Multiple sequence alignment - TraesCS3A01G478500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G478500 chr3A 100.000 3339 0 0 1 3339 710770007 710773345 0.000000e+00 6167
1 TraesCS3A01G478500 chr3A 98.413 504 8 0 1 504 9055720 9056223 0.000000e+00 887
2 TraesCS3A01G478500 chr3A 80.508 1180 141 57 1074 2217 710794409 710795535 0.000000e+00 822
3 TraesCS3A01G478500 chr3A 79.871 775 125 20 1404 2158 709193273 709192510 3.790000e-149 538
4 TraesCS3A01G478500 chr3A 78.382 754 114 33 1074 1802 710782705 710783434 8.500000e-121 444
5 TraesCS3A01G478500 chr3A 90.196 102 10 0 701 802 710793848 710793949 2.090000e-27 134
6 TraesCS3A01G478500 chr3D 90.508 2107 133 23 504 2574 574859460 574857385 0.000000e+00 2721
7 TraesCS3A01G478500 chr3D 86.154 325 31 6 2577 2887 574857130 574856806 4.130000e-89 339
8 TraesCS3A01G478500 chr3D 92.222 90 4 1 2881 2967 574849574 574849485 1.260000e-24 124
9 TraesCS3A01G478500 chr3D 83.962 106 14 1 976 1081 574281054 574280952 7.620000e-17 99
10 TraesCS3A01G478500 chr3B 91.142 1558 105 20 1289 2831 765059840 765061379 0.000000e+00 2082
11 TraesCS3A01G478500 chr3B 90.254 708 26 10 550 1229 765059141 765059833 0.000000e+00 885
12 TraesCS3A01G478500 chr3B 97.485 517 11 2 1 517 766127621 766128135 0.000000e+00 881
13 TraesCS3A01G478500 chr3B 83.059 791 101 20 1390 2170 765307807 765308574 0.000000e+00 688
14 TraesCS3A01G478500 chr3B 79.417 1030 153 31 1390 2393 765108674 765109670 0.000000e+00 673
15 TraesCS3A01G478500 chr3B 87.000 100 13 0 701 800 765306927 765307026 2.720000e-21 113
16 TraesCS3A01G478500 chr4A 98.249 514 8 1 1 513 701553093 701553606 0.000000e+00 898
17 TraesCS3A01G478500 chr1A 98.614 505 7 0 1 505 4558500 4557996 0.000000e+00 894
18 TraesCS3A01G478500 chr6A 98.416 505 8 0 1 505 74105441 74105945 0.000000e+00 889
19 TraesCS3A01G478500 chr5A 98.608 503 6 1 1 503 1840225 1839724 0.000000e+00 889
20 TraesCS3A01G478500 chrUn 98.413 504 8 0 1 504 194093431 194092928 0.000000e+00 887
21 TraesCS3A01G478500 chrUn 79.194 769 139 17 1404 2156 41225374 41226137 6.390000e-142 514
22 TraesCS3A01G478500 chr6B 98.413 504 8 0 1 504 689057636 689058139 0.000000e+00 887
23 TraesCS3A01G478500 chr6B 98.413 504 8 0 1 504 716423531 716424034 0.000000e+00 887
24 TraesCS3A01G478500 chr2A 89.524 105 11 0 1076 1180 4047496 4047392 2.090000e-27 134


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G478500 chr3A 710770007 710773345 3338 False 6167.0 6167 100.0000 1 3339 1 chr3A.!!$F2 3338
1 TraesCS3A01G478500 chr3A 9055720 9056223 503 False 887.0 887 98.4130 1 504 1 chr3A.!!$F1 503
2 TraesCS3A01G478500 chr3A 709192510 709193273 763 True 538.0 538 79.8710 1404 2158 1 chr3A.!!$R1 754
3 TraesCS3A01G478500 chr3A 710793848 710795535 1687 False 478.0 822 85.3520 701 2217 2 chr3A.!!$F4 1516
4 TraesCS3A01G478500 chr3A 710782705 710783434 729 False 444.0 444 78.3820 1074 1802 1 chr3A.!!$F3 728
5 TraesCS3A01G478500 chr3D 574856806 574859460 2654 True 1530.0 2721 88.3310 504 2887 2 chr3D.!!$R3 2383
6 TraesCS3A01G478500 chr3B 765059141 765061379 2238 False 1483.5 2082 90.6980 550 2831 2 chr3B.!!$F3 2281
7 TraesCS3A01G478500 chr3B 766127621 766128135 514 False 881.0 881 97.4850 1 517 1 chr3B.!!$F2 516
8 TraesCS3A01G478500 chr3B 765108674 765109670 996 False 673.0 673 79.4170 1390 2393 1 chr3B.!!$F1 1003
9 TraesCS3A01G478500 chr3B 765306927 765308574 1647 False 400.5 688 85.0295 701 2170 2 chr3B.!!$F4 1469
10 TraesCS3A01G478500 chr4A 701553093 701553606 513 False 898.0 898 98.2490 1 513 1 chr4A.!!$F1 512
11 TraesCS3A01G478500 chr1A 4557996 4558500 504 True 894.0 894 98.6140 1 505 1 chr1A.!!$R1 504
12 TraesCS3A01G478500 chr6A 74105441 74105945 504 False 889.0 889 98.4160 1 505 1 chr6A.!!$F1 504
13 TraesCS3A01G478500 chr5A 1839724 1840225 501 True 889.0 889 98.6080 1 503 1 chr5A.!!$R1 502
14 TraesCS3A01G478500 chrUn 194092928 194093431 503 True 887.0 887 98.4130 1 504 1 chrUn.!!$R1 503
15 TraesCS3A01G478500 chrUn 41225374 41226137 763 False 514.0 514 79.1940 1404 2156 1 chrUn.!!$F1 752
16 TraesCS3A01G478500 chr6B 689057636 689058139 503 False 887.0 887 98.4130 1 504 1 chr6B.!!$F1 503
17 TraesCS3A01G478500 chr6B 716423531 716424034 503 False 887.0 887 98.4130 1 504 1 chr6B.!!$F2 503

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
675 681 1.220749 GGCCACTGGATAGTCGCAA 59.779 57.895 0.0 0.0 42.04 4.85 F
1192 1440 0.040157 CCATGTCACCTGCAACAACG 60.040 55.000 0.0 0.0 0.00 4.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1832 2165 0.030638 CACCTGCAAACTTGTTCCCG 59.969 55.0 0.00 0.0 0.0 5.14 R
2651 3270 0.173935 AATGGCCATCACATGCAACG 59.826 50.0 21.08 0.0 0.0 4.10 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
216 218 5.986135 CGAGGACGATGAATTTATTCCTCTT 59.014 40.000 20.45 0.56 44.77 2.85
228 230 4.351054 CCTCTTGCCGGGCAGGTT 62.351 66.667 27.59 0.00 40.61 3.50
347 349 8.669243 GTGATCGGTTCAAGAAAAGATATTTCT 58.331 33.333 0.00 0.00 40.20 2.52
448 450 8.768955 GCTAATAAAAATCAGACGTGATCAGAT 58.231 33.333 0.00 0.00 43.04 2.90
511 513 5.003804 ACCGTAAAACAGCTCATGAAGAAT 58.996 37.500 0.00 0.00 0.00 2.40
512 514 6.092122 CACCGTAAAACAGCTCATGAAGAATA 59.908 38.462 0.00 0.00 0.00 1.75
524 526 6.997239 TCATGAAGAATATATGAGCCATGC 57.003 37.500 0.00 0.00 32.58 4.06
527 529 3.272574 AGAATATATGAGCCATGCCCG 57.727 47.619 0.00 0.00 0.00 6.13
675 681 1.220749 GGCCACTGGATAGTCGCAA 59.779 57.895 0.00 0.00 42.04 4.85
795 812 2.621338 CATGGTGAACGTACTCTGCAT 58.379 47.619 0.00 0.00 0.00 3.96
861 882 4.441087 GCTGAACTTTCGTTGGTCAAAATC 59.559 41.667 0.00 0.00 32.39 2.17
866 887 4.827284 ACTTTCGTTGGTCAAAATCAGGAT 59.173 37.500 0.00 0.00 0.00 3.24
936 1040 2.295909 GGGACTCCGATCTGATTCTGAG 59.704 54.545 4.84 9.22 34.31 3.35
1103 1351 1.137872 CATCCTCTACTCGCAAAGGCT 59.862 52.381 0.00 0.00 38.10 4.58
1192 1440 0.040157 CCATGTCACCTGCAACAACG 60.040 55.000 0.00 0.00 0.00 4.10
1193 1441 0.662619 CATGTCACCTGCAACAACGT 59.337 50.000 0.00 0.00 0.00 3.99
1194 1442 0.944386 ATGTCACCTGCAACAACGTC 59.056 50.000 0.00 0.00 0.00 4.34
1195 1443 0.391793 TGTCACCTGCAACAACGTCA 60.392 50.000 0.00 0.00 0.00 4.35
1196 1444 0.730265 GTCACCTGCAACAACGTCAA 59.270 50.000 0.00 0.00 0.00 3.18
1197 1445 0.730265 TCACCTGCAACAACGTCAAC 59.270 50.000 0.00 0.00 0.00 3.18
1198 1446 0.449786 CACCTGCAACAACGTCAACA 59.550 50.000 0.00 0.00 0.00 3.33
1199 1447 1.135546 CACCTGCAACAACGTCAACAA 60.136 47.619 0.00 0.00 0.00 2.83
1237 1485 2.197577 GAGTGTATGCCGCTTCTCTTC 58.802 52.381 0.00 0.00 32.88 2.87
1248 1496 2.031870 GCTTCTCTTCTCTCCTCCCTC 58.968 57.143 0.00 0.00 0.00 4.30
1252 1500 0.633921 TCTTCTCTCCTCCCTCCCTG 59.366 60.000 0.00 0.00 0.00 4.45
1257 1508 1.457455 CTCCTCCCTCCCTGCTCTC 60.457 68.421 0.00 0.00 0.00 3.20
1286 1545 7.255277 GGTCCAAATTAGTTCATGATAGGAAGC 60.255 40.741 0.00 0.00 0.00 3.86
1301 1591 4.464069 AGGAAGCTACTACTCTGCTTTG 57.536 45.455 0.00 0.00 45.56 2.77
1761 2090 2.103042 GCAGCGCTTTCGGATGACT 61.103 57.895 7.50 0.00 35.95 3.41
1813 2146 4.081752 TGCTGAAAACAATCTGTTGGTGTT 60.082 37.500 0.00 0.00 40.14 3.32
1842 2175 2.594592 GGCTGCACGGGAACAAGT 60.595 61.111 0.50 0.00 0.00 3.16
1984 2317 3.983741 ACTTGACTGAACTGTGAGTAGC 58.016 45.455 0.00 0.00 0.00 3.58
2001 2340 8.251750 GTGAGTAGCACATACAGTTTCATTTA 57.748 34.615 0.00 0.00 46.91 1.40
2007 2346 7.138736 AGCACATACAGTTTCATTTAACACAC 58.861 34.615 0.00 0.00 0.00 3.82
2008 2347 6.362283 GCACATACAGTTTCATTTAACACACC 59.638 38.462 0.00 0.00 0.00 4.16
2009 2348 7.648142 CACATACAGTTTCATTTAACACACCT 58.352 34.615 0.00 0.00 0.00 4.00
2193 2559 5.713389 TGACGGATTAAGTTCTCCAGTTCTA 59.287 40.000 5.51 0.00 0.00 2.10
2194 2560 6.380274 TGACGGATTAAGTTCTCCAGTTCTAT 59.620 38.462 5.51 0.00 0.00 1.98
2195 2561 7.558807 TGACGGATTAAGTTCTCCAGTTCTATA 59.441 37.037 5.51 0.00 0.00 1.31
2353 2720 3.378427 AGCACTGACAACCTGAACTTTTC 59.622 43.478 0.00 0.00 0.00 2.29
2426 2793 5.583457 TGTAGCCTTTTATTCCGTTAAGAGC 59.417 40.000 0.00 0.00 0.00 4.09
2430 2797 4.524053 CTTTTATTCCGTTAAGAGCCCCT 58.476 43.478 0.00 0.00 0.00 4.79
2484 2851 6.717997 GGGAAAAGGTGAAAGGTAGTTGAATA 59.282 38.462 0.00 0.00 0.00 1.75
2500 2867 7.686438 AGTTGAATACATTGTAATCAGTGCA 57.314 32.000 12.93 0.00 35.19 4.57
2554 2921 6.992123 CCTTTAGTGCATATCCAGTGTTATCA 59.008 38.462 0.00 0.00 0.00 2.15
2567 2934 9.920946 ATCCAGTGTTATCAGTTTGGTATATTT 57.079 29.630 0.00 0.00 0.00 1.40
2611 3230 0.247460 CTTGACACAGATGGCTCGGA 59.753 55.000 0.00 0.00 33.48 4.55
2615 3234 0.396435 ACACAGATGGCTCGGAAACA 59.604 50.000 0.00 0.00 0.00 2.83
2641 3260 1.250328 CATGCAGTTTCCCTTGCTGA 58.750 50.000 0.00 0.00 40.87 4.26
2651 3270 0.040067 CCCTTGCTGAGTGCGAAAAC 60.040 55.000 0.00 0.00 46.63 2.43
2653 3272 0.304705 CTTGCTGAGTGCGAAAACGT 59.695 50.000 0.00 0.00 46.63 3.99
2654 3273 0.730265 TTGCTGAGTGCGAAAACGTT 59.270 45.000 0.00 0.00 46.63 3.99
2688 3308 4.990257 CCATTAGTGTTTTGATGGCTCAG 58.010 43.478 0.00 0.00 33.34 3.35
2719 3339 7.725844 TGTCTCTGAGTATGCTTATTCCAGATA 59.274 37.037 4.32 0.00 0.00 1.98
2730 3350 7.988737 TGCTTATTCCAGATAATTGTGACTTG 58.011 34.615 0.00 0.00 0.00 3.16
2763 3383 7.602644 TCTGAAATAACCACTATTATCGATGGC 59.397 37.037 8.54 0.00 35.49 4.40
2777 3397 5.649782 ATCGATGGCTTTTGTTTGAAGAT 57.350 34.783 0.00 0.00 0.00 2.40
2781 3401 4.320608 TGGCTTTTGTTTGAAGATGTCC 57.679 40.909 0.00 0.00 0.00 4.02
2826 3446 1.115930 AGTGAGACACAACTCCGGCT 61.116 55.000 0.00 0.00 36.74 5.52
2879 3512 5.451342 GCTTTTGTTTGAAGACGTCTACAAC 59.549 40.000 24.28 22.01 33.84 3.32
2887 3520 8.492748 GTTTGAAGACGTCTACAACAATTATCA 58.507 33.333 20.39 11.65 0.00 2.15
2888 3521 8.771920 TTGAAGACGTCTACAACAATTATCAT 57.228 30.769 20.39 0.00 0.00 2.45
2889 3522 8.185003 TGAAGACGTCTACAACAATTATCATG 57.815 34.615 20.39 0.00 0.00 3.07
2890 3523 7.277760 TGAAGACGTCTACAACAATTATCATGG 59.722 37.037 20.39 0.00 0.00 3.66
2891 3524 6.640518 AGACGTCTACAACAATTATCATGGT 58.359 36.000 18.46 0.00 0.00 3.55
2892 3525 7.778083 AGACGTCTACAACAATTATCATGGTA 58.222 34.615 18.46 0.00 0.00 3.25
2893 3526 8.421784 AGACGTCTACAACAATTATCATGGTAT 58.578 33.333 18.46 0.00 0.00 2.73
2894 3527 8.589335 ACGTCTACAACAATTATCATGGTATC 57.411 34.615 0.00 0.00 0.00 2.24
2895 3528 7.381408 ACGTCTACAACAATTATCATGGTATCG 59.619 37.037 0.00 0.00 0.00 2.92
2896 3529 7.593644 CGTCTACAACAATTATCATGGTATCGA 59.406 37.037 0.00 0.00 0.00 3.59
2897 3530 8.916654 GTCTACAACAATTATCATGGTATCGAG 58.083 37.037 0.00 0.00 0.00 4.04
2898 3531 8.856103 TCTACAACAATTATCATGGTATCGAGA 58.144 33.333 0.00 0.00 0.00 4.04
2899 3532 7.953158 ACAACAATTATCATGGTATCGAGAG 57.047 36.000 0.00 0.00 0.00 3.20
2900 3533 7.500992 ACAACAATTATCATGGTATCGAGAGT 58.499 34.615 0.00 0.00 0.00 3.24
2901 3534 7.439356 ACAACAATTATCATGGTATCGAGAGTG 59.561 37.037 0.00 0.00 0.00 3.51
2902 3535 7.055667 ACAATTATCATGGTATCGAGAGTGT 57.944 36.000 0.00 0.00 0.00 3.55
2903 3536 6.925718 ACAATTATCATGGTATCGAGAGTGTG 59.074 38.462 0.00 0.00 0.00 3.82
2904 3537 6.901081 ATTATCATGGTATCGAGAGTGTGA 57.099 37.500 0.00 0.00 0.00 3.58
2905 3538 6.901081 TTATCATGGTATCGAGAGTGTGAT 57.099 37.500 9.40 9.40 0.00 3.06
2906 3539 7.996098 TTATCATGGTATCGAGAGTGTGATA 57.004 36.000 0.00 7.91 0.00 2.15
2907 3540 5.690997 TCATGGTATCGAGAGTGTGATAC 57.309 43.478 4.25 4.25 43.92 2.24
2908 3541 5.130350 TCATGGTATCGAGAGTGTGATACA 58.870 41.667 12.75 2.36 45.57 2.29
2919 3552 2.177394 TGTGATACACAACGGCATGT 57.823 45.000 1.99 0.00 41.69 3.21
2920 3553 3.320673 TGTGATACACAACGGCATGTA 57.679 42.857 1.99 0.00 41.69 2.29
2921 3554 3.258228 TGTGATACACAACGGCATGTAG 58.742 45.455 1.99 0.00 41.69 2.74
2922 3555 2.030457 GTGATACACAACGGCATGTAGC 59.970 50.000 0.00 4.20 38.03 3.58
2923 3556 4.472056 GTGATACACAACGGCATGTAGCA 61.472 47.826 8.50 8.50 43.42 3.49
2924 3557 3.866449 TGATACACAACGGCATGTAGCAA 60.866 43.478 9.73 0.00 42.87 3.91
2925 3558 5.160721 TGATACACAACGGCATGTAGCAAT 61.161 41.667 9.73 0.00 42.87 3.56
2926 3559 7.152593 TGATACACAACGGCATGTAGCAATG 62.153 44.000 9.73 0.00 42.87 2.82
2937 3570 6.258230 GCATGTAGCAATGATAATTAGGCA 57.742 37.500 0.00 0.00 44.79 4.75
2938 3571 6.088824 GCATGTAGCAATGATAATTAGGCAC 58.911 40.000 0.00 0.00 44.79 5.01
2939 3572 5.922739 TGTAGCAATGATAATTAGGCACG 57.077 39.130 0.00 0.00 0.00 5.34
2940 3573 5.606505 TGTAGCAATGATAATTAGGCACGA 58.393 37.500 0.00 0.00 0.00 4.35
2941 3574 5.465390 TGTAGCAATGATAATTAGGCACGAC 59.535 40.000 0.00 0.00 0.00 4.34
2942 3575 3.815401 AGCAATGATAATTAGGCACGACC 59.185 43.478 0.00 0.00 39.61 4.79
2943 3576 3.563808 GCAATGATAATTAGGCACGACCA 59.436 43.478 0.00 0.00 43.14 4.02
2944 3577 4.216257 GCAATGATAATTAGGCACGACCAT 59.784 41.667 0.00 0.00 43.14 3.55
2945 3578 5.692814 CAATGATAATTAGGCACGACCATG 58.307 41.667 0.00 0.00 43.14 3.66
2946 3579 3.738982 TGATAATTAGGCACGACCATGG 58.261 45.455 11.19 11.19 43.14 3.66
2947 3580 2.631160 TAATTAGGCACGACCATGGG 57.369 50.000 18.09 0.85 43.14 4.00
2948 3581 0.751643 AATTAGGCACGACCATGGGC 60.752 55.000 18.09 13.46 43.14 5.36
2949 3582 2.624674 ATTAGGCACGACCATGGGCC 62.625 60.000 19.10 19.10 46.77 5.80
2952 3585 3.443045 GCACGACCATGGGCCAAG 61.443 66.667 18.09 5.87 0.00 3.61
2953 3586 3.443045 CACGACCATGGGCCAAGC 61.443 66.667 18.09 0.00 0.00 4.01
2954 3587 3.965258 ACGACCATGGGCCAAGCA 61.965 61.111 18.09 0.00 0.00 3.91
2955 3588 2.440796 CGACCATGGGCCAAGCAT 60.441 61.111 18.09 0.00 0.00 3.79
2956 3589 2.053865 CGACCATGGGCCAAGCATT 61.054 57.895 18.09 0.00 0.00 3.56
2970 3603 4.100707 CAAGCATTGGTGACCAGTTATG 57.899 45.455 3.77 7.43 43.94 1.90
2971 3604 3.439857 AGCATTGGTGACCAGTTATGT 57.560 42.857 14.34 1.80 33.81 2.29
2972 3605 3.766545 AGCATTGGTGACCAGTTATGTT 58.233 40.909 14.34 7.32 33.81 2.71
2973 3606 4.151883 AGCATTGGTGACCAGTTATGTTT 58.848 39.130 14.34 3.37 33.81 2.83
2974 3607 4.218417 AGCATTGGTGACCAGTTATGTTTC 59.782 41.667 14.34 1.17 33.81 2.78
2975 3608 4.218417 GCATTGGTGACCAGTTATGTTTCT 59.782 41.667 14.34 0.00 33.81 2.52
2976 3609 5.278957 GCATTGGTGACCAGTTATGTTTCTT 60.279 40.000 14.34 0.00 33.81 2.52
2977 3610 6.072175 GCATTGGTGACCAGTTATGTTTCTTA 60.072 38.462 14.34 0.00 33.81 2.10
2978 3611 7.523052 GCATTGGTGACCAGTTATGTTTCTTAA 60.523 37.037 14.34 0.00 33.81 1.85
2979 3612 7.504924 TTGGTGACCAGTTATGTTTCTTAAG 57.495 36.000 3.77 0.00 33.81 1.85
2980 3613 6.833041 TGGTGACCAGTTATGTTTCTTAAGA 58.167 36.000 0.00 0.00 0.00 2.10
2981 3614 7.284074 TGGTGACCAGTTATGTTTCTTAAGAA 58.716 34.615 13.99 13.99 0.00 2.52
2982 3615 7.227910 TGGTGACCAGTTATGTTTCTTAAGAAC 59.772 37.037 17.51 12.75 33.13 3.01
2983 3616 7.227910 GGTGACCAGTTATGTTTCTTAAGAACA 59.772 37.037 17.51 17.32 33.13 3.18
2984 3617 8.617809 GTGACCAGTTATGTTTCTTAAGAACAA 58.382 33.333 17.51 9.19 33.13 2.83
2985 3618 8.836413 TGACCAGTTATGTTTCTTAAGAACAAG 58.164 33.333 17.51 4.39 33.13 3.16
2986 3619 8.974060 ACCAGTTATGTTTCTTAAGAACAAGA 57.026 30.769 17.51 3.40 33.13 3.02
2987 3620 9.574516 ACCAGTTATGTTTCTTAAGAACAAGAT 57.425 29.630 17.51 10.44 34.59 2.40
2988 3621 9.831737 CCAGTTATGTTTCTTAAGAACAAGATG 57.168 33.333 17.51 14.01 34.59 2.90
2994 3627 8.519799 TGTTTCTTAAGAACAAGATGAAAGGT 57.480 30.769 17.51 0.00 34.59 3.50
2995 3628 8.966868 TGTTTCTTAAGAACAAGATGAAAGGTT 58.033 29.630 17.51 0.00 34.59 3.50
2996 3629 9.803315 GTTTCTTAAGAACAAGATGAAAGGTTT 57.197 29.630 17.51 0.00 34.59 3.27
3017 3650 8.515414 AGGTTTCAACACTAAATAATGAAGAGC 58.485 33.333 0.00 0.00 32.21 4.09
3018 3651 8.296713 GGTTTCAACACTAAATAATGAAGAGCA 58.703 33.333 0.00 0.00 32.21 4.26
3019 3652 9.334693 GTTTCAACACTAAATAATGAAGAGCAG 57.665 33.333 0.00 0.00 32.21 4.24
3020 3653 8.621532 TTCAACACTAAATAATGAAGAGCAGT 57.378 30.769 0.00 0.00 0.00 4.40
3021 3654 8.621532 TCAACACTAAATAATGAAGAGCAGTT 57.378 30.769 0.00 0.00 0.00 3.16
3022 3655 9.719355 TCAACACTAAATAATGAAGAGCAGTTA 57.281 29.630 0.00 0.00 0.00 2.24
3042 3675 8.545229 CAGTTAATGCAAAATATTGTGGGAAA 57.455 30.769 7.74 0.00 38.85 3.13
3043 3676 8.658609 CAGTTAATGCAAAATATTGTGGGAAAG 58.341 33.333 7.74 0.00 38.85 2.62
3044 3677 8.592809 AGTTAATGCAAAATATTGTGGGAAAGA 58.407 29.630 7.74 0.00 38.85 2.52
3045 3678 8.872845 GTTAATGCAAAATATTGTGGGAAAGAG 58.127 33.333 7.74 0.00 38.85 2.85
3046 3679 4.819769 TGCAAAATATTGTGGGAAAGAGC 58.180 39.130 7.74 0.00 38.85 4.09
3047 3680 4.183865 GCAAAATATTGTGGGAAAGAGCC 58.816 43.478 7.74 0.00 38.85 4.70
3048 3681 4.322650 GCAAAATATTGTGGGAAAGAGCCA 60.323 41.667 7.74 0.00 38.85 4.75
3049 3682 5.792741 CAAAATATTGTGGGAAAGAGCCAA 58.207 37.500 0.00 0.00 0.00 4.52
3050 3683 6.229733 CAAAATATTGTGGGAAAGAGCCAAA 58.770 36.000 0.00 0.00 0.00 3.28
3051 3684 6.625532 AAATATTGTGGGAAAGAGCCAAAT 57.374 33.333 0.00 0.00 0.00 2.32
3052 3685 5.859205 ATATTGTGGGAAAGAGCCAAATC 57.141 39.130 0.00 0.00 0.00 2.17
3053 3686 1.923356 TGTGGGAAAGAGCCAAATCC 58.077 50.000 0.00 0.00 0.00 3.01
3054 3687 1.146774 TGTGGGAAAGAGCCAAATCCA 59.853 47.619 0.00 0.00 33.48 3.41
3055 3688 2.247358 GTGGGAAAGAGCCAAATCCAA 58.753 47.619 0.00 0.00 33.48 3.53
3056 3689 2.232208 GTGGGAAAGAGCCAAATCCAAG 59.768 50.000 0.00 0.00 33.48 3.61
3057 3690 1.205655 GGGAAAGAGCCAAATCCAAGC 59.794 52.381 0.00 0.00 33.48 4.01
3058 3691 1.895131 GGAAAGAGCCAAATCCAAGCA 59.105 47.619 0.00 0.00 32.08 3.91
3059 3692 2.353109 GGAAAGAGCCAAATCCAAGCAC 60.353 50.000 0.00 0.00 32.08 4.40
3060 3693 1.999648 AAGAGCCAAATCCAAGCACA 58.000 45.000 0.00 0.00 0.00 4.57
3061 3694 1.999648 AGAGCCAAATCCAAGCACAA 58.000 45.000 0.00 0.00 0.00 3.33
3062 3695 2.318908 AGAGCCAAATCCAAGCACAAA 58.681 42.857 0.00 0.00 0.00 2.83
3063 3696 2.699846 AGAGCCAAATCCAAGCACAAAA 59.300 40.909 0.00 0.00 0.00 2.44
3064 3697 2.802247 GAGCCAAATCCAAGCACAAAAC 59.198 45.455 0.00 0.00 0.00 2.43
3065 3698 2.170187 AGCCAAATCCAAGCACAAAACA 59.830 40.909 0.00 0.00 0.00 2.83
3066 3699 2.287644 GCCAAATCCAAGCACAAAACAC 59.712 45.455 0.00 0.00 0.00 3.32
3067 3700 3.795877 CCAAATCCAAGCACAAAACACT 58.204 40.909 0.00 0.00 0.00 3.55
3068 3701 4.190772 CCAAATCCAAGCACAAAACACTT 58.809 39.130 0.00 0.00 0.00 3.16
3069 3702 5.355596 CCAAATCCAAGCACAAAACACTTA 58.644 37.500 0.00 0.00 0.00 2.24
3070 3703 5.990996 CCAAATCCAAGCACAAAACACTTAT 59.009 36.000 0.00 0.00 0.00 1.73
3071 3704 6.482973 CCAAATCCAAGCACAAAACACTTATT 59.517 34.615 0.00 0.00 0.00 1.40
3072 3705 7.346695 CAAATCCAAGCACAAAACACTTATTG 58.653 34.615 0.00 0.00 0.00 1.90
3073 3706 5.843673 TCCAAGCACAAAACACTTATTGA 57.156 34.783 0.00 0.00 0.00 2.57
3074 3707 6.403866 TCCAAGCACAAAACACTTATTGAT 57.596 33.333 0.00 0.00 0.00 2.57
3075 3708 7.517614 TCCAAGCACAAAACACTTATTGATA 57.482 32.000 0.00 0.00 0.00 2.15
3076 3709 8.121305 TCCAAGCACAAAACACTTATTGATAT 57.879 30.769 0.00 0.00 0.00 1.63
3077 3710 8.243426 TCCAAGCACAAAACACTTATTGATATC 58.757 33.333 0.00 0.00 0.00 1.63
3078 3711 8.246180 CCAAGCACAAAACACTTATTGATATCT 58.754 33.333 3.98 0.00 0.00 1.98
3079 3712 9.282247 CAAGCACAAAACACTTATTGATATCTC 57.718 33.333 3.98 0.00 0.00 2.75
3080 3713 8.565896 AGCACAAAACACTTATTGATATCTCA 57.434 30.769 3.98 0.00 0.00 3.27
3081 3714 8.454106 AGCACAAAACACTTATTGATATCTCAC 58.546 33.333 3.98 0.00 0.00 3.51
3082 3715 8.236586 GCACAAAACACTTATTGATATCTCACA 58.763 33.333 3.98 0.00 0.00 3.58
3083 3716 9.546909 CACAAAACACTTATTGATATCTCACAC 57.453 33.333 3.98 0.00 0.00 3.82
3084 3717 9.283768 ACAAAACACTTATTGATATCTCACACA 57.716 29.630 3.98 0.00 0.00 3.72
3085 3718 9.546909 CAAAACACTTATTGATATCTCACACAC 57.453 33.333 3.98 0.00 0.00 3.82
3086 3719 9.507329 AAAACACTTATTGATATCTCACACACT 57.493 29.630 3.98 0.00 0.00 3.55
3088 3721 9.587772 AACACTTATTGATATCTCACACACTAC 57.412 33.333 3.98 0.00 0.00 2.73
3089 3722 7.915923 ACACTTATTGATATCTCACACACTACG 59.084 37.037 3.98 0.00 0.00 3.51
3090 3723 7.379797 CACTTATTGATATCTCACACACTACGG 59.620 40.741 3.98 0.00 0.00 4.02
3091 3724 7.284716 ACTTATTGATATCTCACACACTACGGA 59.715 37.037 3.98 0.00 0.00 4.69
3092 3725 6.656632 ATTGATATCTCACACACTACGGAT 57.343 37.500 3.98 0.00 0.00 4.18
3093 3726 6.465439 TTGATATCTCACACACTACGGATT 57.535 37.500 3.98 0.00 0.00 3.01
3094 3727 6.465439 TGATATCTCACACACTACGGATTT 57.535 37.500 3.98 0.00 0.00 2.17
3095 3728 7.576861 TGATATCTCACACACTACGGATTTA 57.423 36.000 3.98 0.00 0.00 1.40
3096 3729 8.178313 TGATATCTCACACACTACGGATTTAT 57.822 34.615 3.98 0.00 0.00 1.40
3097 3730 9.292195 TGATATCTCACACACTACGGATTTATA 57.708 33.333 3.98 0.00 0.00 0.98
3101 3734 9.909644 ATCTCACACACTACGGATTTATATTAC 57.090 33.333 0.00 0.00 0.00 1.89
3102 3735 9.128404 TCTCACACACTACGGATTTATATTACT 57.872 33.333 0.00 0.00 0.00 2.24
3103 3736 9.181805 CTCACACACTACGGATTTATATTACTG 57.818 37.037 0.00 0.00 0.00 2.74
3104 3737 8.905850 TCACACACTACGGATTTATATTACTGA 58.094 33.333 0.00 0.00 0.00 3.41
3105 3738 9.181805 CACACACTACGGATTTATATTACTGAG 57.818 37.037 0.00 0.00 0.00 3.35
3106 3739 8.910944 ACACACTACGGATTTATATTACTGAGT 58.089 33.333 0.00 0.00 0.00 3.41
3107 3740 9.181805 CACACTACGGATTTATATTACTGAGTG 57.818 37.037 0.00 0.00 36.39 3.51
3108 3741 8.910944 ACACTACGGATTTATATTACTGAGTGT 58.089 33.333 0.00 0.00 38.18 3.55
3109 3742 9.745880 CACTACGGATTTATATTACTGAGTGTT 57.254 33.333 0.00 0.00 0.00 3.32
3122 3755 7.766219 TTACTGAGTGTTAGAACTGAACAAC 57.234 36.000 0.00 0.00 38.48 3.32
3123 3756 5.116882 ACTGAGTGTTAGAACTGAACAACC 58.883 41.667 0.00 0.00 38.48 3.77
3124 3757 5.104900 ACTGAGTGTTAGAACTGAACAACCT 60.105 40.000 0.00 0.00 38.48 3.50
3125 3758 6.097839 ACTGAGTGTTAGAACTGAACAACCTA 59.902 38.462 0.00 0.00 38.48 3.08
3126 3759 6.513180 TGAGTGTTAGAACTGAACAACCTAG 58.487 40.000 0.00 0.00 38.48 3.02
3127 3760 5.298347 AGTGTTAGAACTGAACAACCTAGC 58.702 41.667 0.00 0.00 38.48 3.42
3128 3761 5.054477 GTGTTAGAACTGAACAACCTAGCA 58.946 41.667 0.00 0.00 38.48 3.49
3129 3762 5.526111 GTGTTAGAACTGAACAACCTAGCAA 59.474 40.000 0.00 0.00 38.48 3.91
3130 3763 5.758296 TGTTAGAACTGAACAACCTAGCAAG 59.242 40.000 0.00 0.00 33.93 4.01
3131 3764 3.142174 AGAACTGAACAACCTAGCAAGC 58.858 45.455 0.00 0.00 0.00 4.01
3132 3765 2.638480 ACTGAACAACCTAGCAAGCA 57.362 45.000 0.00 0.00 0.00 3.91
3133 3766 2.498167 ACTGAACAACCTAGCAAGCAG 58.502 47.619 0.00 0.00 0.00 4.24
3134 3767 2.104792 ACTGAACAACCTAGCAAGCAGA 59.895 45.455 0.00 0.00 0.00 4.26
3135 3768 2.740981 CTGAACAACCTAGCAAGCAGAG 59.259 50.000 0.00 0.00 0.00 3.35
3136 3769 2.104792 TGAACAACCTAGCAAGCAGAGT 59.895 45.455 0.00 0.00 0.00 3.24
3137 3770 3.323691 TGAACAACCTAGCAAGCAGAGTA 59.676 43.478 0.00 0.00 0.00 2.59
3138 3771 4.020218 TGAACAACCTAGCAAGCAGAGTAT 60.020 41.667 0.00 0.00 0.00 2.12
3139 3772 5.186992 TGAACAACCTAGCAAGCAGAGTATA 59.813 40.000 0.00 0.00 0.00 1.47
3140 3773 5.269505 ACAACCTAGCAAGCAGAGTATAG 57.730 43.478 0.00 0.00 0.00 1.31
3141 3774 4.712337 ACAACCTAGCAAGCAGAGTATAGT 59.288 41.667 0.00 0.00 0.00 2.12
3142 3775 5.892119 ACAACCTAGCAAGCAGAGTATAGTA 59.108 40.000 0.00 0.00 0.00 1.82
3143 3776 6.039941 ACAACCTAGCAAGCAGAGTATAGTAG 59.960 42.308 0.00 0.00 0.00 2.57
3144 3777 5.942961 ACCTAGCAAGCAGAGTATAGTAGA 58.057 41.667 0.00 0.00 0.00 2.59
3145 3778 6.366340 ACCTAGCAAGCAGAGTATAGTAGAA 58.634 40.000 0.00 0.00 0.00 2.10
3146 3779 6.834451 ACCTAGCAAGCAGAGTATAGTAGAAA 59.166 38.462 0.00 0.00 0.00 2.52
3147 3780 7.142680 CCTAGCAAGCAGAGTATAGTAGAAAC 58.857 42.308 0.00 0.00 0.00 2.78
3148 3781 6.783708 AGCAAGCAGAGTATAGTAGAAACT 57.216 37.500 0.00 0.00 39.91 2.66
3149 3782 6.568869 AGCAAGCAGAGTATAGTAGAAACTG 58.431 40.000 0.00 0.00 36.36 3.16
3150 3783 6.378564 AGCAAGCAGAGTATAGTAGAAACTGA 59.621 38.462 0.00 0.00 36.36 3.41
3151 3784 7.036220 GCAAGCAGAGTATAGTAGAAACTGAA 58.964 38.462 0.00 0.00 36.36 3.02
3152 3785 7.545965 GCAAGCAGAGTATAGTAGAAACTGAAA 59.454 37.037 0.00 0.00 36.36 2.69
3153 3786 9.081997 CAAGCAGAGTATAGTAGAAACTGAAAG 57.918 37.037 0.00 0.00 36.36 2.62
3154 3787 8.582657 AGCAGAGTATAGTAGAAACTGAAAGA 57.417 34.615 0.00 0.00 36.36 2.52
3155 3788 8.682710 AGCAGAGTATAGTAGAAACTGAAAGAG 58.317 37.037 0.00 0.00 36.36 2.85
3156 3789 8.463607 GCAGAGTATAGTAGAAACTGAAAGAGT 58.536 37.037 0.00 0.00 36.36 3.24
3163 3796 7.716768 AGTAGAAACTGAAAGAGTAACTTGC 57.283 36.000 0.00 0.00 35.11 4.01
3164 3797 7.272978 AGTAGAAACTGAAAGAGTAACTTGCA 58.727 34.615 0.00 0.00 41.43 4.08
3165 3798 7.769044 AGTAGAAACTGAAAGAGTAACTTGCAA 59.231 33.333 0.00 0.00 42.86 4.08
3166 3799 7.020914 AGAAACTGAAAGAGTAACTTGCAAG 57.979 36.000 24.84 24.84 42.86 4.01
3167 3800 5.757850 AACTGAAAGAGTAACTTGCAAGG 57.242 39.130 29.18 12.28 42.86 3.61
3168 3801 5.036117 ACTGAAAGAGTAACTTGCAAGGA 57.964 39.130 29.18 14.76 42.86 3.36
3169 3802 5.625150 ACTGAAAGAGTAACTTGCAAGGAT 58.375 37.500 29.18 19.66 42.86 3.24
3170 3803 6.064717 ACTGAAAGAGTAACTTGCAAGGATT 58.935 36.000 29.18 17.85 42.86 3.01
3171 3804 7.224297 ACTGAAAGAGTAACTTGCAAGGATTA 58.776 34.615 29.18 16.85 42.86 1.75
3172 3805 7.389053 ACTGAAAGAGTAACTTGCAAGGATTAG 59.611 37.037 29.18 14.59 42.86 1.73
3173 3806 7.450074 TGAAAGAGTAACTTGCAAGGATTAGA 58.550 34.615 29.18 5.84 40.81 2.10
3174 3807 7.604164 TGAAAGAGTAACTTGCAAGGATTAGAG 59.396 37.037 29.18 3.67 40.81 2.43
3175 3808 6.859112 AGAGTAACTTGCAAGGATTAGAGA 57.141 37.500 29.18 3.44 0.00 3.10
3176 3809 7.246171 AGAGTAACTTGCAAGGATTAGAGAA 57.754 36.000 29.18 0.00 0.00 2.87
3177 3810 7.856415 AGAGTAACTTGCAAGGATTAGAGAAT 58.144 34.615 29.18 2.15 0.00 2.40
3178 3811 8.982723 AGAGTAACTTGCAAGGATTAGAGAATA 58.017 33.333 29.18 4.93 0.00 1.75
3179 3812 8.950208 AGTAACTTGCAAGGATTAGAGAATAC 57.050 34.615 29.18 14.56 0.00 1.89
3180 3813 8.540388 AGTAACTTGCAAGGATTAGAGAATACA 58.460 33.333 29.18 0.00 0.00 2.29
3181 3814 9.162764 GTAACTTGCAAGGATTAGAGAATACAA 57.837 33.333 29.18 0.00 0.00 2.41
3182 3815 8.635765 AACTTGCAAGGATTAGAGAATACAAA 57.364 30.769 29.18 0.00 0.00 2.83
3183 3816 8.045176 ACTTGCAAGGATTAGAGAATACAAAC 57.955 34.615 29.18 0.00 0.00 2.93
3184 3817 7.665559 ACTTGCAAGGATTAGAGAATACAAACA 59.334 33.333 29.18 0.00 0.00 2.83
3185 3818 7.377766 TGCAAGGATTAGAGAATACAAACAC 57.622 36.000 0.00 0.00 0.00 3.32
3186 3819 6.939730 TGCAAGGATTAGAGAATACAAACACA 59.060 34.615 0.00 0.00 0.00 3.72
3187 3820 7.611467 TGCAAGGATTAGAGAATACAAACACAT 59.389 33.333 0.00 0.00 0.00 3.21
3188 3821 8.462016 GCAAGGATTAGAGAATACAAACACATT 58.538 33.333 0.00 0.00 0.00 2.71
3189 3822 9.778993 CAAGGATTAGAGAATACAAACACATTG 57.221 33.333 0.00 0.00 44.95 2.82
3190 3823 8.511604 AGGATTAGAGAATACAAACACATTGG 57.488 34.615 0.00 0.00 43.66 3.16
3191 3824 8.328758 AGGATTAGAGAATACAAACACATTGGA 58.671 33.333 0.00 0.00 43.66 3.53
3192 3825 8.398665 GGATTAGAGAATACAAACACATTGGAC 58.601 37.037 0.00 0.00 43.66 4.02
3193 3826 8.862325 ATTAGAGAATACAAACACATTGGACA 57.138 30.769 0.00 0.00 43.66 4.02
3194 3827 6.560253 AGAGAATACAAACACATTGGACAC 57.440 37.500 0.00 0.00 43.66 3.67
3195 3828 5.179368 AGAGAATACAAACACATTGGACACG 59.821 40.000 0.00 0.00 43.66 4.49
3196 3829 5.060506 AGAATACAAACACATTGGACACGA 58.939 37.500 0.00 0.00 43.66 4.35
3197 3830 5.705441 AGAATACAAACACATTGGACACGAT 59.295 36.000 0.00 0.00 43.66 3.73
3198 3831 3.624326 ACAAACACATTGGACACGATG 57.376 42.857 0.00 0.00 43.66 3.84
3199 3832 3.210227 ACAAACACATTGGACACGATGA 58.790 40.909 2.16 0.00 43.66 2.92
3200 3833 3.820467 ACAAACACATTGGACACGATGAT 59.180 39.130 2.16 0.00 43.66 2.45
3201 3834 4.278170 ACAAACACATTGGACACGATGATT 59.722 37.500 2.16 0.00 43.66 2.57
3202 3835 5.221224 ACAAACACATTGGACACGATGATTT 60.221 36.000 2.16 0.72 43.66 2.17
3203 3836 5.452078 AACACATTGGACACGATGATTTT 57.548 34.783 2.16 0.00 40.35 1.82
3204 3837 5.046910 ACACATTGGACACGATGATTTTC 57.953 39.130 2.16 0.00 40.35 2.29
3205 3838 4.082787 ACACATTGGACACGATGATTTTCC 60.083 41.667 2.16 0.00 40.35 3.13
3206 3839 3.126858 ACATTGGACACGATGATTTTCCG 59.873 43.478 2.16 0.00 40.35 4.30
3207 3840 1.732941 TGGACACGATGATTTTCCGG 58.267 50.000 0.00 0.00 0.00 5.14
3208 3841 1.002659 TGGACACGATGATTTTCCGGT 59.997 47.619 0.00 0.00 0.00 5.28
3209 3842 1.396996 GGACACGATGATTTTCCGGTG 59.603 52.381 0.00 0.00 0.00 4.94
3210 3843 2.343101 GACACGATGATTTTCCGGTGA 58.657 47.619 0.00 0.00 0.00 4.02
3211 3844 2.936498 GACACGATGATTTTCCGGTGAT 59.064 45.455 0.00 0.00 0.00 3.06
3212 3845 3.343617 ACACGATGATTTTCCGGTGATT 58.656 40.909 0.00 0.00 0.00 2.57
3213 3846 3.374058 ACACGATGATTTTCCGGTGATTC 59.626 43.478 0.00 0.00 0.00 2.52
3214 3847 2.607635 ACGATGATTTTCCGGTGATTCG 59.392 45.455 0.00 5.41 0.00 3.34
3224 3857 1.217882 CGGTGATTCGGATAGTTGGC 58.782 55.000 0.00 0.00 0.00 4.52
3225 3858 1.217882 GGTGATTCGGATAGTTGGCG 58.782 55.000 0.00 0.00 0.00 5.69
3226 3859 1.202486 GGTGATTCGGATAGTTGGCGA 60.202 52.381 0.00 0.00 0.00 5.54
3227 3860 2.548067 GGTGATTCGGATAGTTGGCGAT 60.548 50.000 0.00 0.00 0.00 4.58
3228 3861 2.476619 GTGATTCGGATAGTTGGCGATG 59.523 50.000 0.00 0.00 0.00 3.84
3229 3862 2.102420 TGATTCGGATAGTTGGCGATGT 59.898 45.455 0.00 0.00 0.00 3.06
3230 3863 2.218953 TTCGGATAGTTGGCGATGTC 57.781 50.000 0.00 0.00 0.00 3.06
3231 3864 1.399714 TCGGATAGTTGGCGATGTCT 58.600 50.000 0.00 0.00 0.00 3.41
3232 3865 2.578786 TCGGATAGTTGGCGATGTCTA 58.421 47.619 0.00 0.00 0.00 2.59
3233 3866 2.292569 TCGGATAGTTGGCGATGTCTAC 59.707 50.000 0.00 0.00 0.00 2.59
3234 3867 2.293677 CGGATAGTTGGCGATGTCTACT 59.706 50.000 0.00 0.00 0.00 2.57
3235 3868 3.609644 CGGATAGTTGGCGATGTCTACTC 60.610 52.174 0.00 0.00 0.00 2.59
3236 3869 3.305471 GGATAGTTGGCGATGTCTACTCC 60.305 52.174 0.00 0.00 0.00 3.85
3237 3870 1.557099 AGTTGGCGATGTCTACTCCA 58.443 50.000 0.00 0.00 0.00 3.86
3238 3871 1.204941 AGTTGGCGATGTCTACTCCAC 59.795 52.381 0.00 0.00 0.00 4.02
3239 3872 0.172578 TTGGCGATGTCTACTCCACG 59.827 55.000 0.00 0.00 0.00 4.94
3240 3873 0.963856 TGGCGATGTCTACTCCACGT 60.964 55.000 0.00 0.00 0.00 4.49
3241 3874 0.172803 GGCGATGTCTACTCCACGTT 59.827 55.000 0.00 0.00 0.00 3.99
3242 3875 1.269166 GCGATGTCTACTCCACGTTG 58.731 55.000 0.00 0.00 0.00 4.10
3243 3876 1.135489 GCGATGTCTACTCCACGTTGA 60.135 52.381 0.00 0.00 0.00 3.18
3244 3877 2.479730 GCGATGTCTACTCCACGTTGAT 60.480 50.000 0.00 0.00 30.37 2.57
3245 3878 3.108881 CGATGTCTACTCCACGTTGATG 58.891 50.000 0.00 0.00 30.37 3.07
3246 3879 3.448686 GATGTCTACTCCACGTTGATGG 58.551 50.000 0.00 0.00 41.57 3.51
3247 3880 2.521126 TGTCTACTCCACGTTGATGGA 58.479 47.619 0.00 0.00 46.92 3.41
3254 3887 2.766313 TCCACGTTGATGGAGTCTTTG 58.234 47.619 0.00 0.00 44.14 2.77
3255 3888 2.367241 TCCACGTTGATGGAGTCTTTGA 59.633 45.455 0.00 0.00 44.14 2.69
3256 3889 3.138304 CCACGTTGATGGAGTCTTTGAA 58.862 45.455 0.00 0.00 43.02 2.69
3257 3890 3.563808 CCACGTTGATGGAGTCTTTGAAA 59.436 43.478 0.00 0.00 43.02 2.69
3258 3891 4.036262 CCACGTTGATGGAGTCTTTGAAAA 59.964 41.667 0.00 0.00 43.02 2.29
3259 3892 5.449862 CCACGTTGATGGAGTCTTTGAAAAA 60.450 40.000 0.00 0.00 43.02 1.94
3281 3914 7.771927 AAAAATGTCTCAAGATCACAAGGAT 57.228 32.000 0.00 0.00 39.53 3.24
3290 3923 2.706339 ATCACAAGGATCTGGAGTGC 57.294 50.000 0.00 0.00 0.00 4.40
3291 3924 0.247460 TCACAAGGATCTGGAGTGCG 59.753 55.000 0.00 0.00 0.00 5.34
3292 3925 0.036952 CACAAGGATCTGGAGTGCGT 60.037 55.000 0.00 0.00 0.00 5.24
3293 3926 0.247736 ACAAGGATCTGGAGTGCGTC 59.752 55.000 0.00 0.00 0.00 5.19
3294 3927 0.247460 CAAGGATCTGGAGTGCGTCA 59.753 55.000 0.00 0.00 0.00 4.35
3295 3928 0.247736 AAGGATCTGGAGTGCGTCAC 59.752 55.000 2.28 2.28 34.10 3.67
3296 3929 1.153549 GGATCTGGAGTGCGTCACC 60.154 63.158 6.39 0.00 34.49 4.02
3297 3930 1.591703 GATCTGGAGTGCGTCACCA 59.408 57.895 6.39 3.25 34.49 4.17
3298 3931 0.037326 GATCTGGAGTGCGTCACCAA 60.037 55.000 6.39 0.00 36.43 3.67
3299 3932 0.615331 ATCTGGAGTGCGTCACCAAT 59.385 50.000 6.39 0.00 36.43 3.16
3300 3933 0.037326 TCTGGAGTGCGTCACCAATC 60.037 55.000 6.39 0.00 36.43 2.67
3301 3934 0.320683 CTGGAGTGCGTCACCAATCA 60.321 55.000 6.39 1.19 36.43 2.57
3302 3935 0.107643 TGGAGTGCGTCACCAATCAA 59.892 50.000 6.39 0.00 34.04 2.57
3303 3936 0.798776 GGAGTGCGTCACCAATCAAG 59.201 55.000 6.39 0.00 34.49 3.02
3304 3937 1.512926 GAGTGCGTCACCAATCAAGT 58.487 50.000 6.39 0.00 34.49 3.16
3305 3938 1.461127 GAGTGCGTCACCAATCAAGTC 59.539 52.381 6.39 0.00 34.49 3.01
3306 3939 1.202639 AGTGCGTCACCAATCAAGTCA 60.203 47.619 6.39 0.00 34.49 3.41
3307 3940 1.601903 GTGCGTCACCAATCAAGTCAA 59.398 47.619 0.00 0.00 0.00 3.18
3308 3941 1.601903 TGCGTCACCAATCAAGTCAAC 59.398 47.619 0.00 0.00 0.00 3.18
3309 3942 1.069227 GCGTCACCAATCAAGTCAACC 60.069 52.381 0.00 0.00 0.00 3.77
3310 3943 2.494059 CGTCACCAATCAAGTCAACCT 58.506 47.619 0.00 0.00 0.00 3.50
3311 3944 3.659786 CGTCACCAATCAAGTCAACCTA 58.340 45.455 0.00 0.00 0.00 3.08
3312 3945 4.253685 CGTCACCAATCAAGTCAACCTAT 58.746 43.478 0.00 0.00 0.00 2.57
3313 3946 4.695455 CGTCACCAATCAAGTCAACCTATT 59.305 41.667 0.00 0.00 0.00 1.73
3314 3947 5.872617 CGTCACCAATCAAGTCAACCTATTA 59.127 40.000 0.00 0.00 0.00 0.98
3315 3948 6.183360 CGTCACCAATCAAGTCAACCTATTAC 60.183 42.308 0.00 0.00 0.00 1.89
3316 3949 6.653320 GTCACCAATCAAGTCAACCTATTACA 59.347 38.462 0.00 0.00 0.00 2.41
3317 3950 7.336931 GTCACCAATCAAGTCAACCTATTACAT 59.663 37.037 0.00 0.00 0.00 2.29
3318 3951 7.552687 TCACCAATCAAGTCAACCTATTACATC 59.447 37.037 0.00 0.00 0.00 3.06
3319 3952 7.336679 CACCAATCAAGTCAACCTATTACATCA 59.663 37.037 0.00 0.00 0.00 3.07
3320 3953 8.055181 ACCAATCAAGTCAACCTATTACATCAT 58.945 33.333 0.00 0.00 0.00 2.45
3321 3954 8.347771 CCAATCAAGTCAACCTATTACATCATG 58.652 37.037 0.00 0.00 0.00 3.07
3322 3955 8.347771 CAATCAAGTCAACCTATTACATCATGG 58.652 37.037 0.00 0.00 0.00 3.66
3323 3956 6.957631 TCAAGTCAACCTATTACATCATGGT 58.042 36.000 0.00 0.00 0.00 3.55
3324 3957 7.402054 TCAAGTCAACCTATTACATCATGGTT 58.598 34.615 0.00 0.00 41.12 3.67
3325 3958 7.888021 TCAAGTCAACCTATTACATCATGGTTT 59.112 33.333 0.00 0.00 38.76 3.27
3326 3959 7.630242 AGTCAACCTATTACATCATGGTTTG 57.370 36.000 0.00 0.00 38.76 2.93
3327 3960 6.095440 AGTCAACCTATTACATCATGGTTTGC 59.905 38.462 0.00 0.00 38.76 3.68
3328 3961 5.948758 TCAACCTATTACATCATGGTTTGCA 59.051 36.000 0.00 0.00 38.76 4.08
3329 3962 5.835113 ACCTATTACATCATGGTTTGCAC 57.165 39.130 0.00 0.00 0.00 4.57
3330 3963 4.644685 ACCTATTACATCATGGTTTGCACC 59.355 41.667 0.00 0.00 44.56 5.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
228 230 0.612174 CCTGACCTTCTCCGTCCTCA 60.612 60.000 0.00 0.00 0.00 3.86
347 349 0.328450 AGGGCATAATGGTCCAGGGA 60.328 55.000 0.00 0.00 34.02 4.20
397 399 4.035675 GTCAGATCTTGCGGGGAATTTTAG 59.964 45.833 0.00 0.00 0.00 1.85
511 513 2.503331 CAAACGGGCATGGCTCATATA 58.497 47.619 19.78 0.00 0.00 0.86
512 514 1.321474 CAAACGGGCATGGCTCATAT 58.679 50.000 19.78 0.00 0.00 1.78
675 681 3.190535 GTGGAATAGTGGTGCATTTCGTT 59.809 43.478 0.00 0.00 0.00 3.85
795 812 2.028876 TGGAAGAATCGTAGATCGGCA 58.971 47.619 0.00 0.00 45.12 5.69
861 882 2.238144 TGGCTTTTCTCCTCTCATCCTG 59.762 50.000 0.00 0.00 0.00 3.86
866 887 1.271597 GCCTTGGCTTTTCTCCTCTCA 60.272 52.381 4.11 0.00 0.00 3.27
936 1040 1.529865 GGACGGGTCTTTTATATGCGC 59.470 52.381 0.00 0.00 0.00 6.09
1192 1440 1.283736 ACGGAGTTGACGTTGTTGAC 58.716 50.000 0.00 0.00 37.78 3.18
1193 1441 3.744941 ACGGAGTTGACGTTGTTGA 57.255 47.368 0.00 0.00 37.78 3.18
1237 1485 1.457455 GAGCAGGGAGGGAGGAGAG 60.457 68.421 0.00 0.00 0.00 3.20
1248 1496 0.401738 TTTGGACCTTGAGAGCAGGG 59.598 55.000 0.00 0.00 46.15 4.45
1252 1500 5.003804 TGAACTAATTTGGACCTTGAGAGC 58.996 41.667 0.00 0.00 0.00 4.09
1257 1508 7.775093 TCCTATCATGAACTAATTTGGACCTTG 59.225 37.037 0.00 0.00 0.00 3.61
1286 1545 2.964740 TGCAGCAAAGCAGAGTAGTAG 58.035 47.619 0.00 0.00 40.11 2.57
1320 1610 9.003112 GTAAAAAGGTCTTCTGAACGTTTAAAC 57.997 33.333 8.35 8.35 39.87 2.01
1761 2090 6.823689 GGAGACAATAAGCATTTCAACCTCTA 59.176 38.462 0.00 0.00 0.00 2.43
1832 2165 0.030638 CACCTGCAAACTTGTTCCCG 59.969 55.000 0.00 0.00 0.00 5.14
1842 2175 1.404449 CGACGGTATACCACCTGCAAA 60.404 52.381 21.76 0.00 46.19 3.68
1860 2193 4.351938 CAGACGGCCCAACGACGA 62.352 66.667 0.00 0.00 37.61 4.20
1984 2317 7.648142 AGGTGTGTTAAATGAAACTGTATGTG 58.352 34.615 0.00 0.00 0.00 3.21
2001 2340 2.665165 TGCAATTTCTGGAGGTGTGTT 58.335 42.857 0.00 0.00 0.00 3.32
2007 2346 2.731572 AGTGGATGCAATTTCTGGAGG 58.268 47.619 0.00 0.00 0.00 4.30
2008 2347 4.381292 GGAAAGTGGATGCAATTTCTGGAG 60.381 45.833 30.21 0.00 38.65 3.86
2009 2348 3.511146 GGAAAGTGGATGCAATTTCTGGA 59.489 43.478 30.21 0.00 38.65 3.86
2195 2561 8.629158 ACATGTATTGTACACACACAGAAAAAT 58.371 29.630 10.81 0.00 42.23 1.82
2377 2744 3.885297 CTCTTCCAGCAGTTTCAAAAGGA 59.115 43.478 0.00 0.00 0.00 3.36
2426 2793 4.713792 AGAAATGGATGTAAGCTAGGGG 57.286 45.455 0.00 0.00 0.00 4.79
2430 2797 8.768501 TTCTCTCTAGAAATGGATGTAAGCTA 57.231 34.615 0.00 0.00 38.81 3.32
2484 2851 6.579666 ATGAAGTTGCACTGATTACAATGT 57.420 33.333 0.00 0.00 0.00 2.71
2506 2873 9.638176 AAGGTGCAGAGAAAGATTCATTATTAT 57.362 29.630 0.00 0.00 0.00 1.28
2567 2934 9.129870 AGGGTTTCTATACTCTCCTGAGATATA 57.870 37.037 0.00 2.89 42.73 0.86
2611 3230 3.244181 GGAAACTGCATGGAATGGTGTTT 60.244 43.478 1.93 1.93 46.86 2.83
2615 3234 1.077663 AGGGAAACTGCATGGAATGGT 59.922 47.619 0.00 0.00 46.86 3.55
2627 3246 0.886490 CGCACTCAGCAAGGGAAACT 60.886 55.000 0.00 0.00 46.13 2.66
2651 3270 0.173935 AATGGCCATCACATGCAACG 59.826 50.000 21.08 0.00 0.00 4.10
2653 3272 2.427812 CACTAATGGCCATCACATGCAA 59.572 45.455 21.08 0.00 0.00 4.08
2654 3273 2.025898 CACTAATGGCCATCACATGCA 58.974 47.619 21.08 0.00 0.00 3.96
2687 3307 5.736951 AAGCATACTCAGAGACAACTTCT 57.263 39.130 3.79 0.00 37.23 2.85
2688 3308 7.223777 GGAATAAGCATACTCAGAGACAACTTC 59.776 40.741 3.79 0.00 0.00 3.01
2702 3322 9.277783 AGTCACAATTATCTGGAATAAGCATAC 57.722 33.333 0.00 0.00 0.00 2.39
2703 3323 9.851686 AAGTCACAATTATCTGGAATAAGCATA 57.148 29.630 0.00 0.00 0.00 3.14
2704 3324 8.627403 CAAGTCACAATTATCTGGAATAAGCAT 58.373 33.333 0.00 0.00 0.00 3.79
2719 3339 3.087031 CAGATGGCTCCAAGTCACAATT 58.913 45.455 0.00 0.00 29.65 2.32
2730 3350 3.891049 AGTGGTTATTTCAGATGGCTCC 58.109 45.455 0.00 0.00 0.00 4.70
2763 3383 8.870160 TTATTGTGGACATCTTCAAACAAAAG 57.130 30.769 0.00 0.00 36.46 2.27
2801 3421 3.490933 CGGAGTTGTGTCTCACTCTTTCA 60.491 47.826 1.72 0.00 36.30 2.69
2826 3446 4.728102 CCGTGGTCGCGCCTACAA 62.728 66.667 18.14 0.00 38.35 2.41
2836 3469 4.778143 AATGCTCGGCCCGTGGTC 62.778 66.667 1.63 0.00 0.00 4.02
2879 3512 7.147976 TCACACTCTCGATACCATGATAATTG 58.852 38.462 0.00 0.00 0.00 2.32
2887 3520 5.440234 GTGTATCACACTCTCGATACCAT 57.560 43.478 2.22 0.00 45.27 3.55
2888 3521 4.895224 GTGTATCACACTCTCGATACCA 57.105 45.455 2.22 0.00 45.27 3.25
2899 3532 6.472862 GCTACATGCCGTTGTGTATCACAC 62.473 50.000 1.92 2.48 41.71 3.82
2900 3533 2.177394 ACATGCCGTTGTGTATCACA 57.823 45.000 0.00 0.00 43.02 3.58
2901 3534 2.030457 GCTACATGCCGTTGTGTATCAC 59.970 50.000 0.00 0.00 35.15 3.06
2902 3535 2.276201 GCTACATGCCGTTGTGTATCA 58.724 47.619 0.00 0.00 35.15 2.15
2903 3536 2.276201 TGCTACATGCCGTTGTGTATC 58.724 47.619 0.00 0.00 42.00 2.24
2904 3537 2.394930 TGCTACATGCCGTTGTGTAT 57.605 45.000 0.00 0.00 42.00 2.29
2905 3538 2.171341 TTGCTACATGCCGTTGTGTA 57.829 45.000 0.00 0.00 42.00 2.90
2906 3539 1.199789 CATTGCTACATGCCGTTGTGT 59.800 47.619 0.00 0.00 42.00 3.72
2907 3540 1.468127 TCATTGCTACATGCCGTTGTG 59.532 47.619 0.00 0.00 42.00 3.33
2908 3541 1.819928 TCATTGCTACATGCCGTTGT 58.180 45.000 0.00 0.00 42.00 3.32
2909 3542 4.550577 TTATCATTGCTACATGCCGTTG 57.449 40.909 0.00 0.00 42.00 4.10
2910 3543 5.772825 AATTATCATTGCTACATGCCGTT 57.227 34.783 0.00 0.00 42.00 4.44
2911 3544 5.412594 CCTAATTATCATTGCTACATGCCGT 59.587 40.000 0.00 0.00 42.00 5.68
2912 3545 5.674569 GCCTAATTATCATTGCTACATGCCG 60.675 44.000 0.00 0.00 42.00 5.69
2913 3546 5.183713 TGCCTAATTATCATTGCTACATGCC 59.816 40.000 0.00 0.00 42.00 4.40
2914 3547 6.088824 GTGCCTAATTATCATTGCTACATGC 58.911 40.000 0.00 0.00 43.25 4.06
2915 3548 6.147656 TCGTGCCTAATTATCATTGCTACATG 59.852 38.462 0.00 0.00 0.00 3.21
2916 3549 6.147821 GTCGTGCCTAATTATCATTGCTACAT 59.852 38.462 0.00 0.00 0.00 2.29
2917 3550 5.465390 GTCGTGCCTAATTATCATTGCTACA 59.535 40.000 0.00 0.00 0.00 2.74
2918 3551 5.107065 GGTCGTGCCTAATTATCATTGCTAC 60.107 44.000 0.00 0.00 0.00 3.58
2919 3552 4.994852 GGTCGTGCCTAATTATCATTGCTA 59.005 41.667 0.00 0.00 0.00 3.49
2920 3553 3.815401 GGTCGTGCCTAATTATCATTGCT 59.185 43.478 0.00 0.00 0.00 3.91
2921 3554 3.563808 TGGTCGTGCCTAATTATCATTGC 59.436 43.478 0.00 0.00 38.35 3.56
2922 3555 5.335113 CCATGGTCGTGCCTAATTATCATTG 60.335 44.000 2.57 0.00 38.35 2.82
2923 3556 4.761739 CCATGGTCGTGCCTAATTATCATT 59.238 41.667 2.57 0.00 38.35 2.57
2924 3557 4.326826 CCATGGTCGTGCCTAATTATCAT 58.673 43.478 2.57 0.00 38.35 2.45
2925 3558 3.495983 CCCATGGTCGTGCCTAATTATCA 60.496 47.826 11.73 0.00 38.35 2.15
2926 3559 3.074412 CCCATGGTCGTGCCTAATTATC 58.926 50.000 11.73 0.00 38.35 1.75
2927 3560 2.814097 GCCCATGGTCGTGCCTAATTAT 60.814 50.000 11.73 0.00 38.35 1.28
2928 3561 1.476110 GCCCATGGTCGTGCCTAATTA 60.476 52.381 11.73 0.00 38.35 1.40
2929 3562 0.751643 GCCCATGGTCGTGCCTAATT 60.752 55.000 11.73 0.00 38.35 1.40
2930 3563 1.152963 GCCCATGGTCGTGCCTAAT 60.153 57.895 11.73 0.00 38.35 1.73
2931 3564 2.270850 GCCCATGGTCGTGCCTAA 59.729 61.111 11.73 0.00 38.35 2.69
2932 3565 3.792736 GGCCCATGGTCGTGCCTA 61.793 66.667 19.36 0.00 40.77 3.93
2935 3568 3.443045 CTTGGCCCATGGTCGTGC 61.443 66.667 11.73 6.58 0.00 5.34
2936 3569 3.443045 GCTTGGCCCATGGTCGTG 61.443 66.667 11.73 0.00 0.00 4.35
2937 3570 2.786512 AATGCTTGGCCCATGGTCGT 62.787 55.000 11.73 0.00 0.00 4.34
2938 3571 2.053865 AATGCTTGGCCCATGGTCG 61.054 57.895 11.73 0.00 0.00 4.79
2939 3572 1.518774 CAATGCTTGGCCCATGGTC 59.481 57.895 11.73 0.00 0.00 4.02
2940 3573 1.991167 CCAATGCTTGGCCCATGGT 60.991 57.895 11.73 0.00 45.17 3.55
2941 3574 2.904905 CCAATGCTTGGCCCATGG 59.095 61.111 4.14 4.14 45.17 3.66
2949 3582 3.507233 ACATAACTGGTCACCAATGCTTG 59.493 43.478 6.87 0.32 30.80 4.01
2950 3583 3.766545 ACATAACTGGTCACCAATGCTT 58.233 40.909 6.87 0.00 30.80 3.91
2951 3584 3.439857 ACATAACTGGTCACCAATGCT 57.560 42.857 6.87 0.00 30.80 3.79
2952 3585 4.218417 AGAAACATAACTGGTCACCAATGC 59.782 41.667 6.87 0.00 30.80 3.56
2953 3586 5.964958 AGAAACATAACTGGTCACCAATG 57.035 39.130 0.00 1.09 30.80 2.82
2954 3587 7.942341 TCTTAAGAAACATAACTGGTCACCAAT 59.058 33.333 1.68 0.00 30.80 3.16
2955 3588 7.284074 TCTTAAGAAACATAACTGGTCACCAA 58.716 34.615 1.68 0.00 30.80 3.67
2956 3589 6.833041 TCTTAAGAAACATAACTGGTCACCA 58.167 36.000 1.68 0.00 0.00 4.17
2957 3590 7.227910 TGTTCTTAAGAAACATAACTGGTCACC 59.772 37.037 19.30 2.44 35.58 4.02
2958 3591 8.149973 TGTTCTTAAGAAACATAACTGGTCAC 57.850 34.615 19.30 3.63 35.58 3.67
2959 3592 8.740123 TTGTTCTTAAGAAACATAACTGGTCA 57.260 30.769 19.30 6.12 35.58 4.02
2960 3593 9.052759 TCTTGTTCTTAAGAAACATAACTGGTC 57.947 33.333 19.30 3.64 35.58 4.02
2961 3594 8.974060 TCTTGTTCTTAAGAAACATAACTGGT 57.026 30.769 19.30 0.00 35.58 4.00
2962 3595 9.831737 CATCTTGTTCTTAAGAAACATAACTGG 57.168 33.333 19.30 4.81 39.87 4.00
2968 3601 9.136323 ACCTTTCATCTTGTTCTTAAGAAACAT 57.864 29.630 19.30 6.56 39.87 2.71
2969 3602 8.519799 ACCTTTCATCTTGTTCTTAAGAAACA 57.480 30.769 19.30 15.70 39.87 2.83
2970 3603 9.803315 AAACCTTTCATCTTGTTCTTAAGAAAC 57.197 29.630 19.30 13.54 39.87 2.78
2972 3605 9.184523 TGAAACCTTTCATCTTGTTCTTAAGAA 57.815 29.630 13.99 13.99 41.88 2.52
2973 3606 8.746052 TGAAACCTTTCATCTTGTTCTTAAGA 57.254 30.769 0.00 0.00 41.88 2.10
2974 3607 9.237846 GTTGAAACCTTTCATCTTGTTCTTAAG 57.762 33.333 1.35 0.00 45.65 1.85
2975 3608 8.744652 TGTTGAAACCTTTCATCTTGTTCTTAA 58.255 29.630 1.35 0.00 45.65 1.85
2976 3609 8.188139 GTGTTGAAACCTTTCATCTTGTTCTTA 58.812 33.333 1.35 0.00 45.65 2.10
2977 3610 7.035612 GTGTTGAAACCTTTCATCTTGTTCTT 58.964 34.615 1.35 0.00 45.65 2.52
2978 3611 6.378280 AGTGTTGAAACCTTTCATCTTGTTCT 59.622 34.615 1.35 0.00 45.65 3.01
2979 3612 6.564328 AGTGTTGAAACCTTTCATCTTGTTC 58.436 36.000 1.35 0.00 45.65 3.18
2980 3613 6.530019 AGTGTTGAAACCTTTCATCTTGTT 57.470 33.333 1.35 0.00 45.65 2.83
2981 3614 7.639113 TTAGTGTTGAAACCTTTCATCTTGT 57.361 32.000 1.35 0.00 45.65 3.16
2991 3624 8.515414 GCTCTTCATTATTTAGTGTTGAAACCT 58.485 33.333 0.00 0.00 0.00 3.50
2992 3625 8.296713 TGCTCTTCATTATTTAGTGTTGAAACC 58.703 33.333 0.00 0.00 0.00 3.27
2993 3626 9.334693 CTGCTCTTCATTATTTAGTGTTGAAAC 57.665 33.333 0.00 0.00 0.00 2.78
2994 3627 9.066892 ACTGCTCTTCATTATTTAGTGTTGAAA 57.933 29.630 0.00 0.00 0.00 2.69
2995 3628 8.621532 ACTGCTCTTCATTATTTAGTGTTGAA 57.378 30.769 0.00 0.00 0.00 2.69
2996 3629 8.621532 AACTGCTCTTCATTATTTAGTGTTGA 57.378 30.769 0.00 0.00 0.00 3.18
3017 3650 8.545229 TTTCCCACAATATTTTGCATTAACTG 57.455 30.769 0.00 0.00 36.22 3.16
3018 3651 8.592809 TCTTTCCCACAATATTTTGCATTAACT 58.407 29.630 0.00 0.00 36.22 2.24
3019 3652 8.770438 TCTTTCCCACAATATTTTGCATTAAC 57.230 30.769 0.00 0.00 36.22 2.01
3020 3653 7.548780 GCTCTTTCCCACAATATTTTGCATTAA 59.451 33.333 0.00 0.00 36.22 1.40
3021 3654 7.041107 GCTCTTTCCCACAATATTTTGCATTA 58.959 34.615 0.00 0.00 36.22 1.90
3022 3655 5.876460 GCTCTTTCCCACAATATTTTGCATT 59.124 36.000 0.00 0.00 36.22 3.56
3023 3656 5.422145 GCTCTTTCCCACAATATTTTGCAT 58.578 37.500 0.00 0.00 36.22 3.96
3024 3657 4.322650 GGCTCTTTCCCACAATATTTTGCA 60.323 41.667 0.00 0.00 36.22 4.08
3025 3658 4.183865 GGCTCTTTCCCACAATATTTTGC 58.816 43.478 0.00 0.00 36.22 3.68
3026 3659 5.404466 TGGCTCTTTCCCACAATATTTTG 57.596 39.130 0.00 0.00 38.86 2.44
3027 3660 6.432403 TTTGGCTCTTTCCCACAATATTTT 57.568 33.333 0.00 0.00 30.65 1.82
3028 3661 6.352137 GGATTTGGCTCTTTCCCACAATATTT 60.352 38.462 0.00 0.00 30.65 1.40
3029 3662 5.129320 GGATTTGGCTCTTTCCCACAATATT 59.871 40.000 0.00 0.00 30.65 1.28
3030 3663 4.651045 GGATTTGGCTCTTTCCCACAATAT 59.349 41.667 0.00 0.00 30.65 1.28
3031 3664 4.023291 GGATTTGGCTCTTTCCCACAATA 58.977 43.478 0.00 0.00 30.65 1.90
3032 3665 2.833943 GGATTTGGCTCTTTCCCACAAT 59.166 45.455 0.00 0.00 30.65 2.71
3033 3666 2.247358 GGATTTGGCTCTTTCCCACAA 58.753 47.619 0.00 0.00 30.65 3.33
3034 3667 1.146774 TGGATTTGGCTCTTTCCCACA 59.853 47.619 0.00 0.00 30.65 4.17
3035 3668 1.923356 TGGATTTGGCTCTTTCCCAC 58.077 50.000 0.00 0.00 30.65 4.61
3036 3669 2.528564 CTTGGATTTGGCTCTTTCCCA 58.471 47.619 0.00 0.00 0.00 4.37
3037 3670 1.205655 GCTTGGATTTGGCTCTTTCCC 59.794 52.381 0.00 0.00 0.00 3.97
3038 3671 1.895131 TGCTTGGATTTGGCTCTTTCC 59.105 47.619 0.00 0.00 0.00 3.13
3039 3672 2.297033 TGTGCTTGGATTTGGCTCTTTC 59.703 45.455 0.00 0.00 0.00 2.62
3040 3673 2.318908 TGTGCTTGGATTTGGCTCTTT 58.681 42.857 0.00 0.00 0.00 2.52
3041 3674 1.999648 TGTGCTTGGATTTGGCTCTT 58.000 45.000 0.00 0.00 0.00 2.85
3042 3675 1.999648 TTGTGCTTGGATTTGGCTCT 58.000 45.000 0.00 0.00 0.00 4.09
3043 3676 2.802247 GTTTTGTGCTTGGATTTGGCTC 59.198 45.455 0.00 0.00 0.00 4.70
3044 3677 2.170187 TGTTTTGTGCTTGGATTTGGCT 59.830 40.909 0.00 0.00 0.00 4.75
3045 3678 2.287644 GTGTTTTGTGCTTGGATTTGGC 59.712 45.455 0.00 0.00 0.00 4.52
3046 3679 3.795877 AGTGTTTTGTGCTTGGATTTGG 58.204 40.909 0.00 0.00 0.00 3.28
3047 3680 7.224362 TCAATAAGTGTTTTGTGCTTGGATTTG 59.776 33.333 0.00 0.00 0.00 2.32
3048 3681 7.271511 TCAATAAGTGTTTTGTGCTTGGATTT 58.728 30.769 0.00 0.00 0.00 2.17
3049 3682 6.815089 TCAATAAGTGTTTTGTGCTTGGATT 58.185 32.000 0.00 0.00 0.00 3.01
3050 3683 6.403866 TCAATAAGTGTTTTGTGCTTGGAT 57.596 33.333 0.00 0.00 0.00 3.41
3051 3684 5.843673 TCAATAAGTGTTTTGTGCTTGGA 57.156 34.783 0.00 0.00 0.00 3.53
3052 3685 8.246180 AGATATCAATAAGTGTTTTGTGCTTGG 58.754 33.333 5.32 0.00 0.00 3.61
3053 3686 9.282247 GAGATATCAATAAGTGTTTTGTGCTTG 57.718 33.333 5.32 0.00 0.00 4.01
3054 3687 9.013229 TGAGATATCAATAAGTGTTTTGTGCTT 57.987 29.630 5.32 0.00 0.00 3.91
3055 3688 8.454106 GTGAGATATCAATAAGTGTTTTGTGCT 58.546 33.333 5.32 0.00 0.00 4.40
3056 3689 8.236586 TGTGAGATATCAATAAGTGTTTTGTGC 58.763 33.333 5.32 0.00 0.00 4.57
3057 3690 9.546909 GTGTGAGATATCAATAAGTGTTTTGTG 57.453 33.333 5.32 0.00 0.00 3.33
3058 3691 9.283768 TGTGTGAGATATCAATAAGTGTTTTGT 57.716 29.630 5.32 0.00 0.00 2.83
3059 3692 9.546909 GTGTGTGAGATATCAATAAGTGTTTTG 57.453 33.333 5.32 0.00 0.00 2.44
3060 3693 9.507329 AGTGTGTGAGATATCAATAAGTGTTTT 57.493 29.630 5.32 0.00 0.00 2.43
3062 3695 9.587772 GTAGTGTGTGAGATATCAATAAGTGTT 57.412 33.333 5.32 0.00 0.00 3.32
3063 3696 7.915923 CGTAGTGTGTGAGATATCAATAAGTGT 59.084 37.037 5.32 0.00 0.00 3.55
3064 3697 7.379797 CCGTAGTGTGTGAGATATCAATAAGTG 59.620 40.741 5.32 0.00 0.00 3.16
3065 3698 7.284716 TCCGTAGTGTGTGAGATATCAATAAGT 59.715 37.037 5.32 0.00 0.00 2.24
3066 3699 7.649057 TCCGTAGTGTGTGAGATATCAATAAG 58.351 38.462 5.32 0.00 0.00 1.73
3067 3700 7.576861 TCCGTAGTGTGTGAGATATCAATAA 57.423 36.000 5.32 0.00 0.00 1.40
3068 3701 7.761038 ATCCGTAGTGTGTGAGATATCAATA 57.239 36.000 5.32 0.00 0.00 1.90
3069 3702 6.656632 ATCCGTAGTGTGTGAGATATCAAT 57.343 37.500 5.32 0.00 0.00 2.57
3070 3703 6.465439 AATCCGTAGTGTGTGAGATATCAA 57.535 37.500 5.32 0.00 0.00 2.57
3071 3704 6.465439 AAATCCGTAGTGTGTGAGATATCA 57.535 37.500 5.32 0.00 0.00 2.15
3075 3708 9.909644 GTAATATAAATCCGTAGTGTGTGAGAT 57.090 33.333 0.00 0.00 0.00 2.75
3076 3709 9.128404 AGTAATATAAATCCGTAGTGTGTGAGA 57.872 33.333 0.00 0.00 0.00 3.27
3077 3710 9.181805 CAGTAATATAAATCCGTAGTGTGTGAG 57.818 37.037 0.00 0.00 0.00 3.51
3078 3711 8.905850 TCAGTAATATAAATCCGTAGTGTGTGA 58.094 33.333 0.00 0.00 0.00 3.58
3079 3712 9.181805 CTCAGTAATATAAATCCGTAGTGTGTG 57.818 37.037 0.00 0.00 0.00 3.82
3080 3713 8.910944 ACTCAGTAATATAAATCCGTAGTGTGT 58.089 33.333 0.00 0.00 0.00 3.72
3081 3714 9.181805 CACTCAGTAATATAAATCCGTAGTGTG 57.818 37.037 0.00 0.00 0.00 3.82
3082 3715 8.910944 ACACTCAGTAATATAAATCCGTAGTGT 58.089 33.333 0.00 0.00 38.19 3.55
3083 3716 9.745880 AACACTCAGTAATATAAATCCGTAGTG 57.254 33.333 0.00 0.00 36.43 2.74
3096 3729 9.472361 GTTGTTCAGTTCTAACACTCAGTAATA 57.528 33.333 0.00 0.00 36.61 0.98
3097 3730 7.441458 GGTTGTTCAGTTCTAACACTCAGTAAT 59.559 37.037 0.00 0.00 36.61 1.89
3098 3731 6.759827 GGTTGTTCAGTTCTAACACTCAGTAA 59.240 38.462 0.00 0.00 36.61 2.24
3099 3732 6.097839 AGGTTGTTCAGTTCTAACACTCAGTA 59.902 38.462 0.00 0.00 36.61 2.74
3100 3733 5.104900 AGGTTGTTCAGTTCTAACACTCAGT 60.105 40.000 0.00 0.00 36.61 3.41
3101 3734 5.360591 AGGTTGTTCAGTTCTAACACTCAG 58.639 41.667 0.00 0.00 36.61 3.35
3102 3735 5.353394 AGGTTGTTCAGTTCTAACACTCA 57.647 39.130 0.00 0.00 36.61 3.41
3103 3736 5.405873 GCTAGGTTGTTCAGTTCTAACACTC 59.594 44.000 0.00 0.00 36.61 3.51
3104 3737 5.163343 TGCTAGGTTGTTCAGTTCTAACACT 60.163 40.000 0.00 0.00 36.61 3.55
3105 3738 5.054477 TGCTAGGTTGTTCAGTTCTAACAC 58.946 41.667 0.00 0.00 36.61 3.32
3106 3739 5.284861 TGCTAGGTTGTTCAGTTCTAACA 57.715 39.130 0.00 0.00 35.12 2.41
3107 3740 5.334182 GCTTGCTAGGTTGTTCAGTTCTAAC 60.334 44.000 0.00 0.00 0.00 2.34
3108 3741 4.755123 GCTTGCTAGGTTGTTCAGTTCTAA 59.245 41.667 0.00 0.00 0.00 2.10
3109 3742 4.202315 TGCTTGCTAGGTTGTTCAGTTCTA 60.202 41.667 0.00 0.00 0.00 2.10
3110 3743 3.142174 GCTTGCTAGGTTGTTCAGTTCT 58.858 45.455 0.00 0.00 0.00 3.01
3111 3744 2.878406 TGCTTGCTAGGTTGTTCAGTTC 59.122 45.455 0.00 0.00 0.00 3.01
3112 3745 2.880890 CTGCTTGCTAGGTTGTTCAGTT 59.119 45.455 0.00 0.00 0.00 3.16
3113 3746 2.104792 TCTGCTTGCTAGGTTGTTCAGT 59.895 45.455 0.00 0.00 0.00 3.41
3114 3747 2.740981 CTCTGCTTGCTAGGTTGTTCAG 59.259 50.000 0.00 0.00 0.00 3.02
3115 3748 2.104792 ACTCTGCTTGCTAGGTTGTTCA 59.895 45.455 0.00 0.00 0.00 3.18
3116 3749 2.772287 ACTCTGCTTGCTAGGTTGTTC 58.228 47.619 0.00 0.00 0.00 3.18
3117 3750 2.938956 ACTCTGCTTGCTAGGTTGTT 57.061 45.000 0.00 0.00 0.00 2.83
3118 3751 4.712337 ACTATACTCTGCTTGCTAGGTTGT 59.288 41.667 0.00 0.00 0.00 3.32
3119 3752 5.269505 ACTATACTCTGCTTGCTAGGTTG 57.730 43.478 0.00 0.00 0.00 3.77
3120 3753 6.366340 TCTACTATACTCTGCTTGCTAGGTT 58.634 40.000 0.00 0.00 0.00 3.50
3121 3754 5.942961 TCTACTATACTCTGCTTGCTAGGT 58.057 41.667 0.00 0.00 0.00 3.08
3122 3755 6.885952 TTCTACTATACTCTGCTTGCTAGG 57.114 41.667 0.00 0.00 0.00 3.02
3123 3756 7.860373 CAGTTTCTACTATACTCTGCTTGCTAG 59.140 40.741 0.00 0.00 31.96 3.42
3124 3757 7.556635 TCAGTTTCTACTATACTCTGCTTGCTA 59.443 37.037 0.00 0.00 31.96 3.49
3125 3758 6.378564 TCAGTTTCTACTATACTCTGCTTGCT 59.621 38.462 0.00 0.00 31.96 3.91
3126 3759 6.565234 TCAGTTTCTACTATACTCTGCTTGC 58.435 40.000 0.00 0.00 31.96 4.01
3127 3760 8.988064 TTTCAGTTTCTACTATACTCTGCTTG 57.012 34.615 0.00 0.00 31.96 4.01
3128 3761 9.026121 TCTTTCAGTTTCTACTATACTCTGCTT 57.974 33.333 0.00 0.00 31.96 3.91
3129 3762 8.582657 TCTTTCAGTTTCTACTATACTCTGCT 57.417 34.615 0.00 0.00 31.96 4.24
3130 3763 8.463607 ACTCTTTCAGTTTCTACTATACTCTGC 58.536 37.037 0.00 0.00 31.96 4.26
3137 3770 9.425577 GCAAGTTACTCTTTCAGTTTCTACTAT 57.574 33.333 0.00 0.00 36.43 2.12
3138 3771 8.418662 TGCAAGTTACTCTTTCAGTTTCTACTA 58.581 33.333 0.00 0.00 36.43 1.82
3139 3772 7.272978 TGCAAGTTACTCTTTCAGTTTCTACT 58.727 34.615 0.00 0.00 36.43 2.57
3140 3773 7.478520 TGCAAGTTACTCTTTCAGTTTCTAC 57.521 36.000 0.00 0.00 36.43 2.59
3141 3774 7.226720 CCTTGCAAGTTACTCTTTCAGTTTCTA 59.773 37.037 24.35 0.00 36.43 2.10
3142 3775 6.038714 CCTTGCAAGTTACTCTTTCAGTTTCT 59.961 38.462 24.35 0.00 36.43 2.52
3143 3776 6.038271 TCCTTGCAAGTTACTCTTTCAGTTTC 59.962 38.462 24.35 0.00 36.43 2.78
3144 3777 5.885912 TCCTTGCAAGTTACTCTTTCAGTTT 59.114 36.000 24.35 0.00 36.43 2.66
3145 3778 5.437060 TCCTTGCAAGTTACTCTTTCAGTT 58.563 37.500 24.35 0.00 36.43 3.16
3146 3779 5.036117 TCCTTGCAAGTTACTCTTTCAGT 57.964 39.130 24.35 0.00 39.41 3.41
3147 3780 6.566197 AATCCTTGCAAGTTACTCTTTCAG 57.434 37.500 24.35 5.25 31.73 3.02
3148 3781 7.450074 TCTAATCCTTGCAAGTTACTCTTTCA 58.550 34.615 24.35 0.00 33.63 2.69
3149 3782 7.819900 TCTCTAATCCTTGCAAGTTACTCTTTC 59.180 37.037 24.35 0.00 33.63 2.62
3150 3783 7.680730 TCTCTAATCCTTGCAAGTTACTCTTT 58.319 34.615 24.35 9.54 33.63 2.52
3151 3784 7.246171 TCTCTAATCCTTGCAAGTTACTCTT 57.754 36.000 24.35 10.61 36.75 2.85
3152 3785 6.859112 TCTCTAATCCTTGCAAGTTACTCT 57.141 37.500 24.35 5.93 0.00 3.24
3153 3786 9.036671 GTATTCTCTAATCCTTGCAAGTTACTC 57.963 37.037 24.35 0.00 0.00 2.59
3154 3787 8.540388 TGTATTCTCTAATCCTTGCAAGTTACT 58.460 33.333 24.35 8.93 0.00 2.24
3155 3788 8.718102 TGTATTCTCTAATCCTTGCAAGTTAC 57.282 34.615 24.35 7.49 0.00 2.50
3156 3789 9.733556 TTTGTATTCTCTAATCCTTGCAAGTTA 57.266 29.630 24.35 15.73 0.00 2.24
3157 3790 8.515414 GTTTGTATTCTCTAATCCTTGCAAGTT 58.485 33.333 24.35 15.44 0.00 2.66
3158 3791 7.665559 TGTTTGTATTCTCTAATCCTTGCAAGT 59.334 33.333 24.35 9.39 0.00 3.16
3159 3792 7.965107 GTGTTTGTATTCTCTAATCCTTGCAAG 59.035 37.037 19.93 19.93 0.00 4.01
3160 3793 7.446931 TGTGTTTGTATTCTCTAATCCTTGCAA 59.553 33.333 0.00 0.00 0.00 4.08
3161 3794 6.939730 TGTGTTTGTATTCTCTAATCCTTGCA 59.060 34.615 0.00 0.00 0.00 4.08
3162 3795 7.377766 TGTGTTTGTATTCTCTAATCCTTGC 57.622 36.000 0.00 0.00 0.00 4.01
3163 3796 9.778993 CAATGTGTTTGTATTCTCTAATCCTTG 57.221 33.333 0.00 0.00 0.00 3.61
3164 3797 8.960591 CCAATGTGTTTGTATTCTCTAATCCTT 58.039 33.333 0.00 0.00 33.15 3.36
3165 3798 8.328758 TCCAATGTGTTTGTATTCTCTAATCCT 58.671 33.333 0.00 0.00 33.15 3.24
3166 3799 8.398665 GTCCAATGTGTTTGTATTCTCTAATCC 58.601 37.037 0.00 0.00 33.15 3.01
3167 3800 8.946085 TGTCCAATGTGTTTGTATTCTCTAATC 58.054 33.333 0.00 0.00 33.15 1.75
3168 3801 8.730680 GTGTCCAATGTGTTTGTATTCTCTAAT 58.269 33.333 0.00 0.00 33.15 1.73
3169 3802 7.095397 CGTGTCCAATGTGTTTGTATTCTCTAA 60.095 37.037 0.00 0.00 33.15 2.10
3170 3803 6.367695 CGTGTCCAATGTGTTTGTATTCTCTA 59.632 38.462 0.00 0.00 33.15 2.43
3171 3804 5.179368 CGTGTCCAATGTGTTTGTATTCTCT 59.821 40.000 0.00 0.00 33.15 3.10
3172 3805 5.178623 TCGTGTCCAATGTGTTTGTATTCTC 59.821 40.000 0.00 0.00 33.15 2.87
3173 3806 5.060506 TCGTGTCCAATGTGTTTGTATTCT 58.939 37.500 0.00 0.00 33.15 2.40
3174 3807 5.351233 TCGTGTCCAATGTGTTTGTATTC 57.649 39.130 0.00 0.00 33.15 1.75
3175 3808 5.471797 TCATCGTGTCCAATGTGTTTGTATT 59.528 36.000 0.00 0.00 33.15 1.89
3176 3809 5.000591 TCATCGTGTCCAATGTGTTTGTAT 58.999 37.500 0.00 0.00 33.15 2.29
3177 3810 4.381411 TCATCGTGTCCAATGTGTTTGTA 58.619 39.130 0.00 0.00 33.15 2.41
3178 3811 3.210227 TCATCGTGTCCAATGTGTTTGT 58.790 40.909 0.00 0.00 33.15 2.83
3179 3812 3.894782 TCATCGTGTCCAATGTGTTTG 57.105 42.857 0.00 0.00 34.93 2.93
3180 3813 5.452078 AAATCATCGTGTCCAATGTGTTT 57.548 34.783 0.00 0.00 0.00 2.83
3181 3814 5.452078 AAAATCATCGTGTCCAATGTGTT 57.548 34.783 0.00 0.00 0.00 3.32
3182 3815 4.082787 GGAAAATCATCGTGTCCAATGTGT 60.083 41.667 0.00 0.00 0.00 3.72
3183 3816 4.414852 GGAAAATCATCGTGTCCAATGTG 58.585 43.478 0.00 0.00 0.00 3.21
3184 3817 3.126858 CGGAAAATCATCGTGTCCAATGT 59.873 43.478 0.00 0.00 0.00 2.71
3185 3818 3.487376 CCGGAAAATCATCGTGTCCAATG 60.487 47.826 0.00 0.00 0.00 2.82
3186 3819 2.682856 CCGGAAAATCATCGTGTCCAAT 59.317 45.455 0.00 0.00 0.00 3.16
3187 3820 2.080693 CCGGAAAATCATCGTGTCCAA 58.919 47.619 0.00 0.00 0.00 3.53
3188 3821 1.002659 ACCGGAAAATCATCGTGTCCA 59.997 47.619 9.46 0.00 0.00 4.02
3189 3822 1.396996 CACCGGAAAATCATCGTGTCC 59.603 52.381 9.46 0.00 0.00 4.02
3190 3823 2.343101 TCACCGGAAAATCATCGTGTC 58.657 47.619 9.46 0.00 0.00 3.67
3191 3824 2.465860 TCACCGGAAAATCATCGTGT 57.534 45.000 9.46 0.00 0.00 4.49
3192 3825 3.544048 CGAATCACCGGAAAATCATCGTG 60.544 47.826 9.46 0.00 0.00 4.35
3193 3826 2.607635 CGAATCACCGGAAAATCATCGT 59.392 45.455 9.46 0.00 0.00 3.73
3194 3827 3.238903 CGAATCACCGGAAAATCATCG 57.761 47.619 9.46 4.87 0.00 3.84
3205 3838 1.217882 GCCAACTATCCGAATCACCG 58.782 55.000 0.00 0.00 0.00 4.94
3206 3839 1.202486 TCGCCAACTATCCGAATCACC 60.202 52.381 0.00 0.00 0.00 4.02
3207 3840 2.218953 TCGCCAACTATCCGAATCAC 57.781 50.000 0.00 0.00 0.00 3.06
3208 3841 2.102420 ACATCGCCAACTATCCGAATCA 59.898 45.455 0.00 0.00 34.42 2.57
3209 3842 2.731976 GACATCGCCAACTATCCGAATC 59.268 50.000 0.00 0.00 34.42 2.52
3210 3843 2.365617 AGACATCGCCAACTATCCGAAT 59.634 45.455 0.00 0.00 34.42 3.34
3211 3844 1.754803 AGACATCGCCAACTATCCGAA 59.245 47.619 0.00 0.00 34.42 4.30
3212 3845 1.399714 AGACATCGCCAACTATCCGA 58.600 50.000 0.00 0.00 35.29 4.55
3213 3846 2.293677 AGTAGACATCGCCAACTATCCG 59.706 50.000 0.00 0.00 0.00 4.18
3214 3847 3.305471 GGAGTAGACATCGCCAACTATCC 60.305 52.174 0.00 0.00 0.00 2.59
3215 3848 3.318275 TGGAGTAGACATCGCCAACTATC 59.682 47.826 0.00 0.00 32.31 2.08
3216 3849 3.068307 GTGGAGTAGACATCGCCAACTAT 59.932 47.826 0.00 0.00 36.61 2.12
3217 3850 2.426024 GTGGAGTAGACATCGCCAACTA 59.574 50.000 0.00 0.00 36.61 2.24
3218 3851 1.204941 GTGGAGTAGACATCGCCAACT 59.795 52.381 0.00 0.00 36.61 3.16
3219 3852 1.641577 GTGGAGTAGACATCGCCAAC 58.358 55.000 0.00 0.00 36.61 3.77
3220 3853 0.172578 CGTGGAGTAGACATCGCCAA 59.827 55.000 0.00 0.00 36.61 4.52
3221 3854 0.963856 ACGTGGAGTAGACATCGCCA 60.964 55.000 0.00 0.00 32.77 5.69
3222 3855 0.172803 AACGTGGAGTAGACATCGCC 59.827 55.000 0.00 0.00 0.00 5.54
3223 3856 1.135489 TCAACGTGGAGTAGACATCGC 60.135 52.381 0.00 0.00 0.00 4.58
3224 3857 2.913777 TCAACGTGGAGTAGACATCG 57.086 50.000 0.00 0.00 0.00 3.84
3225 3858 3.130516 TCCATCAACGTGGAGTAGACATC 59.869 47.826 0.00 0.00 43.20 3.06
3226 3859 3.096852 TCCATCAACGTGGAGTAGACAT 58.903 45.455 0.00 0.00 43.20 3.06
3227 3860 2.521126 TCCATCAACGTGGAGTAGACA 58.479 47.619 0.00 0.00 43.20 3.41
3234 3867 2.367241 TCAAAGACTCCATCAACGTGGA 59.633 45.455 0.00 0.00 45.78 4.02
3235 3868 2.766313 TCAAAGACTCCATCAACGTGG 58.234 47.619 0.00 0.00 40.76 4.94
3236 3869 4.811555 TTTCAAAGACTCCATCAACGTG 57.188 40.909 0.00 0.00 0.00 4.49
3237 3870 5.828299 TTTTTCAAAGACTCCATCAACGT 57.172 34.783 0.00 0.00 0.00 3.99
3257 3890 7.771927 ATCCTTGTGATCTTGAGACATTTTT 57.228 32.000 0.00 0.00 0.00 1.94
3258 3891 7.388460 GATCCTTGTGATCTTGAGACATTTT 57.612 36.000 0.00 0.00 45.46 1.82
3259 3892 6.998968 GATCCTTGTGATCTTGAGACATTT 57.001 37.500 0.00 0.00 45.46 2.32
3271 3904 1.134580 CGCACTCCAGATCCTTGTGAT 60.135 52.381 9.09 0.00 36.01 3.06
3272 3905 0.247460 CGCACTCCAGATCCTTGTGA 59.753 55.000 9.09 0.00 0.00 3.58
3273 3906 0.036952 ACGCACTCCAGATCCTTGTG 60.037 55.000 0.00 0.00 0.00 3.33
3274 3907 0.247736 GACGCACTCCAGATCCTTGT 59.752 55.000 0.00 0.00 0.00 3.16
3275 3908 0.247460 TGACGCACTCCAGATCCTTG 59.753 55.000 0.00 0.00 0.00 3.61
3276 3909 0.247736 GTGACGCACTCCAGATCCTT 59.752 55.000 3.20 0.00 0.00 3.36
3277 3910 1.608717 GGTGACGCACTCCAGATCCT 61.609 60.000 9.31 0.00 34.40 3.24
3278 3911 1.153549 GGTGACGCACTCCAGATCC 60.154 63.158 9.31 0.00 34.40 3.36
3279 3912 0.037326 TTGGTGACGCACTCCAGATC 60.037 55.000 9.31 0.00 42.07 2.75
3280 3913 0.615331 ATTGGTGACGCACTCCAGAT 59.385 50.000 9.31 3.10 42.07 2.90
3281 3914 0.037326 GATTGGTGACGCACTCCAGA 60.037 55.000 9.31 1.32 42.07 3.86
3282 3915 0.320683 TGATTGGTGACGCACTCCAG 60.321 55.000 9.31 0.00 42.07 3.86
3283 3916 0.107643 TTGATTGGTGACGCACTCCA 59.892 50.000 9.31 5.20 39.91 3.86
3284 3917 0.798776 CTTGATTGGTGACGCACTCC 59.201 55.000 9.31 2.86 34.40 3.85
3285 3918 1.461127 GACTTGATTGGTGACGCACTC 59.539 52.381 9.31 1.76 34.40 3.51
3286 3919 1.202639 TGACTTGATTGGTGACGCACT 60.203 47.619 9.31 0.00 34.40 4.40
3287 3920 1.225855 TGACTTGATTGGTGACGCAC 58.774 50.000 1.92 1.92 0.00 5.34
3288 3921 1.601903 GTTGACTTGATTGGTGACGCA 59.398 47.619 0.00 0.00 0.00 5.24
3289 3922 1.069227 GGTTGACTTGATTGGTGACGC 60.069 52.381 0.00 0.00 0.00 5.19
3290 3923 2.494059 AGGTTGACTTGATTGGTGACG 58.506 47.619 0.00 0.00 0.00 4.35
3291 3924 6.653320 TGTAATAGGTTGACTTGATTGGTGAC 59.347 38.462 0.00 0.00 0.00 3.67
3292 3925 6.774673 TGTAATAGGTTGACTTGATTGGTGA 58.225 36.000 0.00 0.00 0.00 4.02
3293 3926 7.336679 TGATGTAATAGGTTGACTTGATTGGTG 59.663 37.037 0.00 0.00 0.00 4.17
3294 3927 7.402054 TGATGTAATAGGTTGACTTGATTGGT 58.598 34.615 0.00 0.00 0.00 3.67
3295 3928 7.864108 TGATGTAATAGGTTGACTTGATTGG 57.136 36.000 0.00 0.00 0.00 3.16
3296 3929 8.347771 CCATGATGTAATAGGTTGACTTGATTG 58.652 37.037 0.00 0.00 0.00 2.67
3297 3930 8.055181 ACCATGATGTAATAGGTTGACTTGATT 58.945 33.333 0.00 0.00 0.00 2.57
3298 3931 7.577303 ACCATGATGTAATAGGTTGACTTGAT 58.423 34.615 0.00 0.00 0.00 2.57
3299 3932 6.957631 ACCATGATGTAATAGGTTGACTTGA 58.042 36.000 0.00 0.00 0.00 3.02
3300 3933 7.630242 AACCATGATGTAATAGGTTGACTTG 57.370 36.000 0.00 0.00 40.80 3.16
3301 3934 7.362920 GCAAACCATGATGTAATAGGTTGACTT 60.363 37.037 0.00 0.00 41.43 3.01
3302 3935 6.095440 GCAAACCATGATGTAATAGGTTGACT 59.905 38.462 0.00 0.00 41.43 3.41
3303 3936 6.127758 TGCAAACCATGATGTAATAGGTTGAC 60.128 38.462 0.00 0.00 41.43 3.18
3304 3937 5.948758 TGCAAACCATGATGTAATAGGTTGA 59.051 36.000 0.00 0.00 41.43 3.18
3305 3938 6.035843 GTGCAAACCATGATGTAATAGGTTG 58.964 40.000 0.00 0.00 41.43 3.77
3306 3939 5.127031 GGTGCAAACCATGATGTAATAGGTT 59.873 40.000 0.00 0.00 43.96 3.50
3307 3940 4.644685 GGTGCAAACCATGATGTAATAGGT 59.355 41.667 0.00 0.00 0.00 3.08
3308 3941 4.644234 TGGTGCAAACCATGATGTAATAGG 59.356 41.667 0.00 0.00 34.33 2.57
3309 3942 5.833406 TGGTGCAAACCATGATGTAATAG 57.167 39.130 0.00 0.00 34.33 1.73
3310 3943 5.948758 TCTTGGTGCAAACCATGATGTAATA 59.051 36.000 8.87 0.00 38.51 0.98
3311 3944 4.771577 TCTTGGTGCAAACCATGATGTAAT 59.228 37.500 8.87 0.00 38.51 1.89
3312 3945 4.148079 TCTTGGTGCAAACCATGATGTAA 58.852 39.130 8.87 0.00 38.51 2.41
3313 3946 3.760738 TCTTGGTGCAAACCATGATGTA 58.239 40.909 8.87 0.00 38.51 2.29
3314 3947 2.596346 TCTTGGTGCAAACCATGATGT 58.404 42.857 8.87 0.00 38.51 3.06
3315 3948 3.581755 CTTCTTGGTGCAAACCATGATG 58.418 45.455 12.61 11.38 41.56 3.07
3316 3949 2.028748 GCTTCTTGGTGCAAACCATGAT 60.029 45.455 12.61 0.00 41.56 2.45
3317 3950 1.340889 GCTTCTTGGTGCAAACCATGA 59.659 47.619 8.87 8.87 40.68 3.07
3318 3951 1.606224 GGCTTCTTGGTGCAAACCATG 60.606 52.381 0.00 1.55 39.86 3.66
3319 3952 0.681175 GGCTTCTTGGTGCAAACCAT 59.319 50.000 0.00 0.00 39.86 3.55
3320 3953 2.123409 GGCTTCTTGGTGCAAACCA 58.877 52.632 0.00 0.00 38.14 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.