Multiple sequence alignment - TraesCS3A01G476900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G476900 chr3A 100.000 6732 0 0 1 6732 708825028 708818297 0.000000e+00 12432.0
1 TraesCS3A01G476900 chr3A 99.005 201 2 0 6532 6732 708811697 708811497 1.780000e-95 361.0
2 TraesCS3A01G476900 chr3A 85.503 338 21 10 3421 3757 708653556 708653866 1.810000e-85 327.0
3 TraesCS3A01G476900 chr3D 95.123 4839 166 41 914 5729 573769856 573765065 0.000000e+00 7564.0
4 TraesCS3A01G476900 chr3D 89.130 368 36 4 1 366 573804829 573804464 7.960000e-124 455.0
5 TraesCS3A01G476900 chr3D 79.794 678 89 20 460 1103 573807634 573806971 3.700000e-122 449.0
6 TraesCS3A01G476900 chr3D 88.889 270 29 1 1820 2089 573815215 573814947 1.400000e-86 331.0
7 TraesCS3A01G476900 chr3D 87.435 191 16 3 1 183 573811428 573811238 5.290000e-51 213.0
8 TraesCS3A01G476900 chr3D 88.811 143 12 1 228 366 573811236 573811094 8.980000e-39 172.0
9 TraesCS3A01G476900 chr3D 81.865 193 16 13 728 910 573770072 573769889 1.960000e-30 145.0
10 TraesCS3A01G476900 chr3D 85.437 103 10 3 5822 5919 573764909 573764807 1.190000e-17 102.0
11 TraesCS3A01G476900 chr3B 94.106 3970 177 22 2085 6027 763341662 763345601 0.000000e+00 5982.0
12 TraesCS3A01G476900 chr3B 84.873 1494 142 39 6 1483 763339678 763341103 0.000000e+00 1430.0
13 TraesCS3A01G476900 chr3B 84.434 893 109 18 4756 5643 763457175 763458042 0.000000e+00 852.0
14 TraesCS3A01G476900 chr3B 81.607 946 109 34 4203 5110 395839923 395839005 0.000000e+00 723.0
15 TraesCS3A01G476900 chr3B 81.415 947 109 36 4203 5110 755045284 755044366 0.000000e+00 712.0
16 TraesCS3A01G476900 chr3B 78.853 889 96 36 236 1089 763306609 763307440 3.600000e-142 516.0
17 TraesCS3A01G476900 chr3B 84.266 572 43 16 1527 2094 763341109 763341637 1.290000e-141 514.0
18 TraesCS3A01G476900 chr3B 92.720 261 13 3 6078 6334 763345730 763345988 8.250000e-99 372.0
19 TraesCS3A01G476900 chr3B 84.308 325 22 8 3434 3757 763611977 763611681 2.380000e-74 291.0
20 TraesCS3A01G476900 chr3B 89.759 166 14 3 1 164 763298232 763298396 6.840000e-50 209.0
21 TraesCS3A01G476900 chr4B 85.404 1014 133 14 3005 4016 129053213 129054213 0.000000e+00 1038.0
22 TraesCS3A01G476900 chr2A 85.460 1011 131 14 3005 4014 218212971 218211976 0.000000e+00 1038.0
23 TraesCS3A01G476900 chr2A 97.512 201 2 2 6532 6732 776426480 776426283 2.330000e-89 340.0
24 TraesCS3A01G476900 chr2A 91.176 68 6 0 6464 6531 583841337 583841270 7.190000e-15 93.5
25 TraesCS3A01G476900 chr6B 82.694 1017 133 22 3005 4016 534189443 534188465 0.000000e+00 863.0
26 TraesCS3A01G476900 chr6B 82.662 571 65 16 4153 4692 675196474 675195907 6.110000e-130 475.0
27 TraesCS3A01G476900 chr6B 100.000 41 0 0 6464 6504 450607065 450607105 7.240000e-10 76.8
28 TraesCS3A01G476900 chr1D 83.070 951 96 37 4203 5110 386378331 386377403 0.000000e+00 804.0
29 TraesCS3A01G476900 chr1D 91.176 68 6 0 6464 6531 336374152 336374085 7.190000e-15 93.5
30 TraesCS3A01G476900 chr6D 82.650 951 102 36 4203 5110 86934415 86935345 0.000000e+00 784.0
31 TraesCS3A01G476900 chr6D 93.137 102 6 1 5747 5847 2392999 2392898 1.510000e-31 148.0
32 TraesCS3A01G476900 chr6A 82.715 943 103 35 4207 5110 369412481 369411560 0.000000e+00 784.0
33 TraesCS3A01G476900 chr6A 96.809 94 2 1 5746 5838 563554319 563554412 9.040000e-34 156.0
34 TraesCS3A01G476900 chr5B 80.652 951 116 35 4203 5110 195738451 195739376 0.000000e+00 675.0
35 TraesCS3A01G476900 chr5B 94.340 106 4 2 5749 5854 45261635 45261738 1.940000e-35 161.0
36 TraesCS3A01G476900 chrUn 86.800 250 25 4 1624 1872 287142258 287142016 8.600000e-69 272.0
37 TraesCS3A01G476900 chrUn 86.800 250 25 4 1624 1872 287148426 287148184 8.600000e-69 272.0
38 TraesCS3A01G476900 chrUn 86.800 250 25 4 1624 1872 293604539 293604781 8.600000e-69 272.0
39 TraesCS3A01G476900 chr4D 97.778 90 2 0 5749 5838 16403452 16403541 9.040000e-34 156.0
40 TraesCS3A01G476900 chr4D 94.898 98 5 0 5738 5835 98447956 98448053 3.250000e-33 154.0
41 TraesCS3A01G476900 chr4D 91.818 110 8 1 5730 5838 164884031 164884140 1.170000e-32 152.0
42 TraesCS3A01G476900 chr2D 94.118 102 5 1 5747 5847 441039187 441039086 3.250000e-33 154.0
43 TraesCS3A01G476900 chr2D 94.118 102 5 1 5747 5847 638464737 638464838 3.250000e-33 154.0
44 TraesCS3A01G476900 chr2B 96.739 92 3 0 5746 5837 162544298 162544207 3.250000e-33 154.0
45 TraesCS3A01G476900 chr4A 96.296 54 2 0 2829 2882 225329238 225329185 9.300000e-14 89.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G476900 chr3A 708818297 708825028 6731 True 12432.000000 12432 100.00000 1 6732 1 chr3A.!!$R2 6731
1 TraesCS3A01G476900 chr3D 573764807 573770072 5265 True 2603.666667 7564 87.47500 728 5919 3 chr3D.!!$R1 5191
2 TraesCS3A01G476900 chr3D 573804464 573815215 10751 True 324.000000 455 86.81180 1 2089 5 chr3D.!!$R2 2088
3 TraesCS3A01G476900 chr3B 763339678 763345988 6310 False 2074.500000 5982 88.99125 6 6334 4 chr3B.!!$F4 6328
4 TraesCS3A01G476900 chr3B 763457175 763458042 867 False 852.000000 852 84.43400 4756 5643 1 chr3B.!!$F3 887
5 TraesCS3A01G476900 chr3B 395839005 395839923 918 True 723.000000 723 81.60700 4203 5110 1 chr3B.!!$R1 907
6 TraesCS3A01G476900 chr3B 755044366 755045284 918 True 712.000000 712 81.41500 4203 5110 1 chr3B.!!$R2 907
7 TraesCS3A01G476900 chr3B 763306609 763307440 831 False 516.000000 516 78.85300 236 1089 1 chr3B.!!$F2 853
8 TraesCS3A01G476900 chr4B 129053213 129054213 1000 False 1038.000000 1038 85.40400 3005 4016 1 chr4B.!!$F1 1011
9 TraesCS3A01G476900 chr2A 218211976 218212971 995 True 1038.000000 1038 85.46000 3005 4014 1 chr2A.!!$R1 1009
10 TraesCS3A01G476900 chr6B 534188465 534189443 978 True 863.000000 863 82.69400 3005 4016 1 chr6B.!!$R1 1011
11 TraesCS3A01G476900 chr6B 675195907 675196474 567 True 475.000000 475 82.66200 4153 4692 1 chr6B.!!$R2 539
12 TraesCS3A01G476900 chr1D 386377403 386378331 928 True 804.000000 804 83.07000 4203 5110 1 chr1D.!!$R2 907
13 TraesCS3A01G476900 chr6D 86934415 86935345 930 False 784.000000 784 82.65000 4203 5110 1 chr6D.!!$F1 907
14 TraesCS3A01G476900 chr6A 369411560 369412481 921 True 784.000000 784 82.71500 4207 5110 1 chr6A.!!$R1 903
15 TraesCS3A01G476900 chr5B 195738451 195739376 925 False 675.000000 675 80.65200 4203 5110 1 chr5B.!!$F2 907

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
658 7825 0.109086 CGTCTCCGTCAACTGCAGAT 60.109 55.000 23.35 5.41 0.00 2.90 F
1594 8867 0.037326 TCTTAGTGGCAGGCTGAACG 60.037 55.000 20.86 3.50 0.00 3.95 F
1762 9035 0.872881 CTTGCAGTTGCCTGTGTTGC 60.873 55.000 1.06 0.00 41.02 4.17 F
2664 9974 2.733552 CCAACTGTCAGTTCTGATGTCG 59.266 50.000 15.48 2.20 36.03 4.35 F
3963 11404 1.002544 GTCTCACTAAGCCAAGCCTGT 59.997 52.381 0.00 0.00 0.00 4.00 F
4671 12436 1.081906 GTGCACCTGTGTTGCGATG 60.082 57.895 5.22 0.00 0.00 3.84 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2445 9755 0.254178 CCACATCCCTGGGAGTTCAG 59.746 60.000 21.99 10.45 34.05 3.02 R
3407 10825 1.289160 TAGATTGGGGCTCTGTGCTT 58.711 50.000 1.44 0.00 42.39 3.91 R
3547 10965 3.118738 ACGGACTGTGGACATATTTCTCC 60.119 47.826 0.00 0.00 0.00 3.71 R
4645 12409 2.555325 CAACACAGGTGCACATCAAGAT 59.445 45.455 20.43 0.00 0.00 2.40 R
5007 12782 0.461135 AAACCTGCAACAGTGGCAAG 59.539 50.000 3.61 0.00 41.39 4.01 R
6591 15250 0.109689 GACCGTCGTGTCTCTCCAAG 60.110 60.000 6.61 0.00 32.39 3.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
78 3873 1.810755 GGGGTAGCTTAAACTGTGTGC 59.189 52.381 0.00 0.00 0.00 4.57
94 3889 1.202710 TGTGCTTTCGCCAAGGTAAGA 60.203 47.619 0.00 0.00 32.37 2.10
224 4020 7.883217 TCTAGATGTTAGTCCGGATTTCATAC 58.117 38.462 7.81 1.23 0.00 2.39
225 4021 6.479972 AGATGTTAGTCCGGATTTCATACA 57.520 37.500 7.81 7.32 0.00 2.29
226 4022 6.516718 AGATGTTAGTCCGGATTTCATACAG 58.483 40.000 7.81 0.00 0.00 2.74
235 4031 5.780282 TCCGGATTTCATACAGATGGATAGT 59.220 40.000 0.00 0.00 33.49 2.12
310 4110 6.322491 GGTCACATTACCTTTGCATTACTTC 58.678 40.000 0.00 0.00 36.53 3.01
351 4151 2.105821 TGTTAGTGCTAGTGGCCAAACT 59.894 45.455 7.24 3.44 40.92 2.66
369 4250 3.199880 ACTAGAGAGAGAGAGAGCAGC 57.800 52.381 0.00 0.00 0.00 5.25
395 4276 1.106944 GGGTTGGGCGGTATGAATGG 61.107 60.000 0.00 0.00 0.00 3.16
427 4308 6.325919 TGGGAACAATTTATCTCACACAAC 57.674 37.500 0.00 0.00 37.44 3.32
432 4313 5.305585 ACAATTTATCTCACACAACGAGGT 58.694 37.500 0.00 0.00 0.00 3.85
455 4336 3.126858 TGAATGTAGCAAGATTCAACCGC 59.873 43.478 0.00 0.00 41.11 5.68
457 4338 3.603158 TGTAGCAAGATTCAACCGCTA 57.397 42.857 0.00 0.00 34.18 4.26
540 7707 2.159043 TCGGCTCATCTCTTTCATGGTC 60.159 50.000 0.00 0.00 0.00 4.02
597 7764 4.387598 TGGTGCTTGCATTTTGCTAAATT 58.612 34.783 3.23 0.00 45.31 1.82
607 7774 7.839907 TGCATTTTGCTAAATTTATCTCAGGT 58.160 30.769 3.23 0.00 45.31 4.00
623 7790 5.984725 TCTCAGGTTTTTAGGCGATATTCA 58.015 37.500 0.00 0.00 0.00 2.57
635 7802 4.343526 AGGCGATATTCATTCAGTGAGAGT 59.656 41.667 0.00 0.00 38.29 3.24
658 7825 0.109086 CGTCTCCGTCAACTGCAGAT 60.109 55.000 23.35 5.41 0.00 2.90
659 7826 1.634702 GTCTCCGTCAACTGCAGATC 58.365 55.000 23.35 6.44 0.00 2.75
678 7845 3.961480 TCCGTCTGTGATGACTTCATT 57.039 42.857 0.00 0.00 36.54 2.57
702 7869 6.953101 TGGTCTTAAAATGATGTACCAGCTA 58.047 36.000 0.00 0.00 32.07 3.32
721 7888 7.232127 ACCAGCTAAGTTACTTGTACAGACTAA 59.768 37.037 8.00 0.00 0.00 2.24
737 7904 5.475909 ACAGACTAACTCACGAAGGTAATCA 59.524 40.000 0.00 0.00 25.27 2.57
746 7914 5.301555 TCACGAAGGTAATCAAACACATGA 58.698 37.500 0.00 0.00 0.00 3.07
747 7915 5.408299 TCACGAAGGTAATCAAACACATGAG 59.592 40.000 0.00 0.00 31.76 2.90
763 7931 9.965824 AAACACATGAGTTATTTTAGTGGAAAG 57.034 29.630 9.01 0.00 0.00 2.62
875 8055 2.294233 CTCCACCAAATGCATTATCGGG 59.706 50.000 13.39 13.99 0.00 5.14
876 8056 2.092158 TCCACCAAATGCATTATCGGGA 60.092 45.455 13.39 14.43 0.00 5.14
877 8057 2.692557 CCACCAAATGCATTATCGGGAA 59.307 45.455 13.39 0.00 0.00 3.97
880 8060 4.097741 CACCAAATGCATTATCGGGAAAGA 59.902 41.667 13.39 0.00 0.00 2.52
881 8061 4.097892 ACCAAATGCATTATCGGGAAAGAC 59.902 41.667 13.39 0.00 0.00 3.01
883 8063 5.221303 CCAAATGCATTATCGGGAAAGACAT 60.221 40.000 13.39 0.00 0.00 3.06
884 8064 6.275335 CAAATGCATTATCGGGAAAGACATT 58.725 36.000 13.39 0.00 0.00 2.71
912 8146 2.857483 TCGCTCCAAAAGATTTCACCA 58.143 42.857 0.00 0.00 0.00 4.17
935 8169 1.135803 GCGCGATGTTTTTGGCTTCTA 60.136 47.619 12.10 0.00 0.00 2.10
991 8242 0.322906 GCTTTCTTCCCTCCCACTGG 60.323 60.000 0.00 0.00 0.00 4.00
1047 8301 4.503314 CGCCCCCGTACCTTCGTC 62.503 72.222 0.00 0.00 0.00 4.20
1048 8302 4.503314 GCCCCCGTACCTTCGTCG 62.503 72.222 0.00 0.00 0.00 5.12
1049 8303 4.503314 CCCCCGTACCTTCGTCGC 62.503 72.222 0.00 0.00 0.00 5.19
1167 8422 2.682136 TCCCTCGCCGGAACATCA 60.682 61.111 5.05 0.00 33.16 3.07
1248 8517 1.153349 GGCTGTTCTCCATCCGACC 60.153 63.158 0.00 0.00 0.00 4.79
1282 8551 2.509336 CGCCGTTCGCCATCTCTT 60.509 61.111 0.00 0.00 0.00 2.85
1316 8585 0.577269 CGATCGATTTCTGGGTTCGC 59.423 55.000 10.26 0.00 33.08 4.70
1418 8688 3.192844 TCGAATCCGGGAATAGATGCTAC 59.807 47.826 0.00 0.00 36.24 3.58
1439 8709 5.073311 ACTTTGATTTACTCTCTGCGCTA 57.927 39.130 9.73 0.00 0.00 4.26
1450 8720 1.179174 TCTGCGCTACGGATGCCTAT 61.179 55.000 9.73 0.00 0.00 2.57
1464 8734 2.960129 CTATTCCGCGCCGTGGAC 60.960 66.667 20.66 0.00 42.31 4.02
1501 8774 1.205657 TTTAGAGGAAATAGCGCGCG 58.794 50.000 28.44 28.44 0.00 6.86
1587 8860 3.937706 CTGAAAGTGATCTTAGTGGCAGG 59.062 47.826 0.00 0.00 33.09 4.85
1590 8863 1.209019 AGTGATCTTAGTGGCAGGCTG 59.791 52.381 10.94 10.94 0.00 4.85
1594 8867 0.037326 TCTTAGTGGCAGGCTGAACG 60.037 55.000 20.86 3.50 0.00 3.95
1640 8913 7.707624 TGCAAATTCTGATATCCACTTTCTT 57.292 32.000 0.00 0.00 0.00 2.52
1676 8949 6.091849 CACTGTCTAATCTGAACCTGACATTG 59.908 42.308 0.00 0.00 34.57 2.82
1695 8968 8.739039 TGACATTGTTTTAATCCTTGATAGTGG 58.261 33.333 0.00 0.00 0.00 4.00
1700 8973 8.450578 TGTTTTAATCCTTGATAGTGGCTATG 57.549 34.615 0.00 0.00 0.00 2.23
1722 8995 3.312736 ACCACTGGTCACCTCAAAATT 57.687 42.857 0.00 0.00 0.00 1.82
1758 9031 1.007734 CTGCTTGCAGTTGCCTGTG 60.008 57.895 13.89 0.00 41.02 3.66
1762 9035 0.872881 CTTGCAGTTGCCTGTGTTGC 60.873 55.000 1.06 0.00 41.02 4.17
1815 9088 4.776743 CAGTCAGCACAACTCATTTACAC 58.223 43.478 0.00 0.00 0.00 2.90
1854 9127 2.825532 TCTCTTTAAGTGCATTTGGGCC 59.174 45.455 4.47 0.00 0.00 5.80
1958 9234 5.928976 TGGGTGTCTGTATATGAATTGGAG 58.071 41.667 0.00 0.00 0.00 3.86
2009 9285 8.015185 ACCATTCCAATCAATTTAATCTGAGG 57.985 34.615 0.00 0.00 0.00 3.86
2234 9544 4.414337 AGTAGAAGATGACATGGAAGCC 57.586 45.455 0.00 0.00 0.00 4.35
2402 9712 2.810274 CCTCGATGATTGCATAAGTGGG 59.190 50.000 0.00 0.00 34.11 4.61
2444 9754 5.762711 TCCAAGAGTTCATGTCAAAAATCGA 59.237 36.000 0.00 0.00 0.00 3.59
2445 9755 5.853282 CCAAGAGTTCATGTCAAAAATCGAC 59.147 40.000 0.00 0.00 0.00 4.20
2583 9893 5.333952 GCTACTGAAGATTCATATGCAGCAC 60.334 44.000 0.00 0.00 36.46 4.40
2664 9974 2.733552 CCAACTGTCAGTTCTGATGTCG 59.266 50.000 15.48 2.20 36.03 4.35
2705 10015 7.171653 TGGAAAACACTTTGGGAAAAGAAAAT 58.828 30.769 5.27 0.00 34.06 1.82
3128 10438 3.271729 CAGATCAAATGCAGACAGAGCT 58.728 45.455 0.00 0.00 0.00 4.09
3407 10825 6.129414 AGAGTACCACTGAGAGAGTTAAGA 57.871 41.667 0.00 0.00 29.75 2.10
3547 10965 1.467035 GCAATCAAGCAGGCGAAGAAG 60.467 52.381 0.00 0.00 0.00 2.85
3963 11404 1.002544 GTCTCACTAAGCCAAGCCTGT 59.997 52.381 0.00 0.00 0.00 4.00
4023 11467 9.558396 TTTTAGCATTGAAATTTCTGGTCAAAT 57.442 25.926 18.64 6.56 35.07 2.32
4024 11468 8.761575 TTAGCATTGAAATTTCTGGTCAAATC 57.238 30.769 18.64 2.62 35.07 2.17
4025 11469 6.761312 AGCATTGAAATTTCTGGTCAAATCA 58.239 32.000 18.64 0.00 35.07 2.57
4026 11470 7.218614 AGCATTGAAATTTCTGGTCAAATCAA 58.781 30.769 18.64 2.36 35.07 2.57
4027 11471 7.716123 AGCATTGAAATTTCTGGTCAAATCAAA 59.284 29.630 18.64 1.25 35.07 2.69
4034 11479 9.933723 AAATTTCTGGTCAAATCAAAATAGGAG 57.066 29.630 0.00 0.00 0.00 3.69
4448 11902 5.649395 GGATCTGATGAATTGTCCAAGTGAA 59.351 40.000 0.00 0.00 0.00 3.18
4452 11906 8.634335 TCTGATGAATTGTCCAAGTGAATAAA 57.366 30.769 0.00 0.00 0.00 1.40
4644 12408 7.931578 TCTGTTTTCTTGACTTGGTTCTTTA 57.068 32.000 0.00 0.00 0.00 1.85
4645 12409 8.343168 TCTGTTTTCTTGACTTGGTTCTTTAA 57.657 30.769 0.00 0.00 0.00 1.52
4671 12436 1.081906 GTGCACCTGTGTTGCGATG 60.082 57.895 5.22 0.00 0.00 3.84
4693 12458 6.266168 TGAATTGAACGATTGCCAGTTTAT 57.734 33.333 0.00 0.00 0.00 1.40
4716 12481 3.988379 TTTTTCACTGCTGTCATGGAC 57.012 42.857 0.00 0.00 0.00 4.02
5253 13030 9.407380 ACTGACCTGCAATATAATGAACATTTA 57.593 29.630 5.37 0.22 32.50 1.40
5479 13258 1.030457 GATCATGAAGCAGCAAGGGG 58.970 55.000 0.00 0.00 0.00 4.79
5623 13822 2.824341 CTCATTTCTCTTGCCTTGCCTT 59.176 45.455 0.00 0.00 0.00 4.35
5653 13856 3.330110 CAGGGGATATCTCATGCTTTCCT 59.670 47.826 3.97 0.00 0.00 3.36
5661 13864 3.719871 TCTCATGCTTTCCTAGGGTGTA 58.280 45.455 9.46 0.00 0.00 2.90
5670 13873 2.116238 TCCTAGGGTGTAGGCAACATC 58.884 52.381 9.46 0.00 41.10 3.06
5717 13921 8.873144 TCTATCATGATTGGAGTGAATGTATGA 58.127 33.333 14.65 0.00 0.00 2.15
5718 13922 9.668497 CTATCATGATTGGAGTGAATGTATGAT 57.332 33.333 14.65 0.00 34.19 2.45
5729 13933 7.251704 AGTGAATGTATGATTCTTAAAGGCG 57.748 36.000 0.00 0.00 0.00 5.52
5730 13934 5.909610 GTGAATGTATGATTCTTAAAGGCGC 59.090 40.000 0.00 0.00 0.00 6.53
5763 13967 1.755179 TTACTACTCCCTCCGTTCCG 58.245 55.000 0.00 0.00 0.00 4.30
5766 13970 1.341778 ACTACTCCCTCCGTTCCGATT 60.342 52.381 0.00 0.00 0.00 3.34
5769 13973 1.479730 ACTCCCTCCGTTCCGATTTAC 59.520 52.381 0.00 0.00 0.00 2.01
5771 13975 1.753073 TCCCTCCGTTCCGATTTACTC 59.247 52.381 0.00 0.00 0.00 2.59
5773 13977 1.133790 CCTCCGTTCCGATTTACTCGT 59.866 52.381 0.00 0.00 46.18 4.18
5775 13979 1.186030 CCGTTCCGATTTACTCGTCG 58.814 55.000 0.00 0.00 46.18 5.12
5777 13981 1.576246 CGTTCCGATTTACTCGTCGTG 59.424 52.381 0.00 0.00 46.18 4.35
5778 13982 1.916000 GTTCCGATTTACTCGTCGTGG 59.084 52.381 0.00 0.00 46.18 4.94
5785 13989 4.618489 CGATTTACTCGTCGTGGTTTTAGT 59.382 41.667 0.00 0.00 42.56 2.24
5787 13991 5.888412 TTTACTCGTCGTGGTTTTAGTTC 57.112 39.130 0.00 0.00 0.00 3.01
5794 13998 5.966503 TCGTCGTGGTTTTAGTTCAAATTTG 59.033 36.000 12.15 12.15 0.00 2.32
5795 13999 5.966503 CGTCGTGGTTTTAGTTCAAATTTGA 59.033 36.000 16.91 16.91 34.92 2.69
5812 14016 7.860373 TCAAATTTGAACTAAAACCACGATGAG 59.140 33.333 18.45 0.00 33.55 2.90
5815 14019 7.789273 TTTGAACTAAAACCACGATGAGTAA 57.211 32.000 0.00 0.00 0.00 2.24
5816 14020 7.789273 TTGAACTAAAACCACGATGAGTAAA 57.211 32.000 0.00 0.00 0.00 2.01
5817 14021 7.972832 TGAACTAAAACCACGATGAGTAAAT 57.027 32.000 0.00 0.00 0.00 1.40
5818 14022 8.025243 TGAACTAAAACCACGATGAGTAAATC 57.975 34.615 0.00 0.00 0.00 2.17
5911 14488 1.985159 CCTACCTATATTGGCCTGGCA 59.015 52.381 22.05 0.00 0.00 4.92
5924 14501 1.202746 GCCTGGCATCTCTTAAGGAGG 60.203 57.143 15.17 2.21 42.10 4.30
5926 14503 0.839946 TGGCATCTCTTAAGGAGGGC 59.160 55.000 18.54 18.54 42.10 5.19
5927 14504 0.109532 GGCATCTCTTAAGGAGGGCC 59.890 60.000 16.11 16.26 46.79 5.80
5930 14507 1.419387 CATCTCTTAAGGAGGGCCTGG 59.581 57.143 12.95 0.00 46.28 4.45
5931 14508 0.983378 TCTCTTAAGGAGGGCCTGGC 60.983 60.000 12.95 11.05 46.28 4.85
5932 14509 1.988982 CTCTTAAGGAGGGCCTGGCC 61.989 65.000 29.93 29.93 46.28 5.36
5942 14519 1.529309 GGCCTGGCCTCTCTTAAGG 59.471 63.158 30.42 0.52 46.69 2.69
5943 14520 0.983378 GGCCTGGCCTCTCTTAAGGA 60.983 60.000 30.42 0.00 46.69 3.36
5944 14521 0.467804 GCCTGGCCTCTCTTAAGGAG 59.532 60.000 7.66 8.12 43.12 3.69
5987 14564 9.163894 TCTACCTTGAATGAGGATAGAATTGAT 57.836 33.333 0.00 0.00 39.25 2.57
5995 14572 9.716531 GAATGAGGATAGAATTGATCATGTGTA 57.283 33.333 0.00 0.00 0.00 2.90
5996 14573 9.722184 AATGAGGATAGAATTGATCATGTGTAG 57.278 33.333 0.00 0.00 0.00 2.74
6011 14588 5.122711 TCATGTGTAGAGAACAATGCATGTG 59.877 40.000 0.00 3.58 42.99 3.21
6027 14604 2.113860 TGTGGATTAGAGCAGTTGGC 57.886 50.000 0.00 0.00 45.30 4.52
6045 14622 1.376424 CGAGCTGTGCCTTCATGGT 60.376 57.895 0.00 0.00 38.35 3.55
6046 14623 1.642037 CGAGCTGTGCCTTCATGGTG 61.642 60.000 0.00 0.00 38.35 4.17
6047 14624 1.303888 AGCTGTGCCTTCATGGTGG 60.304 57.895 0.00 0.00 38.35 4.61
6055 14632 4.738998 TTCATGGTGGCAGGGGCG 62.739 66.667 0.00 0.00 42.47 6.13
6075 14652 3.717707 CGGAGCAAGGAATTAGAATCGA 58.282 45.455 0.00 0.00 0.00 3.59
6076 14653 3.738282 CGGAGCAAGGAATTAGAATCGAG 59.262 47.826 0.00 0.00 0.00 4.04
6095 14750 1.554160 AGGGAGATGAGCAAGACACAG 59.446 52.381 0.00 0.00 0.00 3.66
6120 14775 8.361139 AGATGTTACGGATTTATACTTGAGGAG 58.639 37.037 0.00 0.00 0.00 3.69
6125 14780 6.807789 ACGGATTTATACTTGAGGAGAAGAC 58.192 40.000 0.00 0.00 0.00 3.01
6134 14789 5.119694 ACTTGAGGAGAAGACAAAGACAAC 58.880 41.667 0.00 0.00 0.00 3.32
6161 14816 6.035005 CACGTTATGATGTACCAAGTCTCAAG 59.965 42.308 0.00 0.00 0.00 3.02
6163 14818 6.980978 CGTTATGATGTACCAAGTCTCAAGAT 59.019 38.462 0.00 0.00 0.00 2.40
6192 14847 7.476540 AACGTATAGATAGCCAACCATATCA 57.523 36.000 0.00 0.00 31.97 2.15
6250 14905 3.906218 AGCCTAATCTCTATGGTCATGCA 59.094 43.478 0.00 0.00 0.00 3.96
6266 14921 3.634910 TCATGCATCGCTAGTTGTAGGTA 59.365 43.478 0.00 0.00 0.00 3.08
6284 14942 7.212274 TGTAGGTACTTCTTTCCAACACTAAC 58.788 38.462 0.00 0.00 41.75 2.34
6293 14951 3.326836 TCCAACACTAACGATCATGCA 57.673 42.857 0.00 0.00 0.00 3.96
6314 14972 7.493743 TGCAATGCAACAATTGTTTCTAAAT 57.506 28.000 21.10 3.97 39.33 1.40
6363 15022 9.569122 TTTTTCTTTAGCTGGTAGTCAGTAATT 57.431 29.630 0.00 0.00 45.08 1.40
6365 15024 9.871238 TTTCTTTAGCTGGTAGTCAGTAATTAG 57.129 33.333 0.00 0.00 45.08 1.73
6366 15025 8.591114 TCTTTAGCTGGTAGTCAGTAATTAGT 57.409 34.615 0.00 0.00 45.08 2.24
6367 15026 9.690913 TCTTTAGCTGGTAGTCAGTAATTAGTA 57.309 33.333 0.00 0.00 45.08 1.82
6368 15027 9.953697 CTTTAGCTGGTAGTCAGTAATTAGTAG 57.046 37.037 0.00 0.00 45.08 2.57
6369 15028 9.690913 TTTAGCTGGTAGTCAGTAATTAGTAGA 57.309 33.333 0.00 0.00 45.08 2.59
6370 15029 9.863650 TTAGCTGGTAGTCAGTAATTAGTAGAT 57.136 33.333 0.00 0.00 45.08 1.98
6371 15030 8.398878 AGCTGGTAGTCAGTAATTAGTAGATC 57.601 38.462 0.00 0.00 45.08 2.75
6372 15031 7.999545 AGCTGGTAGTCAGTAATTAGTAGATCA 59.000 37.037 0.00 0.00 45.08 2.92
6373 15032 8.798402 GCTGGTAGTCAGTAATTAGTAGATCAT 58.202 37.037 0.00 0.00 45.08 2.45
6420 15079 9.606631 TTAAGTAGACTAAGTACTAGTGGCTAC 57.393 37.037 19.68 19.68 41.17 3.58
6421 15080 7.436320 AGTAGACTAAGTACTAGTGGCTACT 57.564 40.000 22.27 22.27 41.17 2.57
6422 15081 8.546083 AGTAGACTAAGTACTAGTGGCTACTA 57.454 38.462 24.65 9.80 41.76 1.82
6441 15100 5.246145 ACTAGCGGTAGATTTGTGTAGAC 57.754 43.478 27.34 0.00 0.00 2.59
6442 15101 3.521947 AGCGGTAGATTTGTGTAGACC 57.478 47.619 0.00 0.00 0.00 3.85
6447 15106 5.517322 GGTAGATTTGTGTAGACCGATCT 57.483 43.478 9.28 9.28 39.15 2.75
6448 15107 5.282510 GGTAGATTTGTGTAGACCGATCTG 58.717 45.833 12.63 0.00 36.29 2.90
6449 15108 4.392921 AGATTTGTGTAGACCGATCTGG 57.607 45.455 0.00 2.55 46.41 3.86
6450 15109 2.380084 TTTGTGTAGACCGATCTGGC 57.620 50.000 0.00 0.00 43.94 4.85
6451 15110 1.557099 TTGTGTAGACCGATCTGGCT 58.443 50.000 0.00 0.00 43.94 4.75
6452 15111 1.557099 TGTGTAGACCGATCTGGCTT 58.443 50.000 0.00 0.00 43.94 4.35
6453 15112 1.899814 TGTGTAGACCGATCTGGCTTT 59.100 47.619 0.00 0.00 43.94 3.51
6454 15113 3.093814 TGTGTAGACCGATCTGGCTTTA 58.906 45.455 0.00 0.00 43.94 1.85
6455 15114 3.512329 TGTGTAGACCGATCTGGCTTTAA 59.488 43.478 0.00 0.00 43.94 1.52
6456 15115 4.020928 TGTGTAGACCGATCTGGCTTTAAA 60.021 41.667 0.00 0.00 43.94 1.52
6457 15116 4.933400 GTGTAGACCGATCTGGCTTTAAAA 59.067 41.667 0.00 0.00 43.94 1.52
6458 15117 4.933400 TGTAGACCGATCTGGCTTTAAAAC 59.067 41.667 0.00 0.00 43.94 2.43
6459 15118 4.287766 AGACCGATCTGGCTTTAAAACT 57.712 40.909 3.85 0.00 43.94 2.66
6460 15119 4.254492 AGACCGATCTGGCTTTAAAACTC 58.746 43.478 3.85 0.00 43.94 3.01
6461 15120 4.020128 AGACCGATCTGGCTTTAAAACTCT 60.020 41.667 3.85 0.00 43.94 3.24
6462 15121 4.652822 ACCGATCTGGCTTTAAAACTCTT 58.347 39.130 3.85 0.00 43.94 2.85
6463 15122 5.801380 ACCGATCTGGCTTTAAAACTCTTA 58.199 37.500 3.85 0.00 43.94 2.10
6464 15123 6.235664 ACCGATCTGGCTTTAAAACTCTTAA 58.764 36.000 3.85 0.00 43.94 1.85
6465 15124 6.713450 ACCGATCTGGCTTTAAAACTCTTAAA 59.287 34.615 3.85 0.00 43.94 1.52
6466 15125 7.393515 ACCGATCTGGCTTTAAAACTCTTAAAT 59.606 33.333 3.85 0.00 43.94 1.40
6467 15126 7.698130 CCGATCTGGCTTTAAAACTCTTAAATG 59.302 37.037 0.00 0.00 0.00 2.32
6468 15127 8.450964 CGATCTGGCTTTAAAACTCTTAAATGA 58.549 33.333 0.00 0.00 0.00 2.57
6479 15138 7.759489 AAACTCTTAAATGATAAGTGCCACA 57.241 32.000 0.00 0.00 0.00 4.17
6480 15139 7.759489 AACTCTTAAATGATAAGTGCCACAA 57.241 32.000 0.00 0.00 0.00 3.33
6481 15140 7.383102 ACTCTTAAATGATAAGTGCCACAAG 57.617 36.000 0.00 0.00 0.00 3.16
6482 15141 6.942576 ACTCTTAAATGATAAGTGCCACAAGT 59.057 34.615 0.00 0.00 0.00 3.16
6483 15142 7.119846 ACTCTTAAATGATAAGTGCCACAAGTC 59.880 37.037 0.00 0.00 0.00 3.01
6484 15143 6.939730 TCTTAAATGATAAGTGCCACAAGTCA 59.060 34.615 0.00 0.00 0.00 3.41
6485 15144 5.633830 AAATGATAAGTGCCACAAGTCAG 57.366 39.130 0.00 0.00 0.00 3.51
6486 15145 3.057969 TGATAAGTGCCACAAGTCAGG 57.942 47.619 0.00 0.00 0.00 3.86
6487 15146 2.371841 TGATAAGTGCCACAAGTCAGGT 59.628 45.455 0.00 0.00 0.00 4.00
6488 15147 2.254546 TAAGTGCCACAAGTCAGGTG 57.745 50.000 0.00 0.00 36.03 4.00
6489 15148 0.255890 AAGTGCCACAAGTCAGGTGT 59.744 50.000 0.00 0.00 34.46 4.16
6490 15149 0.464373 AGTGCCACAAGTCAGGTGTG 60.464 55.000 0.00 0.00 44.90 3.82
6491 15150 0.748005 GTGCCACAAGTCAGGTGTGT 60.748 55.000 4.06 0.00 44.00 3.72
6492 15151 0.747644 TGCCACAAGTCAGGTGTGTG 60.748 55.000 4.06 0.00 44.00 3.82
6494 15153 2.024918 CACAAGTCAGGTGTGTGGC 58.975 57.895 0.00 0.00 41.22 5.01
6495 15154 0.747644 CACAAGTCAGGTGTGTGGCA 60.748 55.000 0.00 0.00 41.22 4.92
6496 15155 0.748005 ACAAGTCAGGTGTGTGGCAC 60.748 55.000 11.55 11.55 46.97 5.01
6497 15156 0.464373 CAAGTCAGGTGTGTGGCACT 60.464 55.000 19.83 0.00 46.86 4.40
6498 15157 0.179045 AAGTCAGGTGTGTGGCACTC 60.179 55.000 19.83 16.03 46.86 3.51
6499 15158 1.598130 GTCAGGTGTGTGGCACTCC 60.598 63.158 19.83 17.17 46.86 3.85
6502 15161 4.250305 GGTGTGTGGCACTCCGGT 62.250 66.667 19.83 0.00 46.86 5.28
6503 15162 2.665185 GTGTGTGGCACTCCGGTC 60.665 66.667 19.83 2.84 44.41 4.79
6504 15163 2.842462 TGTGTGGCACTCCGGTCT 60.842 61.111 19.83 0.00 35.11 3.85
6505 15164 2.426023 GTGTGGCACTCCGGTCTT 59.574 61.111 19.83 0.00 34.14 3.01
6506 15165 1.961277 GTGTGGCACTCCGGTCTTG 60.961 63.158 19.83 0.00 34.14 3.02
6507 15166 2.137528 TGTGGCACTCCGGTCTTGA 61.138 57.895 19.83 0.00 34.14 3.02
6508 15167 1.668151 GTGGCACTCCGGTCTTGAC 60.668 63.158 11.13 0.00 34.14 3.18
6509 15168 2.432628 GGCACTCCGGTCTTGACG 60.433 66.667 0.00 0.00 0.00 4.35
6510 15169 2.338984 GCACTCCGGTCTTGACGT 59.661 61.111 0.00 0.00 0.00 4.34
6511 15170 1.300697 GCACTCCGGTCTTGACGTT 60.301 57.895 0.00 0.00 0.00 3.99
6512 15171 0.878961 GCACTCCGGTCTTGACGTTT 60.879 55.000 0.00 0.00 0.00 3.60
6513 15172 1.578583 CACTCCGGTCTTGACGTTTT 58.421 50.000 0.00 0.00 0.00 2.43
6514 15173 1.937899 CACTCCGGTCTTGACGTTTTT 59.062 47.619 0.00 0.00 0.00 1.94
6535 15194 7.913674 TTTTTGTTGGCAATTCTAGTTGTTT 57.086 28.000 1.92 0.00 34.18 2.83
6536 15195 7.913674 TTTTGTTGGCAATTCTAGTTGTTTT 57.086 28.000 1.92 0.00 34.18 2.43
6537 15196 6.900568 TTGTTGGCAATTCTAGTTGTTTTG 57.099 33.333 1.92 0.00 0.00 2.44
6538 15197 6.214191 TGTTGGCAATTCTAGTTGTTTTGA 57.786 33.333 1.92 0.00 0.00 2.69
6539 15198 6.634805 TGTTGGCAATTCTAGTTGTTTTGAA 58.365 32.000 1.92 0.00 0.00 2.69
6540 15199 7.271511 TGTTGGCAATTCTAGTTGTTTTGAAT 58.728 30.769 1.92 0.00 0.00 2.57
6541 15200 7.437862 TGTTGGCAATTCTAGTTGTTTTGAATC 59.562 33.333 1.92 0.00 0.00 2.52
6542 15201 7.048629 TGGCAATTCTAGTTGTTTTGAATCA 57.951 32.000 0.00 0.00 0.00 2.57
6543 15202 7.147312 TGGCAATTCTAGTTGTTTTGAATCAG 58.853 34.615 0.00 0.00 0.00 2.90
6544 15203 7.014134 TGGCAATTCTAGTTGTTTTGAATCAGA 59.986 33.333 0.00 0.00 0.00 3.27
6545 15204 7.327032 GGCAATTCTAGTTGTTTTGAATCAGAC 59.673 37.037 0.00 0.00 0.00 3.51
6546 15205 7.862372 GCAATTCTAGTTGTTTTGAATCAGACA 59.138 33.333 0.00 0.00 0.00 3.41
6547 15206 9.734620 CAATTCTAGTTGTTTTGAATCAGACAA 57.265 29.630 9.26 9.26 0.00 3.18
6549 15208 9.736023 ATTCTAGTTGTTTTGAATCAGACAAAC 57.264 29.630 13.29 8.41 37.05 2.93
6550 15209 7.406553 TCTAGTTGTTTTGAATCAGACAAACG 58.593 34.615 13.29 7.34 37.05 3.60
6551 15210 6.189677 AGTTGTTTTGAATCAGACAAACGA 57.810 33.333 13.29 5.64 37.05 3.85
6552 15211 6.795399 AGTTGTTTTGAATCAGACAAACGAT 58.205 32.000 13.29 2.09 37.05 3.73
6553 15212 6.912591 AGTTGTTTTGAATCAGACAAACGATC 59.087 34.615 13.29 4.42 37.05 3.69
6554 15213 6.370433 TGTTTTGAATCAGACAAACGATCA 57.630 33.333 0.00 0.00 37.05 2.92
6555 15214 6.790282 TGTTTTGAATCAGACAAACGATCAA 58.210 32.000 0.00 0.00 37.05 2.57
6556 15215 7.424803 TGTTTTGAATCAGACAAACGATCAAT 58.575 30.769 0.00 0.00 37.05 2.57
6557 15216 7.591057 TGTTTTGAATCAGACAAACGATCAATC 59.409 33.333 0.00 0.00 37.05 2.67
6558 15217 7.439157 TTTGAATCAGACAAACGATCAATCT 57.561 32.000 0.00 0.00 33.25 2.40
6559 15218 7.439157 TTGAATCAGACAAACGATCAATCTT 57.561 32.000 0.00 0.00 0.00 2.40
6560 15219 6.834876 TGAATCAGACAAACGATCAATCTTG 58.165 36.000 0.00 0.00 0.00 3.02
6561 15220 5.808042 ATCAGACAAACGATCAATCTTGG 57.192 39.130 0.00 0.00 0.00 3.61
6562 15221 3.436704 TCAGACAAACGATCAATCTTGGC 59.563 43.478 0.00 0.00 0.00 4.52
6563 15222 2.416547 AGACAAACGATCAATCTTGGCG 59.583 45.455 0.00 0.00 34.33 5.69
6564 15223 2.415168 GACAAACGATCAATCTTGGCGA 59.585 45.455 11.19 0.00 33.13 5.54
6565 15224 3.009723 ACAAACGATCAATCTTGGCGAT 58.990 40.909 11.19 0.00 33.13 4.58
6566 15225 3.181507 ACAAACGATCAATCTTGGCGATG 60.182 43.478 11.19 11.08 31.20 3.84
6567 15226 1.586422 ACGATCAATCTTGGCGATGG 58.414 50.000 11.19 0.00 31.20 3.51
6568 15227 1.134401 ACGATCAATCTTGGCGATGGT 60.134 47.619 11.19 0.00 31.20 3.55
6569 15228 1.942657 CGATCAATCTTGGCGATGGTT 59.057 47.619 0.00 0.00 31.20 3.67
6570 15229 3.130633 CGATCAATCTTGGCGATGGTTA 58.869 45.455 0.00 0.00 31.20 2.85
6571 15230 3.059597 CGATCAATCTTGGCGATGGTTAC 60.060 47.826 0.00 0.00 31.20 2.50
6572 15231 3.342377 TCAATCTTGGCGATGGTTACA 57.658 42.857 0.00 0.00 31.20 2.41
6573 15232 3.680490 TCAATCTTGGCGATGGTTACAA 58.320 40.909 0.00 0.00 31.20 2.41
6574 15233 3.689161 TCAATCTTGGCGATGGTTACAAG 59.311 43.478 0.00 0.00 41.14 3.16
6575 15234 2.107950 TCTTGGCGATGGTTACAAGG 57.892 50.000 0.00 0.00 40.41 3.61
6576 15235 1.094785 CTTGGCGATGGTTACAAGGG 58.905 55.000 0.00 0.00 37.31 3.95
6577 15236 0.322997 TTGGCGATGGTTACAAGGGG 60.323 55.000 0.00 0.00 0.00 4.79
6578 15237 1.453197 GGCGATGGTTACAAGGGGG 60.453 63.158 0.00 0.00 0.00 5.40
6595 15254 3.808834 GGGGGTTTATATCTCCCTTGG 57.191 52.381 6.23 0.00 40.88 3.61
6596 15255 3.332968 GGGGGTTTATATCTCCCTTGGA 58.667 50.000 6.23 0.00 40.88 3.53
6606 15265 2.654802 TCCCTTGGAGAGACACGAC 58.345 57.895 0.00 0.00 0.00 4.34
6607 15266 1.213013 CCCTTGGAGAGACACGACG 59.787 63.158 0.00 0.00 0.00 5.12
6608 15267 1.213013 CCTTGGAGAGACACGACGG 59.787 63.158 0.00 0.00 0.00 4.79
6609 15268 1.524863 CCTTGGAGAGACACGACGGT 61.525 60.000 0.00 0.00 0.00 4.83
6610 15269 0.109689 CTTGGAGAGACACGACGGTC 60.110 60.000 0.00 4.08 38.08 4.79
6611 15270 1.521450 TTGGAGAGACACGACGGTCC 61.521 60.000 1.91 3.26 38.59 4.46
6612 15271 1.970114 GGAGAGACACGACGGTCCA 60.970 63.158 1.91 0.00 38.59 4.02
6613 15272 1.502640 GAGAGACACGACGGTCCAG 59.497 63.158 1.91 0.00 38.59 3.86
6614 15273 0.954449 GAGAGACACGACGGTCCAGA 60.954 60.000 1.91 0.00 38.59 3.86
6615 15274 0.956410 AGAGACACGACGGTCCAGAG 60.956 60.000 1.91 0.00 38.59 3.35
6616 15275 1.924320 GAGACACGACGGTCCAGAGG 61.924 65.000 1.91 0.00 38.59 3.69
6617 15276 1.970114 GACACGACGGTCCAGAGGA 60.970 63.158 1.91 0.00 0.00 3.71
6618 15277 1.924320 GACACGACGGTCCAGAGGAG 61.924 65.000 1.91 0.00 29.39 3.69
6619 15278 2.361357 ACGACGGTCCAGAGGAGG 60.361 66.667 1.91 0.00 29.39 4.30
6620 15279 3.141488 CGACGGTCCAGAGGAGGG 61.141 72.222 1.91 0.00 29.39 4.30
6621 15280 2.359404 GACGGTCCAGAGGAGGGA 59.641 66.667 0.00 0.00 29.39 4.20
6625 15284 3.827898 GTCCAGAGGAGGGACGCG 61.828 72.222 3.53 3.53 44.80 6.01
6626 15285 4.361971 TCCAGAGGAGGGACGCGT 62.362 66.667 13.85 13.85 0.00 6.01
6627 15286 3.827898 CCAGAGGAGGGACGCGTC 61.828 72.222 30.67 30.67 43.04 5.19
6628 15287 4.180946 CAGAGGAGGGACGCGTCG 62.181 72.222 30.99 12.33 46.93 5.12
6632 15291 4.790861 GGAGGGACGCGTCGGTTC 62.791 72.222 30.99 25.22 0.00 3.62
6633 15292 4.790861 GAGGGACGCGTCGGTTCC 62.791 72.222 30.99 25.38 0.00 3.62
6639 15298 4.796231 CGCGTCGGTTCCAGGGAG 62.796 72.222 0.00 0.00 0.00 4.30
6640 15299 3.379445 GCGTCGGTTCCAGGGAGA 61.379 66.667 0.00 0.00 0.00 3.71
6641 15300 2.572284 CGTCGGTTCCAGGGAGAC 59.428 66.667 0.00 0.00 0.00 3.36
6642 15301 2.572284 GTCGGTTCCAGGGAGACG 59.428 66.667 7.22 7.22 0.00 4.18
6643 15302 2.678934 TCGGTTCCAGGGAGACGG 60.679 66.667 11.90 7.48 0.00 4.79
6644 15303 4.452733 CGGTTCCAGGGAGACGGC 62.453 72.222 6.01 0.00 0.00 5.68
6645 15304 4.452733 GGTTCCAGGGAGACGGCG 62.453 72.222 4.80 4.80 0.00 6.46
6646 15305 3.379445 GTTCCAGGGAGACGGCGA 61.379 66.667 16.62 0.00 0.00 5.54
6647 15306 3.379445 TTCCAGGGAGACGGCGAC 61.379 66.667 16.62 7.87 0.00 5.19
6666 15325 1.551430 ACGGTTCGAGAGAGAGAGAGA 59.449 52.381 0.00 0.00 43.69 3.10
6667 15326 2.201732 CGGTTCGAGAGAGAGAGAGAG 58.798 57.143 0.00 0.00 43.69 3.20
6668 15327 1.940613 GGTTCGAGAGAGAGAGAGAGC 59.059 57.143 0.00 0.00 43.69 4.09
6669 15328 2.627945 GTTCGAGAGAGAGAGAGAGCA 58.372 52.381 0.00 0.00 43.69 4.26
6670 15329 3.006940 GTTCGAGAGAGAGAGAGAGCAA 58.993 50.000 0.00 0.00 43.69 3.91
6671 15330 2.627945 TCGAGAGAGAGAGAGAGCAAC 58.372 52.381 0.00 0.00 34.84 4.17
6672 15331 1.670811 CGAGAGAGAGAGAGAGCAACC 59.329 57.143 0.00 0.00 0.00 3.77
6673 15332 1.670811 GAGAGAGAGAGAGAGCAACCG 59.329 57.143 0.00 0.00 0.00 4.44
6674 15333 1.004277 AGAGAGAGAGAGAGCAACCGT 59.996 52.381 0.00 0.00 0.00 4.83
6675 15334 1.132262 GAGAGAGAGAGAGCAACCGTG 59.868 57.143 0.00 0.00 0.00 4.94
6684 15343 4.505217 GCAACCGTGCGCTCGATG 62.505 66.667 31.12 26.79 41.93 3.84
6685 15344 3.853330 CAACCGTGCGCTCGATGG 61.853 66.667 31.12 17.48 0.00 3.51
6686 15345 4.063967 AACCGTGCGCTCGATGGA 62.064 61.111 31.12 0.00 0.00 3.41
6687 15346 4.796231 ACCGTGCGCTCGATGGAC 62.796 66.667 31.12 7.60 0.00 4.02
6688 15347 4.794439 CCGTGCGCTCGATGGACA 62.794 66.667 31.12 0.00 0.00 4.02
6689 15348 2.809174 CGTGCGCTCGATGGACAA 60.809 61.111 26.26 0.00 0.00 3.18
6690 15349 2.792290 CGTGCGCTCGATGGACAAG 61.792 63.158 26.26 0.00 0.00 3.16
6691 15350 2.125552 TGCGCTCGATGGACAAGG 60.126 61.111 9.73 0.00 0.00 3.61
6692 15351 2.892425 GCGCTCGATGGACAAGGG 60.892 66.667 0.00 0.00 0.00 3.95
6693 15352 2.202932 CGCTCGATGGACAAGGGG 60.203 66.667 0.00 0.00 0.00 4.79
6694 15353 2.721167 CGCTCGATGGACAAGGGGA 61.721 63.158 0.00 0.00 0.00 4.81
6695 15354 1.144936 GCTCGATGGACAAGGGGAG 59.855 63.158 0.00 0.00 0.00 4.30
6696 15355 1.330655 GCTCGATGGACAAGGGGAGA 61.331 60.000 0.00 0.00 0.00 3.71
6697 15356 1.418334 CTCGATGGACAAGGGGAGAT 58.582 55.000 0.00 0.00 0.00 2.75
6698 15357 1.765314 CTCGATGGACAAGGGGAGATT 59.235 52.381 0.00 0.00 0.00 2.40
6699 15358 2.171448 CTCGATGGACAAGGGGAGATTT 59.829 50.000 0.00 0.00 0.00 2.17
6700 15359 2.170607 TCGATGGACAAGGGGAGATTTC 59.829 50.000 0.00 0.00 0.00 2.17
6701 15360 2.746472 CGATGGACAAGGGGAGATTTCC 60.746 54.545 0.00 0.00 43.23 3.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.048713 GTGCACCAGACTTAGCTAAATTGTT 60.049 40.000 5.22 0.00 0.00 2.83
1 2 4.455877 GTGCACCAGACTTAGCTAAATTGT 59.544 41.667 5.22 1.95 0.00 2.71
2 3 4.455533 TGTGCACCAGACTTAGCTAAATTG 59.544 41.667 15.69 6.16 0.00 2.32
3 4 4.651778 TGTGCACCAGACTTAGCTAAATT 58.348 39.130 15.69 0.00 0.00 1.82
4 5 4.286297 TGTGCACCAGACTTAGCTAAAT 57.714 40.909 15.69 0.00 0.00 1.40
5 6 3.762407 TGTGCACCAGACTTAGCTAAA 57.238 42.857 15.69 0.00 0.00 1.85
7 8 3.762407 TTTGTGCACCAGACTTAGCTA 57.238 42.857 15.69 0.00 0.00 3.32
8 9 2.638480 TTTGTGCACCAGACTTAGCT 57.362 45.000 15.69 0.00 0.00 3.32
9 10 3.253188 TCATTTTGTGCACCAGACTTAGC 59.747 43.478 15.69 0.00 0.00 3.09
10 11 5.633830 ATCATTTTGTGCACCAGACTTAG 57.366 39.130 15.69 0.00 0.00 2.18
78 3873 2.420022 CCATGTCTTACCTTGGCGAAAG 59.580 50.000 0.00 0.00 35.47 2.62
197 3993 7.177832 TGAAATCCGGACTAACATCTAGAAA 57.822 36.000 6.12 0.00 0.00 2.52
202 3998 6.323996 TCTGTATGAAATCCGGACTAACATCT 59.676 38.462 6.12 0.00 0.00 2.90
212 4008 6.042638 ACTATCCATCTGTATGAAATCCGG 57.957 41.667 0.00 0.00 34.84 5.14
224 4020 4.631131 TGACCGCATTAACTATCCATCTG 58.369 43.478 0.00 0.00 0.00 2.90
225 4021 4.955811 TGACCGCATTAACTATCCATCT 57.044 40.909 0.00 0.00 0.00 2.90
226 4022 4.814234 TGTTGACCGCATTAACTATCCATC 59.186 41.667 0.00 0.00 0.00 3.51
290 4090 7.448469 ACAAGAGAAGTAATGCAAAGGTAATGT 59.552 33.333 0.00 0.00 0.00 2.71
292 4092 9.167311 CTACAAGAGAAGTAATGCAAAGGTAAT 57.833 33.333 0.00 0.00 0.00 1.89
299 4099 5.165961 AGGCTACAAGAGAAGTAATGCAA 57.834 39.130 0.00 0.00 0.00 4.08
310 4110 8.643324 ACTAACATATTTAGGAGGCTACAAGAG 58.357 37.037 0.00 0.00 0.00 2.85
351 4151 3.709141 TGTAGCTGCTCTCTCTCTCTCTA 59.291 47.826 4.91 0.00 0.00 2.43
369 4250 0.253610 TACCGCCCAACCCATTGTAG 59.746 55.000 0.00 0.00 33.60 2.74
395 4276 6.012745 AGATAAATTGTTCCCATATGCCTCC 58.987 40.000 0.00 0.00 0.00 4.30
427 4308 4.631377 TGAATCTTGCTACATTCAACCTCG 59.369 41.667 0.00 0.00 36.33 4.63
432 4313 4.379394 GCGGTTGAATCTTGCTACATTCAA 60.379 41.667 7.31 7.31 43.54 2.69
457 4338 6.763758 AGGGTTGTCCTTATGTCCTCAACAT 61.764 44.000 0.00 0.00 45.47 2.71
540 7707 2.460757 CCAACAAGGCCAAAATGGAG 57.539 50.000 5.01 0.00 40.96 3.86
569 7736 0.031994 AAATGCAAGCACCAACGACC 59.968 50.000 0.00 0.00 0.00 4.79
597 7764 8.208224 TGAATATCGCCTAAAAACCTGAGATAA 58.792 33.333 0.00 0.00 0.00 1.75
607 7774 7.768582 TCTCACTGAATGAATATCGCCTAAAAA 59.231 33.333 0.00 0.00 36.69 1.94
623 7790 3.942748 GGAGACGTCTACTCTCACTGAAT 59.057 47.826 21.00 0.00 36.61 2.57
653 7820 7.909861 ATGAAGTCATCACAGACGGATCTGC 62.910 48.000 0.00 0.00 43.72 4.26
658 7825 3.588955 CAATGAAGTCATCACAGACGGA 58.411 45.455 0.00 0.00 41.93 4.69
659 7826 2.674852 CCAATGAAGTCATCACAGACGG 59.325 50.000 0.00 0.00 41.93 4.79
678 7845 5.815581 AGCTGGTACATCATTTTAAGACCA 58.184 37.500 0.00 0.00 38.20 4.02
702 7869 7.012704 TCGTGAGTTAGTCTGTACAAGTAACTT 59.987 37.037 23.89 15.38 40.99 2.66
721 7888 4.699637 TGTGTTTGATTACCTTCGTGAGT 58.300 39.130 0.00 0.00 0.00 3.41
737 7904 9.965824 CTTTCCACTAAAATAACTCATGTGTTT 57.034 29.630 17.51 3.50 0.00 2.83
746 7914 4.076394 TGCCGCTTTCCACTAAAATAACT 58.924 39.130 0.00 0.00 0.00 2.24
747 7915 4.163552 GTGCCGCTTTCCACTAAAATAAC 58.836 43.478 0.00 0.00 0.00 1.89
875 8055 6.785191 TGGAGCGAAAATGATAATGTCTTTC 58.215 36.000 0.00 0.00 0.00 2.62
876 8056 6.757897 TGGAGCGAAAATGATAATGTCTTT 57.242 33.333 0.00 0.00 0.00 2.52
877 8057 6.757897 TTGGAGCGAAAATGATAATGTCTT 57.242 33.333 0.00 0.00 0.00 3.01
880 8060 7.156876 TCTTTTGGAGCGAAAATGATAATGT 57.843 32.000 0.00 0.00 0.00 2.71
881 8061 8.638685 AATCTTTTGGAGCGAAAATGATAATG 57.361 30.769 9.15 0.00 32.98 1.90
883 8063 8.303156 TGAAATCTTTTGGAGCGAAAATGATAA 58.697 29.630 9.15 0.00 32.98 1.75
884 8064 7.754924 GTGAAATCTTTTGGAGCGAAAATGATA 59.245 33.333 9.15 0.00 32.98 2.15
912 8146 2.254051 CCAAAAACATCGCGCCGT 59.746 55.556 0.00 0.00 0.00 5.68
935 8169 1.770110 TGGAGGGGAAGTGTGCTGT 60.770 57.895 0.00 0.00 0.00 4.40
1248 8517 1.202405 GGCGGCAGGATTTAACCAATG 60.202 52.381 3.07 0.00 0.00 2.82
1275 8544 3.869272 GGCGCGCACCAAGAGATG 61.869 66.667 34.42 0.00 0.00 2.90
1295 8564 0.938008 GAACCCAGAAATCGATCGGC 59.062 55.000 16.41 2.74 0.00 5.54
1305 8574 1.301401 CAGAACCGCGAACCCAGAA 60.301 57.895 8.23 0.00 0.00 3.02
1418 8688 4.027295 CGTAGCGCAGAGAGTAAATCAAAG 60.027 45.833 11.47 0.00 0.00 2.77
1464 8734 3.508744 AAAACACAGCAACAGTCCTTG 57.491 42.857 0.00 0.00 0.00 3.61
1535 8808 7.040478 TGCATCACAGTGACTAAAAGCTTATTT 60.040 33.333 5.05 0.00 0.00 1.40
1587 8860 1.327764 GTGGATTTCGGATCGTTCAGC 59.672 52.381 0.00 0.00 0.00 4.26
1590 8863 5.924475 ATAATGTGGATTTCGGATCGTTC 57.076 39.130 0.00 0.00 0.00 3.95
1594 8867 6.595326 TGCATCTATAATGTGGATTTCGGATC 59.405 38.462 0.00 0.00 0.00 3.36
1631 8904 3.303229 GTGTTCGCACAAAAAGAAAGTGG 59.697 43.478 0.00 0.00 46.85 4.00
1676 8949 8.677148 TCATAGCCACTATCAAGGATTAAAAC 57.323 34.615 0.00 0.00 0.00 2.43
1695 8968 1.279271 AGGTGACCAGTGGTTCATAGC 59.721 52.381 17.93 12.68 35.25 2.97
1700 8973 2.341846 TTTGAGGTGACCAGTGGTTC 57.658 50.000 17.93 10.58 35.25 3.62
1707 8980 4.437682 AGACAGAATTTTGAGGTGACCA 57.562 40.909 3.63 0.00 0.00 4.02
1722 8995 3.257469 CAGAGCTTGCCAATAGACAGA 57.743 47.619 0.00 0.00 0.00 3.41
1758 9031 3.471680 GGATACTGAGAATGAGGGCAAC 58.528 50.000 0.00 0.00 0.00 4.17
1815 9088 5.413309 AGAGAATGTAGGAACACAAGGAG 57.587 43.478 0.00 0.00 38.78 3.69
1854 9127 6.652481 CCAAAGTATCCAATCAGTATAGGCAG 59.348 42.308 0.00 0.00 0.00 4.85
1899 9175 3.253921 CAGCAACACAGAATGAATGGTGA 59.746 43.478 0.00 0.00 43.49 4.02
1958 9234 3.538634 AATACTTAGGACGCCAAGGTC 57.461 47.619 0.00 0.00 36.18 3.85
2009 9285 5.334646 GGAACGGAACTGGTACTGAAATTTC 60.335 44.000 11.41 11.41 0.00 2.17
2234 9544 3.614616 GCTCAACGGTTATTGTCTGAGAG 59.385 47.826 7.69 2.33 33.65 3.20
2402 9712 2.888414 TGGATTTTCCCTGGAAACGTTC 59.112 45.455 10.82 8.40 42.88 3.95
2444 9754 0.987294 CACATCCCTGGGAGTTCAGT 59.013 55.000 21.99 11.07 34.05 3.41
2445 9755 0.254178 CCACATCCCTGGGAGTTCAG 59.746 60.000 21.99 10.45 34.05 3.02
2583 9893 3.700539 TGAGTGTTTGGCCCAATATCATG 59.299 43.478 0.00 0.00 0.00 3.07
2664 9974 1.379044 CCAGGTGTTCATGCTCCCC 60.379 63.158 0.00 0.00 0.00 4.81
2705 10015 8.856153 TTACTGAGCAAATTGTATCCACTTTA 57.144 30.769 0.00 0.00 0.00 1.85
3128 10438 8.139989 GGTAACTCTGTTACTTCTGTAGTTTCA 58.860 37.037 16.76 0.00 38.33 2.69
3407 10825 1.289160 TAGATTGGGGCTCTGTGCTT 58.711 50.000 1.44 0.00 42.39 3.91
3547 10965 3.118738 ACGGACTGTGGACATATTTCTCC 60.119 47.826 0.00 0.00 0.00 3.71
3963 11404 6.708949 CACTAACCTCTAACAGTGGCTTTTTA 59.291 38.462 0.00 0.00 35.77 1.52
4000 11444 7.894708 TGATTTGACCAGAAATTTCAATGCTA 58.105 30.769 19.99 1.86 0.00 3.49
4026 11470 9.920946 TCTGCCACTATTTATTTTCTCCTATTT 57.079 29.630 0.00 0.00 0.00 1.40
4027 11471 9.566432 CTCTGCCACTATTTATTTTCTCCTATT 57.434 33.333 0.00 0.00 0.00 1.73
4034 11479 7.391148 TTGTCCTCTGCCACTATTTATTTTC 57.609 36.000 0.00 0.00 0.00 2.29
4109 11554 6.443849 ACTCTTCTACCCTACAATGGATTTCA 59.556 38.462 0.00 0.00 0.00 2.69
4332 11781 6.418057 AGAAATGAATGCAACAAAGGGTAA 57.582 33.333 0.00 0.00 0.00 2.85
4479 11959 6.293027 GGTCTCAGAATTTTTGGTGCAATTTG 60.293 38.462 0.00 0.00 0.00 2.32
4644 12408 2.867624 ACACAGGTGCACATCAAGATT 58.132 42.857 20.43 0.00 0.00 2.40
4645 12409 2.555325 CAACACAGGTGCACATCAAGAT 59.445 45.455 20.43 0.00 0.00 2.40
4671 12436 7.581011 AAATAAACTGGCAATCGTTCAATTC 57.419 32.000 0.00 0.00 0.00 2.17
4716 12481 6.875726 TGATGTCTAGAAGACCTTCAATTGTG 59.124 38.462 11.80 0.00 44.44 3.33
5005 12780 0.820891 ACCTGCAACAGTGGCAAGAG 60.821 55.000 5.45 0.00 41.39 2.85
5007 12782 0.461135 AAACCTGCAACAGTGGCAAG 59.539 50.000 3.61 0.00 41.39 4.01
5253 13030 5.099042 AGCGTGGACATATTTAAGGAGTT 57.901 39.130 0.00 0.00 0.00 3.01
5259 13036 4.161565 ACAGGAGAGCGTGGACATATTTAA 59.838 41.667 0.00 0.00 34.31 1.52
5271 13049 3.069079 TCAGTAACTACAGGAGAGCGT 57.931 47.619 0.00 0.00 0.00 5.07
5511 13290 2.125673 ATGTGCGTGCCGACCTAC 60.126 61.111 0.00 0.00 0.00 3.18
5623 13822 5.746952 GCATGAGATATCCCCTGAATGACAA 60.747 44.000 0.00 0.00 0.00 3.18
5653 13856 0.828022 CCGATGTTGCCTACACCCTA 59.172 55.000 0.00 0.00 40.19 3.53
5661 13864 0.598065 GCTTCAAACCGATGTTGCCT 59.402 50.000 0.00 0.00 34.13 4.75
5670 13873 4.614673 GCTGTGTGCTTCAAACCG 57.385 55.556 0.00 0.00 38.95 4.44
5717 13921 2.380084 TGTCTCGCGCCTTTAAGAAT 57.620 45.000 0.00 0.00 0.00 2.40
5718 13922 2.380084 ATGTCTCGCGCCTTTAAGAA 57.620 45.000 0.00 0.00 0.00 2.52
5729 13933 6.255237 GGGAGTAGTAAAAAGTAATGTCTCGC 59.745 42.308 0.00 0.00 0.00 5.03
5730 13934 7.545489 AGGGAGTAGTAAAAAGTAATGTCTCG 58.455 38.462 0.00 0.00 0.00 4.04
5763 13967 6.144402 TGAACTAAAACCACGACGAGTAAATC 59.856 38.462 0.00 0.00 0.00 2.17
5766 13970 4.930963 TGAACTAAAACCACGACGAGTAA 58.069 39.130 0.00 0.00 0.00 2.24
5769 13973 4.782252 TTTGAACTAAAACCACGACGAG 57.218 40.909 0.00 0.00 0.00 4.18
5771 13975 5.966503 TCAAATTTGAACTAAAACCACGACG 59.033 36.000 18.45 0.00 33.55 5.12
5785 13989 8.191446 TCATCGTGGTTTTAGTTCAAATTTGAA 58.809 29.630 26.01 26.01 44.31 2.69
5787 13991 7.647715 ACTCATCGTGGTTTTAGTTCAAATTTG 59.352 33.333 12.15 12.15 0.00 2.32
5794 13998 7.171434 CGATTTACTCATCGTGGTTTTAGTTC 58.829 38.462 0.00 0.00 41.03 3.01
5795 13999 6.091713 CCGATTTACTCATCGTGGTTTTAGTT 59.908 38.462 2.68 0.00 43.86 2.24
5797 14001 5.808540 TCCGATTTACTCATCGTGGTTTTAG 59.191 40.000 2.68 0.00 43.86 1.85
5799 14003 4.571919 TCCGATTTACTCATCGTGGTTTT 58.428 39.130 2.68 0.00 43.86 2.43
5803 14007 2.534349 CGTTCCGATTTACTCATCGTGG 59.466 50.000 2.68 0.00 43.86 4.94
5804 14008 2.534349 CCGTTCCGATTTACTCATCGTG 59.466 50.000 2.68 0.00 43.86 4.35
5806 14010 3.074504 TCCGTTCCGATTTACTCATCG 57.925 47.619 0.00 0.00 44.78 3.84
5809 14013 2.761767 TCCATCCGTTCCGATTTACTCA 59.238 45.455 0.00 0.00 0.00 3.41
5812 14016 3.175109 ACTCCATCCGTTCCGATTTAC 57.825 47.619 0.00 0.00 0.00 2.01
5815 14019 2.662866 TCTACTCCATCCGTTCCGATT 58.337 47.619 0.00 0.00 0.00 3.34
5816 14020 2.359981 TCTACTCCATCCGTTCCGAT 57.640 50.000 0.00 0.00 0.00 4.18
5817 14021 2.022195 CTTCTACTCCATCCGTTCCGA 58.978 52.381 0.00 0.00 0.00 4.55
5818 14022 1.067212 CCTTCTACTCCATCCGTTCCG 59.933 57.143 0.00 0.00 0.00 4.30
5827 14106 5.206587 GACCATACCTTACCTTCTACTCCA 58.793 45.833 0.00 0.00 0.00 3.86
5911 14488 1.813102 CCAGGCCCTCCTTAAGAGAT 58.187 55.000 3.36 0.00 46.50 2.75
5924 14501 2.923276 CTCCTTAAGAGAGGCCAGGCC 61.923 61.905 24.90 24.90 46.50 5.19
5934 14511 6.568869 CAGTGGTTGAGTATCTCCTTAAGAG 58.431 44.000 3.36 0.00 44.75 2.85
5935 14512 5.105310 GCAGTGGTTGAGTATCTCCTTAAGA 60.105 44.000 3.36 0.00 38.72 2.10
5938 14515 3.451178 GGCAGTGGTTGAGTATCTCCTTA 59.549 47.826 0.00 0.00 34.92 2.69
5939 14516 2.237392 GGCAGTGGTTGAGTATCTCCTT 59.763 50.000 0.00 0.00 34.92 3.36
5940 14517 1.834263 GGCAGTGGTTGAGTATCTCCT 59.166 52.381 0.00 0.00 34.92 3.69
5941 14518 1.834263 AGGCAGTGGTTGAGTATCTCC 59.166 52.381 0.00 0.00 34.92 3.71
5942 14519 2.763448 AGAGGCAGTGGTTGAGTATCTC 59.237 50.000 0.00 0.00 34.92 2.75
5943 14520 2.826488 AGAGGCAGTGGTTGAGTATCT 58.174 47.619 0.00 0.00 34.92 1.98
5944 14521 3.181474 GGTAGAGGCAGTGGTTGAGTATC 60.181 52.174 0.00 0.00 0.00 2.24
5951 14528 1.729586 TCAAGGTAGAGGCAGTGGTT 58.270 50.000 0.00 0.00 0.00 3.67
5954 14531 3.529533 CTCATTCAAGGTAGAGGCAGTG 58.470 50.000 0.00 0.00 0.00 3.66
5987 14564 5.122711 CACATGCATTGTTCTCTACACATGA 59.877 40.000 0.00 0.00 39.39 3.07
5995 14572 5.748402 TCTAATCCACATGCATTGTTCTCT 58.252 37.500 0.00 0.00 36.00 3.10
5996 14573 5.505324 GCTCTAATCCACATGCATTGTTCTC 60.505 44.000 0.00 0.00 36.00 2.87
6011 14588 1.576356 CTCGCCAACTGCTCTAATCC 58.424 55.000 0.00 0.00 38.05 3.01
6027 14604 1.376424 ACCATGAAGGCACAGCTCG 60.376 57.895 0.00 0.00 43.14 5.03
6028 14605 1.310933 CCACCATGAAGGCACAGCTC 61.311 60.000 0.00 0.00 43.14 4.09
6029 14606 1.303888 CCACCATGAAGGCACAGCT 60.304 57.895 0.00 0.00 43.14 4.24
6030 14607 3.281240 CCACCATGAAGGCACAGC 58.719 61.111 0.00 0.00 43.14 4.40
6038 14615 4.738998 CGCCCCTGCCACCATGAA 62.739 66.667 0.00 0.00 0.00 2.57
6048 14625 2.843912 AATTCCTTGCTCCGCCCCTG 62.844 60.000 0.00 0.00 0.00 4.45
6049 14626 1.279025 TAATTCCTTGCTCCGCCCCT 61.279 55.000 0.00 0.00 0.00 4.79
6051 14628 0.180406 TCTAATTCCTTGCTCCGCCC 59.820 55.000 0.00 0.00 0.00 6.13
6055 14632 4.061596 CCTCGATTCTAATTCCTTGCTCC 58.938 47.826 0.00 0.00 0.00 4.70
6056 14633 4.061596 CCCTCGATTCTAATTCCTTGCTC 58.938 47.826 0.00 0.00 0.00 4.26
6057 14634 3.711704 TCCCTCGATTCTAATTCCTTGCT 59.288 43.478 0.00 0.00 0.00 3.91
6059 14636 5.537300 TCTCCCTCGATTCTAATTCCTTG 57.463 43.478 0.00 0.00 0.00 3.61
6060 14637 5.841237 TCATCTCCCTCGATTCTAATTCCTT 59.159 40.000 0.00 0.00 0.00 3.36
6061 14638 5.398236 TCATCTCCCTCGATTCTAATTCCT 58.602 41.667 0.00 0.00 0.00 3.36
6062 14639 5.719173 CTCATCTCCCTCGATTCTAATTCC 58.281 45.833 0.00 0.00 0.00 3.01
6063 14640 5.167845 GCTCATCTCCCTCGATTCTAATTC 58.832 45.833 0.00 0.00 0.00 2.17
6064 14641 4.590647 TGCTCATCTCCCTCGATTCTAATT 59.409 41.667 0.00 0.00 0.00 1.40
6066 14643 3.566351 TGCTCATCTCCCTCGATTCTAA 58.434 45.455 0.00 0.00 0.00 2.10
6067 14644 3.229697 TGCTCATCTCCCTCGATTCTA 57.770 47.619 0.00 0.00 0.00 2.10
6068 14645 2.079170 TGCTCATCTCCCTCGATTCT 57.921 50.000 0.00 0.00 0.00 2.40
6069 14646 2.363680 TCTTGCTCATCTCCCTCGATTC 59.636 50.000 0.00 0.00 0.00 2.52
6070 14647 2.102252 GTCTTGCTCATCTCCCTCGATT 59.898 50.000 0.00 0.00 0.00 3.34
6071 14648 1.686052 GTCTTGCTCATCTCCCTCGAT 59.314 52.381 0.00 0.00 0.00 3.59
6073 14650 0.820226 TGTCTTGCTCATCTCCCTCG 59.180 55.000 0.00 0.00 0.00 4.63
6075 14652 1.554160 CTGTGTCTTGCTCATCTCCCT 59.446 52.381 0.00 0.00 0.00 4.20
6076 14653 1.552337 TCTGTGTCTTGCTCATCTCCC 59.448 52.381 0.00 0.00 0.00 4.30
6095 14750 8.358148 TCTCCTCAAGTATAAATCCGTAACATC 58.642 37.037 0.00 0.00 0.00 3.06
6120 14775 4.336532 AACGTGTGTTGTCTTTGTCTTC 57.663 40.909 0.00 0.00 36.81 2.87
6125 14780 5.747565 ACATCATAACGTGTGTTGTCTTTG 58.252 37.500 10.46 0.00 39.12 2.77
6134 14789 5.168569 AGACTTGGTACATCATAACGTGTG 58.831 41.667 0.00 0.00 39.30 3.82
6161 14816 8.900781 TGGTTGGCTATCTATACGTTATCTATC 58.099 37.037 0.00 0.00 0.00 2.08
6163 14818 8.818622 ATGGTTGGCTATCTATACGTTATCTA 57.181 34.615 0.00 0.00 0.00 1.98
6192 14847 9.979578 TGTATTTTTGTTTCAGAAGCATGTATT 57.020 25.926 0.00 0.00 0.00 1.89
6240 14895 2.216046 CAACTAGCGATGCATGACCAT 58.784 47.619 2.46 0.00 0.00 3.55
6241 14896 1.066215 ACAACTAGCGATGCATGACCA 60.066 47.619 2.46 0.00 0.00 4.02
6250 14905 6.405619 GGAAAGAAGTACCTACAACTAGCGAT 60.406 42.308 0.00 0.00 0.00 4.58
6266 14921 5.607477 TGATCGTTAGTGTTGGAAAGAAGT 58.393 37.500 0.00 0.00 0.00 3.01
6284 14942 3.615056 ACAATTGTTGCATTGCATGATCG 59.385 39.130 12.95 2.85 38.76 3.69
6296 14954 7.995998 CGTGTGTTATTTAGAAACAATTGTTGC 59.004 33.333 23.93 21.96 38.50 4.17
6337 14996 9.569122 AATTACTGACTACCAGCTAAAGAAAAA 57.431 29.630 0.00 0.00 46.81 1.94
6339 14998 9.871238 CTAATTACTGACTACCAGCTAAAGAAA 57.129 33.333 0.00 0.00 46.81 2.52
6340 14999 9.032624 ACTAATTACTGACTACCAGCTAAAGAA 57.967 33.333 0.00 0.00 46.81 2.52
6341 15000 8.591114 ACTAATTACTGACTACCAGCTAAAGA 57.409 34.615 0.00 0.00 46.81 2.52
6342 15001 9.953697 CTACTAATTACTGACTACCAGCTAAAG 57.046 37.037 0.00 0.00 46.81 1.85
6343 15002 9.690913 TCTACTAATTACTGACTACCAGCTAAA 57.309 33.333 0.00 0.00 46.81 1.85
6344 15003 9.863650 ATCTACTAATTACTGACTACCAGCTAA 57.136 33.333 0.00 0.00 46.81 3.09
6345 15004 9.504708 GATCTACTAATTACTGACTACCAGCTA 57.495 37.037 0.00 0.00 46.81 3.32
6346 15005 7.999545 TGATCTACTAATTACTGACTACCAGCT 59.000 37.037 0.00 0.00 46.81 4.24
6347 15006 8.167605 TGATCTACTAATTACTGACTACCAGC 57.832 38.462 0.00 0.00 46.81 4.85
6394 15053 9.606631 GTAGCCACTAGTACTTAGTCTACTTAA 57.393 37.037 0.00 0.00 40.68 1.85
6395 15054 8.986991 AGTAGCCACTAGTACTTAGTCTACTTA 58.013 37.037 0.00 0.00 42.05 2.24
6396 15055 7.860584 AGTAGCCACTAGTACTTAGTCTACTT 58.139 38.462 0.00 1.29 42.05 2.24
6397 15056 7.436320 AGTAGCCACTAGTACTTAGTCTACT 57.564 40.000 0.00 12.34 41.06 2.57
6398 15057 8.816640 CTAGTAGCCACTAGTACTTAGTCTAC 57.183 42.308 10.80 10.63 46.30 2.59
6411 15070 3.784511 ATCTACCGCTAGTAGCCACTA 57.215 47.619 16.51 2.74 46.98 2.74
6412 15071 2.660670 ATCTACCGCTAGTAGCCACT 57.339 50.000 16.51 1.66 46.98 4.00
6413 15072 3.181478 ACAAATCTACCGCTAGTAGCCAC 60.181 47.826 16.51 0.00 46.98 5.01
6414 15073 3.028850 ACAAATCTACCGCTAGTAGCCA 58.971 45.455 16.51 1.37 46.98 4.75
6415 15074 3.181478 ACACAAATCTACCGCTAGTAGCC 60.181 47.826 16.51 0.00 46.98 3.93
6416 15075 4.043037 ACACAAATCTACCGCTAGTAGC 57.957 45.455 12.41 12.41 46.98 3.58
6418 15077 5.297776 GGTCTACACAAATCTACCGCTAGTA 59.702 44.000 0.00 0.00 0.00 1.82
6419 15078 4.097589 GGTCTACACAAATCTACCGCTAGT 59.902 45.833 0.00 0.00 0.00 2.57
6420 15079 4.608951 GGTCTACACAAATCTACCGCTAG 58.391 47.826 0.00 0.00 0.00 3.42
6421 15080 3.065786 CGGTCTACACAAATCTACCGCTA 59.934 47.826 0.00 0.00 42.75 4.26
6422 15081 2.159282 CGGTCTACACAAATCTACCGCT 60.159 50.000 0.00 0.00 42.75 5.52
6423 15082 2.190981 CGGTCTACACAAATCTACCGC 58.809 52.381 0.00 0.00 42.75 5.68
6425 15084 5.282510 CAGATCGGTCTACACAAATCTACC 58.717 45.833 0.00 0.00 32.09 3.18
6426 15085 5.282510 CCAGATCGGTCTACACAAATCTAC 58.717 45.833 0.00 0.00 32.09 2.59
6427 15086 4.202121 GCCAGATCGGTCTACACAAATCTA 60.202 45.833 0.00 0.00 36.97 1.98
6428 15087 3.430929 GCCAGATCGGTCTACACAAATCT 60.431 47.826 0.00 0.00 36.97 2.40
6429 15088 2.866762 GCCAGATCGGTCTACACAAATC 59.133 50.000 0.00 0.00 36.97 2.17
6430 15089 2.501723 AGCCAGATCGGTCTACACAAAT 59.498 45.455 0.00 0.00 36.97 2.32
6431 15090 1.899814 AGCCAGATCGGTCTACACAAA 59.100 47.619 0.00 0.00 36.97 2.83
6432 15091 1.557099 AGCCAGATCGGTCTACACAA 58.443 50.000 0.00 0.00 36.97 3.33
6433 15092 1.557099 AAGCCAGATCGGTCTACACA 58.443 50.000 0.00 0.00 36.97 3.72
6434 15093 2.674796 AAAGCCAGATCGGTCTACAC 57.325 50.000 0.00 0.00 36.97 2.90
6435 15094 4.811969 TTTAAAGCCAGATCGGTCTACA 57.188 40.909 0.00 0.00 36.97 2.74
6436 15095 5.176592 AGTTTTAAAGCCAGATCGGTCTAC 58.823 41.667 0.00 0.00 36.97 2.59
6437 15096 5.187186 AGAGTTTTAAAGCCAGATCGGTCTA 59.813 40.000 0.00 0.00 36.97 2.59
6438 15097 4.020128 AGAGTTTTAAAGCCAGATCGGTCT 60.020 41.667 0.00 0.00 36.97 3.85
6439 15098 4.254492 AGAGTTTTAAAGCCAGATCGGTC 58.746 43.478 0.00 0.00 36.97 4.79
6440 15099 4.287766 AGAGTTTTAAAGCCAGATCGGT 57.712 40.909 0.00 0.00 36.97 4.69
6441 15100 6.737254 TTAAGAGTTTTAAAGCCAGATCGG 57.263 37.500 0.00 0.00 38.11 4.18
6442 15101 8.450964 TCATTTAAGAGTTTTAAAGCCAGATCG 58.549 33.333 5.04 0.00 0.00 3.69
6453 15112 9.290988 TGTGGCACTTATCATTTAAGAGTTTTA 57.709 29.630 19.83 0.00 0.00 1.52
6454 15113 8.177119 TGTGGCACTTATCATTTAAGAGTTTT 57.823 30.769 19.83 0.00 0.00 2.43
6455 15114 7.759489 TGTGGCACTTATCATTTAAGAGTTT 57.241 32.000 19.83 0.00 0.00 2.66
6456 15115 7.448469 ACTTGTGGCACTTATCATTTAAGAGTT 59.552 33.333 19.83 0.00 0.00 3.01
6457 15116 6.942576 ACTTGTGGCACTTATCATTTAAGAGT 59.057 34.615 19.83 0.00 0.00 3.24
6458 15117 7.119699 TGACTTGTGGCACTTATCATTTAAGAG 59.880 37.037 19.83 0.00 0.00 2.85
6459 15118 6.939730 TGACTTGTGGCACTTATCATTTAAGA 59.060 34.615 19.83 0.00 0.00 2.10
6460 15119 7.144722 TGACTTGTGGCACTTATCATTTAAG 57.855 36.000 19.83 12.40 0.00 1.85
6461 15120 6.150976 CCTGACTTGTGGCACTTATCATTTAA 59.849 38.462 19.83 0.01 0.00 1.52
6462 15121 5.647658 CCTGACTTGTGGCACTTATCATTTA 59.352 40.000 19.83 0.00 0.00 1.40
6463 15122 4.460382 CCTGACTTGTGGCACTTATCATTT 59.540 41.667 19.83 0.00 0.00 2.32
6464 15123 4.012374 CCTGACTTGTGGCACTTATCATT 58.988 43.478 19.83 0.00 0.00 2.57
6465 15124 3.009473 ACCTGACTTGTGGCACTTATCAT 59.991 43.478 19.83 3.00 0.00 2.45
6466 15125 2.371841 ACCTGACTTGTGGCACTTATCA 59.628 45.455 19.83 16.63 0.00 2.15
6467 15126 2.744202 CACCTGACTTGTGGCACTTATC 59.256 50.000 19.83 13.04 0.00 1.75
6468 15127 2.106511 ACACCTGACTTGTGGCACTTAT 59.893 45.455 19.83 3.35 38.05 1.73
6469 15128 1.488812 ACACCTGACTTGTGGCACTTA 59.511 47.619 19.83 6.03 38.05 2.24
6470 15129 0.255890 ACACCTGACTTGTGGCACTT 59.744 50.000 19.83 2.72 38.05 3.16
6471 15130 0.464373 CACACCTGACTTGTGGCACT 60.464 55.000 19.83 0.00 40.66 4.40
6472 15131 2.024918 CACACCTGACTTGTGGCAC 58.975 57.895 11.55 11.55 40.66 5.01
6473 15132 4.557554 CACACCTGACTTGTGGCA 57.442 55.556 0.00 0.00 40.66 4.92
6477 15136 0.748005 GTGCCACACACCTGACTTGT 60.748 55.000 0.00 0.00 44.02 3.16
6478 15137 2.024918 GTGCCACACACCTGACTTG 58.975 57.895 0.00 0.00 44.02 3.16
6479 15138 4.559502 GTGCCACACACCTGACTT 57.440 55.556 0.00 0.00 44.02 3.01
6487 15146 2.439960 AAGACCGGAGTGCCACACA 61.440 57.895 9.46 0.00 36.74 3.72
6488 15147 1.961277 CAAGACCGGAGTGCCACAC 60.961 63.158 9.46 0.00 34.10 3.82
6489 15148 2.137528 TCAAGACCGGAGTGCCACA 61.138 57.895 9.46 0.00 0.00 4.17
6490 15149 1.668151 GTCAAGACCGGAGTGCCAC 60.668 63.158 9.46 0.00 0.00 5.01
6491 15150 2.741092 GTCAAGACCGGAGTGCCA 59.259 61.111 9.46 0.00 0.00 4.92
6492 15151 2.432628 CGTCAAGACCGGAGTGCC 60.433 66.667 9.46 0.00 0.00 5.01
6493 15152 0.878961 AAACGTCAAGACCGGAGTGC 60.879 55.000 9.46 0.00 0.00 4.40
6494 15153 1.578583 AAAACGTCAAGACCGGAGTG 58.421 50.000 9.46 2.45 0.00 3.51
6495 15154 2.320745 AAAAACGTCAAGACCGGAGT 57.679 45.000 9.46 0.00 0.00 3.85
6511 15170 7.913674 AAACAACTAGAATTGCCAACAAAAA 57.086 28.000 0.00 0.00 39.77 1.94
6512 15171 7.604164 TCAAAACAACTAGAATTGCCAACAAAA 59.396 29.630 0.00 0.00 39.77 2.44
6513 15172 7.099764 TCAAAACAACTAGAATTGCCAACAAA 58.900 30.769 0.00 0.00 39.77 2.83
6514 15173 6.634805 TCAAAACAACTAGAATTGCCAACAA 58.365 32.000 0.00 0.00 40.87 2.83
6515 15174 6.214191 TCAAAACAACTAGAATTGCCAACA 57.786 33.333 0.00 0.00 32.47 3.33
6516 15175 7.437862 TGATTCAAAACAACTAGAATTGCCAAC 59.562 33.333 0.00 0.00 31.35 3.77
6517 15176 7.495901 TGATTCAAAACAACTAGAATTGCCAA 58.504 30.769 0.00 0.00 31.35 4.52
6518 15177 7.014134 TCTGATTCAAAACAACTAGAATTGCCA 59.986 33.333 0.00 0.00 31.35 4.92
6519 15178 7.327032 GTCTGATTCAAAACAACTAGAATTGCC 59.673 37.037 0.00 0.00 31.35 4.52
6520 15179 7.862372 TGTCTGATTCAAAACAACTAGAATTGC 59.138 33.333 0.00 0.00 31.35 3.56
6521 15180 9.734620 TTGTCTGATTCAAAACAACTAGAATTG 57.265 29.630 0.00 0.00 31.35 2.32
6523 15182 9.736023 GTTTGTCTGATTCAAAACAACTAGAAT 57.264 29.630 11.73 0.00 36.71 2.40
6524 15183 7.908082 CGTTTGTCTGATTCAAAACAACTAGAA 59.092 33.333 11.73 0.00 36.71 2.10
6525 15184 7.279090 TCGTTTGTCTGATTCAAAACAACTAGA 59.721 33.333 11.73 9.47 36.71 2.43
6526 15185 7.406553 TCGTTTGTCTGATTCAAAACAACTAG 58.593 34.615 11.73 0.00 36.71 2.57
6527 15186 7.310072 TCGTTTGTCTGATTCAAAACAACTA 57.690 32.000 11.73 0.23 36.71 2.24
6528 15187 6.189677 TCGTTTGTCTGATTCAAAACAACT 57.810 33.333 11.73 0.00 36.71 3.16
6529 15188 6.690957 TGATCGTTTGTCTGATTCAAAACAAC 59.309 34.615 11.73 8.04 36.71 3.32
6530 15189 6.790282 TGATCGTTTGTCTGATTCAAAACAA 58.210 32.000 11.16 10.20 36.71 2.83
6531 15190 6.370433 TGATCGTTTGTCTGATTCAAAACA 57.630 33.333 11.16 5.66 36.71 2.83
6532 15191 7.805071 AGATTGATCGTTTGTCTGATTCAAAAC 59.195 33.333 3.40 3.40 36.71 2.43
6533 15192 7.874940 AGATTGATCGTTTGTCTGATTCAAAA 58.125 30.769 0.00 0.00 36.71 2.44
6534 15193 7.439157 AGATTGATCGTTTGTCTGATTCAAA 57.561 32.000 0.00 0.00 33.28 2.69
6535 15194 7.300320 CAAGATTGATCGTTTGTCTGATTCAA 58.700 34.615 0.00 0.00 0.00 2.69
6536 15195 6.128200 CCAAGATTGATCGTTTGTCTGATTCA 60.128 38.462 0.00 0.00 0.00 2.57
6537 15196 6.253746 CCAAGATTGATCGTTTGTCTGATTC 58.746 40.000 0.00 0.00 0.00 2.52
6538 15197 5.392380 GCCAAGATTGATCGTTTGTCTGATT 60.392 40.000 0.00 0.00 0.00 2.57
6539 15198 4.095483 GCCAAGATTGATCGTTTGTCTGAT 59.905 41.667 0.00 0.00 0.00 2.90
6540 15199 3.436704 GCCAAGATTGATCGTTTGTCTGA 59.563 43.478 0.00 0.00 0.00 3.27
6541 15200 3.725895 CGCCAAGATTGATCGTTTGTCTG 60.726 47.826 0.00 0.00 0.00 3.51
6542 15201 2.416547 CGCCAAGATTGATCGTTTGTCT 59.583 45.455 0.00 0.00 0.00 3.41
6543 15202 2.415168 TCGCCAAGATTGATCGTTTGTC 59.585 45.455 0.00 0.00 0.00 3.18
6544 15203 2.422597 TCGCCAAGATTGATCGTTTGT 58.577 42.857 0.00 0.00 0.00 2.83
6545 15204 3.357021 CATCGCCAAGATTGATCGTTTG 58.643 45.455 0.00 0.00 37.52 2.93
6546 15205 2.355756 CCATCGCCAAGATTGATCGTTT 59.644 45.455 0.00 0.00 37.52 3.60
6547 15206 1.942657 CCATCGCCAAGATTGATCGTT 59.057 47.619 0.00 0.00 37.52 3.85
6548 15207 1.134401 ACCATCGCCAAGATTGATCGT 60.134 47.619 0.00 0.00 37.52 3.73
6549 15208 1.586422 ACCATCGCCAAGATTGATCG 58.414 50.000 0.00 0.00 37.52 3.69
6550 15209 3.876914 TGTAACCATCGCCAAGATTGATC 59.123 43.478 0.00 0.00 37.52 2.92
6551 15210 3.884895 TGTAACCATCGCCAAGATTGAT 58.115 40.909 0.00 0.00 37.52 2.57
6552 15211 3.342377 TGTAACCATCGCCAAGATTGA 57.658 42.857 0.00 0.00 37.52 2.57
6553 15212 3.181497 CCTTGTAACCATCGCCAAGATTG 60.181 47.826 0.00 0.00 37.52 2.67
6554 15213 3.016736 CCTTGTAACCATCGCCAAGATT 58.983 45.455 0.00 0.00 37.52 2.40
6555 15214 2.643551 CCTTGTAACCATCGCCAAGAT 58.356 47.619 0.00 0.00 41.01 2.40
6556 15215 1.339631 CCCTTGTAACCATCGCCAAGA 60.340 52.381 0.00 0.00 37.14 3.02
6557 15216 1.094785 CCCTTGTAACCATCGCCAAG 58.905 55.000 0.00 0.00 35.26 3.61
6558 15217 0.322997 CCCCTTGTAACCATCGCCAA 60.323 55.000 0.00 0.00 0.00 4.52
6559 15218 1.301623 CCCCTTGTAACCATCGCCA 59.698 57.895 0.00 0.00 0.00 5.69
6560 15219 1.453197 CCCCCTTGTAACCATCGCC 60.453 63.158 0.00 0.00 0.00 5.54
6561 15220 4.235731 CCCCCTTGTAACCATCGC 57.764 61.111 0.00 0.00 0.00 4.58
6575 15234 3.332968 TCCAAGGGAGATATAAACCCCC 58.667 50.000 0.00 0.00 44.21 5.40
6588 15247 1.241990 CGTCGTGTCTCTCCAAGGGA 61.242 60.000 0.00 0.00 0.00 4.20
6589 15248 1.213013 CGTCGTGTCTCTCCAAGGG 59.787 63.158 0.00 0.00 0.00 3.95
6590 15249 1.213013 CCGTCGTGTCTCTCCAAGG 59.787 63.158 0.00 0.00 0.00 3.61
6591 15250 0.109689 GACCGTCGTGTCTCTCCAAG 60.110 60.000 6.61 0.00 32.39 3.61
6592 15251 1.521450 GGACCGTCGTGTCTCTCCAA 61.521 60.000 11.83 0.00 35.54 3.53
6593 15252 1.970114 GGACCGTCGTGTCTCTCCA 60.970 63.158 11.83 0.00 35.54 3.86
6594 15253 1.924320 CTGGACCGTCGTGTCTCTCC 61.924 65.000 11.83 0.00 35.54 3.71
6595 15254 0.954449 TCTGGACCGTCGTGTCTCTC 60.954 60.000 11.83 0.15 35.54 3.20
6596 15255 0.956410 CTCTGGACCGTCGTGTCTCT 60.956 60.000 11.83 0.00 35.54 3.10
6597 15256 1.502640 CTCTGGACCGTCGTGTCTC 59.497 63.158 11.83 5.25 35.54 3.36
6598 15257 1.972223 CCTCTGGACCGTCGTGTCT 60.972 63.158 11.83 0.00 35.54 3.41
6599 15258 1.924320 CTCCTCTGGACCGTCGTGTC 61.924 65.000 5.57 5.57 34.42 3.67
6600 15259 1.972223 CTCCTCTGGACCGTCGTGT 60.972 63.158 0.00 0.00 0.00 4.49
6601 15260 2.701780 CCTCCTCTGGACCGTCGTG 61.702 68.421 0.00 0.00 0.00 4.35
6602 15261 2.361357 CCTCCTCTGGACCGTCGT 60.361 66.667 0.00 0.00 0.00 4.34
6603 15262 3.141488 CCCTCCTCTGGACCGTCG 61.141 72.222 0.00 0.00 0.00 5.12
6604 15263 2.053277 GTCCCTCCTCTGGACCGTC 61.053 68.421 0.00 0.00 45.38 4.79
6605 15264 2.037527 GTCCCTCCTCTGGACCGT 59.962 66.667 0.00 0.00 45.38 4.83
6609 15268 4.361971 ACGCGTCCCTCCTCTGGA 62.362 66.667 5.58 0.00 0.00 3.86
6610 15269 3.827898 GACGCGTCCCTCCTCTGG 61.828 72.222 28.61 0.00 0.00 3.86
6611 15270 4.180946 CGACGCGTCCCTCCTCTG 62.181 72.222 31.84 12.61 0.00 3.35
6615 15274 4.790861 GAACCGACGCGTCCCTCC 62.791 72.222 31.84 15.85 0.00 4.30
6616 15275 4.790861 GGAACCGACGCGTCCCTC 62.791 72.222 31.84 23.54 0.00 4.30
6622 15281 4.796231 CTCCCTGGAACCGACGCG 62.796 72.222 3.53 3.53 0.00 6.01
6623 15282 3.379445 TCTCCCTGGAACCGACGC 61.379 66.667 0.00 0.00 0.00 5.19
6624 15283 2.572284 GTCTCCCTGGAACCGACG 59.428 66.667 0.00 0.00 0.00 5.12
6625 15284 2.572284 CGTCTCCCTGGAACCGAC 59.428 66.667 0.00 0.00 0.00 4.79
6626 15285 2.678934 CCGTCTCCCTGGAACCGA 60.679 66.667 0.00 0.00 0.00 4.69
6627 15286 4.452733 GCCGTCTCCCTGGAACCG 62.453 72.222 0.00 0.00 0.00 4.44
6628 15287 4.452733 CGCCGTCTCCCTGGAACC 62.453 72.222 0.00 0.00 0.00 3.62
6629 15288 3.379445 TCGCCGTCTCCCTGGAAC 61.379 66.667 0.00 0.00 0.00 3.62
6630 15289 3.379445 GTCGCCGTCTCCCTGGAA 61.379 66.667 0.00 0.00 0.00 3.53
6635 15294 4.790861 GAACCGTCGCCGTCTCCC 62.791 72.222 0.00 0.00 0.00 4.30
6645 15304 1.931172 CTCTCTCTCTCTCGAACCGTC 59.069 57.143 0.00 0.00 0.00 4.79
6646 15305 1.551430 TCTCTCTCTCTCTCGAACCGT 59.449 52.381 0.00 0.00 0.00 4.83
6647 15306 2.201732 CTCTCTCTCTCTCTCGAACCG 58.798 57.143 0.00 0.00 0.00 4.44
6648 15307 1.940613 GCTCTCTCTCTCTCTCGAACC 59.059 57.143 0.00 0.00 0.00 3.62
6649 15308 2.627945 TGCTCTCTCTCTCTCTCGAAC 58.372 52.381 0.00 0.00 0.00 3.95
6650 15309 3.006940 GTTGCTCTCTCTCTCTCTCGAA 58.993 50.000 0.00 0.00 0.00 3.71
6651 15310 2.627945 GTTGCTCTCTCTCTCTCTCGA 58.372 52.381 0.00 0.00 0.00 4.04
6652 15311 1.670811 GGTTGCTCTCTCTCTCTCTCG 59.329 57.143 0.00 0.00 0.00 4.04
6667 15326 4.505217 CATCGAGCGCACGGTTGC 62.505 66.667 26.30 0.00 46.21 4.17
6668 15327 3.853330 CCATCGAGCGCACGGTTG 61.853 66.667 26.30 21.81 0.00 3.77
6669 15328 4.063967 TCCATCGAGCGCACGGTT 62.064 61.111 26.30 12.15 0.00 4.44
6670 15329 4.796231 GTCCATCGAGCGCACGGT 62.796 66.667 26.30 18.13 0.00 4.83
6671 15330 4.794439 TGTCCATCGAGCGCACGG 62.794 66.667 26.30 11.66 0.00 4.94
6672 15331 2.792290 CTTGTCCATCGAGCGCACG 61.792 63.158 21.48 21.48 0.00 5.34
6673 15332 2.456119 CCTTGTCCATCGAGCGCAC 61.456 63.158 11.47 0.96 0.00 5.34
6674 15333 2.125552 CCTTGTCCATCGAGCGCA 60.126 61.111 11.47 0.00 0.00 6.09
6675 15334 2.892425 CCCTTGTCCATCGAGCGC 60.892 66.667 0.00 0.00 0.00 5.92
6676 15335 2.202932 CCCCTTGTCCATCGAGCG 60.203 66.667 0.00 0.00 0.00 5.03
6677 15336 1.144936 CTCCCCTTGTCCATCGAGC 59.855 63.158 0.00 0.00 0.00 5.03
6678 15337 1.418334 ATCTCCCCTTGTCCATCGAG 58.582 55.000 0.00 0.00 0.00 4.04
6679 15338 1.879575 AATCTCCCCTTGTCCATCGA 58.120 50.000 0.00 0.00 0.00 3.59
6680 15339 2.565841 GAAATCTCCCCTTGTCCATCG 58.434 52.381 0.00 0.00 0.00 3.84
6681 15340 2.937519 GGAAATCTCCCCTTGTCCATC 58.062 52.381 0.00 0.00 35.42 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.