.551	55.000	0.00	0.00	0.00	2.82
283	284	1.538047	GTCCACATCCACTGCATTGT	58.462	50.000	3.14	0.00	0.00	2.71
284	285	1.470098	GTCCACATCCACTGCATTGTC	59.530	52.381	3.14	0.00	0.00	3.18
285	286	1.352017	TCCACATCCACTGCATTGTCT	59.648	47.619	3.14	0.00	0.00	3.41
286	287	2.571202	TCCACATCCACTGCATTGTCTA	59.429	45.455	3.14	0.00	0.00	2.59
287	288	2.679837	CCACATCCACTGCATTGTCTAC	59.320	50.000	3.14	0.00	0.00	2.59
288	289	2.349580	CACATCCACTGCATTGTCTACG	59.650	50.000	3.14	0.00	0.00	3.51
289	290	2.028112	ACATCCACTGCATTGTCTACGT	60.028	45.455	3.14	0.00	0.00	3.57
290	291	2.831685	TCCACTGCATTGTCTACGTT	57.168	45.000	3.14	0.00	0.00	3.99
291	292	2.683968	TCCACTGCATTGTCTACGTTC	58.316	47.619	3.14	0.00	0.00	3.95
292	293	1.732259	CCACTGCATTGTCTACGTTCC	59.268	52.381	3.14	0.00	0.00	3.62
293	294	1.390123	CACTGCATTGTCTACGTTCCG	59.610	52.381	0.00	0.00	0.00	4.30
294	295	0.370273	CTGCATTGTCTACGTTCCGC	59.630	55.000	0.00	0.00	0.00	5.54
304	305	2.431771	CGTTCCGCGTCATCACCA	60.432	61.111	4.92	0.00	35.54	4.17
305	306	1.809619	CGTTCCGCGTCATCACCAT	60.810	57.895	4.92	0.00	35.54	3.55
306	307	1.715585	GTTCCGCGTCATCACCATG	59.284	57.895	4.92	0.00	0.00	3.66
307	308	1.019278	GTTCCGCGTCATCACCATGT	61.019	55.000	4.92	0.00	0.00	3.21
308	309	0.739462	TTCCGCGTCATCACCATGTC	60.739	55.000	4.92	0.00	0.00	3.06
309	310	2.173669	CCGCGTCATCACCATGTCC	61.174	63.158	4.92	0.00	0.00	4.02
310	311	1.447663	CGCGTCATCACCATGTCCA	60.448	57.895	0.00	0.00	0.00	4.02
311	312	1.695893	CGCGTCATCACCATGTCCAC	61.696	60.000	0.00	0.00	0.00	4.02
312	313	1.369091	GCGTCATCACCATGTCCACC	61.369	60.000	0.00	0.00	0.00	4.61
313	314	1.083806	CGTCATCACCATGTCCACCG	61.084	60.000	0.00	0.00	0.00	4.94
314	315	1.078497	TCATCACCATGTCCACCGC	60.078	57.895	0.00	0.00	0.00	5.68
315	316	2.114670	CATCACCATGTCCACCGCC	61.115	63.158	0.00	0.00	0.00	6.13
316	317	2.601702	ATCACCATGTCCACCGCCA	61.602	57.895	0.00	0.00	0.00	5.69
317	318	2.135903	ATCACCATGTCCACCGCCAA	62.136	55.000	0.00	0.00	0.00	4.52
318	319	1.678635	CACCATGTCCACCGCCAAT	60.679	57.895	0.00	0.00	0.00	3.16
319	320	1.678635	ACCATGTCCACCGCCAATG	60.679	57.895	0.00	0.00	0.00	2.82
320	321	1.378382	CCATGTCCACCGCCAATGA	60.378	57.895	0.00	0.00	0.00	2.57
321	322	1.656818	CCATGTCCACCGCCAATGAC	61.657	60.000	0.00	0.00	0.00	3.06
322	323	1.745115	ATGTCCACCGCCAATGACG	60.745	57.895	0.00	0.00	0.00	4.35
323	324	2.358247	GTCCACCGCCAATGACGT	60.358	61.111	0.00	0.00	0.00	4.34
324	325	2.047655	TCCACCGCCAATGACGTC	60.048	61.111	9.11	9.11	0.00	4.34
325	326	3.487202	CCACCGCCAATGACGTCG	61.487	66.667	11.62	0.00	0.00	5.12
326	327	2.431771	CACCGCCAATGACGTCGA	60.432	61.111	11.62	0.26	0.00	4.20
327	328	1.809619	CACCGCCAATGACGTCGAT	60.810	57.895	11.62	2.87	0.00	3.59
328	329	1.518572	ACCGCCAATGACGTCGATC	60.519	57.895	11.62	0.00	0.00	3.69
329	330	1.518352	CCGCCAATGACGTCGATCA	60.518	57.895	11.62	0.00	0.00	2.92
330	331	0.875908	CCGCCAATGACGTCGATCAT	60.876	55.000	11.62	1.79	41.20	2.45
332	333	1.071239	CGCCAATGACGTCGATCATTC	60.071	52.381	11.62	2.02	44.30	2.67
333	334	1.261619	GCCAATGACGTCGATCATTCC	59.738	52.381	11.62	3.23	44.30	3.01
334	335	1.522676	CCAATGACGTCGATCATTCCG	59.477	52.381	11.62	0.56	44.30	4.30
335	336	1.071239	CAATGACGTCGATCATTCCGC	60.071	52.381	11.62	0.00	44.30	5.54
336	337	0.597637	ATGACGTCGATCATTCCGCC	60.598	55.000	11.62	0.00	35.76	6.13
337	338	1.226859	GACGTCGATCATTCCGCCA	60.227	57.895	0.00	0.00	0.00	5.69
338	339	1.480219	GACGTCGATCATTCCGCCAC	61.480	60.000	0.00	0.00	0.00	5.01
339	340	2.237751	CGTCGATCATTCCGCCACC	61.238	63.158	0.00	0.00	0.00	4.61
340	341	2.106131	TCGATCATTCCGCCACCG	59.894	61.111	0.00	0.00	0.00	4.94
341	342	2.106131	CGATCATTCCGCCACCGA	59.894	61.111	0.00	0.00	36.29	4.69
342	343	1.951130	CGATCATTCCGCCACCGAG	60.951	63.158	0.00	0.00	36.29	4.63
343	344	1.441729	GATCATTCCGCCACCGAGA	59.558	57.895	0.00	0.00	36.29	4.04
344	345	0.179084	GATCATTCCGCCACCGAGAA	60.179	55.000	0.00	0.00	36.29	2.87
345	346	0.179073	ATCATTCCGCCACCGAGAAG	60.179	55.000	0.00	0.00	36.29	2.85
346	347	1.218047	CATTCCGCCACCGAGAAGA	59.782	57.895	0.00	0.00	36.29	2.87
347	348	0.391130	CATTCCGCCACCGAGAAGAA	60.391	55.000	0.00	0.00	36.29	2.52
348	349	0.108138	ATTCCGCCACCGAGAAGAAG	60.108	55.000	0.00	0.00	36.29	2.85
349	350	1.183030	TTCCGCCACCGAGAAGAAGA	61.183	55.000	0.00	0.00	36.29	2.87
350	351	1.446272	CCGCCACCGAGAAGAAGAC	60.446	63.158	0.00	0.00	36.29	3.01
351	352	1.446272	CGCCACCGAGAAGAAGACC	60.446	63.158	0.00	0.00	36.29	3.85
352	353	1.446272	GCCACCGAGAAGAAGACCG	60.446	63.158	0.00	0.00	0.00	4.79
353	354	1.446272	CCACCGAGAAGAAGACCGC	60.446	63.158	0.00	0.00	0.00	5.68
354	355	1.446272	CACCGAGAAGAAGACCGCC	60.446	63.158	0.00	0.00	0.00	6.13
355	356	2.202623	CCGAGAAGAAGACCGCCG	60.203	66.667	0.00	0.00	0.00	6.46
356	357	2.881352	CGAGAAGAAGACCGCCGC	60.881	66.667	0.00	0.00	0.00	6.53
357	358	2.881352	GAGAAGAAGACCGCCGCG	60.881	66.667	5.59	5.59	0.00	6.46
372	373	4.400961	GCGGCTTCTGACTGGCCT	62.401	66.667	3.32	0.00	43.29	5.19
373	374	3.019003	GCGGCTTCTGACTGGCCTA	62.019	63.158	3.32	0.00	43.29	3.93
374	375	1.153549	CGGCTTCTGACTGGCCTAC	60.154	63.158	3.32	0.00	43.29	3.18
375	376	1.608717	CGGCTTCTGACTGGCCTACT	61.609	60.000	3.32	0.00	43.29	2.57
376	377	0.107945	GGCTTCTGACTGGCCTACTG	60.108	60.000	3.32	0.00	42.31	2.74
377	378	0.898320	GCTTCTGACTGGCCTACTGA	59.102	55.000	3.32	2.15	0.00	3.41
378	379	1.276421	GCTTCTGACTGGCCTACTGAA	59.724	52.381	3.32	9.88	0.00	3.02
379	380	2.676463	GCTTCTGACTGGCCTACTGAAG	60.676	54.545	24.21	24.21	40.19	3.02
380	381	2.604912	TCTGACTGGCCTACTGAAGA	57.395	50.000	3.32	0.00	0.00	2.87
381	382	2.451490	TCTGACTGGCCTACTGAAGAG	58.549	52.381	3.32	0.00	0.00	2.85
382	383	2.175202	CTGACTGGCCTACTGAAGAGT	58.825	52.381	3.32	0.00	36.07	3.24
383	384	3.010250	TCTGACTGGCCTACTGAAGAGTA	59.990	47.826	3.32	0.00	33.21	2.59
384	385	3.957497	CTGACTGGCCTACTGAAGAGTAT	59.043	47.826	3.32	0.00	34.05	2.12
385	386	5.104067	TCTGACTGGCCTACTGAAGAGTATA	60.104	44.000	3.32	0.00	34.05	1.47
386	387	5.516044	TGACTGGCCTACTGAAGAGTATAA	58.484	41.667	3.32	0.00	34.05	0.98
387	388	5.360144	TGACTGGCCTACTGAAGAGTATAAC	59.640	44.000	3.32	0.00	34.05	1.89
388	389	5.520751	ACTGGCCTACTGAAGAGTATAACT	58.479	41.667	3.32	0.00	34.05	2.24
389	390	5.595133	ACTGGCCTACTGAAGAGTATAACTC	59.405	44.000	3.32	0.00	45.38	3.01
401	402	5.211174	GAGTATAACTCATTTACCCCGCT	57.789	43.478	2.22	0.00	44.45	5.52
402	403	5.608449	GAGTATAACTCATTTACCCCGCTT	58.392	41.667	2.22	0.00	44.45	4.68
403	404	5.608449	AGTATAACTCATTTACCCCGCTTC	58.392	41.667	0.00	0.00	0.00	3.86
404	405	4.772886	ATAACTCATTTACCCCGCTTCT	57.227	40.909	0.00	0.00	0.00	2.85
405	406	2.403252	ACTCATTTACCCCGCTTCTG	57.597	50.000	0.00	0.00	0.00	3.02
406	407	1.628846	ACTCATTTACCCCGCTTCTGT	59.371	47.619	0.00	0.00	0.00	3.41
407	408	2.039879	ACTCATTTACCCCGCTTCTGTT	59.960	45.455	0.00	0.00	0.00	3.16
408	409	3.081804	CTCATTTACCCCGCTTCTGTTT	58.918	45.455	0.00	0.00	0.00	2.83
409	410	3.078837	TCATTTACCCCGCTTCTGTTTC	58.921	45.455	0.00	0.00	0.00	2.78
410	411	2.943036	TTTACCCCGCTTCTGTTTCT	57.057	45.000	0.00	0.00	0.00	2.52
411	412	2.943036	TTACCCCGCTTCTGTTTCTT	57.057	45.000	0.00	0.00	0.00	2.52
412	413	2.943036	TACCCCGCTTCTGTTTCTTT	57.057	45.000	0.00	0.00	0.00	2.52
413	414	1.605753	ACCCCGCTTCTGTTTCTTTC	58.394	50.000	0.00	0.00	0.00	2.62
414	415	1.143073	ACCCCGCTTCTGTTTCTTTCT	59.857	47.619	0.00	0.00	0.00	2.52
415	416	1.537202	CCCCGCTTCTGTTTCTTTCTG	59.463	52.381	0.00	0.00	0.00	3.02
416	417	2.222027	CCCGCTTCTGTTTCTTTCTGT	58.778	47.619	0.00	0.00	0.00	3.41
417	418	2.224314	CCCGCTTCTGTTTCTTTCTGTC	59.776	50.000	0.00	0.00	0.00	3.51
418	419	3.134458	CCGCTTCTGTTTCTTTCTGTCT	58.866	45.455	0.00	0.00	0.00	3.41
419	420	3.561725	CCGCTTCTGTTTCTTTCTGTCTT	59.438	43.478	0.00	0.00	0.00	3.01
420	421	4.521943	CGCTTCTGTTTCTTTCTGTCTTG	58.478	43.478	0.00	0.00	0.00	3.02
421	422	4.271049	CGCTTCTGTTTCTTTCTGTCTTGA	59.729	41.667	0.00	0.00	0.00	3.02
422	423	5.506181	GCTTCTGTTTCTTTCTGTCTTGAC	58.494	41.667	0.00	0.00	0.00	3.18
423	424	5.065218	GCTTCTGTTTCTTTCTGTCTTGACA	59.935	40.000	3.32	3.32	0.00	3.58
424	425	6.668541	TTCTGTTTCTTTCTGTCTTGACAG	57.331	37.500	21.04	21.04	39.00	3.51
425	426	5.734720	TCTGTTTCTTTCTGTCTTGACAGT	58.265	37.500	24.47	0.00	38.75	3.55
426	427	6.873997	TCTGTTTCTTTCTGTCTTGACAGTA	58.126	36.000	24.47	15.91	38.75	2.74
427	428	6.757010	TCTGTTTCTTTCTGTCTTGACAGTAC	59.243	38.462	24.47	15.71	38.75	2.73
428	429	6.403049	TGTTTCTTTCTGTCTTGACAGTACA	58.597	36.000	24.47	17.35	38.75	2.90
429	430	6.876789	TGTTTCTTTCTGTCTTGACAGTACAA	59.123	34.615	24.47	16.48	38.75	2.41
430	431	7.064609	TGTTTCTTTCTGTCTTGACAGTACAAG	59.935	37.037	24.47	22.28	45.73	3.16
431	432	6.222038	TCTTTCTGTCTTGACAGTACAAGT	57.778	37.500	24.47	0.00	44.96	3.16
432	433	6.640518	TCTTTCTGTCTTGACAGTACAAGTT	58.359	36.000	24.47	0.00	44.96	2.66
433	434	6.535150	TCTTTCTGTCTTGACAGTACAAGTTG	59.465	38.462	24.47	0.00	44.96	3.16
434	435	5.339008	TCTGTCTTGACAGTACAAGTTGT	57.661	39.130	24.47	14.05	44.96	3.32
435	436	5.109210	TCTGTCTTGACAGTACAAGTTGTG	58.891	41.667	24.47	4.61	44.96	3.33
436	437	3.621268	TGTCTTGACAGTACAAGTTGTGC	59.379	43.478	18.90	17.13	44.96	4.57
437	438	3.621268	GTCTTGACAGTACAAGTTGTGCA	59.379	43.478	23.54	9.34	44.96	4.57
438	439	3.621268	TCTTGACAGTACAAGTTGTGCAC	59.379	43.478	23.54	10.75	44.96	4.57
439	440	1.930503	TGACAGTACAAGTTGTGCACG	59.069	47.619	23.54	16.64	35.34	5.34
440	441	1.931172	GACAGTACAAGTTGTGCACGT	59.069	47.619	23.54	19.31	35.34	4.49
441	442	3.117794	GACAGTACAAGTTGTGCACGTA	58.882	45.455	23.54	4.88	35.34	3.57
442	443	3.120792	ACAGTACAAGTTGTGCACGTAG	58.879	45.455	23.54	11.36	35.34	3.51
443	444	3.181484	ACAGTACAAGTTGTGCACGTAGA	60.181	43.478	23.54	0.00	35.34	2.59
444	445	3.987868	CAGTACAAGTTGTGCACGTAGAT	59.012	43.478	23.54	0.86	35.34	1.98
445	446	5.158494	CAGTACAAGTTGTGCACGTAGATA	58.842	41.667	23.54	0.00	35.34	1.98
446	447	5.805486	CAGTACAAGTTGTGCACGTAGATAT	59.195	40.000	23.54	0.00	35.34	1.63
447	448	6.310467	CAGTACAAGTTGTGCACGTAGATATT	59.690	38.462	23.54	0.00	35.34	1.28
448	449	6.872020	AGTACAAGTTGTGCACGTAGATATTT	59.128	34.615	23.54	0.00	35.34	1.40
449	450	6.165659	ACAAGTTGTGCACGTAGATATTTC	57.834	37.500	13.13	0.00	0.00	2.17
450	451	5.932303	ACAAGTTGTGCACGTAGATATTTCT	59.068	36.000	13.13	0.00	35.90	2.52
451	452	7.094631	ACAAGTTGTGCACGTAGATATTTCTA	58.905	34.615	13.13	0.00	33.17	2.10
452	453	7.764443	ACAAGTTGTGCACGTAGATATTTCTAT	59.236	33.333	13.13	0.00	36.84	1.98
453	454	8.604035	CAAGTTGTGCACGTAGATATTTCTATT	58.396	33.333	13.13	0.00	36.84	1.73
454	455	9.811995	AAGTTGTGCACGTAGATATTTCTATTA	57.188	29.630	13.13	0.00	36.84	0.98
455	456	9.982651	AGTTGTGCACGTAGATATTTCTATTAT	57.017	29.630	13.13	0.00	36.84	1.28
556	557	9.739786	CACAGATTAAATTAACCGAAAAATTGC	57.260	29.630	0.00	0.00	0.00	3.56
557	558	9.705290	ACAGATTAAATTAACCGAAAAATTGCT	57.295	25.926	0.00	0.00	0.00	3.91
568	569	8.428186	AACCGAAAAATTGCTAATATACTCGA	57.572	30.769	0.00	0.00	0.00	4.04
569	570	7.848491	ACCGAAAAATTGCTAATATACTCGAC	58.152	34.615	0.00	0.00	0.00	4.20
570	571	7.493320	ACCGAAAAATTGCTAATATACTCGACA	59.507	33.333	0.00	0.00	0.00	4.35
571	572	8.332464	CCGAAAAATTGCTAATATACTCGACAA	58.668	33.333	0.00	0.00	0.00	3.18
572	573	9.358123	CGAAAAATTGCTAATATACTCGACAAG	57.642	33.333	0.00	0.00	0.00	3.16
576	577	9.547753	AAATTGCTAATATACTCGACAAGATGT	57.452	29.630	0.00	0.00	0.00	3.06
578	579	9.847706	ATTGCTAATATACTCGACAAGATGTAG	57.152	33.333	0.00	0.00	0.00	2.74
579	580	7.306213	TGCTAATATACTCGACAAGATGTAGC	58.694	38.462	0.00	0.00	0.00	3.58
580	581	7.040686	TGCTAATATACTCGACAAGATGTAGCA	60.041	37.037	0.00	0.00	0.00	3.49
581	582	7.971168	GCTAATATACTCGACAAGATGTAGCAT	59.029	37.037	0.00	0.00	0.00	3.79
582	583	9.847706	CTAATATACTCGACAAGATGTAGCATT	57.152	33.333	0.00	0.00	0.00	3.56
583	584	8.526218	AATATACTCGACAAGATGTAGCATTG	57.474	34.615	0.00	0.00	0.00	2.82
584	585	4.193826	ACTCGACAAGATGTAGCATTGT	57.806	40.909	0.00	0.00	39.76	2.71
585	586	4.569943	ACTCGACAAGATGTAGCATTGTT	58.430	39.130	0.00	0.00	37.29	2.83
586	587	5.720202	ACTCGACAAGATGTAGCATTGTTA	58.280	37.500	0.00	0.00	37.29	2.41
587	588	6.163476	ACTCGACAAGATGTAGCATTGTTAA	58.837	36.000	0.00	0.00	37.29	2.01
588	589	6.649141	ACTCGACAAGATGTAGCATTGTTAAA	59.351	34.615	0.00	0.00	37.29	1.52
589	590	7.172532	ACTCGACAAGATGTAGCATTGTTAAAA	59.827	33.333	0.00	0.00	37.29	1.52
590	591	7.866729	TCGACAAGATGTAGCATTGTTAAAAA	58.133	30.769	0.00	0.00	37.29	1.94
591	592	7.801315	TCGACAAGATGTAGCATTGTTAAAAAC	59.199	33.333	0.00	0.00	37.29	2.43
592	593	7.060633	CGACAAGATGTAGCATTGTTAAAAACC	59.939	37.037	0.00	0.00	37.29	3.27
593	594	7.721402	ACAAGATGTAGCATTGTTAAAAACCA	58.279	30.769	0.00	0.00	33.49	3.67
594	595	8.367156	ACAAGATGTAGCATTGTTAAAAACCAT	58.633	29.630	0.00	0.00	33.49	3.55
595	596	8.863049	CAAGATGTAGCATTGTTAAAAACCATC	58.137	33.333	0.00	0.00	0.00	3.51
596	597	8.353423	AGATGTAGCATTGTTAAAAACCATCT	57.647	30.769	0.00	0.00	32.65	2.90
597	598	8.246180	AGATGTAGCATTGTTAAAAACCATCTG	58.754	33.333	8.70	0.00	35.33	2.90
598	599	6.686630	TGTAGCATTGTTAAAAACCATCTGG	58.313	36.000	0.00	0.00	42.17	3.86
599	600	6.491745	TGTAGCATTGTTAAAAACCATCTGGA	59.508	34.615	2.55	0.00	38.94	3.86
600	601	6.610075	AGCATTGTTAAAAACCATCTGGAT	57.390	33.333	2.55	0.00	38.94	3.41
601	602	6.400568	AGCATTGTTAAAAACCATCTGGATG	58.599	36.000	2.55	3.79	38.94	3.51
602	603	5.063817	GCATTGTTAAAAACCATCTGGATGC	59.936	40.000	2.55	0.99	37.49	3.91
603	604	5.798125	TTGTTAAAAACCATCTGGATGCA	57.202	34.783	2.55	0.00	37.49	3.96
604	605	5.798125	TGTTAAAAACCATCTGGATGCAA	57.202	34.783	2.55	0.00	37.49	4.08
605	606	6.357579	TGTTAAAAACCATCTGGATGCAAT	57.642	33.333	2.55	0.00	37.49	3.56
606	607	6.397272	TGTTAAAAACCATCTGGATGCAATC	58.603	36.000	2.55	0.00	44.55	2.67
747	748	4.316205	AAAATCCTCGTGGAAACCAAAC	57.684	40.909	10.77	0.00	46.80	2.93
757	758	4.137543	GTGGAAACCAAACTGTGATCTCT	58.862	43.478	0.00	0.00	34.18	3.10
759	760	3.503748	GGAAACCAAACTGTGATCTCTGG	59.496	47.826	6.61	3.55	0.00	3.86
777	778	3.372676	GATTCACGTGCAGCGCCAG	62.373	63.158	11.67	0.00	46.11	4.85
778	779	3.881952	ATTCACGTGCAGCGCCAGA	62.882	57.895	11.67	0.00	46.11	3.86
780	781	3.425713	CACGTGCAGCGCCAGAAT	61.426	61.111	2.29	0.00	46.11	2.40
781	782	2.669569	ACGTGCAGCGCCAGAATT	60.670	55.556	2.29	0.00	46.11	2.17
782	783	2.202388	CGTGCAGCGCCAGAATTG	60.202	61.111	2.29	0.00	0.00	2.32
786	787	0.677414	TGCAGCGCCAGAATTGATCA	60.677	50.000	2.29	0.00	0.00	2.92
792	793	1.838112	GCCAGAATTGATCACACCCA	58.162	50.000	0.00	0.00	0.00	4.51
794	795	2.165030	GCCAGAATTGATCACACCCAAG	59.835	50.000	0.00	0.00	0.00	3.61
800	801	4.647564	ATTGATCACACCCAAGAGAACT	57.352	40.909	0.00	0.00	0.00	3.01
801	802	5.762179	ATTGATCACACCCAAGAGAACTA	57.238	39.130	0.00	0.00	0.00	2.24
802	803	5.560722	TTGATCACACCCAAGAGAACTAA	57.439	39.130	0.00	0.00	0.00	2.24
803	804	5.762179	TGATCACACCCAAGAGAACTAAT	57.238	39.130	0.00	0.00	0.00	1.73
804	805	6.867519	TGATCACACCCAAGAGAACTAATA	57.132	37.500	0.00	0.00	0.00	0.98
805	806	6.878317	TGATCACACCCAAGAGAACTAATAG	58.122	40.000	0.00	0.00	0.00	1.73
823	824	7.182760	ACTAATAGTAGCTATGATGGGCAGTA	58.817	38.462	0.00	0.00	0.00	2.74
828	829	4.283363	AGCTATGATGGGCAGTATTCAG	57.717	45.455	0.00	0.00	0.00	3.02
835	836	2.790433	TGGGCAGTATTCAGTTGGAAC	58.210	47.619	0.00	0.00	38.60	3.62
837	838	1.737793	GGCAGTATTCAGTTGGAACGG	59.262	52.381	0.00	0.00	38.60	4.44
838	839	2.423577	GCAGTATTCAGTTGGAACGGT	58.576	47.619	0.00	0.00	38.60	4.83
839	840	3.592059	GCAGTATTCAGTTGGAACGGTA	58.408	45.455	0.00	0.00	38.60	4.02
840	841	3.370061	GCAGTATTCAGTTGGAACGGTAC	59.630	47.826	0.00	0.00	38.60	3.34
841	842	4.817517	CAGTATTCAGTTGGAACGGTACT	58.182	43.478	0.00	0.00	38.60	2.73
842	843	5.622914	GCAGTATTCAGTTGGAACGGTACTA	60.623	44.000	0.00	0.00	38.60	1.82
843	844	6.034591	CAGTATTCAGTTGGAACGGTACTAG	58.965	44.000	0.00	0.00	38.60	2.57
844	845	3.947910	TTCAGTTGGAACGGTACTAGG	57.052	47.619	0.00	0.00	0.00	3.02
845	846	1.547372	TCAGTTGGAACGGTACTAGGC	59.453	52.381	0.00	0.00	0.00	3.93
846	847	1.549170	CAGTTGGAACGGTACTAGGCT	59.451	52.381	0.00	0.00	0.00	4.58
847	848	2.756760	CAGTTGGAACGGTACTAGGCTA	59.243	50.000	0.00	0.00	0.00	3.93
848	849	2.757314	AGTTGGAACGGTACTAGGCTAC	59.243	50.000	0.00	0.00	0.00	3.58
849	850	2.757314	GTTGGAACGGTACTAGGCTACT	59.243	50.000	0.00	0.00	0.00	2.57
852	853	4.202441	TGGAACGGTACTAGGCTACTTAG	58.798	47.826	0.00	0.00	0.00	2.18
873	874	2.650196	TGGTACACCGTACCGTGC	59.350	61.111	16.42	0.01	40.39	5.34
874	875	2.125952	GGTACACCGTACCGTGCC	60.126	66.667	13.36	5.37	37.25	5.01
892	893	3.712881	GCGGCGTGGACAGTGTTC	61.713	66.667	9.37	0.00	0.00	3.18
893	894	3.041940	CGGCGTGGACAGTGTTCC	61.042	66.667	0.00	2.05	36.03	3.62
894	895	3.041940	GGCGTGGACAGTGTTCCG	61.042	66.667	0.00	3.66	38.69	4.30
895	896	3.712881	GCGTGGACAGTGTTCCGC	61.713	66.667	17.77	17.77	42.01	5.54
918	922	2.614057	CGTCCAGTCCTTAAATGGATGC	59.386	50.000	1.30	0.00	44.59	3.91
1091	1122	0.861837	CGCTCTGCTTCGTCTTGTTT	59.138	50.000	0.00	0.00	0.00	2.83
1279	1347	1.817099	CGGGGATGCAGCTCTTCAC	60.817	63.158	0.00	0.00	0.00	3.18
1341	1409	1.368374	CTTCCCCAACTACCCCAAGA	58.632	55.000	0.00	0.00	0.00	3.02
1352	1420	2.757077	CCCAAGAGCCCCGAGTTT	59.243	61.111	0.00	0.00	0.00	2.66
1598	1692	2.540516	CACGTTCGACATTACAACCACA	59.459	45.455	0.00	0.00	0.00	4.17
1686	1780	0.832626	AGATGACGCCATGGATGTGA	59.167	50.000	18.40	7.63	32.09	3.58
1689	1783	0.530431	TGACGCCATGGATGTGATCG	60.530	55.000	18.40	10.18	0.00	3.69
1728	1822	2.280797	TGTCGTGGTGGAAGCTGC	60.281	61.111	0.00	0.00	33.76	5.25
1767	1861	3.768185	TACGAGCGGAAGATGGCGC	62.768	63.158	0.00	0.00	0.00	6.53
1856	1953	3.607661	GGCGGGATCGAGGACTCC	61.608	72.222	0.00	0.00	39.00	3.85
1880	1978	2.393646	GACCTGCTCTCCTCCTACATT	58.606	52.381	0.00	0.00	0.00	2.71
1892	1993	1.129251	TCCTACATTGACGACGACGAC	59.871	52.381	15.32	8.68	42.66	4.34
2247	2369	2.370445	CGGCCAGGGGACAAGATCT	61.370	63.158	2.24	0.00	0.00	2.75
2272	2394	2.421739	GCTGTACGCGATGGGGAT	59.578	61.111	15.93	0.00	0.00	3.85
2504	2626	1.067060	CACGTCATCGAGCCCAAGATA	59.933	52.381	0.00	0.00	40.62	1.98
2551	2673	2.821969	GCTTCAAAGCCAGGATCAAGAA	59.178	45.455	3.27	0.00	46.20	2.52
2567	2689	3.008330	CAAGAAGAGGCAGGTGATGAAG	58.992	50.000	0.00	0.00	0.00	3.02
2569	2691	3.113824	AGAAGAGGCAGGTGATGAAGAT	58.886	45.455	0.00	0.00	0.00	2.40
2632	2756	1.476891	TGTCTCCATCGTAACAGGCTC	59.523	52.381	0.00	0.00	0.00	4.70
2757	2881	3.937874	CGTTTGGTTTACACACGCTAAA	58.062	40.909	0.00	0.00	44.93	1.85
2759	2883	4.660105	GTTTGGTTTACACACGCTAAACA	58.340	39.130	7.56	0.00	36.28	2.83
2790	2914	4.324254	CCAGGTACTTGTATGTTGATGGGT	60.324	45.833	4.10	0.00	34.60	4.51
2798	2922	8.055279	ACTTGTATGTTGATGGGTCTTTTATG	57.945	34.615	0.00	0.00	0.00	1.90
2799	2923	7.669722	ACTTGTATGTTGATGGGTCTTTTATGT	59.330	33.333	0.00	0.00	0.00	2.29
2814	2938	8.555361	GGTCTTTTATGTGCTTTCATAGAGATC	58.445	37.037	0.00	0.00	32.53	2.75
2829	2953	7.796838	TCATAGAGATCGCGAAAAATAATTGG	58.203	34.615	15.24	0.00	0.00	3.16
2856	2980	7.655328	GTCAAAATAAATCAACATTGTGGGACA	59.345	33.333	0.00	0.00	0.00	4.02
2864	2988	4.398988	TCAACATTGTGGGACAATCTATGC	59.601	41.667	0.00	0.00	44.91	3.14
2866	2990	3.696051	ACATTGTGGGACAATCTATGCAC	59.304	43.478	0.00	0.00	44.91	4.57
2914	3039	5.846994	CGCTCTAAATATACGAGTGACAGTC	59.153	44.000	0.00	0.00	37.45	3.51
2970	3095	8.319057	TGAGCTAATAAAGGAAGGATTGTAGA	57.681	34.615	0.00	0.00	0.00	2.59
3032	3157	5.640158	AAGGATTATGGGTAAATCGGTGA	57.360	39.130	0.00	0.00	34.74	4.02
3044	3169	9.075678	TGGGTAAATCGGTGAAATAACTAAAAA	57.924	29.630	0.00	0.00	0.00	1.94
3133	3259	7.348033	TGGGTAAATCGGTGGAATAACTAAAT	58.652	34.615	0.00	0.00	0.00	1.40
3190	3317	9.682465	AAGGATTTGAGGTAAAAAGTAGGATAC	57.318	33.333	0.00	0.00	43.47	2.24
3240	3376	6.546403	GGGGCTACTAAATTAGAAAAGGAAGG	59.454	42.308	7.06	0.00	0.00	3.46
3289	3425	5.197451	AGGGCGTCATGGTAATTAATGAAA	58.803	37.500	2.14	0.00	34.70	2.69
3343	3479	8.940397	ATTATACTTAAATGGAATCAGTGGGG	57.060	34.615	0.00	0.00	0.00	4.96
3366	3502	4.830600	GGATTATCCCCGGCAAAGAAAATA	59.169	41.667	0.00	0.00	0.00	1.40
3373	3509	4.141959	CCCCGGCAAAGAAAATATGAACAT	60.142	41.667	0.00	0.00	0.00	2.71
3388	3524	4.597404	TGAACATGGCTAAATTGCAACA	57.403	36.364	0.00	0.00	34.04	3.33
3424	3560	8.500837	TGTTCATTTTGTAAAAGAATGCTACG	57.499	30.769	0.00	0.00	32.28	3.51
3437	3573	0.516877	TGCTACGTTGCAGCATGTTC	59.483	50.000	20.65	0.00	43.90	3.18
3441	3577	3.120338	GCTACGTTGCAGCATGTTCTTTA	60.120	43.478	17.16	0.00	39.31	1.85
3442	3578	4.437390	GCTACGTTGCAGCATGTTCTTTAT	60.437	41.667	17.16	0.00	39.31	1.40
3443	3579	5.220586	GCTACGTTGCAGCATGTTCTTTATA	60.221	40.000	17.16	0.00	39.31	0.98
3444	3580	5.221891	ACGTTGCAGCATGTTCTTTATAG	57.778	39.130	0.00	0.00	39.31	1.31
3445	3581	4.695455	ACGTTGCAGCATGTTCTTTATAGT	59.305	37.500	0.00	0.00	39.31	2.12
3446	3582	5.181245	ACGTTGCAGCATGTTCTTTATAGTT	59.819	36.000	0.00	0.00	39.31	2.24
3447	3583	6.370442	ACGTTGCAGCATGTTCTTTATAGTTA	59.630	34.615	0.00	0.00	39.31	2.24
3448	3584	7.094975	ACGTTGCAGCATGTTCTTTATAGTTAA	60.095	33.333	0.00	0.00	39.31	2.01
3449	3585	7.910162	CGTTGCAGCATGTTCTTTATAGTTAAT	59.090	33.333	0.00	0.00	39.31	1.40
3460	3596	7.350744	TCTTTATAGTTAATCCGGTGCTGTA	57.649	36.000	0.00	0.00	0.00	2.74
3470	3606	3.568443	TCCGGTGCTGTAGGACATTATA	58.432	45.455	0.00	0.00	38.19	0.98
3475	3611	5.451381	CGGTGCTGTAGGACATTATACTTGA	60.451	44.000	5.90	0.00	38.19	3.02
3540	3676	9.950496	ATGTGCTAGTAATAATAAAGGATGGAG	57.050	33.333	0.00	0.00	0.00	3.86
3541	3677	8.375506	TGTGCTAGTAATAATAAAGGATGGAGG	58.624	37.037	0.00	0.00	0.00	4.30
3542	3678	7.334671	GTGCTAGTAATAATAAAGGATGGAGGC	59.665	40.741	0.00	0.00	0.00	4.70
3543	3679	7.237679	TGCTAGTAATAATAAAGGATGGAGGCT	59.762	37.037	0.00	0.00	0.00	4.58
3544	3680	8.103935	GCTAGTAATAATAAAGGATGGAGGCTT	58.896	37.037	0.00	0.00	0.00	4.35
3546	3682	8.926092	AGTAATAATAAAGGATGGAGGCTTTC	57.074	34.615	0.00	0.00	0.00	2.62
3547	3683	8.502738	AGTAATAATAAAGGATGGAGGCTTTCA	58.497	33.333	0.00	0.00	0.00	2.69
3548	3684	9.301897	GTAATAATAAAGGATGGAGGCTTTCAT	57.698	33.333	0.00	0.00	0.00	2.57
3550	3686	9.525826	AATAATAAAGGATGGAGGCTTTCATAG	57.474	33.333	0.00	0.00	0.00	2.23
3551	3687	4.870021	AAAGGATGGAGGCTTTCATAGT	57.130	40.909	0.00	0.00	0.00	2.12
3552	3688	4.870021	AAGGATGGAGGCTTTCATAGTT	57.130	40.909	0.00	0.00	0.00	2.24
3553	3689	4.429854	AGGATGGAGGCTTTCATAGTTC	57.570	45.455	0.00	0.00	0.00	3.01
3554	3690	4.043596	AGGATGGAGGCTTTCATAGTTCT	58.956	43.478	0.00	0.00	0.00	3.01
3555	3691	4.476479	AGGATGGAGGCTTTCATAGTTCTT	59.524	41.667	0.00	0.00	0.00	2.52
3556	3692	4.819088	GGATGGAGGCTTTCATAGTTCTTC	59.181	45.833	0.00	0.00	0.00	2.87
3557	3693	4.908601	TGGAGGCTTTCATAGTTCTTCA	57.091	40.909	0.00	0.00	0.00	3.02
3558	3694	5.441718	TGGAGGCTTTCATAGTTCTTCAT	57.558	39.130	0.00	0.00	0.00	2.57
3559	3695	5.431765	TGGAGGCTTTCATAGTTCTTCATC	58.568	41.667	0.00	0.00	0.00	2.92
3560	3696	4.819088	GGAGGCTTTCATAGTTCTTCATCC	59.181	45.833	0.00	0.00	0.00	3.51
3561	3697	4.446371	AGGCTTTCATAGTTCTTCATCCG	58.554	43.478	0.00	0.00	0.00	4.18
3562	3698	4.080863	AGGCTTTCATAGTTCTTCATCCGT	60.081	41.667	0.00	0.00	0.00	4.69
3563	3699	4.271291	GGCTTTCATAGTTCTTCATCCGTC	59.729	45.833	0.00	0.00	0.00	4.79
3564	3700	4.026475	GCTTTCATAGTTCTTCATCCGTCG	60.026	45.833	0.00	0.00	0.00	5.12
3565	3701	4.713824	TTCATAGTTCTTCATCCGTCGT	57.286	40.909	0.00	0.00	0.00	4.34
3566	3702	4.288670	TCATAGTTCTTCATCCGTCGTC	57.711	45.455	0.00	0.00	0.00	4.20
3567	3703	2.819422	TAGTTCTTCATCCGTCGTCG	57.181	50.000	0.00	0.00	0.00	5.12
3568	3704	0.879765	AGTTCTTCATCCGTCGTCGT	59.120	50.000	0.71	0.00	35.01	4.34
3569	3705	1.268899	AGTTCTTCATCCGTCGTCGTT	59.731	47.619	0.71	0.00	35.01	3.85
3570	3706	2.056577	GTTCTTCATCCGTCGTCGTTT	58.943	47.619	0.71	0.00	35.01	3.60
3571	3707	2.427232	TCTTCATCCGTCGTCGTTTT	57.573	45.000	0.71	0.00	35.01	2.43
3572	3708	3.557577	TCTTCATCCGTCGTCGTTTTA	57.442	42.857	0.71	0.00	35.01	1.52
3573	3709	4.100707	TCTTCATCCGTCGTCGTTTTAT	57.899	40.909	0.71	0.00	35.01	1.40
3574	3710	5.233957	TCTTCATCCGTCGTCGTTTTATA	57.766	39.130	0.71	0.00	35.01	0.98
3575	3711	5.824429	TCTTCATCCGTCGTCGTTTTATAT	58.176	37.500	0.71	0.00	35.01	0.86
3576	3712	6.267817	TCTTCATCCGTCGTCGTTTTATATT	58.732	36.000	0.71	0.00	35.01	1.28
3577	3713	6.415867	TCTTCATCCGTCGTCGTTTTATATTC	59.584	38.462	0.71	0.00	35.01	1.75
3578	3714	4.671964	TCATCCGTCGTCGTTTTATATTCG	59.328	41.667	0.71	0.00	35.01	3.34
3579	3715	4.014847	TCCGTCGTCGTTTTATATTCGT	57.985	40.909	0.71	0.00	35.01	3.85
3580	3716	4.028383	TCCGTCGTCGTTTTATATTCGTC	58.972	43.478	0.71	0.00	35.01	4.20
3581	3717	3.785521	CCGTCGTCGTTTTATATTCGTCA	59.214	43.478	0.71	0.00	35.01	4.35
3582	3718	4.262743	CCGTCGTCGTTTTATATTCGTCAA	59.737	41.667	0.71	0.00	35.01	3.18
3583	3719	5.052172	CCGTCGTCGTTTTATATTCGTCAAT	60.052	40.000	0.71	0.00	35.01	2.57
3584	3720	6.397243	CGTCGTCGTTTTATATTCGTCAATT	58.603	36.000	0.00	0.00	0.00	2.32
3585	3721	6.890870	CGTCGTCGTTTTATATTCGTCAATTT	59.109	34.615	0.00	0.00	0.00	1.82
3586	3722	7.420485	CGTCGTCGTTTTATATTCGTCAATTTT	59.580	33.333	0.00	0.00	0.00	1.82
3587	3723	8.502058	GTCGTCGTTTTATATTCGTCAATTTTG	58.498	33.333	0.00	0.00	0.00	2.44
3588	3724	8.222433	TCGTCGTTTTATATTCGTCAATTTTGT	58.778	29.630	0.00	0.00	0.00	2.83
3589	3725	8.294473	CGTCGTTTTATATTCGTCAATTTTGTG	58.706	33.333	0.00	0.00	0.00	3.33
3590	3726	9.109533	GTCGTTTTATATTCGTCAATTTTGTGT	57.890	29.630	0.00	0.00	0.00	3.72
3591	3727	9.666626	TCGTTTTATATTCGTCAATTTTGTGTT	57.333	25.926	0.00	0.00	0.00	3.32

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
4	5	0.320508	GAAGAGACGTGGGTTGGACC	60.321	60.000	0.00	0.00	37.60	4.46
5	6	0.391597	TGAAGAGACGTGGGTTGGAC	59.608	55.000	0.00	0.00	0.00	4.02
6	7	0.391597	GTGAAGAGACGTGGGTTGGA	59.608	55.000	0.00	0.00	0.00	3.53
7	8	0.393077	AGTGAAGAGACGTGGGTTGG	59.607	55.000	0.00	0.00	0.00	3.77
8	9	1.784525	GAGTGAAGAGACGTGGGTTG	58.215	55.000	0.00	0.00	0.00	3.77
9	10	0.314302	CGAGTGAAGAGACGTGGGTT	59.686	55.000	0.00	0.00	0.00	4.11
10	11	1.524863	CCGAGTGAAGAGACGTGGGT	61.525	60.000	0.00	0.00	0.00	4.51
11	12	1.213013	CCGAGTGAAGAGACGTGGG	59.787	63.158	0.00	0.00	0.00	4.61
12	13	1.444553	GCCGAGTGAAGAGACGTGG	60.445	63.158	0.00	0.00	0.00	4.94
13	14	1.444553	GGCCGAGTGAAGAGACGTG	60.445	63.158	0.00	0.00	0.00	4.49
14	15	1.901948	TGGCCGAGTGAAGAGACGT	60.902	57.895	0.00	0.00	0.00	4.34
15	16	1.444553	GTGGCCGAGTGAAGAGACG	60.445	63.158	0.00	0.00	0.00	4.18
16	17	1.444553	CGTGGCCGAGTGAAGAGAC	60.445	63.158	0.00	0.00	35.63	3.36
17	18	2.962569	CGTGGCCGAGTGAAGAGA	59.037	61.111	0.00	0.00	35.63	3.10
18	19	2.811317	GCGTGGCCGAGTGAAGAG	60.811	66.667	0.00	0.00	35.63	2.85
19	20	4.373116	GGCGTGGCCGAGTGAAGA	62.373	66.667	0.00	0.00	39.62	2.87
37	38	2.029380	TGACCGACGCCTCCAATATATG	60.029	50.000	0.00	0.00	0.00	1.78
38	39	2.244695	TGACCGACGCCTCCAATATAT	58.755	47.619	0.00	0.00	0.00	0.86
39	40	1.694844	TGACCGACGCCTCCAATATA	58.305	50.000	0.00	0.00	0.00	0.86
40	41	0.828022	TTGACCGACGCCTCCAATAT	59.172	50.000	0.00	0.00	0.00	1.28
41	42	0.108520	GTTGACCGACGCCTCCAATA	60.109	55.000	0.00	0.00	0.00	1.90
42	43	1.375523	GTTGACCGACGCCTCCAAT	60.376	57.895	0.00	0.00	0.00	3.16
43	44	2.029964	GTTGACCGACGCCTCCAA	59.970	61.111	0.00	0.00	0.00	3.53
44	45	3.998672	GGTTGACCGACGCCTCCA	61.999	66.667	0.00	0.00	0.00	3.86
45	46	4.754667	GGGTTGACCGACGCCTCC	62.755	72.222	0.00	0.00	36.71	4.30
46	47	2.280823	CTAGGGTTGACCGACGCCTC	62.281	65.000	0.00	0.00	46.96	4.70
47	48	2.283388	TAGGGTTGACCGACGCCT	60.283	61.111	0.00	0.00	46.96	5.52
48	49	2.183555	CTAGGGTTGACCGACGCC	59.816	66.667	0.00	0.00	46.96	5.68
49	50	2.508663	GCTAGGGTTGACCGACGC	60.509	66.667	0.00	0.00	46.96	5.19
50	51	2.183555	GGCTAGGGTTGACCGACG	59.816	66.667	0.00	0.00	46.96	5.12
54	55	3.712907	TGGCGGCTAGGGTTGACC	61.713	66.667	11.43	0.00	40.67	4.02
55	56	2.436115	GTGGCGGCTAGGGTTGAC	60.436	66.667	11.43	0.00	0.00	3.18
56	57	2.058125	TTTGTGGCGGCTAGGGTTGA	62.058	55.000	11.43	0.00	0.00	3.18
57	58	1.586154	CTTTGTGGCGGCTAGGGTTG	61.586	60.000	11.43	0.00	0.00	3.77
58	59	1.303317	CTTTGTGGCGGCTAGGGTT	60.303	57.895	11.43	0.00	0.00	4.11
59	60	1.774894	TTCTTTGTGGCGGCTAGGGT	61.775	55.000	11.43	0.00	0.00	4.34
60	61	1.002624	TTCTTTGTGGCGGCTAGGG	60.003	57.895	11.43	0.00	0.00	3.53
61	62	0.605319	TGTTCTTTGTGGCGGCTAGG	60.605	55.000	11.43	0.00	0.00	3.02
62	63	1.453155	ATGTTCTTTGTGGCGGCTAG	58.547	50.000	11.43	2.62	0.00	3.42
63	64	2.772077	TATGTTCTTTGTGGCGGCTA	57.228	45.000	11.43	0.00	0.00	3.93
64	65	2.017049	GATATGTTCTTTGTGGCGGCT	58.983	47.619	11.43	0.00	0.00	5.52
65	66	1.742831	TGATATGTTCTTTGTGGCGGC	59.257	47.619	0.00	0.00	0.00	6.53
66	67	2.746904	TGTGATATGTTCTTTGTGGCGG	59.253	45.455	0.00	0.00	0.00	6.13
67	68	4.333649	AGATGTGATATGTTCTTTGTGGCG	59.666	41.667	0.00	0.00	0.00	5.69
68	69	5.575957	CAGATGTGATATGTTCTTTGTGGC	58.424	41.667	0.00	0.00	0.00	5.01
69	70	5.356190	AGCAGATGTGATATGTTCTTTGTGG	59.644	40.000	0.00	0.00	0.00	4.17
70	71	6.432607	AGCAGATGTGATATGTTCTTTGTG	57.567	37.500	0.00	0.00	0.00	3.33
71	72	5.587844	GGAGCAGATGTGATATGTTCTTTGT	59.412	40.000	0.00	0.00	33.12	2.83
72	73	5.587443	TGGAGCAGATGTGATATGTTCTTTG	59.413	40.000	0.00	0.00	33.12	2.77
73	74	5.587844	GTGGAGCAGATGTGATATGTTCTTT	59.412	40.000	0.00	0.00	33.12	2.52
74	75	5.121811	GTGGAGCAGATGTGATATGTTCTT	58.878	41.667	0.00	0.00	33.12	2.52
75	76	4.701765	GTGGAGCAGATGTGATATGTTCT	58.298	43.478	0.00	0.00	33.12	3.01
76	77	3.492383	CGTGGAGCAGATGTGATATGTTC	59.508	47.826	0.00	0.00	31.99	3.18
77	78	3.461061	CGTGGAGCAGATGTGATATGTT	58.539	45.455	0.00	0.00	0.00	2.71
78	79	2.224137	CCGTGGAGCAGATGTGATATGT	60.224	50.000	0.00	0.00	0.00	2.29
79	80	2.224137	ACCGTGGAGCAGATGTGATATG	60.224	50.000	0.00	0.00	0.00	1.78
80	81	2.036475	GACCGTGGAGCAGATGTGATAT	59.964	50.000	0.00	0.00	0.00	1.63
81	82	1.409064	GACCGTGGAGCAGATGTGATA	59.591	52.381	0.00	0.00	0.00	2.15
82	83	0.176680	GACCGTGGAGCAGATGTGAT	59.823	55.000	0.00	0.00	0.00	3.06
83	84	1.184970	TGACCGTGGAGCAGATGTGA	61.185	55.000	0.00	0.00	0.00	3.58
84	85	1.016130	GTGACCGTGGAGCAGATGTG	61.016	60.000	0.00	0.00	0.00	3.21
85	86	1.293498	GTGACCGTGGAGCAGATGT	59.707	57.895	0.00	0.00	0.00	3.06
86	87	1.807165	CGTGACCGTGGAGCAGATG	60.807	63.158	0.00	0.00	0.00	2.90
87	88	2.573869	CGTGACCGTGGAGCAGAT	59.426	61.111	0.00	0.00	0.00	2.90
88	89	3.680786	CCGTGACCGTGGAGCAGA	61.681	66.667	0.00	0.00	0.00	4.26
89	90	3.916392	GACCGTGACCGTGGAGCAG	62.916	68.421	0.00	0.00	0.00	4.24
90	91	3.986006	GACCGTGACCGTGGAGCA	61.986	66.667	0.00	0.00	0.00	4.26
91	92	3.916392	CTGACCGTGACCGTGGAGC	62.916	68.421	0.00	0.00	0.00	4.70
92	93	2.258591	CTGACCGTGACCGTGGAG	59.741	66.667	0.00	0.00	0.00	3.86
93	94	2.520020	ACTGACCGTGACCGTGGA	60.520	61.111	0.00	0.00	0.00	4.02
94	95	2.049433	GACTGACCGTGACCGTGG	60.049	66.667	0.00	0.00	0.00	4.94
95	96	2.049433	GGACTGACCGTGACCGTG	60.049	66.667	0.00	0.00	0.00	4.94
96	97	1.397390	AAAGGACTGACCGTGACCGT	61.397	55.000	0.00	0.00	44.74	4.83
97	98	0.249741	AAAAGGACTGACCGTGACCG	60.250	55.000	0.00	0.00	44.74	4.79
98	99	1.226746	CAAAAGGACTGACCGTGACC	58.773	55.000	0.00	0.00	44.74	4.02
99	100	0.586802	GCAAAAGGACTGACCGTGAC	59.413	55.000	2.85	0.00	44.74	3.67
100	101	0.468226	AGCAAAAGGACTGACCGTGA	59.532	50.000	0.00	0.00	44.74	4.35
101	102	0.588252	CAGCAAAAGGACTGACCGTG	59.412	55.000	0.00	0.00	44.74	4.94
102	103	1.166531	GCAGCAAAAGGACTGACCGT	61.167	55.000	0.00	0.00	44.74	4.83
103	104	1.576421	GCAGCAAAAGGACTGACCG	59.424	57.895	0.00	0.00	44.74	4.79
104	105	1.856265	CGGCAGCAAAAGGACTGACC	61.856	60.000	0.00	0.00	38.82	4.02
105	106	1.576421	CGGCAGCAAAAGGACTGAC	59.424	57.895	0.00	0.00	38.64	3.51
106	107	2.260869	GCGGCAGCAAAAGGACTGA	61.261	57.895	3.18	0.00	44.35	3.41
107	108	2.256461	GCGGCAGCAAAAGGACTG	59.744	61.111	3.18	0.00	44.35	3.51
121	122	4.626081	GGATGGGATCACCGGCGG	62.626	72.222	27.06	27.06	44.64	6.13
122	123	4.626081	GGGATGGGATCACCGGCG	62.626	72.222	0.00	0.00	44.64	6.46
123	124	4.626081	CGGGATGGGATCACCGGC	62.626	72.222	0.00	0.00	44.64	6.13
124	125	2.660258	GAACGGGATGGGATCACCGG	62.660	65.000	0.00	0.00	43.11	5.28
125	126	1.227556	GAACGGGATGGGATCACCG	60.228	63.158	0.00	0.00	44.64	4.94
126	127	0.463833	GTGAACGGGATGGGATCACC	60.464	60.000	0.00	0.00	35.51	4.02
127	128	0.463833	GGTGAACGGGATGGGATCAC	60.464	60.000	0.00	0.00	39.65	3.06
128	129	1.912220	GGTGAACGGGATGGGATCA	59.088	57.895	0.00	0.00	0.00	2.92
129	130	1.227556	CGGTGAACGGGATGGGATC	60.228	63.158	0.00	0.00	39.42	3.36
130	131	2.908015	CGGTGAACGGGATGGGAT	59.092	61.111	0.00	0.00	39.42	3.85
131	132	4.090588	GCGGTGAACGGGATGGGA	62.091	66.667	0.00	0.00	44.51	4.37
146	147	1.058748	CTCATTAACCGTGTGCGCG	59.941	57.895	0.00	0.00	36.67	6.86
147	148	0.370273	CTCTCATTAACCGTGTGCGC	59.630	55.000	0.00	0.00	36.67	6.09
148	149	1.920574	CTCTCTCATTAACCGTGTGCG	59.079	52.381	0.00	0.00	37.95	5.34
149	150	2.960819	ACTCTCTCATTAACCGTGTGC	58.039	47.619	0.00	0.00	0.00	4.57
150	151	5.312120	ACTACTCTCTCATTAACCGTGTG	57.688	43.478	0.00	0.00	0.00	3.82
151	152	4.398673	GGACTACTCTCTCATTAACCGTGT	59.601	45.833	0.00	0.00	0.00	4.49
152	153	4.641094	AGGACTACTCTCTCATTAACCGTG	59.359	45.833	0.00	0.00	0.00	4.94
153	154	4.857679	AGGACTACTCTCTCATTAACCGT	58.142	43.478	0.00	0.00	0.00	4.83
154	155	4.276431	GGAGGACTACTCTCTCATTAACCG	59.724	50.000	0.00	0.00	45.83	4.44
155	156	4.276431	CGGAGGACTACTCTCTCATTAACC	59.724	50.000	0.00	0.00	45.83	2.85
156	157	5.124645	TCGGAGGACTACTCTCTCATTAAC	58.875	45.833	0.00	0.00	45.83	2.01
157	158	5.369409	TCGGAGGACTACTCTCTCATTAA	57.631	43.478	0.00	0.00	45.83	1.40
158	159	5.369409	TTCGGAGGACTACTCTCTCATTA	57.631	43.478	0.00	0.00	45.83	1.90
159	160	3.935818	TCGGAGGACTACTCTCTCATT	57.064	47.619	0.00	0.00	45.83	2.57
160	161	3.935818	TTCGGAGGACTACTCTCTCAT	57.064	47.619	0.00	0.00	45.83	2.90
161	162	3.244805	TGTTTCGGAGGACTACTCTCTCA	60.245	47.826	0.00	0.00	45.83	3.27
162	163	3.127376	GTGTTTCGGAGGACTACTCTCTC	59.873	52.174	0.00	0.00	45.83	3.20
163	164	3.083293	GTGTTTCGGAGGACTACTCTCT	58.917	50.000	0.00	0.00	45.83	3.10
164	165	3.083293	AGTGTTTCGGAGGACTACTCTC	58.917	50.000	0.00	0.00	45.83	3.20
165	166	2.820787	CAGTGTTTCGGAGGACTACTCT	59.179	50.000	0.00	0.00	45.83	3.24
166	167	2.094649	CCAGTGTTTCGGAGGACTACTC	60.095	54.545	0.00	0.00	45.84	2.59
167	168	1.893801	CCAGTGTTTCGGAGGACTACT	59.106	52.381	0.00	0.00	0.00	2.57
168	169	1.672145	GCCAGTGTTTCGGAGGACTAC	60.672	57.143	0.00	0.00	0.00	2.73
169	170	0.606604	GCCAGTGTTTCGGAGGACTA	59.393	55.000	0.00	0.00	0.00	2.59
170	171	1.122019	AGCCAGTGTTTCGGAGGACT	61.122	55.000	0.00	0.00	0.00	3.85
171	172	0.670854	GAGCCAGTGTTTCGGAGGAC	60.671	60.000	0.00	0.00	0.00	3.85
172	173	0.832135	AGAGCCAGTGTTTCGGAGGA	60.832	55.000	0.00	0.00	0.00	3.71
173	174	0.390472	GAGAGCCAGTGTTTCGGAGG	60.390	60.000	0.00	0.00	0.00	4.30
174	175	0.390472	GGAGAGCCAGTGTTTCGGAG	60.390	60.000	0.00	0.00	0.00	4.63
175	176	1.118965	TGGAGAGCCAGTGTTTCGGA	61.119	55.000	0.00	0.00	39.92	4.55
176	177	1.371183	TGGAGAGCCAGTGTTTCGG	59.629	57.895	0.00	0.00	39.92	4.30
185	186	1.751351	CGTACAGAATCTGGAGAGCCA	59.249	52.381	15.38	0.00	43.47	4.75
186	187	1.067821	CCGTACAGAATCTGGAGAGCC	59.932	57.143	15.38	0.00	35.51	4.70
187	188	1.067821	CCCGTACAGAATCTGGAGAGC	59.932	57.143	15.38	0.00	35.51	4.09
188	189	2.621055	CTCCCGTACAGAATCTGGAGAG	59.379	54.545	15.38	5.57	41.51	3.20
189	190	2.656002	CTCCCGTACAGAATCTGGAGA	58.344	52.381	15.38	0.00	41.51	3.71
190	191	1.683917	CCTCCCGTACAGAATCTGGAG	59.316	57.143	15.38	10.48	39.25	3.86
191	192	1.688311	CCCTCCCGTACAGAATCTGGA	60.688	57.143	15.38	2.37	35.51	3.86
192	193	0.753262	CCCTCCCGTACAGAATCTGG	59.247	60.000	15.38	0.00	35.51	3.86
193	194	1.683917	CTCCCTCCCGTACAGAATCTG	59.316	57.143	8.98	8.98	37.52	2.90
194	195	1.411787	CCTCCCTCCCGTACAGAATCT	60.412	57.143	0.00	0.00	0.00	2.40
195	196	1.041437	CCTCCCTCCCGTACAGAATC	58.959	60.000	0.00	0.00	0.00	2.52
196	197	1.049289	GCCTCCCTCCCGTACAGAAT	61.049	60.000	0.00	0.00	0.00	2.40
197	198	1.684734	GCCTCCCTCCCGTACAGAA	60.685	63.158	0.00	0.00	0.00	3.02
198	199	2.043248	GCCTCCCTCCCGTACAGA	60.043	66.667	0.00	0.00	0.00	3.41
199	200	1.338136	ATTGCCTCCCTCCCGTACAG	61.338	60.000	0.00	0.00	0.00	2.74
200	201	0.912487	AATTGCCTCCCTCCCGTACA	60.912	55.000	0.00	0.00	0.00	2.90
201	202	1.070289	CTAATTGCCTCCCTCCCGTAC	59.930	57.143	0.00	0.00	0.00	3.67
202	203	1.420430	CTAATTGCCTCCCTCCCGTA	58.580	55.000	0.00	0.00	0.00	4.02
203	204	1.345715	CCTAATTGCCTCCCTCCCGT	61.346	60.000	0.00	0.00	0.00	5.28
204	205	1.345715	ACCTAATTGCCTCCCTCCCG	61.346	60.000	0.00	0.00	0.00	5.14
205	206	0.927029	AACCTAATTGCCTCCCTCCC	59.073	55.000	0.00	0.00	0.00	4.30
206	207	2.828661	AAACCTAATTGCCTCCCTCC	57.171	50.000	0.00	0.00	0.00	4.30
207	208	3.832490	ACAAAAACCTAATTGCCTCCCTC	59.168	43.478	0.00	0.00	0.00	4.30
208	209	3.578282	CACAAAAACCTAATTGCCTCCCT	59.422	43.478	0.00	0.00	0.00	4.20
209	210	3.576550	TCACAAAAACCTAATTGCCTCCC	59.423	43.478	0.00	0.00	0.00	4.30
210	211	4.864704	TCACAAAAACCTAATTGCCTCC	57.135	40.909	0.00	0.00	0.00	4.30
211	212	4.686091	GCTTCACAAAAACCTAATTGCCTC	59.314	41.667	0.00	0.00	0.00	4.70
212	213	4.631131	GCTTCACAAAAACCTAATTGCCT	58.369	39.130	0.00	0.00	0.00	4.75
213	214	3.428534	CGCTTCACAAAAACCTAATTGCC	59.571	43.478	0.00	0.00	0.00	4.52
214	215	4.148174	GTCGCTTCACAAAAACCTAATTGC	59.852	41.667	0.00	0.00	0.00	3.56
215	216	5.399301	CAGTCGCTTCACAAAAACCTAATTG	59.601	40.000	0.00	0.00	0.00	2.32
216	217	5.067283	ACAGTCGCTTCACAAAAACCTAATT	59.933	36.000	0.00	0.00	0.00	1.40
217	218	4.578928	ACAGTCGCTTCACAAAAACCTAAT	59.421	37.500	0.00	0.00	0.00	1.73
218	219	3.942748	ACAGTCGCTTCACAAAAACCTAA	59.057	39.130	0.00	0.00	0.00	2.69
219	220	3.537580	ACAGTCGCTTCACAAAAACCTA	58.462	40.909	0.00	0.00	0.00	3.08
220	221	2.365582	ACAGTCGCTTCACAAAAACCT	58.634	42.857	0.00	0.00	0.00	3.50
221	222	2.844122	ACAGTCGCTTCACAAAAACC	57.156	45.000	0.00	0.00	0.00	3.27
222	223	3.717404	CGTAACAGTCGCTTCACAAAAAC	59.283	43.478	0.00	0.00	0.00	2.43
223	224	3.930618	CGTAACAGTCGCTTCACAAAAA	58.069	40.909	0.00	0.00	0.00	1.94
224	225	3.579147	CGTAACAGTCGCTTCACAAAA	57.421	42.857	0.00	0.00	0.00	2.44
234	235	1.396543	GAGCAGTCGCGTAACAGTCG	61.397	60.000	5.77	0.00	45.49	4.18
235	236	0.386858	TGAGCAGTCGCGTAACAGTC	60.387	55.000	5.77	0.00	45.49	3.51
236	237	0.663568	GTGAGCAGTCGCGTAACAGT	60.664	55.000	5.77	0.00	45.49	3.55
237	238	0.387367	AGTGAGCAGTCGCGTAACAG	60.387	55.000	5.77	0.00	45.49	3.16
238	239	0.663269	CAGTGAGCAGTCGCGTAACA	60.663	55.000	5.77	0.00	45.49	2.41
239	240	1.945776	GCAGTGAGCAGTCGCGTAAC	61.946	60.000	5.77	0.00	45.49	2.50
240	241	1.733041	GCAGTGAGCAGTCGCGTAA	60.733	57.895	5.77	0.00	45.49	3.18
241	242	2.126463	GCAGTGAGCAGTCGCGTA	60.126	61.111	5.77	0.00	45.49	4.42
250	251	3.112709	GGACGAACGGCAGTGAGC	61.113	66.667	1.79	0.00	44.65	4.26
251	252	2.022129	GTGGACGAACGGCAGTGAG	61.022	63.158	1.79	0.00	0.00	3.51
252	253	2.028484	GTGGACGAACGGCAGTGA	59.972	61.111	1.79	0.00	0.00	3.41
253	254	1.626654	GATGTGGACGAACGGCAGTG	61.627	60.000	1.79	0.00	0.00	3.66
254	255	1.374252	GATGTGGACGAACGGCAGT	60.374	57.895	1.79	0.00	0.00	4.40
255	256	2.100631	GGATGTGGACGAACGGCAG	61.101	63.158	1.79	0.00	0.00	4.85
256	257	2.047655	GGATGTGGACGAACGGCA	60.048	61.111	1.79	0.00	0.00	5.69
257	258	2.047655	TGGATGTGGACGAACGGC	60.048	61.111	0.00	0.00	0.00	5.68
258	259	1.014044	CAGTGGATGTGGACGAACGG	61.014	60.000	0.00	0.00	0.00	4.44
259	260	1.626654	GCAGTGGATGTGGACGAACG	61.627	60.000	0.00	0.00	0.00	3.95
260	261	0.602638	TGCAGTGGATGTGGACGAAC	60.603	55.000	0.00	0.00	0.00	3.95
261	262	0.324614	ATGCAGTGGATGTGGACGAA	59.675	50.000	0.00	0.00	0.00	3.85
262	263	0.324614	AATGCAGTGGATGTGGACGA	59.675	50.000	0.00	0.00	0.00	4.20
263	264	0.448990	CAATGCAGTGGATGTGGACG	59.551	55.000	6.18	0.00	0.00	4.79
264	265	1.470098	GACAATGCAGTGGATGTGGAC	59.530	52.381	19.57	0.00	0.00	4.02
265	266	1.352017	AGACAATGCAGTGGATGTGGA	59.648	47.619	19.57	0.00	0.00	4.02
266	267	1.830279	AGACAATGCAGTGGATGTGG	58.170	50.000	19.57	0.00	0.00	4.17
267	268	2.349580	CGTAGACAATGCAGTGGATGTG	59.650	50.000	19.57	1.34	0.00	3.21
268	269	2.028112	ACGTAGACAATGCAGTGGATGT	60.028	45.455	19.57	11.43	0.00	3.06
269	270	2.621338	ACGTAGACAATGCAGTGGATG	58.379	47.619	19.57	10.81	0.00	3.51
270	271	3.262420	GAACGTAGACAATGCAGTGGAT	58.738	45.455	19.57	8.80	0.00	3.41
271	272	2.611971	GGAACGTAGACAATGCAGTGGA	60.612	50.000	19.57	0.00	0.00	4.02
272	273	1.732259	GGAACGTAGACAATGCAGTGG	59.268	52.381	19.57	2.30	0.00	4.00
288	289	1.019278	ACATGGTGATGACGCGGAAC	61.019	55.000	12.47	1.68	33.36	3.62
289	290	0.739462	GACATGGTGATGACGCGGAA	60.739	55.000	12.47	0.00	33.36	4.30
290	291	1.153647	GACATGGTGATGACGCGGA	60.154	57.895	12.47	0.00	33.36	5.54
291	292	2.173669	GGACATGGTGATGACGCGG	61.174	63.158	12.47	0.00	33.36	6.46
292	293	1.447663	TGGACATGGTGATGACGCG	60.448	57.895	3.53	3.53	33.36	6.01
293	294	1.369091	GGTGGACATGGTGATGACGC	61.369	60.000	0.00	0.00	33.36	5.19
294	295	1.083806	CGGTGGACATGGTGATGACG	61.084	60.000	0.00	0.00	33.36	4.35
295	296	1.369091	GCGGTGGACATGGTGATGAC	61.369	60.000	0.00	0.00	33.36	3.06
296	297	1.078497	GCGGTGGACATGGTGATGA	60.078	57.895	0.00	0.00	33.36	2.92
297	298	2.114670	GGCGGTGGACATGGTGATG	61.115	63.158	0.00	0.00	35.49	3.07
298	299	2.135903	TTGGCGGTGGACATGGTGAT	62.136	55.000	0.00	0.00	0.00	3.06
299	300	2.135903	ATTGGCGGTGGACATGGTGA	62.136	55.000	0.00	0.00	0.00	4.02
300	301	1.678635	ATTGGCGGTGGACATGGTG	60.679	57.895	0.00	0.00	0.00	4.17
301	302	1.678635	CATTGGCGGTGGACATGGT	60.679	57.895	0.00	0.00	0.00	3.55
302	303	1.378382	TCATTGGCGGTGGACATGG	60.378	57.895	0.00	0.00	0.00	3.66
303	304	1.802636	GTCATTGGCGGTGGACATG	59.197	57.895	0.00	0.00	0.00	3.21
304	305	1.745115	CGTCATTGGCGGTGGACAT	60.745	57.895	1.94	0.00	0.00	3.06
305	306	2.358125	CGTCATTGGCGGTGGACA	60.358	61.111	1.94	0.00	0.00	4.02
306	307	2.358247	ACGTCATTGGCGGTGGAC	60.358	61.111	15.92	0.00	0.00	4.02
307	308	2.047655	GACGTCATTGGCGGTGGA	60.048	61.111	15.92	0.00	0.00	4.02
308	309	3.487202	CGACGTCATTGGCGGTGG	61.487	66.667	17.16	0.00	0.00	4.61
309	310	1.752501	GATCGACGTCATTGGCGGTG	61.753	60.000	17.16	6.83	0.00	4.94
310	311	1.518572	GATCGACGTCATTGGCGGT	60.519	57.895	17.16	0.00	0.00	5.68
311	312	0.875908	ATGATCGACGTCATTGGCGG	60.876	55.000	17.16	0.00	35.34	6.13
312	313	0.930310	AATGATCGACGTCATTGGCG	59.070	50.000	17.16	9.48	44.75	5.69
313	314	1.261619	GGAATGATCGACGTCATTGGC	59.738	52.381	21.92	12.93	46.02	4.52
314	315	1.522676	CGGAATGATCGACGTCATTGG	59.477	52.381	21.92	13.70	46.02	3.16
315	316	1.071239	GCGGAATGATCGACGTCATTG	60.071	52.381	21.92	13.74	46.02	2.82
317	318	0.597637	GGCGGAATGATCGACGTCAT	60.598	55.000	17.16	8.24	40.44	3.06
318	319	1.226859	GGCGGAATGATCGACGTCA	60.227	57.895	17.16	3.13	0.00	4.35
319	320	1.226859	TGGCGGAATGATCGACGTC	60.227	57.895	5.18	5.18	38.72	4.34
320	321	1.518572	GTGGCGGAATGATCGACGT	60.519	57.895	0.00	0.00	38.72	4.34
321	322	2.237751	GGTGGCGGAATGATCGACG	61.238	63.158	0.00	0.00	38.72	5.12
322	323	2.237751	CGGTGGCGGAATGATCGAC	61.238	63.158	0.00	0.00	35.97	4.20
323	324	2.106131	CGGTGGCGGAATGATCGA	59.894	61.111	0.00	0.00	0.00	3.59
324	325	1.951130	CTCGGTGGCGGAATGATCG	60.951	63.158	0.00	0.00	0.00	3.69
325	326	0.179084	TTCTCGGTGGCGGAATGATC	60.179	55.000	0.00	0.00	0.00	2.92
326	327	0.179073	CTTCTCGGTGGCGGAATGAT	60.179	55.000	0.00	0.00	0.00	2.45
327	328	1.218047	CTTCTCGGTGGCGGAATGA	59.782	57.895	0.00	0.00	0.00	2.57
328	329	0.391130	TTCTTCTCGGTGGCGGAATG	60.391	55.000	0.00	0.00	0.00	2.67
329	330	0.108138	CTTCTTCTCGGTGGCGGAAT	60.108	55.000	0.00	0.00	0.00	3.01
330	331	1.183030	TCTTCTTCTCGGTGGCGGAA	61.183	55.000	0.00	0.00	0.00	4.30
331	332	1.605451	TCTTCTTCTCGGTGGCGGA	60.605	57.895	0.00	0.00	0.00	5.54
332	333	1.446272	GTCTTCTTCTCGGTGGCGG	60.446	63.158	0.00	0.00	0.00	6.13
333	334	1.446272	GGTCTTCTTCTCGGTGGCG	60.446	63.158	0.00	0.00	0.00	5.69
334	335	1.446272	CGGTCTTCTTCTCGGTGGC	60.446	63.158	0.00	0.00	0.00	5.01
335	336	1.446272	GCGGTCTTCTTCTCGGTGG	60.446	63.158	0.00	0.00	0.00	4.61
336	337	1.446272	GGCGGTCTTCTTCTCGGTG	60.446	63.158	0.00	0.00	0.00	4.94
337	338	2.971452	GGCGGTCTTCTTCTCGGT	59.029	61.111	0.00	0.00	0.00	4.69
338	339	2.202623	CGGCGGTCTTCTTCTCGG	60.203	66.667	0.00	0.00	0.00	4.63
339	340	2.881352	GCGGCGGTCTTCTTCTCG	60.881	66.667	9.78	0.00	0.00	4.04
340	341	2.881352	CGCGGCGGTCTTCTTCTC	60.881	66.667	15.84	0.00	0.00	2.87
341	342	4.436998	CCGCGGCGGTCTTCTTCT	62.437	66.667	32.14	0.00	42.73	2.85
358	359	0.898320	TCAGTAGGCCAGTCAGAAGC	59.102	55.000	5.01	0.00	0.00	3.86
359	360	2.828520	TCTTCAGTAGGCCAGTCAGAAG	59.171	50.000	5.01	11.74	34.01	2.85
360	361	2.828520	CTCTTCAGTAGGCCAGTCAGAA	59.171	50.000	5.01	1.26	0.00	3.02
361	362	2.225142	ACTCTTCAGTAGGCCAGTCAGA	60.225	50.000	5.01	0.00	0.00	3.27
362	363	2.175202	ACTCTTCAGTAGGCCAGTCAG	58.825	52.381	5.01	0.00	0.00	3.51
363	364	2.310779	ACTCTTCAGTAGGCCAGTCA	57.689	50.000	5.01	0.00	0.00	3.41
364	365	5.595133	AGTTATACTCTTCAGTAGGCCAGTC	59.405	44.000	5.01	0.00	38.56	3.51
365	366	5.520751	AGTTATACTCTTCAGTAGGCCAGT	58.479	41.667	5.01	0.00	38.56	4.00
366	367	5.594725	TGAGTTATACTCTTCAGTAGGCCAG	59.405	44.000	5.01	0.00	45.27	4.85
367	368	5.516044	TGAGTTATACTCTTCAGTAGGCCA	58.484	41.667	5.01	0.00	45.27	5.36
368	369	6.658188	ATGAGTTATACTCTTCAGTAGGCC	57.342	41.667	0.00	0.00	45.27	5.19
369	370	9.465985	GTAAATGAGTTATACTCTTCAGTAGGC	57.534	37.037	8.18	0.00	45.27	3.93
370	371	9.968870	GGTAAATGAGTTATACTCTTCAGTAGG	57.031	37.037	8.18	0.00	45.27	3.18
371	372	9.968870	GGGTAAATGAGTTATACTCTTCAGTAG	57.031	37.037	8.18	0.00	45.27	2.57
372	373	8.921205	GGGGTAAATGAGTTATACTCTTCAGTA	58.079	37.037	8.18	0.00	45.27	2.74
373	374	7.417570	CGGGGTAAATGAGTTATACTCTTCAGT	60.418	40.741	8.18	0.00	45.27	3.41
374	375	6.924060	CGGGGTAAATGAGTTATACTCTTCAG	59.076	42.308	8.18	0.00	45.27	3.02
375	376	6.684613	GCGGGGTAAATGAGTTATACTCTTCA	60.685	42.308	8.18	0.00	45.27	3.02
376	377	5.695363	GCGGGGTAAATGAGTTATACTCTTC	59.305	44.000	8.18	0.00	45.27	2.87
377	378	5.365895	AGCGGGGTAAATGAGTTATACTCTT	59.634	40.000	8.18	0.00	45.27	2.85
378	379	4.900054	AGCGGGGTAAATGAGTTATACTCT	59.100	41.667	8.18	0.00	45.27	3.24
379	380	5.211174	AGCGGGGTAAATGAGTTATACTC	57.789	43.478	0.00	0.00	45.26	2.59
380	381	5.365895	AGAAGCGGGGTAAATGAGTTATACT	59.634	40.000	0.00	0.00	0.00	2.12
381	382	5.465724	CAGAAGCGGGGTAAATGAGTTATAC	59.534	44.000	0.00	0.00	0.00	1.47
382	383	5.129815	ACAGAAGCGGGGTAAATGAGTTATA	59.870	40.000	0.00	0.00	0.00	0.98
383	384	4.080526	ACAGAAGCGGGGTAAATGAGTTAT	60.081	41.667	0.00	0.00	0.00	1.89
384	385	3.262405	ACAGAAGCGGGGTAAATGAGTTA	59.738	43.478	0.00	0.00	0.00	2.24
385	386	2.039879	ACAGAAGCGGGGTAAATGAGTT	59.960	45.455	0.00	0.00	0.00	3.01
386	387	1.628846	ACAGAAGCGGGGTAAATGAGT	59.371	47.619	0.00	0.00	0.00	3.41
387	388	2.403252	ACAGAAGCGGGGTAAATGAG	57.597	50.000	0.00	0.00	0.00	2.90
388	389	2.871096	AACAGAAGCGGGGTAAATGA	57.129	45.000	0.00	0.00	0.00	2.57
389	390	3.081804	AGAAACAGAAGCGGGGTAAATG	58.918	45.455	0.00	0.00	0.00	2.32
390	391	3.434940	AGAAACAGAAGCGGGGTAAAT	57.565	42.857	0.00	0.00	0.00	1.40
391	392	2.943036	AGAAACAGAAGCGGGGTAAA	57.057	45.000	0.00	0.00	0.00	2.01
392	393	2.943036	AAGAAACAGAAGCGGGGTAA	57.057	45.000	0.00	0.00	0.00	2.85
393	394	2.370849	AGAAAGAAACAGAAGCGGGGTA	59.629	45.455	0.00	0.00	0.00	3.69
394	395	1.143073	AGAAAGAAACAGAAGCGGGGT	59.857	47.619	0.00	0.00	0.00	4.95
395	396	1.537202	CAGAAAGAAACAGAAGCGGGG	59.463	52.381	0.00	0.00	0.00	5.73
396	397	2.222027	ACAGAAAGAAACAGAAGCGGG	58.778	47.619	0.00	0.00	0.00	6.13
397	398	3.134458	AGACAGAAAGAAACAGAAGCGG	58.866	45.455	0.00	0.00	0.00	5.52
398	399	4.271049	TCAAGACAGAAAGAAACAGAAGCG	59.729	41.667	0.00	0.00	0.00	4.68
399	400	5.065218	TGTCAAGACAGAAAGAAACAGAAGC	59.935	40.000	0.00	0.00	36.21	3.86
400	401	6.668541	TGTCAAGACAGAAAGAAACAGAAG	57.331	37.500	0.00	0.00	36.21	2.85
414	415	3.621268	GCACAACTTGTACTGTCAAGACA	59.379	43.478	19.63	2.56	45.11	3.41
415	416	3.621268	TGCACAACTTGTACTGTCAAGAC	59.379	43.478	19.63	0.00	45.11	3.01
416	417	3.621268	GTGCACAACTTGTACTGTCAAGA	59.379	43.478	13.17	2.01	45.11	3.02
417	418	3.544048	CGTGCACAACTTGTACTGTCAAG	60.544	47.826	18.64	14.33	46.89	3.02
418	419	2.350192	CGTGCACAACTTGTACTGTCAA	59.650	45.455	18.64	0.00	38.62	3.18
419	420	1.930503	CGTGCACAACTTGTACTGTCA	59.069	47.619	18.64	0.00	38.62	3.58
420	421	1.931172	ACGTGCACAACTTGTACTGTC	59.069	47.619	18.64	0.00	38.62	3.51
421	422	2.018542	ACGTGCACAACTTGTACTGT	57.981	45.000	18.64	0.00	38.62	3.55
422	423	3.377439	TCTACGTGCACAACTTGTACTG	58.623	45.455	18.64	0.00	38.62	2.74
423	424	3.720949	TCTACGTGCACAACTTGTACT	57.279	42.857	18.64	0.00	38.62	2.73
424	425	6.642683	AATATCTACGTGCACAACTTGTAC	57.357	37.500	18.64	0.00	37.46	2.90
425	426	7.094631	AGAAATATCTACGTGCACAACTTGTA	58.905	34.615	18.64	9.34	32.88	2.41
426	427	5.932303	AGAAATATCTACGTGCACAACTTGT	59.068	36.000	18.64	8.61	32.88	3.16
427	428	6.408858	AGAAATATCTACGTGCACAACTTG	57.591	37.500	18.64	2.02	32.88	3.16
428	429	8.718102	AATAGAAATATCTACGTGCACAACTT	57.282	30.769	18.64	0.00	40.88	2.66
429	430	9.982651	ATAATAGAAATATCTACGTGCACAACT	57.017	29.630	18.64	0.41	40.88	3.16
530	531	9.739786	GCAATTTTTCGGTTAATTTAATCTGTG	57.260	29.630	0.00	0.00	0.00	3.66
531	532	9.705290	AGCAATTTTTCGGTTAATTTAATCTGT	57.295	25.926	0.00	0.00	0.00	3.41
542	543	9.531942	TCGAGTATATTAGCAATTTTTCGGTTA	57.468	29.630	0.00	0.00	0.00	2.85
543	544	8.333186	GTCGAGTATATTAGCAATTTTTCGGTT	58.667	33.333	0.00	0.00	0.00	4.44
544	545	7.493320	TGTCGAGTATATTAGCAATTTTTCGGT	59.507	33.333	0.00	0.00	0.00	4.69
545	546	7.847487	TGTCGAGTATATTAGCAATTTTTCGG	58.153	34.615	0.00	0.00	0.00	4.30
546	547	9.358123	CTTGTCGAGTATATTAGCAATTTTTCG	57.642	33.333	0.00	0.00	0.00	3.46
550	551	9.547753	ACATCTTGTCGAGTATATTAGCAATTT	57.452	29.630	0.00	0.00	0.00	1.82
552	553	9.847706	CTACATCTTGTCGAGTATATTAGCAAT	57.152	33.333	0.00	0.00	0.00	3.56
553	554	7.808381	GCTACATCTTGTCGAGTATATTAGCAA	59.192	37.037	0.00	0.00	0.00	3.91
554	555	7.040686	TGCTACATCTTGTCGAGTATATTAGCA	60.041	37.037	7.86	7.86	0.00	3.49
555	556	7.306213	TGCTACATCTTGTCGAGTATATTAGC	58.694	38.462	0.00	0.00	0.00	3.09
556	557	9.847706	AATGCTACATCTTGTCGAGTATATTAG	57.152	33.333	0.00	0.00	0.00	1.73
557	558	9.626045	CAATGCTACATCTTGTCGAGTATATTA	57.374	33.333	0.00	0.00	0.00	0.98
558	559	8.144478	ACAATGCTACATCTTGTCGAGTATATT	58.856	33.333	0.00	0.00	0.00	1.28
559	560	7.661968	ACAATGCTACATCTTGTCGAGTATAT	58.338	34.615	0.00	0.00	0.00	0.86
560	561	7.039313	ACAATGCTACATCTTGTCGAGTATA	57.961	36.000	0.00	0.00	0.00	1.47
561	562	5.907207	ACAATGCTACATCTTGTCGAGTAT	58.093	37.500	0.00	0.00	0.00	2.12
562	563	5.324784	ACAATGCTACATCTTGTCGAGTA	57.675	39.130	0.00	0.00	0.00	2.59
563	564	4.193826	ACAATGCTACATCTTGTCGAGT	57.806	40.909	0.00	0.00	0.00	4.18
564	565	6.647212	TTAACAATGCTACATCTTGTCGAG	57.353	37.500	0.00	0.00	32.18	4.04
565	566	7.428282	TTTTAACAATGCTACATCTTGTCGA	57.572	32.000	0.00	0.00	32.18	4.20
566	567	7.060633	GGTTTTTAACAATGCTACATCTTGTCG	59.939	37.037	0.00	0.00	32.18	4.35
567	568	7.865385	TGGTTTTTAACAATGCTACATCTTGTC	59.135	33.333	0.00	0.00	32.18	3.18
568	569	7.721402	TGGTTTTTAACAATGCTACATCTTGT	58.279	30.769	0.00	0.00	34.71	3.16
569	570	8.761575	ATGGTTTTTAACAATGCTACATCTTG	57.238	30.769	0.00	0.00	0.00	3.02
570	571	8.806146	AGATGGTTTTTAACAATGCTACATCTT	58.194	29.630	0.00	0.00	38.41	2.40
571	572	8.246180	CAGATGGTTTTTAACAATGCTACATCT	58.754	33.333	0.00	0.00	41.18	2.90
572	573	7.489113	CCAGATGGTTTTTAACAATGCTACATC	59.511	37.037	0.00	0.00	33.19	3.06
573	574	7.178274	TCCAGATGGTTTTTAACAATGCTACAT	59.822	33.333	0.00	0.00	36.34	2.29
574	575	6.491745	TCCAGATGGTTTTTAACAATGCTACA	59.508	34.615	0.00	0.00	36.34	2.74
575	576	6.919721	TCCAGATGGTTTTTAACAATGCTAC	58.080	36.000	0.00	0.00	36.34	3.58
576	577	7.546358	CATCCAGATGGTTTTTAACAATGCTA	58.454	34.615	0.00	0.00	35.24	3.49
577	578	6.400568	CATCCAGATGGTTTTTAACAATGCT	58.599	36.000	0.00	0.00	35.24	3.79
578	579	5.063817	GCATCCAGATGGTTTTTAACAATGC	59.936	40.000	9.58	0.19	39.16	3.56
579	580	6.164876	TGCATCCAGATGGTTTTTAACAATG	58.835	36.000	9.58	0.00	39.16	2.82
580	581	6.357579	TGCATCCAGATGGTTTTTAACAAT	57.642	33.333	9.58	0.00	39.16	2.71
581	582	5.798125	TGCATCCAGATGGTTTTTAACAA	57.202	34.783	9.58	0.00	39.16	2.83
582	583	5.798125	TTGCATCCAGATGGTTTTTAACA	57.202	34.783	9.58	0.00	39.16	2.41
583	584	6.892310	GATTGCATCCAGATGGTTTTTAAC	57.108	37.500	9.58	0.00	39.16	2.01
624	625	8.806429	TCAGAATTGCTAAATTACATCCAGAA	57.194	30.769	0.00	0.00	36.10	3.02
628	629	9.294030	CTGTTTCAGAATTGCTAAATTACATCC	57.706	33.333	0.00	0.00	36.10	3.51
662	663	4.395542	CGAACCGGTTATTGGAAAATACCA	59.604	41.667	22.33	0.00	34.20	3.25
688	689	3.891400	CACCCGGCATTGCGGATG	61.891	66.667	16.88	8.41	38.85	3.51
689	690	3.636929	TTCACCCGGCATTGCGGAT	62.637	57.895	16.88	0.00	0.00	4.18
690	691	3.851897	TTTCACCCGGCATTGCGGA	62.852	57.895	16.88	0.34	0.00	5.54
691	692	2.427540	TTTTTCACCCGGCATTGCGG	62.428	55.000	9.09	9.09	0.00	5.69
692	693	1.006805	TTTTTCACCCGGCATTGCG	60.007	52.632	0.00	0.00	0.00	4.85
717	718	3.835978	TCCACGAGGATTTTTCTCTGGTA	59.164	43.478	0.00	0.00	39.61	3.25
747	748	3.185330	CACGTGAATCCAGAGATCACAG	58.815	50.000	10.90	9.84	33.62	3.66
757	758	3.422303	GCGCTGCACGTGAATCCA	61.422	61.111	22.23	6.57	46.11	3.41
759	760	3.372676	CTGGCGCTGCACGTGAATC	62.373	63.158	22.23	2.74	46.11	2.52
773	774	1.838112	TGGGTGTGATCAATTCTGGC	58.162	50.000	0.00	0.00	0.00	4.85
777	778	5.006386	AGTTCTCTTGGGTGTGATCAATTC	58.994	41.667	0.00	0.00	0.00	2.17
778	779	4.990526	AGTTCTCTTGGGTGTGATCAATT	58.009	39.130	0.00	0.00	0.00	2.32
780	781	5.560722	TTAGTTCTCTTGGGTGTGATCAA	57.439	39.130	0.00	0.00	0.00	2.57
781	782	5.762179	ATTAGTTCTCTTGGGTGTGATCA	57.238	39.130	0.00	0.00	0.00	2.92
782	783	6.879400	ACTATTAGTTCTCTTGGGTGTGATC	58.121	40.000	0.00	0.00	0.00	2.92
786	787	5.958987	AGCTACTATTAGTTCTCTTGGGTGT	59.041	40.000	0.85	0.00	0.00	4.16
792	793	9.030452	CCCATCATAGCTACTATTAGTTCTCTT	57.970	37.037	0.85	0.00	0.00	2.85
794	795	7.093727	TGCCCATCATAGCTACTATTAGTTCTC	60.094	40.741	0.85	0.00	0.00	2.87
800	801	8.609617	AATACTGCCCATCATAGCTACTATTA	57.390	34.615	0.00	0.00	0.00	0.98
801	802	7.180946	TGAATACTGCCCATCATAGCTACTATT	59.819	37.037	0.00	0.00	0.00	1.73
802	803	6.669591	TGAATACTGCCCATCATAGCTACTAT	59.330	38.462	0.00	0.00	0.00	2.12
803	804	6.016555	TGAATACTGCCCATCATAGCTACTA	58.983	40.000	0.00	0.00	0.00	1.82
804	805	4.840680	TGAATACTGCCCATCATAGCTACT	59.159	41.667	0.00	0.00	0.00	2.57
805	806	5.152623	TGAATACTGCCCATCATAGCTAC	57.847	43.478	0.00	0.00	0.00	3.58
823	824	3.369157	GCCTAGTACCGTTCCAACTGAAT	60.369	47.826	0.00	0.00	34.90	2.57
828	829	2.757314	AGTAGCCTAGTACCGTTCCAAC	59.243	50.000	0.00	0.00	0.00	3.77
838	839	7.961457	GGTGTACCATAGCTAAGTAGCCTAGTA	60.961	44.444	6.71	2.25	42.22	1.82
839	840	7.196019	GGTGTACCATAGCTAAGTAGCCTAGT	61.196	46.154	6.71	3.10	42.22	2.57
840	841	5.183522	GGTGTACCATAGCTAAGTAGCCTAG	59.816	48.000	6.71	0.00	42.22	3.02
841	842	5.075493	GGTGTACCATAGCTAAGTAGCCTA	58.925	45.833	6.71	0.36	42.22	3.93
842	843	3.896272	GGTGTACCATAGCTAAGTAGCCT	59.104	47.826	6.71	0.00	42.22	4.58
843	844	3.305199	CGGTGTACCATAGCTAAGTAGCC	60.305	52.174	6.71	7.46	42.55	3.93
844	845	3.317430	ACGGTGTACCATAGCTAAGTAGC	59.683	47.826	0.00	1.90	42.16	3.58
845	846	5.049129	GGTACGGTGTACCATAGCTAAGTAG	60.049	48.000	18.75	0.00	37.53	2.57
846	847	4.821805	GGTACGGTGTACCATAGCTAAGTA	59.178	45.833	18.75	0.00	37.53	2.24
847	848	3.633986	GGTACGGTGTACCATAGCTAAGT	59.366	47.826	18.75	0.83	37.53	2.24
848	849	4.234530	GGTACGGTGTACCATAGCTAAG	57.765	50.000	18.75	0.00	37.53	2.18
878	879	3.712881	GCGGAACACTGTCCACGC	61.713	66.667	8.65	8.65	37.56	5.34
886	887	4.003788	CTGGACGGGCGGAACACT	62.004	66.667	0.00	0.00	0.00	3.55
888	889	3.998672	GACTGGACGGGCGGAACA	61.999	66.667	0.00	0.00	0.00	3.18
889	890	4.754667	GGACTGGACGGGCGGAAC	62.755	72.222	0.00	0.00	0.00	3.62
891	892	3.588817	TAAGGACTGGACGGGCGGA	62.589	63.158	0.00	0.00	0.00	5.54
892	893	2.175035	TTTAAGGACTGGACGGGCGG	62.175	60.000	0.00	0.00	0.00	6.13
893	894	0.107848	ATTTAAGGACTGGACGGGCG	60.108	55.000	0.00	0.00	0.00	6.13
894	895	1.379527	CATTTAAGGACTGGACGGGC	58.620	55.000	0.00	0.00	0.00	6.13
895	896	1.557832	TCCATTTAAGGACTGGACGGG	59.442	52.381	0.00	0.00	34.17	5.28
907	911	2.496871	CCAAGTGCCAGCATCCATTTAA	59.503	45.455	0.00	0.00	0.00	1.52
918	922	3.060615	GCCTCTGCCAAGTGCCAG	61.061	66.667	0.00	0.00	40.16	4.85
1072	1103	0.861837	AAACAAGACGAAGCAGAGCG	59.138	50.000	0.00	0.00	0.00	5.03
1091	1122	1.000506	GACCTGACGTGGAAGCAGTAA	59.999	52.381	0.00	0.00	0.00	2.24
1341	1409	4.351054	CTGGGCAAACTCGGGGCT	62.351	66.667	0.00	0.00	0.00	5.19
1598	1692	2.981909	TCGACGCCGAAGACCAGT	60.982	61.111	0.00	0.00	42.51	4.00
1640	1734	4.467084	GCGAATGGCACCTCCGGA	62.467	66.667	2.93	2.93	42.87	5.14
1856	1953	4.200283	GAGGAGAGCAGGTCCGCG	62.200	72.222	0.00	0.00	39.30	6.46
1880	1978	3.029735	TCGTCGTCGTCGTCGTCA	61.030	61.111	18.44	1.12	45.27	4.35
2272	2394	3.716195	CCCACACGGCCTCCATCA	61.716	66.667	0.00	0.00	0.00	3.07
2504	2626	3.452264	TCTTCATGTGGAGAACGATGGAT	59.548	43.478	0.00	0.00	0.00	3.41
2537	2659	0.545646	GCCTCTTCTTGATCCTGGCT	59.454	55.000	0.00	0.00	36.32	4.75
2551	2673	2.435069	CAGATCTTCATCACCTGCCTCT	59.565	50.000	0.00	0.00	0.00	3.69
2567	2689	6.704050	GCCTAACTTTAACTCTGGATCAGATC	59.296	42.308	1.18	1.18	39.92	2.75
2569	2691	5.721960	AGCCTAACTTTAACTCTGGATCAGA	59.278	40.000	0.00	0.00	38.25	3.27
2718	2842	6.127281	ACCAAACGAAAAGGACTAAACCAAAT	60.127	34.615	0.00	0.00	0.00	2.32
2757	2881	2.247358	CAAGTACCTGGCCCAAATTGT	58.753	47.619	0.00	0.00	0.00	2.71
2759	2883	2.694616	ACAAGTACCTGGCCCAAATT	57.305	45.000	0.00	0.00	0.00	1.82
2790	2914	7.042456	GCGATCTCTATGAAAGCACATAAAAGA	60.042	37.037	0.00	0.00	33.26	2.52
2798	2922	2.732366	TCGCGATCTCTATGAAAGCAC	58.268	47.619	3.71	0.00	33.00	4.40
2799	2923	3.436700	TTCGCGATCTCTATGAAAGCA	57.563	42.857	10.88	0.00	33.00	3.91
2814	2938	5.830900	TTTTGACCCAATTATTTTTCGCG	57.169	34.783	0.00	0.00	0.00	5.87
2829	2953	7.117667	GTCCCACAATGTTGATTTATTTTGACC	59.882	37.037	0.00	0.00	0.00	4.02
2858	2982	9.555727	GGTTAGTAAATATGAAAGGTGCATAGA	57.444	33.333	0.00	0.00	32.28	1.98
2864	2988	8.575649	AGTTGGGTTAGTAAATATGAAAGGTG	57.424	34.615	0.00	0.00	0.00	4.00
2866	2990	7.466860	GCGAGTTGGGTTAGTAAATATGAAAGG	60.467	40.741	0.00	0.00	0.00	3.11
2914	3039	6.992063	AATTAGCTCGCCCTAAATATGATG	57.008	37.500	0.00	0.00	31.62	3.07
3008	3133	6.428295	TCACCGATTTACCCATAATCCTTTT	58.572	36.000	0.00	0.00	0.00	2.27
3157	3284	9.362151	ACTTTTTACCTCAAATCCTTCATGTAA	57.638	29.630	0.00	0.00	0.00	2.41
3190	3317	5.420104	AGCACATTGGATCCTTCCTTTTAAG	59.580	40.000	14.23	0.00	43.07	1.85
3197	3324	1.396653	CCAGCACATTGGATCCTTCC	58.603	55.000	14.23	0.00	40.87	3.46
3213	3349	6.659824	TCCTTTTCTAATTTAGTAGCCCCAG	58.340	40.000	3.45	0.00	0.00	4.45
3240	3376	4.632688	TCCGTTTTAGTCGGGAATCAAATC	59.367	41.667	4.58	0.00	46.82	2.17
3269	3405	6.371809	TCCTTTCATTAATTACCATGACGC	57.628	37.500	0.00	0.00	0.00	5.19
3343	3479	2.358322	TTCTTTGCCGGGGATAATCC	57.642	50.000	2.18	0.00	35.23	3.01
3366	3502	5.149973	TGTTGCAATTTAGCCATGTTCAT	57.850	34.783	0.59	0.00	0.00	2.57
3403	3539	7.096271	TGCAACGTAGCATTCTTTTACAAAATG	60.096	33.333	0.00	0.00	40.11	2.32
3414	3550	3.231734	TGCTGCAACGTAGCATTCT	57.768	47.368	7.40	0.00	45.52	2.40
3424	3560	9.226345	GATTAACTATAAAGAACATGCTGCAAC	57.774	33.333	6.36	0.00	0.00	4.17
3437	3573	6.645415	CCTACAGCACCGGATTAACTATAAAG	59.355	42.308	9.46	0.00	0.00	1.85
3441	3577	4.038883	GTCCTACAGCACCGGATTAACTAT	59.961	45.833	9.46	0.00	0.00	2.12
3442	3578	3.382546	GTCCTACAGCACCGGATTAACTA	59.617	47.826	9.46	0.00	0.00	2.24
3443	3579	2.167900	GTCCTACAGCACCGGATTAACT	59.832	50.000	9.46	0.00	0.00	2.24
3444	3580	2.093869	TGTCCTACAGCACCGGATTAAC	60.094	50.000	9.46	0.00	0.00	2.01
3445	3581	2.181125	TGTCCTACAGCACCGGATTAA	58.819	47.619	9.46	0.00	0.00	1.40
3446	3582	1.855295	TGTCCTACAGCACCGGATTA	58.145	50.000	9.46	0.00	0.00	1.75
3447	3583	1.204146	ATGTCCTACAGCACCGGATT	58.796	50.000	9.46	0.00	0.00	3.01
3448	3584	1.204146	AATGTCCTACAGCACCGGAT	58.796	50.000	9.46	0.00	0.00	4.18
3449	3585	1.855295	TAATGTCCTACAGCACCGGA	58.145	50.000	9.46	0.00	0.00	5.14
3499	3635	0.804364	CACATATGCCTGTGCGTTGT	59.196	50.000	1.58	0.00	40.03	3.32
3524	3660	9.525826	CTATGAAAGCCTCCATCCTTTATTATT	57.474	33.333	0.00	0.00	31.85	1.40
3525	3661	8.673251	ACTATGAAAGCCTCCATCCTTTATTAT	58.327	33.333	0.00	0.00	31.85	1.28
3526	3662	8.045720	ACTATGAAAGCCTCCATCCTTTATTA	57.954	34.615	0.00	0.00	31.85	0.98
3527	3663	6.915786	ACTATGAAAGCCTCCATCCTTTATT	58.084	36.000	0.00	0.00	31.85	1.40
3528	3664	6.521527	ACTATGAAAGCCTCCATCCTTTAT	57.478	37.500	0.00	0.00	31.85	1.40
3529	3665	5.975988	ACTATGAAAGCCTCCATCCTTTA	57.024	39.130	0.00	0.00	31.85	1.85
3530	3666	4.870021	ACTATGAAAGCCTCCATCCTTT	57.130	40.909	0.00	0.00	34.22	3.11
3531	3667	4.476479	AGAACTATGAAAGCCTCCATCCTT	59.524	41.667	0.00	0.00	0.00	3.36
3532	3668	4.043596	AGAACTATGAAAGCCTCCATCCT	58.956	43.478	0.00	0.00	0.00	3.24
3533	3669	4.429854	AGAACTATGAAAGCCTCCATCC	57.570	45.455	0.00	0.00	0.00	3.51
3534	3670	5.431765	TGAAGAACTATGAAAGCCTCCATC	58.568	41.667	0.00	0.00	0.00	3.51
3535	3671	5.441718	TGAAGAACTATGAAAGCCTCCAT	57.558	39.130	0.00	0.00	0.00	3.41
3536	3672	4.908601	TGAAGAACTATGAAAGCCTCCA	57.091	40.909	0.00	0.00	0.00	3.86
3537	3673	4.819088	GGATGAAGAACTATGAAAGCCTCC	59.181	45.833	0.00	0.00	0.00	4.30
3538	3674	4.509600	CGGATGAAGAACTATGAAAGCCTC	59.490	45.833	0.00	0.00	0.00	4.70
3539	3675	4.080863	ACGGATGAAGAACTATGAAAGCCT	60.081	41.667	0.00	0.00	0.00	4.58
3540	3676	4.192317	ACGGATGAAGAACTATGAAAGCC	58.808	43.478	0.00	0.00	0.00	4.35
3541	3677	4.026475	CGACGGATGAAGAACTATGAAAGC	60.026	45.833	0.00	0.00	0.00	3.51
3542	3678	5.103000	ACGACGGATGAAGAACTATGAAAG	58.897	41.667	0.00	0.00	0.00	2.62
3543	3679	5.068234	ACGACGGATGAAGAACTATGAAA	57.932	39.130	0.00	0.00	0.00	2.69
3544	3680	4.669318	GACGACGGATGAAGAACTATGAA	58.331	43.478	0.00	0.00	0.00	2.57
3545	3681	3.242641	CGACGACGGATGAAGAACTATGA	60.243	47.826	0.00	0.00	35.72	2.15
3546	3682	3.036633	CGACGACGGATGAAGAACTATG	58.963	50.000	0.00	0.00	35.72	2.23
3547	3683	2.681848	ACGACGACGGATGAAGAACTAT	59.318	45.455	12.58	0.00	44.46	2.12
3548	3684	2.079158	ACGACGACGGATGAAGAACTA	58.921	47.619	12.58	0.00	44.46	2.24
3549	3685	0.879765	ACGACGACGGATGAAGAACT	59.120	50.000	12.58	0.00	44.46	3.01
3550	3686	1.694639	AACGACGACGGATGAAGAAC	58.305	50.000	12.58	0.00	44.46	3.01
3551	3687	2.427232	AAACGACGACGGATGAAGAA	57.573	45.000	12.58	0.00	44.46	2.52
3552	3688	2.427232	AAAACGACGACGGATGAAGA	57.573	45.000	12.58	0.00	44.46	2.87
3553	3689	6.506464	AATATAAAACGACGACGGATGAAG	57.494	37.500	12.58	0.00	44.46	3.02
3554	3690	5.171874	CGAATATAAAACGACGACGGATGAA	59.828	40.000	12.58	0.00	44.46	2.57
3555	3691	4.671964	CGAATATAAAACGACGACGGATGA	59.328	41.667	12.58	0.00	44.46	2.92
3556	3692	4.438797	ACGAATATAAAACGACGACGGATG	59.561	41.667	12.58	0.00	44.46	3.51
3557	3693	4.601019	ACGAATATAAAACGACGACGGAT	58.399	39.130	12.58	2.31	44.46	4.18
3558	3694	4.014847	ACGAATATAAAACGACGACGGA	57.985	40.909	12.58	0.00	44.46	4.69
3559	3695	3.785521	TGACGAATATAAAACGACGACGG	59.214	43.478	12.58	0.00	44.46	4.79
3560	3696	4.979200	TGACGAATATAAAACGACGACG	57.021	40.909	5.58	5.58	45.75	5.12
3561	3697	8.502058	CAAAATTGACGAATATAAAACGACGAC	58.498	33.333	0.00	0.00	0.00	4.34
3562	3698	8.222433	ACAAAATTGACGAATATAAAACGACGA	58.778	29.630	0.00	0.00	0.00	4.20
3563	3699	8.294473	CACAAAATTGACGAATATAAAACGACG	58.706	33.333	0.00	0.00	0.00	5.12
3564	3700	9.109533	ACACAAAATTGACGAATATAAAACGAC	57.890	29.630	0.00	0.00	0.00	4.34
3565	3701	9.666626	AACACAAAATTGACGAATATAAAACGA	57.333	25.926	0.00	0.00	0.00	3.85

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.