Multiple sequence alignment - TraesCS3A01G479100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G479100 chr3A 100.000 5904 0 0 1 5904 710934608 710940511 0.000000e+00 10903.0
1 TraesCS3A01G479100 chr3A 91.800 2634 144 28 2627 5207 711057650 711060264 0.000000e+00 3602.0
2 TraesCS3A01G479100 chr3A 84.078 1231 171 18 696 1913 710836715 710837933 0.000000e+00 1164.0
3 TraesCS3A01G479100 chr3A 88.841 932 98 4 984 1912 711056708 711057636 0.000000e+00 1140.0
4 TraesCS3A01G479100 chr3A 84.526 517 35 16 5384 5900 711060498 711060969 2.490000e-128 470.0
5 TraesCS3A01G479100 chr3A 82.988 482 29 18 5429 5904 710886437 710886871 2.580000e-103 387.0
6 TraesCS3A01G479100 chr3A 89.604 202 17 2 133 330 710846766 710846967 2.730000e-63 254.0
7 TraesCS3A01G479100 chr3A 89.143 175 14 2 412 585 710847038 710847208 4.630000e-51 213.0
8 TraesCS3A01G479100 chr3A 89.937 159 14 2 332 488 711066448 711066606 2.790000e-48 204.0
9 TraesCS3A01G479100 chr3A 88.462 156 12 4 5200 5355 711060352 711060501 3.630000e-42 183.0
10 TraesCS3A01G479100 chr3A 80.203 197 26 9 139 330 711066209 711066397 1.030000e-27 135.0
11 TraesCS3A01G479100 chr3B 89.459 2495 238 20 2426 4912 765623096 765625573 0.000000e+00 3127.0
12 TraesCS3A01G479100 chr3B 89.023 2478 251 15 2423 4892 765669805 765672269 0.000000e+00 3049.0
13 TraesCS3A01G479100 chr3B 87.174 2339 234 37 2897 5184 765928465 765930788 0.000000e+00 2597.0
14 TraesCS3A01G479100 chr3B 84.062 2127 311 21 2809 4923 765549081 765551191 0.000000e+00 2025.0
15 TraesCS3A01G479100 chr3B 85.961 1332 153 20 816 2127 765621775 765623092 0.000000e+00 1393.0
16 TraesCS3A01G479100 chr3B 85.550 1308 162 17 678 1971 765667888 765669182 0.000000e+00 1343.0
17 TraesCS3A01G479100 chr3B 84.502 1226 170 15 696 1913 765547620 765548833 0.000000e+00 1194.0
18 TraesCS3A01G479100 chr3B 84.253 1251 144 25 893 2127 765656641 765657854 0.000000e+00 1170.0
19 TraesCS3A01G479100 chr3B 90.132 456 38 4 5273 5728 765936225 765936673 2.370000e-163 586.0
20 TraesCS3A01G479100 chr3B 82.560 711 78 29 5198 5902 765660701 765661371 8.530000e-163 584.0
21 TraesCS3A01G479100 chr3B 91.124 169 14 1 5736 5904 765716740 765716907 1.660000e-55 228.0
22 TraesCS3A01G479100 chr3B 80.399 301 49 9 2128 2425 770396066 770395773 2.770000e-53 220.0
23 TraesCS3A01G479100 chr3B 95.349 129 6 0 5728 5856 765979878 765980006 7.760000e-49 206.0
24 TraesCS3A01G479100 chr3B 87.574 169 10 4 48 205 765559592 765559760 1.010000e-42 185.0
25 TraesCS3A01G479100 chr3B 76.796 362 50 17 139 488 765666521 765666860 7.870000e-39 172.0
26 TraesCS3A01G479100 chr3B 86.364 154 19 2 336 488 765988250 765988402 3.660000e-37 167.0
27 TraesCS3A01G479100 chr3B 77.206 272 47 11 228 488 765620815 765621082 1.710000e-30 145.0
28 TraesCS3A01G479100 chr3B 87.931 116 10 4 375 488 765655253 765655366 3.710000e-27 134.0
29 TraesCS3A01G479100 chr3B 91.954 87 7 0 5818 5904 765559923 765560009 8.030000e-24 122.0
30 TraesCS3A01G479100 chr3B 92.188 64 4 1 553 615 765667735 765667798 8.150000e-14 89.8
31 TraesCS3A01G479100 chr3D 90.578 2006 171 14 2897 4891 575546577 575548575 0.000000e+00 2641.0
32 TraesCS3A01G479100 chr3D 90.890 1877 156 12 2871 4736 575527340 575529212 0.000000e+00 2505.0
33 TraesCS3A01G479100 chr3D 88.894 2044 206 16 2871 4902 574770175 574768141 0.000000e+00 2497.0
34 TraesCS3A01G479100 chr3D 88.894 2044 206 16 2871 4902 575488002 575490036 0.000000e+00 2497.0
35 TraesCS3A01G479100 chr3D 86.435 1961 200 26 10 1913 574772269 574770318 0.000000e+00 2087.0
36 TraesCS3A01G479100 chr3D 86.435 1961 200 26 10 1913 575485908 575487859 0.000000e+00 2087.0
37 TraesCS3A01G479100 chr3D 84.720 1178 159 15 744 1913 574783104 574781940 0.000000e+00 1158.0
38 TraesCS3A01G479100 chr3D 90.056 714 50 9 5200 5903 575529896 575530598 0.000000e+00 905.0
39 TraesCS3A01G479100 chr3D 80.541 370 37 14 139 488 575559186 575559540 9.820000e-63 252.0
40 TraesCS3A01G479100 chr3D 91.667 48 4 0 1586 1633 565185466 565185419 3.820000e-07 67.6
41 TraesCS3A01G479100 chr5A 90.354 311 20 4 2125 2425 18052988 18052678 3.310000e-107 399.0
42 TraesCS3A01G479100 chr4B 90.554 307 20 3 2128 2425 484781737 484782043 1.190000e-106 398.0
43 TraesCS3A01G479100 chr5B 88.197 305 30 6 2122 2425 29353124 29353423 5.630000e-95 359.0
44 TraesCS3A01G479100 chr4D 86.901 313 31 8 2128 2435 382308636 382308329 5.670000e-90 342.0
45 TraesCS3A01G479100 chr7D 85.333 300 37 6 2127 2425 206482244 206481951 2.670000e-78 303.0
46 TraesCS3A01G479100 chr1B 83.612 299 40 8 2128 2423 221634193 221634485 7.540000e-69 272.0
47 TraesCS3A01G479100 chr1B 82.895 304 42 10 2127 2425 8915037 8915335 1.260000e-66 265.0
48 TraesCS3A01G479100 chr7B 80.511 313 45 13 2123 2428 668934643 668934340 5.950000e-55 226.0
49 TraesCS3A01G479100 chr6B 80.377 265 43 7 2128 2389 80734516 80734774 6.040000e-45 193.0
50 TraesCS3A01G479100 chr6B 80.377 265 43 7 2128 2389 80737994 80738252 6.040000e-45 193.0
51 TraesCS3A01G479100 chr5D 89.552 67 5 2 2438 2503 321376938 321377003 3.790000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G479100 chr3A 710934608 710940511 5903 False 10903.000000 10903 100.000000 1 5904 1 chr3A.!!$F3 5903
1 TraesCS3A01G479100 chr3A 711056708 711060969 4261 False 1348.750000 3602 88.407250 984 5900 4 chr3A.!!$F5 4916
2 TraesCS3A01G479100 chr3A 710836715 710837933 1218 False 1164.000000 1164 84.078000 696 1913 1 chr3A.!!$F1 1217
3 TraesCS3A01G479100 chr3B 765928465 765930788 2323 False 2597.000000 2597 87.174000 2897 5184 1 chr3B.!!$F2 2287
4 TraesCS3A01G479100 chr3B 765547620 765551191 3571 False 1609.500000 2025 84.282000 696 4923 2 chr3B.!!$F6 4227
5 TraesCS3A01G479100 chr3B 765620815 765625573 4758 False 1555.000000 3127 84.208667 228 4912 3 chr3B.!!$F8 4684
6 TraesCS3A01G479100 chr3B 765666521 765672269 5748 False 1163.450000 3049 85.889250 139 4892 4 chr3B.!!$F10 4753
7 TraesCS3A01G479100 chr3B 765655253 765661371 6118 False 629.333333 1170 84.914667 375 5902 3 chr3B.!!$F9 5527
8 TraesCS3A01G479100 chr3D 575546577 575548575 1998 False 2641.000000 2641 90.578000 2897 4891 1 chr3D.!!$F1 1994
9 TraesCS3A01G479100 chr3D 574768141 574772269 4128 True 2292.000000 2497 87.664500 10 4902 2 chr3D.!!$R3 4892
10 TraesCS3A01G479100 chr3D 575485908 575490036 4128 False 2292.000000 2497 87.664500 10 4902 2 chr3D.!!$F3 4892
11 TraesCS3A01G479100 chr3D 575527340 575530598 3258 False 1705.000000 2505 90.473000 2871 5903 2 chr3D.!!$F4 3032
12 TraesCS3A01G479100 chr3D 574781940 574783104 1164 True 1158.000000 1158 84.720000 744 1913 1 chr3D.!!$R2 1169

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
349 395 0.107993 TGGAGCAAGCGAGGAATCTG 60.108 55.000 0.00 0.00 0.00 2.90 F
1134 2290 0.744874 AGCTGACATTGATGCATGCC 59.255 50.000 16.68 0.28 0.00 4.40 F
2136 3804 0.392060 ATCGGTTTTGTACTCCCGCC 60.392 55.000 0.00 0.00 40.23 6.13 F
2138 3806 0.675522 CGGTTTTGTACTCCCGCCAT 60.676 55.000 0.00 0.00 33.20 4.40 F
2207 3875 1.202348 GCCACCAACAGTAATCAAGGC 59.798 52.381 0.00 0.00 0.00 4.35 F
2310 3978 1.674359 TTCTTGAATGCACGTGGTGT 58.326 45.000 18.88 0.00 35.75 4.16 F
2311 3979 2.535012 TCTTGAATGCACGTGGTGTA 57.465 45.000 18.88 0.00 35.75 2.90 F
4539 6278 1.534595 GACTCTGCCTGCTCTTGTTTG 59.465 52.381 0.00 0.00 0.00 2.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1167 2323 0.473694 TGACCCCCTCTTCAAGCTGA 60.474 55.000 0.00 0.00 0.00 4.26 R
2187 3855 1.202348 GCCTTGATTACTGTTGGTGGC 59.798 52.381 0.00 0.00 0.00 5.01 R
3990 5729 1.918957 ACTGCAGCTTCCCTATTTCCT 59.081 47.619 15.27 0.00 0.00 3.36 R
4101 5840 5.354513 CCAGATGGCAGCTTCATATCATAAG 59.645 44.000 0.62 0.00 0.00 1.73 R
4419 6158 1.392589 AATCCATGACGGCAATGTCC 58.607 50.000 0.00 0.00 38.11 4.02 R
4539 6278 6.312426 CACAGAACAATCCAGTATCTGAAGAC 59.688 42.308 7.98 0.00 39.85 3.01 R
4666 6438 1.813513 CTGCTCCTCGTGGAAACATT 58.186 50.000 7.75 0.00 46.14 2.71 R
5625 7735 0.883153 GCAGTGCCACATGTGAATGA 59.117 50.000 27.46 4.76 0.00 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 7.716123 AGAGAATGAACATGAGGAATTGATCTC 59.284 37.037 0.00 1.15 0.00 2.75
33 38 6.420638 ACATGAGGAATTGATCTCATCACAA 58.579 36.000 0.00 0.00 45.68 3.33
77 84 1.917872 AAAATGGGTACGCATGGTGT 58.082 45.000 24.37 7.53 0.00 4.16
102 114 4.496673 GCGTCGTGCCCAATTTGATTAATA 60.497 41.667 0.00 0.00 37.76 0.98
108 120 6.042143 GTGCCCAATTTGATTAATACCACAG 58.958 40.000 0.00 0.00 0.00 3.66
141 153 6.203530 TGTCAGTCTTTCTGTCTAATGCAAAG 59.796 38.462 0.00 0.00 43.97 2.77
174 186 2.192664 TAGAGGCATCTCTCTAGGCG 57.807 55.000 3.06 0.00 46.79 5.52
192 204 2.509870 GCGATGCAAACTAAGCAGTTC 58.490 47.619 0.00 0.00 44.41 3.01
198 213 5.371115 TGCAAACTAAGCAGTTCATAACC 57.629 39.130 0.00 0.00 44.41 2.85
210 225 5.689819 CAGTTCATAACCAAACTAGTGCAC 58.310 41.667 9.40 9.40 34.05 4.57
211 226 5.238432 CAGTTCATAACCAAACTAGTGCACA 59.762 40.000 21.04 4.13 34.05 4.57
212 227 6.003950 AGTTCATAACCAAACTAGTGCACAT 58.996 36.000 21.04 6.83 34.05 3.21
213 228 5.878332 TCATAACCAAACTAGTGCACATG 57.122 39.130 21.04 13.38 0.00 3.21
276 298 2.490328 TTCACAAGCGCCAAAGAAAG 57.510 45.000 2.29 0.00 0.00 2.62
278 300 0.667993 CACAAGCGCCAAAGAAAGGA 59.332 50.000 2.29 0.00 0.00 3.36
330 356 7.982354 GGAGTAATTAACTAGAGTTGCTCACAT 59.018 37.037 5.15 0.00 39.07 3.21
349 395 0.107993 TGGAGCAAGCGAGGAATCTG 60.108 55.000 0.00 0.00 0.00 2.90
366 412 7.687941 GGAATCTGTCCTGACATTTTTCTTA 57.312 36.000 0.00 0.00 43.98 2.10
445 496 1.007271 CGGTCACTGCAGTCGAAGT 60.007 57.895 18.64 0.00 0.00 3.01
498 644 1.874019 CGCATCGACCGACCTTCAG 60.874 63.158 1.37 0.00 0.00 3.02
646 1604 1.101049 GTGATTGGTGGGGCGGTATG 61.101 60.000 0.00 0.00 0.00 2.39
663 1623 5.365619 CGGTATGATTAGTTTAACCCAGCT 58.634 41.667 0.00 0.00 0.00 4.24
672 1632 5.306114 AGTTTAACCCAGCTAGTTCAGTT 57.694 39.130 4.66 0.00 0.00 3.16
673 1633 5.691896 AGTTTAACCCAGCTAGTTCAGTTT 58.308 37.500 4.66 0.00 0.00 2.66
776 1739 2.191375 CGCTGATGCATGGGACCT 59.809 61.111 2.46 0.00 39.64 3.85
797 1760 3.947132 CTGTCTGACAGGCCCGCAG 62.947 68.421 26.36 4.77 42.35 5.18
836 1800 5.062308 GCCATTATCGTCGTATCCAATCTTC 59.938 44.000 0.00 0.00 0.00 2.87
843 1807 4.152526 GTCGTATCCAATCTTCGATCTCG 58.847 47.826 0.00 0.00 41.45 4.04
877 1843 6.893020 AGAATTATGTACTCCCCAACTCTT 57.107 37.500 0.00 0.00 0.00 2.85
915 2071 6.038936 GTCTAGTTTCTCCTCTAGGACATGAC 59.961 46.154 0.00 0.00 39.78 3.06
964 2120 1.824230 CTGTAGCACTTCCAGCTCTCT 59.176 52.381 0.00 0.00 42.32 3.10
997 2153 2.766400 CCACGAGAGAGGTCGAGGC 61.766 68.421 0.00 0.00 42.53 4.70
998 2154 2.041115 CACGAGAGAGGTCGAGGCA 61.041 63.158 0.00 0.00 42.85 4.75
1072 2228 2.755876 TCATCGGCGAGCTCACCT 60.756 61.111 18.39 0.00 0.00 4.00
1099 2255 2.957402 ACAAGTGAGGAAAGGCATCA 57.043 45.000 0.00 0.00 34.44 3.07
1134 2290 0.744874 AGCTGACATTGATGCATGCC 59.255 50.000 16.68 0.28 0.00 4.40
1137 2293 1.033202 TGACATTGATGCATGCCGCT 61.033 50.000 16.68 0.00 43.06 5.52
1141 2297 1.170919 ATTGATGCATGCCGCTCTCC 61.171 55.000 16.68 0.00 43.06 3.71
1167 2323 3.365535 GCAAAAGTGCCGGTGGAT 58.634 55.556 1.90 0.00 45.68 3.41
1197 2353 2.003548 GGGGGTCAAGATCTGGGCT 61.004 63.158 0.78 0.00 0.00 5.19
1204 2360 3.117888 GGTCAAGATCTGGGCTGGAAATA 60.118 47.826 0.78 0.00 0.00 1.40
1212 2368 3.723681 TCTGGGCTGGAAATATCAAGGAT 59.276 43.478 0.00 0.00 0.00 3.24
1215 2371 6.024563 TGGGCTGGAAATATCAAGGATTTA 57.975 37.500 0.00 0.00 0.00 1.40
1237 2393 5.732331 ATCCTACCAAATGGAGGAAATCA 57.268 39.130 18.39 3.26 41.48 2.57
1264 2420 1.124780 TTTCAAGGTCCACGTGGAGA 58.875 50.000 37.04 26.44 46.49 3.71
1269 2425 1.078426 GGTCCACGTGGAGAATGGG 60.078 63.158 37.04 7.85 46.49 4.00
1278 2434 2.360191 GAGAATGGGGGCAAGCCA 59.640 61.111 13.87 0.00 37.98 4.75
1285 2441 2.524148 GGGGCAAGCCAACCAACT 60.524 61.111 13.87 0.00 37.98 3.16
1326 2482 7.164803 AGAAGATACTCAAGAAGGTCAAAAGG 58.835 38.462 0.00 0.00 0.00 3.11
1363 2519 4.339748 CAAGGATCTCCATCGGATCTCTA 58.660 47.826 0.00 0.00 39.41 2.43
1383 2539 2.880963 ATGCTCTAGAAGAAGCGGTC 57.119 50.000 0.00 0.00 0.00 4.79
1386 2542 1.204941 GCTCTAGAAGAAGCGGTCCAA 59.795 52.381 0.00 0.00 0.00 3.53
1396 2552 0.685097 AGCGGTCCAACAAGCTAAGA 59.315 50.000 0.00 0.00 38.29 2.10
1596 2752 4.806247 CCATTGAAGACGGTCTCTATTGTC 59.194 45.833 11.71 4.77 0.00 3.18
1608 2764 3.517901 TCTCTATTGTCGGATTTGGTGGT 59.482 43.478 0.00 0.00 0.00 4.16
1658 2814 2.620251 TATGACCAGATCAAAGGGCG 57.380 50.000 0.00 0.00 41.93 6.13
1717 2873 3.881089 TCCCGACAAGAAGAAAGTTTTCC 59.119 43.478 1.16 0.00 37.92 3.13
1746 2902 9.829507 AATATTCTCTATGGACTTGACAAGAAG 57.170 33.333 21.95 10.13 0.00 2.85
1754 2910 5.551233 TGGACTTGACAAGAAGAAGTATGG 58.449 41.667 21.95 0.00 30.01 2.74
1768 2924 6.239217 AGAAGTATGGACACATTCATAGCA 57.761 37.500 0.00 0.00 38.53 3.49
1830 2986 3.604875 TTCCTTAACGGCAAGAGGTAG 57.395 47.619 0.24 0.00 0.00 3.18
1928 3119 1.462616 CATCCGGTGCAGATTTTGGA 58.537 50.000 0.00 0.00 0.00 3.53
1943 3139 3.851128 GGAGGGTCTAGGCGCACC 61.851 72.222 14.41 13.10 0.00 5.01
1947 3143 3.537874 GGTCTAGGCGCACCCGAT 61.538 66.667 10.83 0.00 39.21 4.18
2056 3724 6.072948 CGGACAACATGACTTTTGTGGTATTA 60.073 38.462 0.00 0.00 36.06 0.98
2060 3728 8.637986 ACAACATGACTTTTGTGGTATTATTGT 58.362 29.630 0.00 0.00 34.61 2.71
2061 3729 9.474920 CAACATGACTTTTGTGGTATTATTGTT 57.525 29.630 0.00 0.00 0.00 2.83
2062 3730 9.474920 AACATGACTTTTGTGGTATTATTGTTG 57.525 29.630 0.00 0.00 0.00 3.33
2129 3797 7.524065 AGCTTAACATTGTATCGGTTTTGTAC 58.476 34.615 0.00 0.00 0.00 2.90
2130 3798 7.389607 AGCTTAACATTGTATCGGTTTTGTACT 59.610 33.333 0.00 0.00 0.00 2.73
2131 3799 7.691050 GCTTAACATTGTATCGGTTTTGTACTC 59.309 37.037 0.00 0.00 0.00 2.59
2132 3800 6.490566 AACATTGTATCGGTTTTGTACTCC 57.509 37.500 0.00 0.00 0.00 3.85
2133 3801 4.939439 ACATTGTATCGGTTTTGTACTCCC 59.061 41.667 0.00 0.00 0.00 4.30
2134 3802 3.235157 TGTATCGGTTTTGTACTCCCG 57.765 47.619 0.00 0.67 41.75 5.14
2135 3803 1.929169 GTATCGGTTTTGTACTCCCGC 59.071 52.381 0.00 0.00 40.23 6.13
2136 3804 0.392060 ATCGGTTTTGTACTCCCGCC 60.392 55.000 0.00 0.00 40.23 6.13
2137 3805 1.301874 CGGTTTTGTACTCCCGCCA 60.302 57.895 0.00 0.00 33.20 5.69
2138 3806 0.675522 CGGTTTTGTACTCCCGCCAT 60.676 55.000 0.00 0.00 33.20 4.40
2139 3807 1.541379 GGTTTTGTACTCCCGCCATT 58.459 50.000 0.00 0.00 0.00 3.16
2140 3808 1.890489 GGTTTTGTACTCCCGCCATTT 59.110 47.619 0.00 0.00 0.00 2.32
2141 3809 3.083293 GGTTTTGTACTCCCGCCATTTA 58.917 45.455 0.00 0.00 0.00 1.40
2142 3810 3.119743 GGTTTTGTACTCCCGCCATTTAC 60.120 47.826 0.00 0.00 0.00 2.01
2143 3811 3.706600 TTTGTACTCCCGCCATTTACT 57.293 42.857 0.00 0.00 0.00 2.24
2144 3812 3.706600 TTGTACTCCCGCCATTTACTT 57.293 42.857 0.00 0.00 0.00 2.24
2145 3813 4.822685 TTGTACTCCCGCCATTTACTTA 57.177 40.909 0.00 0.00 0.00 2.24
2146 3814 5.362105 TTGTACTCCCGCCATTTACTTAT 57.638 39.130 0.00 0.00 0.00 1.73
2147 3815 6.482898 TTGTACTCCCGCCATTTACTTATA 57.517 37.500 0.00 0.00 0.00 0.98
2148 3816 5.846203 TGTACTCCCGCCATTTACTTATAC 58.154 41.667 0.00 0.00 0.00 1.47
2149 3817 5.363292 TGTACTCCCGCCATTTACTTATACA 59.637 40.000 0.00 0.00 0.00 2.29
2150 3818 5.362105 ACTCCCGCCATTTACTTATACAA 57.638 39.130 0.00 0.00 0.00 2.41
2151 3819 5.365619 ACTCCCGCCATTTACTTATACAAG 58.634 41.667 0.00 0.00 37.81 3.16
2152 3820 4.710324 TCCCGCCATTTACTTATACAAGG 58.290 43.478 0.00 0.00 35.97 3.61
2153 3821 3.252458 CCCGCCATTTACTTATACAAGGC 59.748 47.826 0.00 0.00 35.97 4.35
2154 3822 3.252458 CCGCCATTTACTTATACAAGGCC 59.748 47.826 0.00 0.00 37.62 5.19
2155 3823 3.880490 CGCCATTTACTTATACAAGGCCA 59.120 43.478 5.01 0.00 37.62 5.36
2156 3824 4.261031 CGCCATTTACTTATACAAGGCCAC 60.261 45.833 5.01 0.00 37.62 5.01
2157 3825 4.887655 GCCATTTACTTATACAAGGCCACT 59.112 41.667 5.01 0.00 35.97 4.00
2158 3826 6.059484 GCCATTTACTTATACAAGGCCACTA 58.941 40.000 5.01 0.00 35.97 2.74
2159 3827 6.715264 GCCATTTACTTATACAAGGCCACTAT 59.285 38.462 5.01 0.00 35.97 2.12
2160 3828 7.308589 GCCATTTACTTATACAAGGCCACTATG 60.309 40.741 5.01 0.21 35.97 2.23
2161 3829 7.174946 CCATTTACTTATACAAGGCCACTATGG 59.825 40.741 5.01 0.00 36.51 2.74
2162 3830 7.440505 TTTACTTATACAAGGCCACTATGGA 57.559 36.000 5.01 0.00 36.40 3.41
2163 3831 5.968676 ACTTATACAAGGCCACTATGGAA 57.031 39.130 5.01 0.00 36.40 3.53
2164 3832 6.515512 ACTTATACAAGGCCACTATGGAAT 57.484 37.500 5.01 0.00 36.40 3.01
2165 3833 7.626999 ACTTATACAAGGCCACTATGGAATA 57.373 36.000 5.01 0.00 36.40 1.75
2166 3834 8.219660 ACTTATACAAGGCCACTATGGAATAT 57.780 34.615 5.01 0.00 36.40 1.28
2167 3835 9.333961 ACTTATACAAGGCCACTATGGAATATA 57.666 33.333 5.01 0.00 36.40 0.86
2168 3836 9.601217 CTTATACAAGGCCACTATGGAATATAC 57.399 37.037 5.01 0.00 40.96 1.47
2169 3837 5.904984 ACAAGGCCACTATGGAATATACA 57.095 39.130 5.01 0.00 40.96 2.29
2170 3838 6.454223 ACAAGGCCACTATGGAATATACAT 57.546 37.500 5.01 0.00 40.96 2.29
2171 3839 6.852404 ACAAGGCCACTATGGAATATACATT 58.148 36.000 5.01 0.00 40.96 2.71
2172 3840 7.297614 ACAAGGCCACTATGGAATATACATTT 58.702 34.615 5.01 0.00 40.96 2.32
2173 3841 7.784550 ACAAGGCCACTATGGAATATACATTTT 59.215 33.333 5.01 0.00 40.96 1.82
2174 3842 7.765695 AGGCCACTATGGAATATACATTTTG 57.234 36.000 5.01 0.00 40.96 2.44
2175 3843 6.209391 AGGCCACTATGGAATATACATTTTGC 59.791 38.462 5.01 0.00 40.96 3.68
2176 3844 6.015519 GGCCACTATGGAATATACATTTTGCA 60.016 38.462 0.00 0.00 40.96 4.08
2177 3845 7.309990 GGCCACTATGGAATATACATTTTGCAT 60.310 37.037 0.00 5.15 40.96 3.96
2178 3846 7.756722 GCCACTATGGAATATACATTTTGCATC 59.243 37.037 0.00 0.00 40.96 3.91
2179 3847 9.017509 CCACTATGGAATATACATTTTGCATCT 57.982 33.333 3.41 0.00 40.96 2.90
2189 3857 5.520376 ACATTTTGCATCTATACAAGGCC 57.480 39.130 0.00 0.00 0.00 5.19
2190 3858 4.955450 ACATTTTGCATCTATACAAGGCCA 59.045 37.500 5.01 0.00 0.00 5.36
2191 3859 4.981806 TTTTGCATCTATACAAGGCCAC 57.018 40.909 5.01 0.00 0.00 5.01
2192 3860 2.638480 TGCATCTATACAAGGCCACC 57.362 50.000 5.01 0.00 0.00 4.61
2193 3861 1.843206 TGCATCTATACAAGGCCACCA 59.157 47.619 5.01 0.00 0.00 4.17
2194 3862 2.240921 TGCATCTATACAAGGCCACCAA 59.759 45.455 5.01 0.00 0.00 3.67
2195 3863 2.618709 GCATCTATACAAGGCCACCAAC 59.381 50.000 5.01 0.00 0.00 3.77
2196 3864 3.884895 CATCTATACAAGGCCACCAACA 58.115 45.455 5.01 0.00 0.00 3.33
2197 3865 3.627395 TCTATACAAGGCCACCAACAG 57.373 47.619 5.01 0.00 0.00 3.16
2198 3866 2.910319 TCTATACAAGGCCACCAACAGT 59.090 45.455 5.01 0.00 0.00 3.55
2199 3867 4.098155 TCTATACAAGGCCACCAACAGTA 58.902 43.478 5.01 0.00 0.00 2.74
2200 3868 3.799432 ATACAAGGCCACCAACAGTAA 57.201 42.857 5.01 0.00 0.00 2.24
2201 3869 2.675658 ACAAGGCCACCAACAGTAAT 57.324 45.000 5.01 0.00 0.00 1.89
2202 3870 2.514803 ACAAGGCCACCAACAGTAATC 58.485 47.619 5.01 0.00 0.00 1.75
2203 3871 2.158534 ACAAGGCCACCAACAGTAATCA 60.159 45.455 5.01 0.00 0.00 2.57
2204 3872 2.890311 CAAGGCCACCAACAGTAATCAA 59.110 45.455 5.01 0.00 0.00 2.57
2205 3873 2.795329 AGGCCACCAACAGTAATCAAG 58.205 47.619 5.01 0.00 0.00 3.02
2206 3874 1.818674 GGCCACCAACAGTAATCAAGG 59.181 52.381 0.00 0.00 0.00 3.61
2207 3875 1.202348 GCCACCAACAGTAATCAAGGC 59.798 52.381 0.00 0.00 0.00 4.35
2208 3876 2.513753 CCACCAACAGTAATCAAGGCA 58.486 47.619 0.00 0.00 0.00 4.75
2209 3877 2.890311 CCACCAACAGTAATCAAGGCAA 59.110 45.455 0.00 0.00 0.00 4.52
2210 3878 3.320541 CCACCAACAGTAATCAAGGCAAA 59.679 43.478 0.00 0.00 0.00 3.68
2211 3879 4.202202 CCACCAACAGTAATCAAGGCAAAA 60.202 41.667 0.00 0.00 0.00 2.44
2212 3880 5.355596 CACCAACAGTAATCAAGGCAAAAA 58.644 37.500 0.00 0.00 0.00 1.94
2213 3881 5.990996 CACCAACAGTAATCAAGGCAAAAAT 59.009 36.000 0.00 0.00 0.00 1.82
2214 3882 6.482973 CACCAACAGTAATCAAGGCAAAAATT 59.517 34.615 0.00 0.00 0.00 1.82
2215 3883 7.655328 CACCAACAGTAATCAAGGCAAAAATTA 59.345 33.333 0.00 0.00 0.00 1.40
2216 3884 8.207545 ACCAACAGTAATCAAGGCAAAAATTAA 58.792 29.630 0.00 0.00 0.00 1.40
2217 3885 9.218440 CCAACAGTAATCAAGGCAAAAATTAAT 57.782 29.630 0.00 0.00 0.00 1.40
2219 3887 9.995003 AACAGTAATCAAGGCAAAAATTAATGA 57.005 25.926 12.44 0.00 34.81 2.57
2227 3895 8.782144 TCAAGGCAAAAATTAATGATGTTTTCC 58.218 29.630 0.00 0.00 30.76 3.13
2228 3896 8.566260 CAAGGCAAAAATTAATGATGTTTTCCA 58.434 29.630 0.00 0.00 32.46 3.53
2229 3897 8.688747 AGGCAAAAATTAATGATGTTTTCCAA 57.311 26.923 0.00 0.00 32.46 3.53
2230 3898 8.567104 AGGCAAAAATTAATGATGTTTTCCAAC 58.433 29.630 0.00 0.00 32.46 3.77
2231 3899 8.567104 GGCAAAAATTAATGATGTTTTCCAACT 58.433 29.630 0.00 0.00 30.96 3.16
2232 3900 9.949174 GCAAAAATTAATGATGTTTTCCAACTT 57.051 25.926 0.00 0.00 33.58 2.66
2245 3913 8.413899 TGTTTTCCAACTTGTTTAATACTTGC 57.586 30.769 0.00 0.00 33.58 4.01
2246 3914 8.035394 TGTTTTCCAACTTGTTTAATACTTGCA 58.965 29.630 0.00 0.00 33.58 4.08
2247 3915 9.040939 GTTTTCCAACTTGTTTAATACTTGCAT 57.959 29.630 0.00 0.00 0.00 3.96
2248 3916 8.586570 TTTCCAACTTGTTTAATACTTGCATG 57.413 30.769 0.00 0.00 0.00 4.06
2249 3917 6.155827 TCCAACTTGTTTAATACTTGCATGC 58.844 36.000 11.82 11.82 0.00 4.06
2250 3918 5.925397 CCAACTTGTTTAATACTTGCATGCA 59.075 36.000 18.46 18.46 0.00 3.96
2251 3919 6.591062 CCAACTTGTTTAATACTTGCATGCAT 59.409 34.615 23.37 10.46 0.00 3.96
2252 3920 7.412129 CCAACTTGTTTAATACTTGCATGCATG 60.412 37.037 26.93 26.93 0.00 4.06
2253 3921 6.690530 ACTTGTTTAATACTTGCATGCATGT 58.309 32.000 33.40 33.40 37.87 3.21
2254 3922 7.825681 ACTTGTTTAATACTTGCATGCATGTA 58.174 30.769 34.92 34.92 39.65 2.29
2255 3923 7.970061 ACTTGTTTAATACTTGCATGCATGTAG 59.030 33.333 35.26 27.26 39.04 2.74
2256 3924 7.389803 TGTTTAATACTTGCATGCATGTAGT 57.610 32.000 35.26 34.72 39.04 2.73
2257 3925 7.471721 TGTTTAATACTTGCATGCATGTAGTC 58.528 34.615 35.19 25.74 39.04 2.59
2258 3926 7.120432 TGTTTAATACTTGCATGCATGTAGTCA 59.880 33.333 35.19 27.32 39.04 3.41
2259 3927 7.806409 TTAATACTTGCATGCATGTAGTCAT 57.194 32.000 35.19 26.22 39.04 3.06
2260 3928 8.900983 TTAATACTTGCATGCATGTAGTCATA 57.099 30.769 35.19 25.50 39.04 2.15
2261 3929 7.806409 AATACTTGCATGCATGTAGTCATAA 57.194 32.000 35.26 22.09 39.04 1.90
2262 3930 7.991084 ATACTTGCATGCATGTAGTCATAAT 57.009 32.000 35.26 23.00 39.04 1.28
2263 3931 6.068473 ACTTGCATGCATGTAGTCATAATG 57.932 37.500 31.27 7.37 33.44 1.90
2264 3932 5.824097 ACTTGCATGCATGTAGTCATAATGA 59.176 36.000 31.27 7.97 33.13 2.57
2265 3933 7.041848 TACTTGCATGCATGTAGTCATAATGAC 60.042 37.037 31.61 11.09 39.70 3.06
2279 3947 7.527084 GTCATAATGACACTCAACTACTTCC 57.473 40.000 0.00 0.00 46.22 3.46
2280 3948 7.324178 GTCATAATGACACTCAACTACTTCCT 58.676 38.462 0.00 0.00 46.22 3.36
2281 3949 7.489757 GTCATAATGACACTCAACTACTTCCTC 59.510 40.741 0.00 0.00 46.22 3.71
2282 3950 4.810191 ATGACACTCAACTACTTCCTCC 57.190 45.455 0.00 0.00 0.00 4.30
2283 3951 3.572642 TGACACTCAACTACTTCCTCCA 58.427 45.455 0.00 0.00 0.00 3.86
2284 3952 4.160329 TGACACTCAACTACTTCCTCCAT 58.840 43.478 0.00 0.00 0.00 3.41
2285 3953 4.593206 TGACACTCAACTACTTCCTCCATT 59.407 41.667 0.00 0.00 0.00 3.16
2286 3954 5.153950 ACACTCAACTACTTCCTCCATTC 57.846 43.478 0.00 0.00 0.00 2.67
2287 3955 4.593206 ACACTCAACTACTTCCTCCATTCA 59.407 41.667 0.00 0.00 0.00 2.57
2288 3956 5.071788 ACACTCAACTACTTCCTCCATTCAA 59.928 40.000 0.00 0.00 0.00 2.69
2289 3957 6.176183 CACTCAACTACTTCCTCCATTCAAT 58.824 40.000 0.00 0.00 0.00 2.57
2290 3958 6.656693 CACTCAACTACTTCCTCCATTCAATT 59.343 38.462 0.00 0.00 0.00 2.32
2291 3959 7.175641 CACTCAACTACTTCCTCCATTCAATTT 59.824 37.037 0.00 0.00 0.00 1.82
2292 3960 7.725844 ACTCAACTACTTCCTCCATTCAATTTT 59.274 33.333 0.00 0.00 0.00 1.82
2293 3961 8.110860 TCAACTACTTCCTCCATTCAATTTTC 57.889 34.615 0.00 0.00 0.00 2.29
2294 3962 7.944554 TCAACTACTTCCTCCATTCAATTTTCT 59.055 33.333 0.00 0.00 0.00 2.52
2295 3963 8.579863 CAACTACTTCCTCCATTCAATTTTCTT 58.420 33.333 0.00 0.00 0.00 2.52
2296 3964 8.115490 ACTACTTCCTCCATTCAATTTTCTTG 57.885 34.615 0.00 0.00 0.00 3.02
2297 3965 7.944554 ACTACTTCCTCCATTCAATTTTCTTGA 59.055 33.333 0.00 0.00 0.00 3.02
2298 3966 7.601705 ACTTCCTCCATTCAATTTTCTTGAA 57.398 32.000 3.15 3.15 41.91 2.69
2299 3967 8.198807 ACTTCCTCCATTCAATTTTCTTGAAT 57.801 30.769 7.24 7.24 46.59 2.57
2306 3974 5.886715 TTCAATTTTCTTGAATGCACGTG 57.113 34.783 12.28 12.28 33.90 4.49
2307 3975 4.297510 TCAATTTTCTTGAATGCACGTGG 58.702 39.130 18.88 0.00 0.00 4.94
2308 3976 4.050553 CAATTTTCTTGAATGCACGTGGT 58.949 39.130 18.88 0.00 0.00 4.16
2309 3977 2.772568 TTTCTTGAATGCACGTGGTG 57.227 45.000 18.88 0.00 36.51 4.17
2310 3978 1.674359 TTCTTGAATGCACGTGGTGT 58.326 45.000 18.88 0.00 35.75 4.16
2311 3979 2.535012 TCTTGAATGCACGTGGTGTA 57.465 45.000 18.88 0.00 35.75 2.90
2312 3980 3.052455 TCTTGAATGCACGTGGTGTAT 57.948 42.857 18.88 0.00 40.33 2.29
2314 3982 4.570930 TCTTGAATGCACGTGGTGTATTA 58.429 39.130 18.88 0.00 45.75 0.98
2315 3983 4.998033 TCTTGAATGCACGTGGTGTATTAA 59.002 37.500 18.88 2.82 45.75 1.40
2316 3984 5.470437 TCTTGAATGCACGTGGTGTATTAAA 59.530 36.000 18.88 9.71 45.75 1.52
2317 3985 5.888691 TGAATGCACGTGGTGTATTAAAT 57.111 34.783 18.88 0.00 45.75 1.40
2318 3986 5.635866 TGAATGCACGTGGTGTATTAAATG 58.364 37.500 18.88 0.00 45.75 2.32
2319 3987 5.412904 TGAATGCACGTGGTGTATTAAATGA 59.587 36.000 18.88 0.00 45.75 2.57
2320 3988 6.094742 TGAATGCACGTGGTGTATTAAATGAT 59.905 34.615 18.88 0.00 45.75 2.45
2321 3989 5.478233 TGCACGTGGTGTATTAAATGATC 57.522 39.130 18.88 0.00 35.75 2.92
2322 3990 4.334203 TGCACGTGGTGTATTAAATGATCC 59.666 41.667 18.88 0.00 35.75 3.36
2323 3991 4.261031 GCACGTGGTGTATTAAATGATCCC 60.261 45.833 18.88 0.00 35.75 3.85
2324 3992 4.878971 CACGTGGTGTATTAAATGATCCCA 59.121 41.667 7.95 0.00 0.00 4.37
2325 3993 5.007626 CACGTGGTGTATTAAATGATCCCAG 59.992 44.000 7.95 0.00 0.00 4.45
2326 3994 5.123227 CGTGGTGTATTAAATGATCCCAGT 58.877 41.667 0.00 0.00 0.00 4.00
2327 3995 6.126997 ACGTGGTGTATTAAATGATCCCAGTA 60.127 38.462 0.00 0.00 0.00 2.74
2328 3996 6.764085 CGTGGTGTATTAAATGATCCCAGTAA 59.236 38.462 0.00 0.00 0.00 2.24
2329 3997 7.281324 CGTGGTGTATTAAATGATCCCAGTAAA 59.719 37.037 0.00 0.00 0.00 2.01
2330 3998 8.403236 GTGGTGTATTAAATGATCCCAGTAAAC 58.597 37.037 0.00 0.00 0.00 2.01
2331 3999 8.110271 TGGTGTATTAAATGATCCCAGTAAACA 58.890 33.333 0.00 0.00 0.00 2.83
2332 4000 8.962679 GGTGTATTAAATGATCCCAGTAAACAA 58.037 33.333 0.00 0.00 0.00 2.83
2334 4002 9.967451 TGTATTAAATGATCCCAGTAAACAAGA 57.033 29.630 0.00 0.00 0.00 3.02
2338 4006 9.581289 TTAAATGATCCCAGTAAACAAGAAAGA 57.419 29.630 0.00 0.00 0.00 2.52
2339 4007 8.477419 AAATGATCCCAGTAAACAAGAAAGAA 57.523 30.769 0.00 0.00 0.00 2.52
2340 4008 8.477419 AATGATCCCAGTAAACAAGAAAGAAA 57.523 30.769 0.00 0.00 0.00 2.52
2341 4009 7.510549 TGATCCCAGTAAACAAGAAAGAAAG 57.489 36.000 0.00 0.00 0.00 2.62
2342 4010 7.287061 TGATCCCAGTAAACAAGAAAGAAAGA 58.713 34.615 0.00 0.00 0.00 2.52
2343 4011 7.944554 TGATCCCAGTAAACAAGAAAGAAAGAT 59.055 33.333 0.00 0.00 0.00 2.40
2344 4012 7.510549 TCCCAGTAAACAAGAAAGAAAGATG 57.489 36.000 0.00 0.00 0.00 2.90
2345 4013 6.490040 TCCCAGTAAACAAGAAAGAAAGATGG 59.510 38.462 0.00 0.00 0.00 3.51
2346 4014 6.490040 CCCAGTAAACAAGAAAGAAAGATGGA 59.510 38.462 0.00 0.00 0.00 3.41
2347 4015 7.014230 CCCAGTAAACAAGAAAGAAAGATGGAA 59.986 37.037 0.00 0.00 0.00 3.53
2348 4016 8.579863 CCAGTAAACAAGAAAGAAAGATGGAAT 58.420 33.333 0.00 0.00 0.00 3.01
2349 4017 9.403110 CAGTAAACAAGAAAGAAAGATGGAATG 57.597 33.333 0.00 0.00 0.00 2.67
2350 4018 8.084684 AGTAAACAAGAAAGAAAGATGGAATGC 58.915 33.333 0.00 0.00 0.00 3.56
2351 4019 6.409524 AACAAGAAAGAAAGATGGAATGCA 57.590 33.333 0.00 0.00 0.00 3.96
2352 4020 6.409524 ACAAGAAAGAAAGATGGAATGCAA 57.590 33.333 0.00 0.00 0.00 4.08
2353 4021 6.819284 ACAAGAAAGAAAGATGGAATGCAAA 58.181 32.000 0.00 0.00 0.00 3.68
2354 4022 7.274447 ACAAGAAAGAAAGATGGAATGCAAAA 58.726 30.769 0.00 0.00 0.00 2.44
2355 4023 7.225341 ACAAGAAAGAAAGATGGAATGCAAAAC 59.775 33.333 0.00 0.00 0.00 2.43
2356 4024 6.819284 AGAAAGAAAGATGGAATGCAAAACA 58.181 32.000 0.00 0.00 0.00 2.83
2357 4025 7.447594 AGAAAGAAAGATGGAATGCAAAACAT 58.552 30.769 0.00 0.00 42.30 2.71
2358 4026 7.386848 AGAAAGAAAGATGGAATGCAAAACATG 59.613 33.333 5.28 0.00 39.60 3.21
2359 4027 6.105397 AGAAAGATGGAATGCAAAACATGT 57.895 33.333 0.00 0.00 39.60 3.21
2360 4028 7.230849 AGAAAGATGGAATGCAAAACATGTA 57.769 32.000 0.00 0.00 39.60 2.29
2361 4029 7.844009 AGAAAGATGGAATGCAAAACATGTAT 58.156 30.769 0.00 0.00 39.60 2.29
2362 4030 8.316214 AGAAAGATGGAATGCAAAACATGTATT 58.684 29.630 0.00 0.00 45.58 1.89
2363 4031 9.585099 GAAAGATGGAATGCAAAACATGTATTA 57.415 29.630 0.00 0.00 43.35 0.98
2364 4032 9.941325 AAAGATGGAATGCAAAACATGTATTAA 57.059 25.926 0.00 0.00 43.35 1.40
2365 4033 9.941325 AAGATGGAATGCAAAACATGTATTAAA 57.059 25.926 0.00 0.00 43.35 1.52
2392 4060 9.802039 TTTTACCTTGGTATCTGTAATTTGAGT 57.198 29.630 0.00 0.00 0.00 3.41
2393 4061 9.802039 TTTACCTTGGTATCTGTAATTTGAGTT 57.198 29.630 0.00 0.00 0.00 3.01
2394 4062 9.802039 TTACCTTGGTATCTGTAATTTGAGTTT 57.198 29.630 0.00 0.00 0.00 2.66
2395 4063 8.110860 ACCTTGGTATCTGTAATTTGAGTTTG 57.889 34.615 0.00 0.00 0.00 2.93
2396 4064 7.724061 ACCTTGGTATCTGTAATTTGAGTTTGT 59.276 33.333 0.00 0.00 0.00 2.83
2397 4065 8.023128 CCTTGGTATCTGTAATTTGAGTTTGTG 58.977 37.037 0.00 0.00 0.00 3.33
2398 4066 7.447374 TGGTATCTGTAATTTGAGTTTGTGG 57.553 36.000 0.00 0.00 0.00 4.17
2399 4067 6.072175 TGGTATCTGTAATTTGAGTTTGTGGC 60.072 38.462 0.00 0.00 0.00 5.01
2400 4068 4.846779 TCTGTAATTTGAGTTTGTGGCC 57.153 40.909 0.00 0.00 0.00 5.36
2401 4069 4.469657 TCTGTAATTTGAGTTTGTGGCCT 58.530 39.130 3.32 0.00 0.00 5.19
2402 4070 4.892934 TCTGTAATTTGAGTTTGTGGCCTT 59.107 37.500 3.32 0.00 0.00 4.35
2403 4071 4.942852 TGTAATTTGAGTTTGTGGCCTTG 58.057 39.130 3.32 0.00 0.00 3.61
2404 4072 4.404073 TGTAATTTGAGTTTGTGGCCTTGT 59.596 37.500 3.32 0.00 0.00 3.16
2405 4073 5.594725 TGTAATTTGAGTTTGTGGCCTTGTA 59.405 36.000 3.32 0.00 0.00 2.41
2406 4074 5.806654 AATTTGAGTTTGTGGCCTTGTAT 57.193 34.783 3.32 0.00 0.00 2.29
2407 4075 6.909550 AATTTGAGTTTGTGGCCTTGTATA 57.090 33.333 3.32 0.00 0.00 1.47
2408 4076 7.480760 AATTTGAGTTTGTGGCCTTGTATAT 57.519 32.000 3.32 0.00 0.00 0.86
2409 4077 8.588290 AATTTGAGTTTGTGGCCTTGTATATA 57.412 30.769 3.32 0.00 0.00 0.86
2410 4078 8.588290 ATTTGAGTTTGTGGCCTTGTATATAA 57.412 30.769 3.32 0.00 0.00 0.98
2411 4079 8.410673 TTTGAGTTTGTGGCCTTGTATATAAA 57.589 30.769 3.32 0.00 0.00 1.40
2412 4080 8.410673 TTGAGTTTGTGGCCTTGTATATAAAA 57.589 30.769 3.32 0.00 0.00 1.52
2413 4081 8.410673 TGAGTTTGTGGCCTTGTATATAAAAA 57.589 30.769 3.32 0.00 0.00 1.94
2414 4082 9.030452 TGAGTTTGTGGCCTTGTATATAAAAAT 57.970 29.630 3.32 0.00 0.00 1.82
2415 4083 9.301153 GAGTTTGTGGCCTTGTATATAAAAATG 57.699 33.333 3.32 0.00 0.00 2.32
2416 4084 8.257306 AGTTTGTGGCCTTGTATATAAAAATGG 58.743 33.333 3.32 0.00 0.00 3.16
2417 4085 7.962995 TTGTGGCCTTGTATATAAAAATGGA 57.037 32.000 3.32 0.00 0.00 3.41
2418 4086 7.581213 TGTGGCCTTGTATATAAAAATGGAG 57.419 36.000 3.32 0.00 0.00 3.86
2419 4087 6.549364 TGTGGCCTTGTATATAAAAATGGAGG 59.451 38.462 3.32 0.00 0.00 4.30
2420 4088 6.015434 GTGGCCTTGTATATAAAAATGGAGGG 60.015 42.308 3.32 0.00 0.00 4.30
2421 4089 6.126038 TGGCCTTGTATATAAAAATGGAGGGA 60.126 38.462 3.32 0.00 0.00 4.20
2422 4090 6.434340 GGCCTTGTATATAAAAATGGAGGGAG 59.566 42.308 0.00 0.00 0.00 4.30
2423 4091 7.004691 GCCTTGTATATAAAAATGGAGGGAGT 58.995 38.462 0.00 0.00 0.00 3.85
2424 4092 8.161425 GCCTTGTATATAAAAATGGAGGGAGTA 58.839 37.037 0.00 0.00 0.00 2.59
2502 4171 6.743575 AATACACTAGACAATGGTTGCTTC 57.256 37.500 0.00 0.00 0.00 3.86
2505 4174 3.935203 CACTAGACAATGGTTGCTTCGAT 59.065 43.478 0.00 0.00 0.00 3.59
2506 4175 4.393062 CACTAGACAATGGTTGCTTCGATT 59.607 41.667 0.00 0.00 0.00 3.34
2507 4176 5.003804 ACTAGACAATGGTTGCTTCGATTT 58.996 37.500 0.00 0.00 0.00 2.17
2508 4177 4.853924 AGACAATGGTTGCTTCGATTTT 57.146 36.364 0.00 0.00 0.00 1.82
2596 4267 4.827284 CCCATATGTCCCAAGGTGTATTTC 59.173 45.833 1.24 0.00 0.00 2.17
2834 4565 3.764434 TGTGTGGAATCTAGGTCTCAGAC 59.236 47.826 0.00 0.00 0.00 3.51
2860 4591 9.950680 CTATGCAATTTGGTCGAGTTATAAATT 57.049 29.630 0.00 0.00 32.82 1.82
3074 4812 3.121279 CCGACTAATCACAACAACTCGTG 59.879 47.826 0.00 0.00 34.34 4.35
3142 4880 8.696410 TTTACAAAATGAAACCACTTTCTGAC 57.304 30.769 0.00 0.00 37.30 3.51
3528 5267 6.633668 CGAAGGTCTTGTTTACAGTGATAG 57.366 41.667 0.00 0.00 0.00 2.08
3601 5340 4.926238 GTGAATAGAAGTATGATCCAGCCG 59.074 45.833 0.00 0.00 0.00 5.52
3990 5729 3.655777 ACTCATGTTAAGGACCTTCCCAA 59.344 43.478 10.87 0.00 37.19 4.12
4091 5830 5.386958 TCAACTAAGACGTCTAATGTGCT 57.613 39.130 20.39 3.44 0.00 4.40
4101 5840 4.142902 ACGTCTAATGTGCTTGTATGTTGC 60.143 41.667 0.00 0.00 0.00 4.17
4539 6278 1.534595 GACTCTGCCTGCTCTTGTTTG 59.465 52.381 0.00 0.00 0.00 2.93
4557 6296 7.388776 TCTTGTTTGTCTTCAGATACTGGATTG 59.611 37.037 0.00 0.00 31.51 2.67
4666 6438 1.063792 AGTATTGGTGCCATGCCATCA 60.064 47.619 0.00 0.00 35.71 3.07
4721 6493 3.394606 ACACCTTGAGTTCACCTTACCAT 59.605 43.478 0.00 0.00 0.00 3.55
4794 6641 2.202492 CGAGCGAGTCAGGGTTCG 60.202 66.667 0.00 0.00 39.69 3.95
4834 6697 1.690219 GCCGTCAGGAGGTGGATGAT 61.690 60.000 0.00 0.00 41.02 2.45
4835 6698 0.105593 CCGTCAGGAGGTGGATGATG 59.894 60.000 0.00 0.00 41.02 3.07
4836 6699 1.114627 CGTCAGGAGGTGGATGATGA 58.885 55.000 0.00 0.00 32.78 2.92
4931 6820 4.076394 GCAAAGGGAAAGGTACATACACA 58.924 43.478 0.00 0.00 0.00 3.72
4932 6821 4.705023 GCAAAGGGAAAGGTACATACACAT 59.295 41.667 0.00 0.00 0.00 3.21
4933 6822 5.163652 GCAAAGGGAAAGGTACATACACATC 60.164 44.000 0.00 0.00 0.00 3.06
4935 6824 5.975988 AGGGAAAGGTACATACACATCAT 57.024 39.130 0.00 0.00 0.00 2.45
4936 6825 5.930135 AGGGAAAGGTACATACACATCATC 58.070 41.667 0.00 0.00 0.00 2.92
4937 6826 5.667626 AGGGAAAGGTACATACACATCATCT 59.332 40.000 0.00 0.00 0.00 2.90
4939 6828 6.408092 GGGAAAGGTACATACACATCATCTGA 60.408 42.308 0.00 0.00 0.00 3.27
4940 6829 7.220030 GGAAAGGTACATACACATCATCTGAT 58.780 38.462 0.00 0.00 34.56 2.90
4963 6866 5.600696 TGACGCATCATATGTACATTGTCT 58.399 37.500 14.77 0.00 0.00 3.41
4965 6868 4.991056 ACGCATCATATGTACATTGTCTCC 59.009 41.667 14.77 0.00 0.00 3.71
5000 6944 1.314730 TTCTTTGTTTCAGGCGGACC 58.685 50.000 0.00 0.00 0.00 4.46
5008 6952 2.436646 CAGGCGGACCAAGCGATT 60.437 61.111 0.00 0.00 39.06 3.34
5009 6953 2.436646 AGGCGGACCAAGCGATTG 60.437 61.111 6.39 6.39 39.06 2.67
5011 6955 2.464459 GGCGGACCAAGCGATTGAG 61.464 63.158 16.33 7.65 35.26 3.02
5021 6982 2.656651 CGATTGAGGCTCGCGAGG 60.657 66.667 35.10 18.35 0.00 4.63
5066 7057 1.222567 AGTCCCTTGTTTCCACACCT 58.777 50.000 0.00 0.00 30.32 4.00
5067 7058 1.569072 AGTCCCTTGTTTCCACACCTT 59.431 47.619 0.00 0.00 30.32 3.50
5082 7073 4.582656 CCACACCTTGTGTTTTATTCCTCA 59.417 41.667 5.62 0.00 45.08 3.86
5128 7119 3.458163 CGGCCCGAGTGCTTAGGA 61.458 66.667 0.00 0.00 0.00 2.94
5135 7126 1.467875 CGAGTGCTTAGGACGATTCG 58.532 55.000 4.14 4.14 0.00 3.34
5159 7150 3.369052 CGAATCTTGCACCCAGGTACTAA 60.369 47.826 0.00 0.00 36.02 2.24
5160 7151 3.914426 ATCTTGCACCCAGGTACTAAG 57.086 47.619 0.00 0.00 36.02 2.18
5186 7177 7.433425 GCTAACTCCATTGATTTGATTACAAGC 59.567 37.037 0.00 0.00 37.32 4.01
5368 7470 2.609350 CCTTTCGGCAATCCACATTTG 58.391 47.619 0.00 0.00 0.00 2.32
5369 7471 2.029110 CCTTTCGGCAATCCACATTTGT 60.029 45.455 0.00 0.00 0.00 2.83
5376 7486 4.675510 GGCAATCCACATTTGTATGTCTG 58.324 43.478 0.00 0.00 43.07 3.51
5500 7610 4.325472 CACGTACAAGGTCTCGTATTTTCC 59.675 45.833 0.00 0.00 35.13 3.13
5501 7611 4.022068 ACGTACAAGGTCTCGTATTTTCCA 60.022 41.667 0.00 0.00 34.78 3.53
5514 7624 7.282675 TCTCGTATTTTCCAAAAACACAAGGTA 59.717 33.333 0.00 0.00 0.00 3.08
5516 7626 8.414778 TCGTATTTTCCAAAAACACAAGGTATT 58.585 29.630 0.00 0.00 0.00 1.89
5542 7652 5.420725 TGATGTGGTACAGATTAGCAAGT 57.579 39.130 0.00 0.00 44.52 3.16
5561 7671 5.172934 CAAGTAATCCACTACCGCAGTAAA 58.827 41.667 0.00 0.00 36.04 2.01
5625 7735 8.958119 TCTTGTTCTGTAACATTTAACTGAGT 57.042 30.769 0.00 0.00 44.85 3.41
5683 7794 3.313012 AATTTCGTCGACATGGACTCA 57.687 42.857 17.16 0.00 34.75 3.41
5688 7799 0.924090 GTCGACATGGACTCAATCGC 59.076 55.000 11.55 0.00 36.28 4.58
5698 7810 2.125872 TCAATCGCGCGTGCCTTA 60.126 55.556 30.98 9.80 38.08 2.69
5711 7823 1.302993 GCCTTAAACTCCGGTGCCA 60.303 57.895 0.00 0.00 0.00 4.92
5756 7872 1.433064 CACACTGCGTTTGCCTTGT 59.567 52.632 0.00 0.00 41.78 3.16
5757 7873 0.179140 CACACTGCGTTTGCCTTGTT 60.179 50.000 0.00 0.00 41.78 2.83
5781 7897 5.106712 TGTTTGATCTGTCTTTATTCCGCAC 60.107 40.000 0.00 0.00 0.00 5.34
5903 8019 4.853468 TGCCCTGATGAACCATTAGTTA 57.147 40.909 0.00 0.00 39.40 2.24
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 7.498239 TGAGATCAATTCCTCATGTTCATTCTC 59.502 37.037 0.00 0.00 34.78 2.87
3 4 7.563888 TGAGATCAATTCCTCATGTTCATTC 57.436 36.000 0.00 0.00 34.78 2.67
4 5 7.778382 TGATGAGATCAATTCCTCATGTTCATT 59.222 33.333 15.34 0.00 46.64 2.57
5 6 7.228906 GTGATGAGATCAATTCCTCATGTTCAT 59.771 37.037 15.34 3.77 46.64 2.57
6 7 6.541278 GTGATGAGATCAATTCCTCATGTTCA 59.459 38.462 15.34 8.50 46.64 3.18
7 8 6.541278 TGTGATGAGATCAATTCCTCATGTTC 59.459 38.462 15.34 6.67 46.64 3.18
8 9 6.420638 TGTGATGAGATCAATTCCTCATGTT 58.579 36.000 15.34 0.00 46.64 2.71
26 27 7.665145 TCCCATGTATATATGGTTGTTGTGATG 59.335 37.037 22.73 7.47 44.98 3.07
33 38 7.090319 ACACATCCCATGTATATATGGTTGT 57.910 36.000 22.73 21.14 44.98 3.32
51 58 4.497340 CCATGCGTACCCATTTTACACATC 60.497 45.833 0.00 0.00 0.00 3.06
55 62 2.750166 CACCATGCGTACCCATTTTACA 59.250 45.455 0.00 0.00 0.00 2.41
83 95 5.040635 GTGGTATTAATCAAATTGGGCACG 58.959 41.667 0.00 0.00 0.00 5.34
89 101 8.400947 CCTCTGTCTGTGGTATTAATCAAATTG 58.599 37.037 0.00 0.00 0.00 2.32
102 114 1.043816 CTGACACCTCTGTCTGTGGT 58.956 55.000 2.72 0.00 46.31 4.16
141 153 3.470709 TGCCTCTAAGCAGATGCATTAC 58.529 45.455 0.00 0.00 44.45 1.89
173 185 3.811722 TGAACTGCTTAGTTTGCATCG 57.188 42.857 0.00 0.00 39.86 3.84
174 186 6.030228 GGTTATGAACTGCTTAGTTTGCATC 58.970 40.000 0.00 0.00 39.86 3.91
192 204 4.414852 GCATGTGCACTAGTTTGGTTATG 58.585 43.478 19.41 9.99 41.59 1.90
210 225 4.235731 TGCCTCTGAGCATGCATG 57.764 55.556 22.70 22.70 38.00 4.06
233 248 1.744320 TATGTGCCTGGGACGATCCG 61.744 60.000 13.87 0.00 37.43 4.18
234 249 0.249911 GTATGTGCCTGGGACGATCC 60.250 60.000 13.87 0.00 35.23 3.36
276 298 5.835113 TGCAATATTTAAACTCCTGCTCC 57.165 39.130 12.10 0.00 0.00 4.70
278 300 6.604795 ACTCATGCAATATTTAAACTCCTGCT 59.395 34.615 12.10 0.42 0.00 4.24
281 303 7.118723 TCCACTCATGCAATATTTAAACTCCT 58.881 34.615 0.00 0.00 0.00 3.69
330 356 0.107993 CAGATTCCTCGCTTGCTCCA 60.108 55.000 0.00 0.00 0.00 3.86
349 395 4.378459 CGTGCCTAAGAAAAATGTCAGGAC 60.378 45.833 0.00 0.00 0.00 3.85
445 496 5.321927 GGAGAAAAGTTTCCTTGGATACCA 58.678 41.667 6.63 0.00 37.92 3.25
498 644 3.347216 ACCAAGTGTCATGTCATAAGGC 58.653 45.455 0.00 0.00 0.00 4.35
625 1553 4.402528 CCGCCCCACCAATCACGA 62.403 66.667 0.00 0.00 0.00 4.35
626 1554 2.602746 ATACCGCCCCACCAATCACG 62.603 60.000 0.00 0.00 0.00 4.35
646 1604 7.104290 ACTGAACTAGCTGGGTTAAACTAATC 58.896 38.462 0.85 0.00 0.00 1.75
663 1623 2.028112 AGATGCCGCTCAAACTGAACTA 60.028 45.455 0.00 0.00 0.00 2.24
776 1739 2.351244 CGGGCCTGTCAGACAGCTA 61.351 63.158 23.46 0.00 44.63 3.32
877 1843 7.894364 AGGAGAAACTAGACTGGTATAGAAACA 59.106 37.037 9.04 0.00 0.00 2.83
915 2071 0.971386 AAAGGCACTCTGGGCAATTG 59.029 50.000 0.00 0.00 38.49 2.32
964 2120 4.008330 TCTCGTGGTGTTTTTGGTGTAAA 58.992 39.130 0.00 0.00 0.00 2.01
997 2153 1.407851 CCCCATGGCGATCTCCATATG 60.408 57.143 16.76 10.90 44.63 1.78
998 2154 0.914644 CCCCATGGCGATCTCCATAT 59.085 55.000 16.76 0.00 44.63 1.78
1072 2228 4.207165 CCTTTCCTCACTTGTTTCTCCAA 58.793 43.478 0.00 0.00 0.00 3.53
1099 2255 1.539388 CAGCTCTGTCACGAGAGACTT 59.461 52.381 8.07 0.00 41.95 3.01
1137 2293 1.071699 ACTTTTGCTACCTTGCGGAGA 59.928 47.619 0.00 0.00 35.36 3.71
1141 2297 3.092081 GCACTTTTGCTACCTTGCG 57.908 52.632 0.00 0.00 46.17 4.85
1167 2323 0.473694 TGACCCCCTCTTCAAGCTGA 60.474 55.000 0.00 0.00 0.00 4.26
1212 2368 7.647827 TGATTTCCTCCATTTGGTAGGATAAA 58.352 34.615 14.57 9.77 39.52 1.40
1215 2371 5.732331 TGATTTCCTCCATTTGGTAGGAT 57.268 39.130 14.57 5.35 39.52 3.24
1237 2393 3.888930 ACGTGGACCTTGAAAACATCAAT 59.111 39.130 0.00 0.00 46.62 2.57
1250 2406 1.553690 CCCATTCTCCACGTGGACCT 61.554 60.000 33.23 17.15 39.78 3.85
1254 2410 2.272146 CCCCCATTCTCCACGTGG 59.728 66.667 29.26 29.26 0.00 4.94
1256 2412 2.484287 CTTGCCCCCATTCTCCACGT 62.484 60.000 0.00 0.00 0.00 4.49
1264 2420 2.607442 GGTTGGCTTGCCCCCATT 60.607 61.111 9.35 0.00 31.26 3.16
1269 2425 2.919494 CGAGTTGGTTGGCTTGCCC 61.919 63.158 9.35 0.00 0.00 5.36
1278 2434 3.821421 ACTCTGTTCTTCGAGTTGGTT 57.179 42.857 0.00 0.00 37.19 3.67
1285 2441 8.338072 AGTATCTTCTTAACTCTGTTCTTCGA 57.662 34.615 0.00 0.00 0.00 3.71
1299 2455 9.712305 CTTTTGACCTTCTTGAGTATCTTCTTA 57.288 33.333 0.00 0.00 34.92 2.10
1326 2482 6.238869 GGAGATCCTTGCCATTCTTGAATAAC 60.239 42.308 0.00 0.00 0.00 1.89
1363 2519 2.159028 GGACCGCTTCTTCTAGAGCATT 60.159 50.000 3.00 0.00 0.00 3.56
1386 2542 1.071699 TCCGCCAACTTCTTAGCTTGT 59.928 47.619 0.00 0.00 0.00 3.16
1396 2552 4.626081 ACGCAGCTCCGCCAACTT 62.626 61.111 0.00 0.00 0.00 2.66
1596 2752 1.291906 GCCCAAACCACCAAATCCG 59.708 57.895 0.00 0.00 0.00 4.18
1669 2825 7.915293 TCTGAGAAACCGAAATAAAAGCATA 57.085 32.000 0.00 0.00 0.00 3.14
1717 2873 9.258826 CTTGTCAAGTCCATAGAGAATATTCTG 57.741 37.037 22.61 8.87 37.73 3.02
1746 2902 6.925610 TTGCTATGAATGTGTCCATACTTC 57.074 37.500 0.00 0.00 0.00 3.01
1754 2910 5.357878 TCCCATTCTTTGCTATGAATGTGTC 59.642 40.000 24.45 0.00 44.59 3.67
1768 2924 7.543359 TCAGATGATTTTGTTCCCATTCTTT 57.457 32.000 0.00 0.00 0.00 2.52
1818 2974 2.386661 AACACATCTACCTCTTGCCG 57.613 50.000 0.00 0.00 0.00 5.69
1852 3041 8.524870 TTAACTAGACAAAACGGTAATCTGTC 57.475 34.615 0.00 0.00 37.30 3.51
1913 3104 0.609131 ACCCTCCAAAATCTGCACCG 60.609 55.000 0.00 0.00 0.00 4.94
1919 3110 1.486726 CGCCTAGACCCTCCAAAATCT 59.513 52.381 0.00 0.00 0.00 2.40
1926 3117 3.851128 GGTGCGCCTAGACCCTCC 61.851 72.222 9.68 0.00 0.00 4.30
1943 3139 6.674066 TCTTTTACAAAAGTTGCCTAATCGG 58.326 36.000 12.80 0.00 44.37 4.18
1944 3140 8.568732 TTTCTTTTACAAAAGTTGCCTAATCG 57.431 30.769 12.80 0.00 44.37 3.34
1966 3162 8.641499 TCCAACAAACAAACACATATCTTTTC 57.359 30.769 0.00 0.00 0.00 2.29
1971 3167 7.763172 TTGTTCCAACAAACAAACACATATC 57.237 32.000 2.29 0.00 45.17 1.63
2008 3216 9.995003 TCCGGAAACTTTACAAGTAAGTAATAA 57.005 29.630 0.00 0.00 41.91 1.40
2016 3224 5.426504 TGTTGTCCGGAAACTTTACAAGTA 58.573 37.500 21.90 6.81 41.91 2.24
2031 3698 2.357637 ACCACAAAAGTCATGTTGTCCG 59.642 45.455 0.00 0.00 35.81 4.79
2038 3705 7.063308 GCCAACAATAATACCACAAAAGTCATG 59.937 37.037 0.00 0.00 0.00 3.07
2056 3724 6.035217 GCAATTTTGTCTTTTTGCCAACAAT 58.965 32.000 0.00 0.00 38.77 2.71
2060 3728 5.182760 ACTTGCAATTTTGTCTTTTTGCCAA 59.817 32.000 0.00 0.00 42.87 4.52
2061 3729 4.699257 ACTTGCAATTTTGTCTTTTTGCCA 59.301 33.333 0.00 0.00 42.87 4.92
2062 3730 5.233957 ACTTGCAATTTTGTCTTTTTGCC 57.766 34.783 0.00 0.00 42.87 4.52
2111 3779 5.479716 GGGAGTACAAAACCGATACAATG 57.520 43.478 0.00 0.00 0.00 2.82
2129 3797 4.755123 CCTTGTATAAGTAAATGGCGGGAG 59.245 45.833 0.00 0.00 31.80 4.30
2130 3798 4.710324 CCTTGTATAAGTAAATGGCGGGA 58.290 43.478 0.00 0.00 31.80 5.14
2131 3799 3.252458 GCCTTGTATAAGTAAATGGCGGG 59.748 47.826 0.00 0.00 31.06 6.13
2132 3800 3.252458 GGCCTTGTATAAGTAAATGGCGG 59.748 47.826 0.00 0.00 38.60 6.13
2133 3801 3.880490 TGGCCTTGTATAAGTAAATGGCG 59.120 43.478 3.32 0.00 38.60 5.69
2134 3802 4.887655 AGTGGCCTTGTATAAGTAAATGGC 59.112 41.667 3.32 0.00 37.54 4.40
2135 3803 7.174946 CCATAGTGGCCTTGTATAAGTAAATGG 59.825 40.741 3.32 0.00 31.80 3.16
2136 3804 7.936847 TCCATAGTGGCCTTGTATAAGTAAATG 59.063 37.037 3.32 0.00 37.47 2.32
2137 3805 8.041143 TCCATAGTGGCCTTGTATAAGTAAAT 57.959 34.615 3.32 0.00 37.47 1.40
2138 3806 7.440505 TCCATAGTGGCCTTGTATAAGTAAA 57.559 36.000 3.32 0.00 37.47 2.01
2139 3807 7.440505 TTCCATAGTGGCCTTGTATAAGTAA 57.559 36.000 3.32 0.00 37.47 2.24
2140 3808 7.626999 ATTCCATAGTGGCCTTGTATAAGTA 57.373 36.000 3.32 0.00 37.47 2.24
2141 3809 5.968676 TTCCATAGTGGCCTTGTATAAGT 57.031 39.130 3.32 0.00 37.47 2.24
2142 3810 9.601217 GTATATTCCATAGTGGCCTTGTATAAG 57.399 37.037 3.32 0.00 37.47 1.73
2143 3811 9.106977 TGTATATTCCATAGTGGCCTTGTATAA 57.893 33.333 3.32 0.00 37.47 0.98
2144 3812 8.673456 TGTATATTCCATAGTGGCCTTGTATA 57.327 34.615 3.32 0.00 37.47 1.47
2145 3813 7.568128 TGTATATTCCATAGTGGCCTTGTAT 57.432 36.000 3.32 0.00 37.47 2.29
2146 3814 7.568128 ATGTATATTCCATAGTGGCCTTGTA 57.432 36.000 3.32 0.00 37.47 2.41
2147 3815 5.904984 TGTATATTCCATAGTGGCCTTGT 57.095 39.130 3.32 0.00 37.47 3.16
2148 3816 7.765695 AAATGTATATTCCATAGTGGCCTTG 57.234 36.000 3.32 0.00 37.47 3.61
2149 3817 7.255942 GCAAAATGTATATTCCATAGTGGCCTT 60.256 37.037 3.32 0.00 37.47 4.35
2150 3818 6.209391 GCAAAATGTATATTCCATAGTGGCCT 59.791 38.462 3.32 0.00 37.47 5.19
2151 3819 6.015519 TGCAAAATGTATATTCCATAGTGGCC 60.016 38.462 0.00 0.00 37.47 5.36
2152 3820 6.980593 TGCAAAATGTATATTCCATAGTGGC 58.019 36.000 0.00 0.00 37.47 5.01
2153 3821 9.017509 AGATGCAAAATGTATATTCCATAGTGG 57.982 33.333 0.00 0.00 39.43 4.00
2163 3831 8.960591 GGCCTTGTATAGATGCAAAATGTATAT 58.039 33.333 0.00 0.00 32.12 0.86
2164 3832 7.941790 TGGCCTTGTATAGATGCAAAATGTATA 59.058 33.333 3.32 0.00 32.12 1.47
2165 3833 6.777091 TGGCCTTGTATAGATGCAAAATGTAT 59.223 34.615 3.32 0.00 32.12 2.29
2166 3834 6.039270 GTGGCCTTGTATAGATGCAAAATGTA 59.961 38.462 3.32 0.00 32.12 2.29
2167 3835 4.955450 TGGCCTTGTATAGATGCAAAATGT 59.045 37.500 3.32 0.00 32.12 2.71
2168 3836 5.284079 GTGGCCTTGTATAGATGCAAAATG 58.716 41.667 3.32 0.00 32.12 2.32
2169 3837 4.342092 GGTGGCCTTGTATAGATGCAAAAT 59.658 41.667 3.32 0.00 32.12 1.82
2170 3838 3.699038 GGTGGCCTTGTATAGATGCAAAA 59.301 43.478 3.32 0.00 32.12 2.44
2171 3839 3.287222 GGTGGCCTTGTATAGATGCAAA 58.713 45.455 3.32 0.00 32.12 3.68
2172 3840 2.240921 TGGTGGCCTTGTATAGATGCAA 59.759 45.455 3.32 0.00 0.00 4.08
2173 3841 1.843206 TGGTGGCCTTGTATAGATGCA 59.157 47.619 3.32 0.00 0.00 3.96
2174 3842 2.618709 GTTGGTGGCCTTGTATAGATGC 59.381 50.000 3.32 0.00 0.00 3.91
2175 3843 3.879295 CTGTTGGTGGCCTTGTATAGATG 59.121 47.826 3.32 0.00 0.00 2.90
2176 3844 3.523564 ACTGTTGGTGGCCTTGTATAGAT 59.476 43.478 3.32 0.00 0.00 1.98
2177 3845 2.910319 ACTGTTGGTGGCCTTGTATAGA 59.090 45.455 3.32 0.00 0.00 1.98
2178 3846 3.350219 ACTGTTGGTGGCCTTGTATAG 57.650 47.619 3.32 0.00 0.00 1.31
2179 3847 4.912317 TTACTGTTGGTGGCCTTGTATA 57.088 40.909 3.32 0.00 0.00 1.47
2180 3848 3.799432 TTACTGTTGGTGGCCTTGTAT 57.201 42.857 3.32 0.00 0.00 2.29
2181 3849 3.073209 TGATTACTGTTGGTGGCCTTGTA 59.927 43.478 3.32 0.00 0.00 2.41
2182 3850 2.158534 TGATTACTGTTGGTGGCCTTGT 60.159 45.455 3.32 0.00 0.00 3.16
2183 3851 2.513753 TGATTACTGTTGGTGGCCTTG 58.486 47.619 3.32 0.00 0.00 3.61
2184 3852 2.969821 TGATTACTGTTGGTGGCCTT 57.030 45.000 3.32 0.00 0.00 4.35
2185 3853 2.555227 CCTTGATTACTGTTGGTGGCCT 60.555 50.000 3.32 0.00 0.00 5.19
2186 3854 1.818674 CCTTGATTACTGTTGGTGGCC 59.181 52.381 0.00 0.00 0.00 5.36
2187 3855 1.202348 GCCTTGATTACTGTTGGTGGC 59.798 52.381 0.00 0.00 0.00 5.01
2188 3856 2.513753 TGCCTTGATTACTGTTGGTGG 58.486 47.619 0.00 0.00 0.00 4.61
2189 3857 4.582701 TTTGCCTTGATTACTGTTGGTG 57.417 40.909 0.00 0.00 0.00 4.17
2190 3858 5.606348 TTTTTGCCTTGATTACTGTTGGT 57.394 34.783 0.00 0.00 0.00 3.67
2191 3859 8.600449 TTAATTTTTGCCTTGATTACTGTTGG 57.400 30.769 0.00 0.00 0.00 3.77
2193 3861 9.995003 TCATTAATTTTTGCCTTGATTACTGTT 57.005 25.926 0.00 0.00 0.00 3.16
2201 3869 8.782144 GGAAAACATCATTAATTTTTGCCTTGA 58.218 29.630 1.30 0.00 32.02 3.02
2202 3870 8.566260 TGGAAAACATCATTAATTTTTGCCTTG 58.434 29.630 10.31 0.00 34.78 3.61
2203 3871 8.688747 TGGAAAACATCATTAATTTTTGCCTT 57.311 26.923 10.31 0.00 34.78 4.35
2204 3872 8.567104 GTTGGAAAACATCATTAATTTTTGCCT 58.433 29.630 10.31 0.00 34.78 4.75
2205 3873 8.567104 AGTTGGAAAACATCATTAATTTTTGCC 58.433 29.630 10.31 5.78 34.42 4.52
2206 3874 9.949174 AAGTTGGAAAACATCATTAATTTTTGC 57.051 25.926 7.33 7.33 31.91 3.68
2219 3887 9.040939 GCAAGTATTAAACAAGTTGGAAAACAT 57.959 29.630 7.96 0.00 0.00 2.71
2220 3888 8.035394 TGCAAGTATTAAACAAGTTGGAAAACA 58.965 29.630 7.96 0.00 0.00 2.83
2221 3889 8.413899 TGCAAGTATTAAACAAGTTGGAAAAC 57.586 30.769 7.96 0.00 0.00 2.43
2222 3890 9.039870 CATGCAAGTATTAAACAAGTTGGAAAA 57.960 29.630 7.96 0.00 31.39 2.29
2223 3891 7.170658 GCATGCAAGTATTAAACAAGTTGGAAA 59.829 33.333 14.21 0.00 31.39 3.13
2224 3892 6.644592 GCATGCAAGTATTAAACAAGTTGGAA 59.355 34.615 14.21 0.00 31.39 3.53
2225 3893 6.155827 GCATGCAAGTATTAAACAAGTTGGA 58.844 36.000 14.21 3.94 32.03 3.53
2226 3894 5.925397 TGCATGCAAGTATTAAACAAGTTGG 59.075 36.000 20.30 0.00 0.00 3.77
2227 3895 7.116662 ACATGCATGCAAGTATTAAACAAGTTG 59.883 33.333 25.90 14.84 0.00 3.16
2228 3896 7.153985 ACATGCATGCAAGTATTAAACAAGTT 58.846 30.769 25.90 0.00 0.00 2.66
2229 3897 6.690530 ACATGCATGCAAGTATTAAACAAGT 58.309 32.000 25.90 0.43 0.00 3.16
2230 3898 7.970061 ACTACATGCATGCAAGTATTAAACAAG 59.030 33.333 29.78 21.31 31.16 3.16
2231 3899 7.825681 ACTACATGCATGCAAGTATTAAACAA 58.174 30.769 29.78 12.28 31.16 2.83
2232 3900 7.120432 TGACTACATGCATGCAAGTATTAAACA 59.880 33.333 29.78 21.68 31.16 2.83
2233 3901 7.471721 TGACTACATGCATGCAAGTATTAAAC 58.528 34.615 29.78 19.99 31.16 2.01
2234 3902 7.622893 TGACTACATGCATGCAAGTATTAAA 57.377 32.000 29.78 16.50 31.16 1.52
2235 3903 7.806409 ATGACTACATGCATGCAAGTATTAA 57.194 32.000 29.78 20.65 35.21 1.40
2236 3904 8.900983 TTATGACTACATGCATGCAAGTATTA 57.099 30.769 29.78 20.56 37.87 0.98
2237 3905 7.806409 TTATGACTACATGCATGCAAGTATT 57.194 32.000 29.78 25.52 37.87 1.89
2238 3906 7.662669 TCATTATGACTACATGCATGCAAGTAT 59.337 33.333 29.78 20.73 37.87 2.12
2239 3907 6.991531 TCATTATGACTACATGCATGCAAGTA 59.008 34.615 28.33 28.33 37.87 2.24
2240 3908 5.824097 TCATTATGACTACATGCATGCAAGT 59.176 36.000 29.11 29.11 37.87 3.16
2241 3909 6.140786 GTCATTATGACTACATGCATGCAAG 58.859 40.000 26.68 23.45 43.73 4.01
2242 3910 6.063640 GTCATTATGACTACATGCATGCAA 57.936 37.500 26.68 13.91 43.73 4.08
2243 3911 5.678132 GTCATTATGACTACATGCATGCA 57.322 39.130 26.53 25.04 43.73 3.96
2256 3924 7.363880 GGAGGAAGTAGTTGAGTGTCATTATGA 60.364 40.741 0.00 0.00 0.00 2.15
2257 3925 6.758886 GGAGGAAGTAGTTGAGTGTCATTATG 59.241 42.308 0.00 0.00 0.00 1.90
2258 3926 6.440647 TGGAGGAAGTAGTTGAGTGTCATTAT 59.559 38.462 0.00 0.00 0.00 1.28
2259 3927 5.778241 TGGAGGAAGTAGTTGAGTGTCATTA 59.222 40.000 0.00 0.00 0.00 1.90
2260 3928 4.593206 TGGAGGAAGTAGTTGAGTGTCATT 59.407 41.667 0.00 0.00 0.00 2.57
2261 3929 4.160329 TGGAGGAAGTAGTTGAGTGTCAT 58.840 43.478 0.00 0.00 0.00 3.06
2262 3930 3.572642 TGGAGGAAGTAGTTGAGTGTCA 58.427 45.455 0.00 0.00 0.00 3.58
2263 3931 4.810191 ATGGAGGAAGTAGTTGAGTGTC 57.190 45.455 0.00 0.00 0.00 3.67
2264 3932 4.593206 TGAATGGAGGAAGTAGTTGAGTGT 59.407 41.667 0.00 0.00 0.00 3.55
2265 3933 5.152623 TGAATGGAGGAAGTAGTTGAGTG 57.847 43.478 0.00 0.00 0.00 3.51
2266 3934 5.825593 TTGAATGGAGGAAGTAGTTGAGT 57.174 39.130 0.00 0.00 0.00 3.41
2267 3935 7.693969 AAATTGAATGGAGGAAGTAGTTGAG 57.306 36.000 0.00 0.00 0.00 3.02
2268 3936 7.944554 AGAAAATTGAATGGAGGAAGTAGTTGA 59.055 33.333 0.00 0.00 0.00 3.18
2269 3937 8.115490 AGAAAATTGAATGGAGGAAGTAGTTG 57.885 34.615 0.00 0.00 0.00 3.16
2270 3938 8.579863 CAAGAAAATTGAATGGAGGAAGTAGTT 58.420 33.333 0.00 0.00 0.00 2.24
2271 3939 7.944554 TCAAGAAAATTGAATGGAGGAAGTAGT 59.055 33.333 0.00 0.00 0.00 2.73
2272 3940 8.340618 TCAAGAAAATTGAATGGAGGAAGTAG 57.659 34.615 0.00 0.00 0.00 2.57
2273 3941 8.704849 TTCAAGAAAATTGAATGGAGGAAGTA 57.295 30.769 0.00 0.00 33.90 2.24
2274 3942 7.601705 TTCAAGAAAATTGAATGGAGGAAGT 57.398 32.000 0.00 0.00 33.90 3.01
2283 3951 5.406175 CCACGTGCATTCAAGAAAATTGAAT 59.594 36.000 10.91 9.45 46.59 2.57
2284 3952 4.744137 CCACGTGCATTCAAGAAAATTGAA 59.256 37.500 10.91 5.58 41.91 2.69
2285 3953 4.202101 ACCACGTGCATTCAAGAAAATTGA 60.202 37.500 10.91 0.00 0.00 2.57
2286 3954 4.050553 ACCACGTGCATTCAAGAAAATTG 58.949 39.130 10.91 0.00 0.00 2.32
2287 3955 4.050553 CACCACGTGCATTCAAGAAAATT 58.949 39.130 10.91 0.00 0.00 1.82
2288 3956 3.068024 ACACCACGTGCATTCAAGAAAAT 59.932 39.130 10.91 0.00 36.98 1.82
2289 3957 2.425312 ACACCACGTGCATTCAAGAAAA 59.575 40.909 10.91 0.00 36.98 2.29
2290 3958 2.020720 ACACCACGTGCATTCAAGAAA 58.979 42.857 10.91 0.00 36.98 2.52
2291 3959 1.674359 ACACCACGTGCATTCAAGAA 58.326 45.000 10.91 0.00 36.98 2.52
2292 3960 2.535012 TACACCACGTGCATTCAAGA 57.465 45.000 10.91 0.00 36.98 3.02
2293 3961 3.829886 AATACACCACGTGCATTCAAG 57.170 42.857 10.91 0.00 36.98 3.02
2294 3962 5.690997 TTTAATACACCACGTGCATTCAA 57.309 34.783 10.91 2.08 36.98 2.69
2295 3963 5.412904 TCATTTAATACACCACGTGCATTCA 59.587 36.000 10.91 0.00 36.98 2.57
2296 3964 5.874831 TCATTTAATACACCACGTGCATTC 58.125 37.500 10.91 0.00 36.98 2.67
2297 3965 5.888691 TCATTTAATACACCACGTGCATT 57.111 34.783 10.91 8.82 36.98 3.56
2298 3966 5.008613 GGATCATTTAATACACCACGTGCAT 59.991 40.000 10.91 0.00 36.98 3.96
2299 3967 4.334203 GGATCATTTAATACACCACGTGCA 59.666 41.667 10.91 0.00 36.98 4.57
2300 3968 4.261031 GGGATCATTTAATACACCACGTGC 60.261 45.833 10.91 0.00 36.98 5.34
2301 3969 4.878971 TGGGATCATTTAATACACCACGTG 59.121 41.667 9.08 9.08 39.75 4.49
2302 3970 5.105567 TGGGATCATTTAATACACCACGT 57.894 39.130 0.00 0.00 0.00 4.49
2303 3971 5.123227 ACTGGGATCATTTAATACACCACG 58.877 41.667 0.00 0.00 0.00 4.94
2304 3972 8.403236 GTTTACTGGGATCATTTAATACACCAC 58.597 37.037 0.00 0.00 0.00 4.16
2305 3973 8.110271 TGTTTACTGGGATCATTTAATACACCA 58.890 33.333 0.00 0.00 0.00 4.17
2306 3974 8.514330 TGTTTACTGGGATCATTTAATACACC 57.486 34.615 0.00 0.00 0.00 4.16
2308 3976 9.967451 TCTTGTTTACTGGGATCATTTAATACA 57.033 29.630 0.00 0.00 0.00 2.29
2312 3980 9.581289 TCTTTCTTGTTTACTGGGATCATTTAA 57.419 29.630 0.00 0.00 0.00 1.52
2313 3981 9.581289 TTCTTTCTTGTTTACTGGGATCATTTA 57.419 29.630 0.00 0.00 0.00 1.40
2314 3982 8.477419 TTCTTTCTTGTTTACTGGGATCATTT 57.523 30.769 0.00 0.00 0.00 2.32
2315 3983 8.477419 TTTCTTTCTTGTTTACTGGGATCATT 57.523 30.769 0.00 0.00 0.00 2.57
2316 3984 7.944554 TCTTTCTTTCTTGTTTACTGGGATCAT 59.055 33.333 0.00 0.00 0.00 2.45
2317 3985 7.287061 TCTTTCTTTCTTGTTTACTGGGATCA 58.713 34.615 0.00 0.00 0.00 2.92
2318 3986 7.745620 TCTTTCTTTCTTGTTTACTGGGATC 57.254 36.000 0.00 0.00 0.00 3.36
2319 3987 7.177392 CCATCTTTCTTTCTTGTTTACTGGGAT 59.823 37.037 0.00 0.00 0.00 3.85
2320 3988 6.490040 CCATCTTTCTTTCTTGTTTACTGGGA 59.510 38.462 0.00 0.00 0.00 4.37
2321 3989 6.490040 TCCATCTTTCTTTCTTGTTTACTGGG 59.510 38.462 0.00 0.00 0.00 4.45
2322 3990 7.510549 TCCATCTTTCTTTCTTGTTTACTGG 57.489 36.000 0.00 0.00 0.00 4.00
2323 3991 9.403110 CATTCCATCTTTCTTTCTTGTTTACTG 57.597 33.333 0.00 0.00 0.00 2.74
2324 3992 8.084684 GCATTCCATCTTTCTTTCTTGTTTACT 58.915 33.333 0.00 0.00 0.00 2.24
2325 3993 7.867403 TGCATTCCATCTTTCTTTCTTGTTTAC 59.133 33.333 0.00 0.00 0.00 2.01
2326 3994 7.950512 TGCATTCCATCTTTCTTTCTTGTTTA 58.049 30.769 0.00 0.00 0.00 2.01
2327 3995 6.819284 TGCATTCCATCTTTCTTTCTTGTTT 58.181 32.000 0.00 0.00 0.00 2.83
2328 3996 6.409524 TGCATTCCATCTTTCTTTCTTGTT 57.590 33.333 0.00 0.00 0.00 2.83
2329 3997 6.409524 TTGCATTCCATCTTTCTTTCTTGT 57.590 33.333 0.00 0.00 0.00 3.16
2330 3998 7.225145 TGTTTTGCATTCCATCTTTCTTTCTTG 59.775 33.333 0.00 0.00 0.00 3.02
2331 3999 7.274447 TGTTTTGCATTCCATCTTTCTTTCTT 58.726 30.769 0.00 0.00 0.00 2.52
2332 4000 6.819284 TGTTTTGCATTCCATCTTTCTTTCT 58.181 32.000 0.00 0.00 0.00 2.52
2333 4001 7.172019 ACATGTTTTGCATTCCATCTTTCTTTC 59.828 33.333 0.00 0.00 35.19 2.62
2334 4002 6.993902 ACATGTTTTGCATTCCATCTTTCTTT 59.006 30.769 0.00 0.00 35.19 2.52
2335 4003 6.527423 ACATGTTTTGCATTCCATCTTTCTT 58.473 32.000 0.00 0.00 35.19 2.52
2336 4004 6.105397 ACATGTTTTGCATTCCATCTTTCT 57.895 33.333 0.00 0.00 35.19 2.52
2337 4005 8.483307 AATACATGTTTTGCATTCCATCTTTC 57.517 30.769 2.30 0.00 35.19 2.62
2338 4006 9.941325 TTAATACATGTTTTGCATTCCATCTTT 57.059 25.926 2.30 0.00 35.19 2.52
2339 4007 9.941325 TTTAATACATGTTTTGCATTCCATCTT 57.059 25.926 2.30 0.00 35.19 2.40
2366 4034 9.802039 ACTCAAATTACAGATACCAAGGTAAAA 57.198 29.630 2.62 0.00 33.99 1.52
2367 4035 9.802039 AACTCAAATTACAGATACCAAGGTAAA 57.198 29.630 2.62 0.00 33.99 2.01
2368 4036 9.802039 AAACTCAAATTACAGATACCAAGGTAA 57.198 29.630 2.62 0.00 33.99 2.85
2369 4037 9.226606 CAAACTCAAATTACAGATACCAAGGTA 57.773 33.333 0.73 0.73 34.87 3.08
2370 4038 7.724061 ACAAACTCAAATTACAGATACCAAGGT 59.276 33.333 0.00 0.00 0.00 3.50
2371 4039 8.023128 CACAAACTCAAATTACAGATACCAAGG 58.977 37.037 0.00 0.00 0.00 3.61
2372 4040 8.023128 CCACAAACTCAAATTACAGATACCAAG 58.977 37.037 0.00 0.00 0.00 3.61
2373 4041 7.523052 GCCACAAACTCAAATTACAGATACCAA 60.523 37.037 0.00 0.00 0.00 3.67
2374 4042 6.072175 GCCACAAACTCAAATTACAGATACCA 60.072 38.462 0.00 0.00 0.00 3.25
2375 4043 6.322491 GCCACAAACTCAAATTACAGATACC 58.678 40.000 0.00 0.00 0.00 2.73
2376 4044 6.151144 AGGCCACAAACTCAAATTACAGATAC 59.849 38.462 5.01 0.00 0.00 2.24
2377 4045 6.245408 AGGCCACAAACTCAAATTACAGATA 58.755 36.000 5.01 0.00 0.00 1.98
2378 4046 5.079643 AGGCCACAAACTCAAATTACAGAT 58.920 37.500 5.01 0.00 0.00 2.90
2379 4047 4.469657 AGGCCACAAACTCAAATTACAGA 58.530 39.130 5.01 0.00 0.00 3.41
2380 4048 4.853924 AGGCCACAAACTCAAATTACAG 57.146 40.909 5.01 0.00 0.00 2.74
2381 4049 4.404073 ACAAGGCCACAAACTCAAATTACA 59.596 37.500 5.01 0.00 0.00 2.41
2382 4050 4.944048 ACAAGGCCACAAACTCAAATTAC 58.056 39.130 5.01 0.00 0.00 1.89
2383 4051 6.909550 ATACAAGGCCACAAACTCAAATTA 57.090 33.333 5.01 0.00 0.00 1.40
2384 4052 5.806654 ATACAAGGCCACAAACTCAAATT 57.193 34.783 5.01 0.00 0.00 1.82
2385 4053 8.588290 TTATATACAAGGCCACAAACTCAAAT 57.412 30.769 5.01 0.00 0.00 2.32
2386 4054 8.410673 TTTATATACAAGGCCACAAACTCAAA 57.589 30.769 5.01 0.00 0.00 2.69
2387 4055 8.410673 TTTTATATACAAGGCCACAAACTCAA 57.589 30.769 5.01 0.00 0.00 3.02
2388 4056 8.410673 TTTTTATATACAAGGCCACAAACTCA 57.589 30.769 5.01 0.00 0.00 3.41
2389 4057 9.301153 CATTTTTATATACAAGGCCACAAACTC 57.699 33.333 5.01 0.00 0.00 3.01
2390 4058 8.257306 CCATTTTTATATACAAGGCCACAAACT 58.743 33.333 5.01 0.00 0.00 2.66
2391 4059 8.254508 TCCATTTTTATATACAAGGCCACAAAC 58.745 33.333 5.01 0.00 0.00 2.93
2392 4060 8.367660 TCCATTTTTATATACAAGGCCACAAA 57.632 30.769 5.01 0.00 0.00 2.83
2393 4061 7.069331 CCTCCATTTTTATATACAAGGCCACAA 59.931 37.037 5.01 0.00 0.00 3.33
2394 4062 6.549364 CCTCCATTTTTATATACAAGGCCACA 59.451 38.462 5.01 0.00 0.00 4.17
2395 4063 6.015434 CCCTCCATTTTTATATACAAGGCCAC 60.015 42.308 5.01 0.00 0.00 5.01
2396 4064 6.074648 CCCTCCATTTTTATATACAAGGCCA 58.925 40.000 5.01 0.00 0.00 5.36
2397 4065 6.311735 TCCCTCCATTTTTATATACAAGGCC 58.688 40.000 0.00 0.00 0.00 5.19
2398 4066 7.004691 ACTCCCTCCATTTTTATATACAAGGC 58.995 38.462 0.00 0.00 0.00 4.35
2446 4114 9.360093 TGTAAAATTTCGTGACAAAATGACTTT 57.640 25.926 0.00 0.00 0.00 2.66
2578 4249 7.448469 GCATATAAGAAATACACCTTGGGACAT 59.552 37.037 0.00 0.00 39.30 3.06
2679 4350 2.189594 TGCACTCCCTGATTGTTGAG 57.810 50.000 0.00 0.00 0.00 3.02
2834 4565 9.950680 AATTTATAACTCGACCAAATTGCATAG 57.049 29.630 0.00 0.00 29.96 2.23
2963 4701 7.335627 TCATCAATTACGATGAGGTACCTTTT 58.664 34.615 17.53 6.56 45.31 2.27
3074 4812 4.752101 ACATGCTTCAGAGACACTAACAAC 59.248 41.667 0.00 0.00 0.00 3.32
3142 4880 9.952188 TTATAGAAGAGTGTTCTTGATACATCG 57.048 33.333 7.97 0.00 43.63 3.84
3580 5319 5.392767 TCGGCTGGATCATACTTCTATTC 57.607 43.478 0.00 0.00 0.00 1.75
3601 5340 6.942532 TTTCCTACAACATCAATGCCTATC 57.057 37.500 0.00 0.00 0.00 2.08
3618 5357 3.244630 ACGGCAACCTTGTACATTTCCTA 60.245 43.478 0.00 0.00 0.00 2.94
3714 5453 8.432805 TCTCTGAGTTAGGAATTTTTCTTCTGT 58.567 33.333 4.32 0.00 0.00 3.41
3727 5466 4.399618 CGAACCTTGATCTCTGAGTTAGGA 59.600 45.833 17.40 0.00 0.00 2.94
3990 5729 1.918957 ACTGCAGCTTCCCTATTTCCT 59.081 47.619 15.27 0.00 0.00 3.36
4020 5759 9.191479 CTATCTTAGAACCTCTTAAGTCCAAGA 57.809 37.037 1.63 3.63 33.55 3.02
4101 5840 5.354513 CCAGATGGCAGCTTCATATCATAAG 59.645 44.000 0.62 0.00 0.00 1.73
4419 6158 1.392589 AATCCATGACGGCAATGTCC 58.607 50.000 0.00 0.00 38.11 4.02
4539 6278 6.312426 CACAGAACAATCCAGTATCTGAAGAC 59.688 42.308 7.98 0.00 39.85 3.01
4666 6438 1.813513 CTGCTCCTCGTGGAAACATT 58.186 50.000 7.75 0.00 46.14 2.71
4794 6641 3.553302 GCTAGCTCCCTCCTCGATAAAAC 60.553 52.174 7.70 0.00 0.00 2.43
4939 6828 6.226052 AGACAATGTACATATGATGCGTCAT 58.774 36.000 24.19 24.19 46.54 3.06
4940 6829 5.600696 AGACAATGTACATATGATGCGTCA 58.399 37.500 11.83 11.83 39.04 4.35
4941 6830 5.119279 GGAGACAATGTACATATGATGCGTC 59.881 44.000 9.21 0.00 0.00 5.19
4942 6831 4.991056 GGAGACAATGTACATATGATGCGT 59.009 41.667 9.21 0.00 0.00 5.24
4944 6833 5.230182 TCGGAGACAATGTACATATGATGC 58.770 41.667 9.21 8.44 0.00 3.91
4951 6848 5.084818 TGAACATCGGAGACAATGTACAT 57.915 39.130 1.41 1.41 42.51 2.29
4963 6866 3.942829 AGAAAGAGCAATGAACATCGGA 58.057 40.909 0.00 0.00 0.00 4.55
4965 6868 5.455392 ACAAAGAAAGAGCAATGAACATCG 58.545 37.500 0.00 0.00 0.00 3.84
5008 6952 3.138798 GGTACCTCGCGAGCCTCA 61.139 66.667 30.49 11.54 0.00 3.86
5021 6982 2.484742 ACAAAATCGTGGAGGGGTAC 57.515 50.000 0.00 0.00 0.00 3.34
5066 7057 5.768164 GGAAGAGGTGAGGAATAAAACACAA 59.232 40.000 0.00 0.00 35.33 3.33
5067 7058 5.313712 GGAAGAGGTGAGGAATAAAACACA 58.686 41.667 0.00 0.00 35.33 3.72
5082 7073 4.266714 TGAAACTGAAAAACGGAAGAGGT 58.733 39.130 0.00 0.00 0.00 3.85
5135 7126 0.321653 ACCTGGGTGCAAGATTCGAC 60.322 55.000 0.00 0.00 0.00 4.20
5159 7150 8.579850 TTGTAATCAAATCAATGGAGTTAGCT 57.420 30.769 0.00 0.00 28.78 3.32
5160 7151 7.433425 GCTTGTAATCAAATCAATGGAGTTAGC 59.567 37.037 0.00 0.00 32.87 3.09
5186 7177 7.274250 GCAGCAGAAATTAAGAATACTTTGGTG 59.726 37.037 0.00 0.00 37.64 4.17
5302 7403 7.278868 GGTTCATCCAAGTAGAGAAACACATAG 59.721 40.741 0.00 0.00 35.97 2.23
5349 7451 3.302365 ACAAATGTGGATTGCCGAAAG 57.698 42.857 0.00 0.00 36.79 2.62
5355 7457 5.124457 AGACAGACATACAAATGTGGATTGC 59.876 40.000 0.00 0.00 46.49 3.56
5365 7467 9.778741 ACTTCAGAATTTAGACAGACATACAAA 57.221 29.630 0.00 0.00 0.00 2.83
5366 7468 9.208022 CACTTCAGAATTTAGACAGACATACAA 57.792 33.333 0.00 0.00 0.00 2.41
5367 7469 7.331934 GCACTTCAGAATTTAGACAGACATACA 59.668 37.037 0.00 0.00 0.00 2.29
5368 7470 7.201565 GGCACTTCAGAATTTAGACAGACATAC 60.202 40.741 0.00 0.00 0.00 2.39
5369 7471 6.818644 GGCACTTCAGAATTTAGACAGACATA 59.181 38.462 0.00 0.00 0.00 2.29
5376 7486 5.470098 TCTGTTGGCACTTCAGAATTTAGAC 59.530 40.000 11.89 0.00 36.36 2.59
5464 7574 4.439563 CCTTGTACGTGGCAAGAAAAAGTT 60.440 41.667 25.96 0.00 44.29 2.66
5516 7626 8.870116 ACTTGCTAATCTGTACCACATCATATA 58.130 33.333 0.00 0.00 0.00 0.86
5542 7652 7.439955 CACATATTTTACTGCGGTAGTGGATTA 59.560 37.037 9.11 0.00 40.65 1.75
5561 7671 5.683876 ACTGCAGAGAAGGTACACATATT 57.316 39.130 23.35 0.00 0.00 1.28
5625 7735 0.883153 GCAGTGCCACATGTGAATGA 59.117 50.000 27.46 4.76 0.00 2.57
5683 7794 1.133869 GTTTAAGGCACGCGCGATT 59.866 52.632 39.36 24.96 39.92 3.34
5688 7799 2.736682 CCGGAGTTTAAGGCACGCG 61.737 63.158 3.53 3.53 0.00 6.01
5698 7810 1.995376 AAGAAATGGCACCGGAGTTT 58.005 45.000 9.46 0.00 0.00 2.66
5711 7823 7.936584 TCGACTGTATTGGTTGAAAAAGAAAT 58.063 30.769 0.00 0.00 0.00 2.17
5756 7872 5.471797 TGCGGAATAAAGACAGATCAAACAA 59.528 36.000 0.00 0.00 0.00 2.83
5757 7873 5.000591 TGCGGAATAAAGACAGATCAAACA 58.999 37.500 0.00 0.00 0.00 2.83
5781 7897 3.181477 ACAGAATGAGAGCTTCATCTCGG 60.181 47.826 10.52 11.90 45.82 4.63
5880 7996 3.624777 ACTAATGGTTCATCAGGGCAAG 58.375 45.455 0.00 0.00 0.00 4.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.