Multiple sequence alignment - TraesCS3A01G472300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G472300 chr3A 100.000 3275 0 0 1 3275 703394153 703397427 0.000000e+00 6048.0
1 TraesCS3A01G472300 chr3A 79.552 1697 218 71 602 2259 655637450 655635844 0.000000e+00 1092.0
2 TraesCS3A01G472300 chr3A 77.383 1154 218 29 1080 2227 703170855 703171971 0.000000e+00 645.0
3 TraesCS3A01G472300 chr3A 91.667 156 11 2 4 157 380908700 380908855 7.120000e-52 215.0
4 TraesCS3A01G472300 chr3A 97.826 92 2 0 1 92 703387058 703387149 3.380000e-35 159.0
5 TraesCS3A01G472300 chr3A 88.000 50 4 2 1609 1657 688597184 688597232 1.270000e-04 58.4
6 TraesCS3A01G472300 chr3D 92.009 2290 115 34 607 2847 570558782 570561052 0.000000e+00 3153.0
7 TraesCS3A01G472300 chr3D 83.577 1230 154 28 1045 2259 520191882 520190686 0.000000e+00 1109.0
8 TraesCS3A01G472300 chr3D 78.472 1217 214 34 1046 2247 570496349 570495166 0.000000e+00 752.0
9 TraesCS3A01G472300 chr3D 77.506 1267 228 37 997 2257 570379584 570380799 0.000000e+00 708.0
10 TraesCS3A01G472300 chr3D 78.114 1156 207 30 1080 2227 570281108 570282225 0.000000e+00 691.0
11 TraesCS3A01G472300 chr3D 76.110 1126 218 36 1100 2214 570311115 570312200 2.870000e-150 542.0
12 TraesCS3A01G472300 chr3D 78.503 521 92 15 1045 1558 570401307 570400800 1.130000e-84 324.0
13 TraesCS3A01G472300 chr3D 84.348 115 12 5 159 269 570558490 570558602 1.240000e-19 108.0
14 TraesCS3A01G472300 chr3D 80.921 152 12 9 582 720 520192359 520192212 1.610000e-18 104.0
15 TraesCS3A01G472300 chr3B 91.586 2175 104 33 467 2605 757807111 757809242 0.000000e+00 2929.0
16 TraesCS3A01G472300 chr3B 79.930 1714 212 67 584 2259 685039648 685038029 0.000000e+00 1138.0
17 TraesCS3A01G472300 chr3B 78.939 1244 221 34 1045 2275 757773393 757772178 0.000000e+00 808.0
18 TraesCS3A01G472300 chr3B 96.970 33 1 0 1609 1641 731136066 731136098 4.570000e-04 56.5
19 TraesCS3A01G472300 chr3B 96.970 33 1 0 1609 1641 731194118 731194150 4.570000e-04 56.5
20 TraesCS3A01G472300 chr2B 89.394 330 29 4 2900 3228 692105435 692105111 8.460000e-111 411.0
21 TraesCS3A01G472300 chr2B 83.523 176 21 5 3044 3219 95552247 95552080 1.220000e-34 158.0
22 TraesCS3A01G472300 chr2B 84.496 129 16 3 2900 3027 476026673 476026548 1.230000e-24 124.0
23 TraesCS3A01G472300 chr2B 98.387 62 1 0 3214 3275 692105099 692105038 3.450000e-20 110.0
24 TraesCS3A01G472300 chr5B 86.364 330 36 5 2900 3228 513991949 513992270 5.200000e-93 351.0
25 TraesCS3A01G472300 chr5B 88.535 157 18 0 1 157 316572108 316572264 1.200000e-44 191.0
26 TraesCS3A01G472300 chr5B 92.063 63 4 1 3214 3275 513992282 513992344 1.620000e-13 87.9
27 TraesCS3A01G472300 chr7A 81.452 248 23 15 3040 3273 244706106 244705868 7.220000e-42 182.0
28 TraesCS3A01G472300 chr7A 81.377 247 24 15 3040 3273 244707546 244707309 7.220000e-42 182.0
29 TraesCS3A01G472300 chr7D 84.293 191 17 10 3040 3228 500978009 500978188 1.210000e-39 174.0
30 TraesCS3A01G472300 chr7D 86.047 129 17 1 2900 3027 154203721 154203849 1.580000e-28 137.0
31 TraesCS3A01G472300 chr5D 84.293 191 17 10 3040 3228 389584621 389584442 1.210000e-39 174.0
32 TraesCS3A01G472300 chr2D 84.293 191 17 10 3040 3228 610852385 610852564 1.210000e-39 174.0
33 TraesCS3A01G472300 chr2D 85.350 157 23 0 1 157 19451892 19452048 2.610000e-36 163.0
34 TraesCS3A01G472300 chr1D 83.246 191 18 11 3040 3228 411520771 411520593 2.610000e-36 163.0
35 TraesCS3A01G472300 chr1D 81.538 130 20 4 2900 3027 452115466 452115593 1.610000e-18 104.0
36 TraesCS3A01G472300 chr1D 83.516 91 13 2 2945 3034 488811601 488811690 2.090000e-12 84.2
37 TraesCS3A01G472300 chr5A 84.496 129 15 5 2900 3027 588676754 588676878 4.440000e-24 122.0
38 TraesCS3A01G472300 chr4D 81.395 129 20 3 2900 3027 101062356 101062481 5.780000e-18 102.0
39 TraesCS3A01G472300 chr7B 91.525 59 5 0 2969 3027 152799504 152799562 7.530000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G472300 chr3A 703394153 703397427 3274 False 6048.0 6048 100.0000 1 3275 1 chr3A.!!$F5 3274
1 TraesCS3A01G472300 chr3A 655635844 655637450 1606 True 1092.0 1092 79.5520 602 2259 1 chr3A.!!$R1 1657
2 TraesCS3A01G472300 chr3A 703170855 703171971 1116 False 645.0 645 77.3830 1080 2227 1 chr3A.!!$F3 1147
3 TraesCS3A01G472300 chr3D 570558490 570561052 2562 False 1630.5 3153 88.1785 159 2847 2 chr3D.!!$F4 2688
4 TraesCS3A01G472300 chr3D 570495166 570496349 1183 True 752.0 752 78.4720 1046 2247 1 chr3D.!!$R2 1201
5 TraesCS3A01G472300 chr3D 570379584 570380799 1215 False 708.0 708 77.5060 997 2257 1 chr3D.!!$F3 1260
6 TraesCS3A01G472300 chr3D 570281108 570282225 1117 False 691.0 691 78.1140 1080 2227 1 chr3D.!!$F1 1147
7 TraesCS3A01G472300 chr3D 520190686 520192359 1673 True 606.5 1109 82.2490 582 2259 2 chr3D.!!$R3 1677
8 TraesCS3A01G472300 chr3D 570311115 570312200 1085 False 542.0 542 76.1100 1100 2214 1 chr3D.!!$F2 1114
9 TraesCS3A01G472300 chr3D 570400800 570401307 507 True 324.0 324 78.5030 1045 1558 1 chr3D.!!$R1 513
10 TraesCS3A01G472300 chr3B 757807111 757809242 2131 False 2929.0 2929 91.5860 467 2605 1 chr3B.!!$F3 2138
11 TraesCS3A01G472300 chr3B 685038029 685039648 1619 True 1138.0 1138 79.9300 584 2259 1 chr3B.!!$R1 1675
12 TraesCS3A01G472300 chr3B 757772178 757773393 1215 True 808.0 808 78.9390 1045 2275 1 chr3B.!!$R2 1230

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
86 87 0.104304 CCTGCAGTACCGTGGTATCC 59.896 60.0 13.81 0.0 32.82 2.59 F
319 324 0.106519 GGCATGGCATGGGAGTAAGT 60.107 55.0 27.48 0.0 0.00 2.24 F
1958 2113 0.038251 TTCCAGCTGTGCTACGACAG 60.038 55.0 13.81 0.0 45.34 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1022 1155 2.028190 CTAGCGAGACGGCCATGG 59.972 66.667 7.63 7.63 0.0 3.66 R
2197 2355 2.034221 GAACCCCAGCCGCTTCTT 59.966 61.111 0.00 0.00 0.0 2.52 R
3034 3233 0.037160 GGTGTTTTAGCGGGAGGGAA 59.963 55.000 0.00 0.00 0.0 3.97 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 4.608948 CCTGATCTAGGGTGTACCAATC 57.391 50.000 3.11 1.64 43.33 2.67
31 32 3.325135 CCTGATCTAGGGTGTACCAATCC 59.675 52.174 3.11 0.00 43.33 3.01
32 33 3.314693 TGATCTAGGGTGTACCAATCCC 58.685 50.000 3.11 0.00 43.89 3.85
33 34 1.784358 TCTAGGGTGTACCAATCCCG 58.216 55.000 3.11 0.00 45.27 5.14
34 35 1.007479 TCTAGGGTGTACCAATCCCGT 59.993 52.381 3.11 0.00 45.27 5.28
35 36 1.138266 CTAGGGTGTACCAATCCCGTG 59.862 57.143 3.11 0.00 45.27 4.94
36 37 0.545787 AGGGTGTACCAATCCCGTGA 60.546 55.000 3.11 0.00 45.27 4.35
37 38 0.107848 GGGTGTACCAATCCCGTGAG 60.108 60.000 3.11 0.00 39.85 3.51
38 39 0.107848 GGTGTACCAATCCCGTGAGG 60.108 60.000 0.00 0.00 43.59 3.86
39 40 2.511193 GGTGTACCAATCCCGTGAGGA 61.511 57.143 0.00 0.00 45.70 3.71
40 41 3.999915 GGTGTACCAATCCCGTGAGGAA 62.000 54.545 0.00 0.00 45.70 3.36
41 42 5.795844 GGTGTACCAATCCCGTGAGGAAG 62.796 56.522 0.00 0.00 45.70 3.46
53 54 4.571372 CGTGAGGAAGTTAGTATCCCTC 57.429 50.000 0.00 0.00 42.72 4.30
54 55 4.208746 CGTGAGGAAGTTAGTATCCCTCT 58.791 47.826 0.00 0.00 42.82 3.69
55 56 4.036971 CGTGAGGAAGTTAGTATCCCTCTG 59.963 50.000 0.00 0.00 42.82 3.35
56 57 4.342665 GTGAGGAAGTTAGTATCCCTCTGG 59.657 50.000 0.00 0.00 42.82 3.86
68 69 3.436577 TCCCTCTGGATACGATCTACC 57.563 52.381 0.00 0.00 35.03 3.18
69 70 2.987437 TCCCTCTGGATACGATCTACCT 59.013 50.000 0.00 0.00 35.03 3.08
70 71 3.085533 CCCTCTGGATACGATCTACCTG 58.914 54.545 0.00 0.00 42.51 4.00
71 72 2.490115 CCTCTGGATACGATCTACCTGC 59.510 54.545 0.00 0.00 42.51 4.85
72 73 3.149981 CTCTGGATACGATCTACCTGCA 58.850 50.000 0.00 0.00 42.51 4.41
73 74 3.149981 TCTGGATACGATCTACCTGCAG 58.850 50.000 6.78 6.78 42.51 4.41
74 75 2.887783 CTGGATACGATCTACCTGCAGT 59.112 50.000 13.81 3.45 42.51 4.40
75 76 4.072839 CTGGATACGATCTACCTGCAGTA 58.927 47.826 13.81 4.50 42.51 2.74
76 77 3.819337 TGGATACGATCTACCTGCAGTAC 59.181 47.826 13.81 0.00 42.51 2.73
77 78 3.190953 GGATACGATCTACCTGCAGTACC 59.809 52.174 13.81 0.00 0.00 3.34
78 79 1.022735 ACGATCTACCTGCAGTACCG 58.977 55.000 13.81 9.41 0.00 4.02
79 80 1.022735 CGATCTACCTGCAGTACCGT 58.977 55.000 13.81 5.75 0.00 4.83
80 81 1.268589 CGATCTACCTGCAGTACCGTG 60.269 57.143 13.81 0.00 0.00 4.94
81 82 1.067212 GATCTACCTGCAGTACCGTGG 59.933 57.143 13.81 5.42 0.00 4.94
82 83 0.251474 TCTACCTGCAGTACCGTGGT 60.251 55.000 13.81 4.77 35.05 4.16
83 84 1.004628 TCTACCTGCAGTACCGTGGTA 59.995 52.381 13.81 5.78 32.74 3.25
84 85 2.029623 CTACCTGCAGTACCGTGGTAT 58.970 52.381 13.81 0.00 33.48 2.73
85 86 0.822164 ACCTGCAGTACCGTGGTATC 59.178 55.000 13.81 0.00 32.82 2.24
86 87 0.104304 CCTGCAGTACCGTGGTATCC 59.896 60.000 13.81 0.00 32.82 2.59
87 88 0.104304 CTGCAGTACCGTGGTATCCC 59.896 60.000 5.25 0.00 32.82 3.85
88 89 0.324923 TGCAGTACCGTGGTATCCCT 60.325 55.000 1.43 0.00 32.82 4.20
89 90 1.063792 TGCAGTACCGTGGTATCCCTA 60.064 52.381 1.43 0.00 32.82 3.53
90 91 1.612463 GCAGTACCGTGGTATCCCTAG 59.388 57.143 1.43 0.00 32.82 3.02
91 92 1.612463 CAGTACCGTGGTATCCCTAGC 59.388 57.143 1.43 0.00 32.82 3.42
92 93 1.216175 AGTACCGTGGTATCCCTAGCA 59.784 52.381 1.43 0.00 33.08 3.49
93 94 2.034124 GTACCGTGGTATCCCTAGCAA 58.966 52.381 1.43 0.00 37.12 3.91
94 95 1.120530 ACCGTGGTATCCCTAGCAAG 58.879 55.000 0.00 0.00 37.12 4.01
95 96 1.120530 CCGTGGTATCCCTAGCAAGT 58.879 55.000 0.00 0.00 37.12 3.16
96 97 2.313317 CCGTGGTATCCCTAGCAAGTA 58.687 52.381 0.00 0.00 37.12 2.24
97 98 2.296471 CCGTGGTATCCCTAGCAAGTAG 59.704 54.545 0.00 0.00 37.12 2.57
98 99 3.220110 CGTGGTATCCCTAGCAAGTAGA 58.780 50.000 0.00 0.00 37.12 2.59
99 100 3.635373 CGTGGTATCCCTAGCAAGTAGAA 59.365 47.826 0.00 0.00 37.12 2.10
100 101 4.281182 CGTGGTATCCCTAGCAAGTAGAAT 59.719 45.833 0.00 0.00 37.12 2.40
101 102 5.565045 CGTGGTATCCCTAGCAAGTAGAATC 60.565 48.000 0.00 0.00 37.12 2.52
102 103 4.838986 TGGTATCCCTAGCAAGTAGAATCC 59.161 45.833 0.00 0.00 32.59 3.01
103 104 4.223255 GGTATCCCTAGCAAGTAGAATCCC 59.777 50.000 0.00 0.00 0.00 3.85
104 105 2.690840 TCCCTAGCAAGTAGAATCCCC 58.309 52.381 0.00 0.00 0.00 4.81
105 106 1.700186 CCCTAGCAAGTAGAATCCCCC 59.300 57.143 0.00 0.00 0.00 5.40
120 121 1.221840 CCCCCTCTTGTGTCATCCG 59.778 63.158 0.00 0.00 0.00 4.18
121 122 1.450312 CCCCTCTTGTGTCATCCGC 60.450 63.158 0.00 0.00 0.00 5.54
122 123 1.450312 CCCTCTTGTGTCATCCGCC 60.450 63.158 0.00 0.00 0.00 6.13
123 124 1.296392 CCTCTTGTGTCATCCGCCA 59.704 57.895 0.00 0.00 0.00 5.69
124 125 0.742281 CCTCTTGTGTCATCCGCCAG 60.742 60.000 0.00 0.00 0.00 4.85
125 126 1.364626 CTCTTGTGTCATCCGCCAGC 61.365 60.000 0.00 0.00 0.00 4.85
126 127 1.672030 CTTGTGTCATCCGCCAGCA 60.672 57.895 0.00 0.00 0.00 4.41
127 128 1.228094 TTGTGTCATCCGCCAGCAA 60.228 52.632 0.00 0.00 0.00 3.91
128 129 1.236616 TTGTGTCATCCGCCAGCAAG 61.237 55.000 0.00 0.00 0.00 4.01
129 130 1.672356 GTGTCATCCGCCAGCAAGT 60.672 57.895 0.00 0.00 0.00 3.16
130 131 0.391130 GTGTCATCCGCCAGCAAGTA 60.391 55.000 0.00 0.00 0.00 2.24
131 132 0.108186 TGTCATCCGCCAGCAAGTAG 60.108 55.000 0.00 0.00 0.00 2.57
132 133 0.811616 GTCATCCGCCAGCAAGTAGG 60.812 60.000 0.00 0.00 0.00 3.18
148 149 2.282180 GGCAAAGCCGTCCAAGGA 60.282 61.111 0.00 0.00 39.62 3.36
149 150 2.626780 GGCAAAGCCGTCCAAGGAC 61.627 63.158 9.22 9.22 39.62 3.85
157 158 4.717313 GTCCAAGGACGGGCCACC 62.717 72.222 4.39 6.48 40.02 4.61
178 179 3.966844 CCGAGATCGAGTATTAACACGTG 59.033 47.826 15.48 15.48 43.02 4.49
179 180 4.495349 CCGAGATCGAGTATTAACACGTGT 60.495 45.833 17.22 17.22 43.02 4.49
181 182 6.361114 CGAGATCGAGTATTAACACGTGTAT 58.639 40.000 23.69 15.32 43.02 2.29
182 183 7.359514 CCGAGATCGAGTATTAACACGTGTATA 60.360 40.741 23.69 14.21 43.02 1.47
183 184 8.167345 CGAGATCGAGTATTAACACGTGTATAT 58.833 37.037 23.69 19.34 43.02 0.86
190 191 8.882415 AGTATTAACACGTGTATATCCAAAGG 57.118 34.615 23.69 0.00 0.00 3.11
194 195 5.272283 ACACGTGTATATCCAAAGGTAGG 57.728 43.478 21.98 0.00 0.00 3.18
202 203 0.698238 TCCAAAGGTAGGCACTGCAT 59.302 50.000 2.82 0.00 44.97 3.96
269 274 2.421523 CAAACTCGAATGCGATTCACG 58.578 47.619 0.00 0.00 46.80 4.35
313 318 4.818863 CCGTGGCATGGCATGGGA 62.819 66.667 39.94 12.11 0.00 4.37
314 319 3.214123 CGTGGCATGGCATGGGAG 61.214 66.667 28.97 13.62 0.00 4.30
315 320 2.043652 GTGGCATGGCATGGGAGT 60.044 61.111 26.07 0.00 0.00 3.85
316 321 1.227102 GTGGCATGGCATGGGAGTA 59.773 57.895 26.07 0.00 0.00 2.59
317 322 0.395586 GTGGCATGGCATGGGAGTAA 60.396 55.000 26.07 0.00 0.00 2.24
318 323 0.106569 TGGCATGGCATGGGAGTAAG 60.107 55.000 27.48 1.12 0.00 2.34
319 324 0.106519 GGCATGGCATGGGAGTAAGT 60.107 55.000 27.48 0.00 0.00 2.24
320 325 1.027357 GCATGGCATGGGAGTAAGTG 58.973 55.000 27.48 1.15 0.00 3.16
321 326 1.408683 GCATGGCATGGGAGTAAGTGA 60.409 52.381 27.48 0.00 0.00 3.41
322 327 2.569059 CATGGCATGGGAGTAAGTGAG 58.431 52.381 19.80 0.00 0.00 3.51
323 328 1.656587 TGGCATGGGAGTAAGTGAGT 58.343 50.000 0.00 0.00 0.00 3.41
324 329 1.278985 TGGCATGGGAGTAAGTGAGTG 59.721 52.381 0.00 0.00 0.00 3.51
325 330 1.555075 GGCATGGGAGTAAGTGAGTGA 59.445 52.381 0.00 0.00 0.00 3.41
326 331 2.419297 GGCATGGGAGTAAGTGAGTGAG 60.419 54.545 0.00 0.00 0.00 3.51
327 332 2.898705 CATGGGAGTAAGTGAGTGAGC 58.101 52.381 0.00 0.00 0.00 4.26
328 333 0.888619 TGGGAGTAAGTGAGTGAGCG 59.111 55.000 0.00 0.00 0.00 5.03
329 334 0.889306 GGGAGTAAGTGAGTGAGCGT 59.111 55.000 0.00 0.00 0.00 5.07
330 335 1.402984 GGGAGTAAGTGAGTGAGCGTG 60.403 57.143 0.00 0.00 0.00 5.34
331 336 1.341606 GAGTAAGTGAGTGAGCGTGC 58.658 55.000 0.00 0.00 0.00 5.34
332 337 0.387367 AGTAAGTGAGTGAGCGTGCG 60.387 55.000 0.00 0.00 0.00 5.34
333 338 1.733041 TAAGTGAGTGAGCGTGCGC 60.733 57.895 8.67 8.67 42.33 6.09
344 349 4.000557 CGTGCGCGTTGTTGCTCT 62.001 61.111 12.43 0.00 0.00 4.09
345 350 2.127609 GTGCGCGTTGTTGCTCTC 60.128 61.111 8.43 0.00 0.00 3.20
346 351 2.280119 TGCGCGTTGTTGCTCTCT 60.280 55.556 8.43 0.00 0.00 3.10
347 352 1.887242 TGCGCGTTGTTGCTCTCTT 60.887 52.632 8.43 0.00 0.00 2.85
348 353 1.279840 GCGCGTTGTTGCTCTCTTT 59.720 52.632 8.43 0.00 0.00 2.52
349 354 0.722799 GCGCGTTGTTGCTCTCTTTC 60.723 55.000 8.43 0.00 0.00 2.62
350 355 0.861837 CGCGTTGTTGCTCTCTTTCT 59.138 50.000 0.00 0.00 0.00 2.52
351 356 1.261619 CGCGTTGTTGCTCTCTTTCTT 59.738 47.619 0.00 0.00 0.00 2.52
352 357 2.475111 CGCGTTGTTGCTCTCTTTCTTA 59.525 45.455 0.00 0.00 0.00 2.10
353 358 3.123621 CGCGTTGTTGCTCTCTTTCTTAT 59.876 43.478 0.00 0.00 0.00 1.73
354 359 4.398247 GCGTTGTTGCTCTCTTTCTTATG 58.602 43.478 0.00 0.00 0.00 1.90
355 360 4.398247 CGTTGTTGCTCTCTTTCTTATGC 58.602 43.478 0.00 0.00 0.00 3.14
356 361 4.153117 CGTTGTTGCTCTCTTTCTTATGCT 59.847 41.667 0.00 0.00 0.00 3.79
357 362 5.348724 CGTTGTTGCTCTCTTTCTTATGCTA 59.651 40.000 0.00 0.00 0.00 3.49
358 363 6.538444 GTTGTTGCTCTCTTTCTTATGCTAC 58.462 40.000 0.00 0.00 0.00 3.58
359 364 5.793817 TGTTGCTCTCTTTCTTATGCTACA 58.206 37.500 0.00 0.00 34.90 2.74
360 365 6.230472 TGTTGCTCTCTTTCTTATGCTACAA 58.770 36.000 0.00 0.00 34.52 2.41
361 366 6.147821 TGTTGCTCTCTTTCTTATGCTACAAC 59.852 38.462 0.00 0.00 34.52 3.32
362 367 6.042638 TGCTCTCTTTCTTATGCTACAACT 57.957 37.500 0.00 0.00 0.00 3.16
363 368 5.871524 TGCTCTCTTTCTTATGCTACAACTG 59.128 40.000 0.00 0.00 0.00 3.16
364 369 5.293079 GCTCTCTTTCTTATGCTACAACTGG 59.707 44.000 0.00 0.00 0.00 4.00
365 370 5.178797 TCTCTTTCTTATGCTACAACTGGC 58.821 41.667 0.00 0.00 0.00 4.85
366 371 4.905429 TCTTTCTTATGCTACAACTGGCA 58.095 39.130 0.00 0.00 42.80 4.92
367 372 4.937620 TCTTTCTTATGCTACAACTGGCAG 59.062 41.667 14.16 14.16 41.88 4.85
368 373 3.981071 TCTTATGCTACAACTGGCAGT 57.019 42.857 15.88 15.88 41.88 4.40
369 374 5.414789 TTCTTATGCTACAACTGGCAGTA 57.585 39.130 22.37 3.98 41.88 2.74
370 375 4.755411 TCTTATGCTACAACTGGCAGTAC 58.245 43.478 22.37 8.89 41.88 2.73
371 376 4.221924 TCTTATGCTACAACTGGCAGTACA 59.778 41.667 22.37 14.17 41.88 2.90
372 377 2.920724 TGCTACAACTGGCAGTACAA 57.079 45.000 22.37 8.02 34.22 2.41
373 378 2.489971 TGCTACAACTGGCAGTACAAC 58.510 47.619 22.37 10.32 34.22 3.32
395 400 6.115448 ACAACCATGCTACTCTTCTTAACT 57.885 37.500 0.00 0.00 0.00 2.24
454 461 8.819974 CAAGTCAAATAAAACTTGCAGATTTGT 58.180 29.630 2.66 2.23 44.03 2.83
458 465 9.033481 TCAAATAAAACTTGCAGATTTGTGAAG 57.967 29.630 0.00 0.00 38.23 3.02
505 512 7.069702 TCCAATGAATTAGCATGAAATTGCCTA 59.930 33.333 10.23 0.00 43.83 3.93
510 517 7.922278 TGAATTAGCATGAAATTGCCTATTCAC 59.078 33.333 14.54 0.00 42.14 3.18
536 543 8.331022 CAGTTGATAATGAAGAGTATGGAAACG 58.669 37.037 0.00 0.00 0.00 3.60
540 547 9.226606 TGATAATGAAGAGTATGGAAACGTTTT 57.773 29.630 15.89 1.63 0.00 2.43
554 561 4.503741 AACGTTTTCACCCATCAATCTG 57.496 40.909 0.00 0.00 0.00 2.90
559 566 5.048364 CGTTTTCACCCATCAATCTGGTTTA 60.048 40.000 0.00 0.00 34.23 2.01
560 567 6.350110 CGTTTTCACCCATCAATCTGGTTTAT 60.350 38.462 0.00 0.00 34.23 1.40
590 597 6.665992 ACCAGTTACTCATTGTTAGTCTCA 57.334 37.500 0.00 0.00 0.00 3.27
704 750 2.929641 TGTGCACAGAAATGGACAGAA 58.070 42.857 17.42 0.00 44.85 3.02
706 752 3.890756 TGTGCACAGAAATGGACAGAAAT 59.109 39.130 17.42 0.00 44.85 2.17
720 767 4.240096 GACAGAAATGAACATGGGCTTTG 58.760 43.478 0.00 0.00 0.00 2.77
742 795 0.523966 CTCGGTCAGTCAGTCTCACC 59.476 60.000 0.00 0.00 33.79 4.02
749 802 0.612229 AGTCAGTCTCACCCTGCATG 59.388 55.000 0.00 0.00 0.00 4.06
805 858 1.016130 CGCAGCAAGATCCGACACTT 61.016 55.000 0.00 0.00 0.00 3.16
825 878 4.566360 ACTTTGGCAGTCGAAAACAATTTG 59.434 37.500 0.00 0.00 0.00 2.32
832 885 5.846473 GCAGTCGAAAACAATTTGACTACTC 59.154 40.000 10.01 1.65 36.07 2.59
917 971 2.042831 GCACATGCCTCACCTCCAC 61.043 63.158 0.00 0.00 34.31 4.02
934 998 6.040616 CACCTCCACTATATAAAGAAGGTCGT 59.959 42.308 4.39 0.00 0.00 4.34
964 1041 1.503542 GAATGCCACACTCGCAAGG 59.496 57.895 0.00 0.00 40.22 3.61
977 1065 1.380403 CGCAAGGTCAACACCACCAA 61.380 55.000 0.00 0.00 46.68 3.67
990 1078 1.515521 CCACCAACAAACCTCTCCGC 61.516 60.000 0.00 0.00 0.00 5.54
994 1121 1.228154 AACAAACCTCTCCGCCCAC 60.228 57.895 0.00 0.00 0.00 4.61
1013 1146 4.408821 AAAGATGGCGCGGCTCCA 62.409 61.111 33.23 20.14 38.09 3.86
1322 1458 2.158682 ACCACAGTCACAAGGTATGCAA 60.159 45.455 0.00 0.00 31.32 4.08
1341 1477 2.751688 GCCTTCCCGTACAACCCA 59.248 61.111 0.00 0.00 0.00 4.51
1347 1483 1.373748 CCCGTACAACCCAGTCACG 60.374 63.158 0.00 0.00 0.00 4.35
1578 1718 2.904434 GGTCTCCAACAAGTTCCTCCTA 59.096 50.000 0.00 0.00 0.00 2.94
1590 1730 1.762460 CCTCCTATGTCTGCCCCGT 60.762 63.158 0.00 0.00 0.00 5.28
1827 1982 4.052229 ACGAGGTCGCCCTTCACG 62.052 66.667 0.00 0.00 42.86 4.35
1958 2113 0.038251 TTCCAGCTGTGCTACGACAG 60.038 55.000 13.81 0.00 45.34 3.51
2197 2355 3.615110 GCTGGAGTTCGACATGAAGAAGA 60.615 47.826 0.00 0.00 37.23 2.87
2198 2356 4.560128 CTGGAGTTCGACATGAAGAAGAA 58.440 43.478 0.00 0.00 37.23 2.52
2199 2357 4.560128 TGGAGTTCGACATGAAGAAGAAG 58.440 43.478 0.00 0.00 37.23 2.85
2208 2366 1.800805 TGAAGAAGAAGAAGCGGCTG 58.199 50.000 1.81 0.00 0.00 4.85
2259 2417 2.035066 GTGCAGCCACTTCAATTTCACT 59.965 45.455 0.00 0.00 38.93 3.41
2275 2433 2.333225 CTACTCGCAGCGCCTAGG 59.667 66.667 10.87 3.67 0.00 3.02
2302 2460 9.840427 CATTTTATGGTCGGTGATAATAAATCC 57.160 33.333 0.00 0.00 0.00 3.01
2375 2539 2.813908 GGTGTTAGGCCTGCGACG 60.814 66.667 17.99 0.00 0.00 5.12
2392 2556 2.247267 GTTTGTCACGCGGTTCCG 59.753 61.111 12.47 6.90 0.00 4.30
2450 2619 1.991965 CACTTGTTTGTGTGTGGTTGC 59.008 47.619 0.00 0.00 33.61 4.17
2709 2905 4.090498 GCAGGATTTTGCGATTTTTCTGTC 59.910 41.667 0.00 0.00 33.90 3.51
2710 2906 4.622740 CAGGATTTTGCGATTTTTCTGTCC 59.377 41.667 0.00 0.00 0.00 4.02
2746 2942 7.618502 TTTTTAGTCCAAGCGCTATTATTCA 57.381 32.000 12.05 0.00 0.00 2.57
2748 2944 7.801716 TTTAGTCCAAGCGCTATTATTCATT 57.198 32.000 12.05 0.00 0.00 2.57
2749 2945 5.679734 AGTCCAAGCGCTATTATTCATTG 57.320 39.130 12.05 0.72 0.00 2.82
2750 2946 5.126067 AGTCCAAGCGCTATTATTCATTGT 58.874 37.500 12.05 0.00 0.00 2.71
2751 2947 5.590259 AGTCCAAGCGCTATTATTCATTGTT 59.410 36.000 12.05 0.00 0.00 2.83
2752 2948 5.909610 GTCCAAGCGCTATTATTCATTGTTC 59.090 40.000 12.05 0.00 0.00 3.18
2753 2949 5.822519 TCCAAGCGCTATTATTCATTGTTCT 59.177 36.000 12.05 0.00 0.00 3.01
2754 2950 6.017934 TCCAAGCGCTATTATTCATTGTTCTC 60.018 38.462 12.05 0.00 0.00 2.87
2755 2951 6.017605 CCAAGCGCTATTATTCATTGTTCTCT 60.018 38.462 12.05 0.00 0.00 3.10
2756 2952 6.777526 AGCGCTATTATTCATTGTTCTCTC 57.222 37.500 8.99 0.00 0.00 3.20
2757 2953 6.520272 AGCGCTATTATTCATTGTTCTCTCT 58.480 36.000 8.99 0.00 0.00 3.10
2758 2954 6.644592 AGCGCTATTATTCATTGTTCTCTCTC 59.355 38.462 8.99 0.00 0.00 3.20
2759 2955 6.644592 GCGCTATTATTCATTGTTCTCTCTCT 59.355 38.462 0.00 0.00 0.00 3.10
2760 2956 7.148820 GCGCTATTATTCATTGTTCTCTCTCTC 60.149 40.741 0.00 0.00 0.00 3.20
2761 2957 7.328249 CGCTATTATTCATTGTTCTCTCTCTCC 59.672 40.741 0.00 0.00 0.00 3.71
2771 2967 2.408565 TCTCTCTCTCCCTCTCTCTCC 58.591 57.143 0.00 0.00 0.00 3.71
2775 2971 0.478507 CTCTCCCTCTCTCTCCCTCC 59.521 65.000 0.00 0.00 0.00 4.30
2777 2973 2.015726 TCCCTCTCTCTCCCTCCCC 61.016 68.421 0.00 0.00 0.00 4.81
2786 2982 0.996762 TCTCCCTCCCCCTCTCTCTC 60.997 65.000 0.00 0.00 0.00 3.20
2801 2997 5.354513 CCTCTCTCTCGTTATGTGTGTCTAA 59.645 44.000 0.00 0.00 0.00 2.10
2832 3031 5.367945 AGGAAAAACTGTACAAGGTGAGA 57.632 39.130 0.00 0.00 0.00 3.27
2835 3034 5.007724 GGAAAAACTGTACAAGGTGAGACAG 59.992 44.000 0.00 11.12 39.23 3.51
2847 3046 2.356535 GGTGAGACAGGCAGGATTCAAT 60.357 50.000 0.00 0.00 0.00 2.57
2848 3047 3.118261 GGTGAGACAGGCAGGATTCAATA 60.118 47.826 0.00 0.00 0.00 1.90
2849 3048 4.445448 GGTGAGACAGGCAGGATTCAATAT 60.445 45.833 0.00 0.00 0.00 1.28
2850 3049 5.128919 GTGAGACAGGCAGGATTCAATATT 58.871 41.667 0.00 0.00 0.00 1.28
2851 3050 6.291377 GTGAGACAGGCAGGATTCAATATTA 58.709 40.000 0.00 0.00 0.00 0.98
2852 3051 6.426328 GTGAGACAGGCAGGATTCAATATTAG 59.574 42.308 0.00 0.00 0.00 1.73
2853 3052 6.100279 TGAGACAGGCAGGATTCAATATTAGT 59.900 38.462 0.00 0.00 0.00 2.24
2854 3053 7.290014 TGAGACAGGCAGGATTCAATATTAGTA 59.710 37.037 0.00 0.00 0.00 1.82
2855 3054 7.445945 AGACAGGCAGGATTCAATATTAGTAC 58.554 38.462 0.00 0.00 0.00 2.73
2856 3055 6.534634 ACAGGCAGGATTCAATATTAGTACC 58.465 40.000 0.00 0.00 0.00 3.34
2857 3056 6.101150 ACAGGCAGGATTCAATATTAGTACCA 59.899 38.462 0.00 0.00 0.00 3.25
2858 3057 6.428159 CAGGCAGGATTCAATATTAGTACCAC 59.572 42.308 0.00 0.00 0.00 4.16
2859 3058 5.705905 GGCAGGATTCAATATTAGTACCACC 59.294 44.000 0.00 0.00 0.00 4.61
2860 3059 5.705905 GCAGGATTCAATATTAGTACCACCC 59.294 44.000 0.00 0.00 0.00 4.61
2861 3060 6.238648 CAGGATTCAATATTAGTACCACCCC 58.761 44.000 0.00 0.00 0.00 4.95
2862 3061 5.012768 AGGATTCAATATTAGTACCACCCCG 59.987 44.000 0.00 0.00 0.00 5.73
2863 3062 3.756933 TCAATATTAGTACCACCCCGC 57.243 47.619 0.00 0.00 0.00 6.13
2864 3063 3.039743 TCAATATTAGTACCACCCCGCA 58.960 45.455 0.00 0.00 0.00 5.69
2865 3064 3.649023 TCAATATTAGTACCACCCCGCAT 59.351 43.478 0.00 0.00 0.00 4.73
2866 3065 3.975168 ATATTAGTACCACCCCGCATC 57.025 47.619 0.00 0.00 0.00 3.91
2867 3066 1.502690 ATTAGTACCACCCCGCATCA 58.497 50.000 0.00 0.00 0.00 3.07
2868 3067 0.538118 TTAGTACCACCCCGCATCAC 59.462 55.000 0.00 0.00 0.00 3.06
2869 3068 1.332144 TAGTACCACCCCGCATCACC 61.332 60.000 0.00 0.00 0.00 4.02
2870 3069 3.404438 TACCACCCCGCATCACCC 61.404 66.667 0.00 0.00 0.00 4.61
2926 3125 3.930504 GGATTGGAGCAAGCCCAG 58.069 61.111 0.00 0.00 43.25 4.45
2927 3126 1.755783 GGATTGGAGCAAGCCCAGG 60.756 63.158 0.00 0.00 43.25 4.45
2928 3127 1.755783 GATTGGAGCAAGCCCAGGG 60.756 63.158 0.00 0.00 34.77 4.45
2960 3159 4.663636 AAAAATTTCGTCGCGAGAGAAT 57.336 36.364 22.32 14.11 43.49 2.40
2961 3160 4.663636 AAAATTTCGTCGCGAGAGAATT 57.336 36.364 22.32 18.14 43.49 2.17
2962 3161 4.663636 AAATTTCGTCGCGAGAGAATTT 57.336 36.364 22.32 21.66 43.49 1.82
2963 3162 4.663636 AATTTCGTCGCGAGAGAATTTT 57.336 36.364 22.32 17.02 43.49 1.82
2964 3163 4.663636 ATTTCGTCGCGAGAGAATTTTT 57.336 36.364 22.32 9.47 43.49 1.94
2984 3183 4.939509 TTTTTGTCCGTCAAGCTATAGC 57.060 40.909 17.33 17.33 37.35 2.97
3003 3202 9.581099 GCTATAGCTATCTCAAAAGAATACCTC 57.419 37.037 17.75 0.00 38.21 3.85
3012 3211 8.225603 TCTCAAAAGAATACCTCAAATATGGC 57.774 34.615 0.00 0.00 0.00 4.40
3013 3212 8.055181 TCTCAAAAGAATACCTCAAATATGGCT 58.945 33.333 0.00 0.00 0.00 4.75
3014 3213 8.225603 TCAAAAGAATACCTCAAATATGGCTC 57.774 34.615 0.00 0.00 0.00 4.70
3015 3214 7.833682 TCAAAAGAATACCTCAAATATGGCTCA 59.166 33.333 0.00 0.00 0.00 4.26
3016 3215 8.469200 CAAAAGAATACCTCAAATATGGCTCAA 58.531 33.333 0.00 0.00 0.00 3.02
3017 3216 7.573968 AAGAATACCTCAAATATGGCTCAAC 57.426 36.000 0.00 0.00 0.00 3.18
3018 3217 6.904626 AGAATACCTCAAATATGGCTCAACT 58.095 36.000 0.00 0.00 0.00 3.16
3019 3218 6.769822 AGAATACCTCAAATATGGCTCAACTG 59.230 38.462 0.00 0.00 0.00 3.16
3020 3219 3.019564 ACCTCAAATATGGCTCAACTGC 58.980 45.455 0.00 0.00 0.00 4.40
3021 3220 3.018856 CCTCAAATATGGCTCAACTGCA 58.981 45.455 0.00 0.00 34.04 4.41
3022 3221 3.181493 CCTCAAATATGGCTCAACTGCAC 60.181 47.826 0.00 0.00 34.04 4.57
3023 3222 2.754552 TCAAATATGGCTCAACTGCACC 59.245 45.455 0.00 0.00 34.04 5.01
3024 3223 2.492881 CAAATATGGCTCAACTGCACCA 59.507 45.455 0.00 0.00 36.43 4.17
3025 3224 2.512692 ATATGGCTCAACTGCACCAA 57.487 45.000 0.00 0.00 35.41 3.67
3026 3225 2.284754 TATGGCTCAACTGCACCAAA 57.715 45.000 0.00 0.00 35.41 3.28
3027 3226 1.636148 ATGGCTCAACTGCACCAAAT 58.364 45.000 0.00 0.00 35.41 2.32
3028 3227 0.961019 TGGCTCAACTGCACCAAATC 59.039 50.000 0.00 0.00 34.04 2.17
3029 3228 1.251251 GGCTCAACTGCACCAAATCT 58.749 50.000 0.00 0.00 34.04 2.40
3030 3229 1.615392 GGCTCAACTGCACCAAATCTT 59.385 47.619 0.00 0.00 34.04 2.40
3031 3230 2.036346 GGCTCAACTGCACCAAATCTTT 59.964 45.455 0.00 0.00 34.04 2.52
3032 3231 3.054878 GCTCAACTGCACCAAATCTTTG 58.945 45.455 0.00 0.00 37.90 2.77
3043 3242 1.818674 CAAATCTTTGGTTCCCTCCCG 59.181 52.381 0.00 0.00 34.59 5.14
3044 3243 0.323451 AATCTTTGGTTCCCTCCCGC 60.323 55.000 0.00 0.00 0.00 6.13
3045 3244 1.208165 ATCTTTGGTTCCCTCCCGCT 61.208 55.000 0.00 0.00 0.00 5.52
3046 3245 0.545787 TCTTTGGTTCCCTCCCGCTA 60.546 55.000 0.00 0.00 0.00 4.26
3047 3246 0.326927 CTTTGGTTCCCTCCCGCTAA 59.673 55.000 0.00 0.00 0.00 3.09
3048 3247 0.772384 TTTGGTTCCCTCCCGCTAAA 59.228 50.000 0.00 0.00 0.00 1.85
3049 3248 0.772384 TTGGTTCCCTCCCGCTAAAA 59.228 50.000 0.00 0.00 0.00 1.52
3050 3249 0.037160 TGGTTCCCTCCCGCTAAAAC 59.963 55.000 0.00 0.00 0.00 2.43
3051 3250 0.037160 GGTTCCCTCCCGCTAAAACA 59.963 55.000 0.00 0.00 0.00 2.83
3052 3251 1.162698 GTTCCCTCCCGCTAAAACAC 58.837 55.000 0.00 0.00 0.00 3.32
3053 3252 0.037160 TTCCCTCCCGCTAAAACACC 59.963 55.000 0.00 0.00 0.00 4.16
3054 3253 1.743995 CCCTCCCGCTAAAACACCG 60.744 63.158 0.00 0.00 0.00 4.94
3055 3254 1.743995 CCTCCCGCTAAAACACCGG 60.744 63.158 0.00 0.00 41.60 5.28
3059 3258 3.464207 CCGCTAAAACACCGGGTAT 57.536 52.632 6.32 0.00 38.42 2.73
3060 3259 2.600470 CCGCTAAAACACCGGGTATA 57.400 50.000 6.32 0.00 38.42 1.47
3061 3260 2.476821 CCGCTAAAACACCGGGTATAG 58.523 52.381 6.32 8.57 38.42 1.31
3062 3261 2.101249 CCGCTAAAACACCGGGTATAGA 59.899 50.000 6.32 0.00 38.42 1.98
3063 3262 3.118542 CGCTAAAACACCGGGTATAGAC 58.881 50.000 6.32 4.13 0.00 2.59
3064 3263 3.429272 CGCTAAAACACCGGGTATAGACA 60.429 47.826 6.32 0.00 0.00 3.41
3065 3264 3.867493 GCTAAAACACCGGGTATAGACAC 59.133 47.826 6.32 0.00 0.00 3.67
3066 3265 4.382362 GCTAAAACACCGGGTATAGACACT 60.382 45.833 6.32 0.00 0.00 3.55
3067 3266 4.628963 AAAACACCGGGTATAGACACTT 57.371 40.909 6.32 0.00 0.00 3.16
3068 3267 4.628963 AAACACCGGGTATAGACACTTT 57.371 40.909 6.32 0.00 0.00 2.66
3069 3268 3.881937 ACACCGGGTATAGACACTTTC 57.118 47.619 6.32 0.00 0.00 2.62
3070 3269 2.165030 ACACCGGGTATAGACACTTTCG 59.835 50.000 6.32 0.00 0.00 3.46
3071 3270 2.165030 CACCGGGTATAGACACTTTCGT 59.835 50.000 6.32 0.00 0.00 3.85
3072 3271 2.827921 ACCGGGTATAGACACTTTCGTT 59.172 45.455 6.32 0.00 0.00 3.85
3073 3272 3.184541 CCGGGTATAGACACTTTCGTTG 58.815 50.000 0.00 0.00 0.00 4.10
3074 3273 2.601763 CGGGTATAGACACTTTCGTTGC 59.398 50.000 0.00 0.00 0.00 4.17
3075 3274 2.601763 GGGTATAGACACTTTCGTTGCG 59.398 50.000 0.00 0.00 0.00 4.85
3076 3275 2.601763 GGTATAGACACTTTCGTTGCGG 59.398 50.000 0.00 0.00 0.00 5.69
3077 3276 1.076332 ATAGACACTTTCGTTGCGGC 58.924 50.000 0.00 0.00 0.00 6.53
3078 3277 0.947180 TAGACACTTTCGTTGCGGCC 60.947 55.000 0.00 0.00 0.00 6.13
3079 3278 2.515057 ACACTTTCGTTGCGGCCA 60.515 55.556 2.24 0.00 0.00 5.36
3080 3279 2.051345 CACTTTCGTTGCGGCCAC 60.051 61.111 2.24 0.00 0.00 5.01
3081 3280 3.284449 ACTTTCGTTGCGGCCACC 61.284 61.111 2.24 0.00 0.00 4.61
3095 3294 2.919228 GGCCACCGATGAAAAGTATCT 58.081 47.619 0.00 0.00 0.00 1.98
3096 3295 2.872858 GGCCACCGATGAAAAGTATCTC 59.127 50.000 0.00 0.00 0.00 2.75
3097 3296 3.432326 GGCCACCGATGAAAAGTATCTCT 60.432 47.826 0.00 0.00 0.00 3.10
3098 3297 4.192317 GCCACCGATGAAAAGTATCTCTT 58.808 43.478 0.00 0.00 38.10 2.85
3099 3298 4.271291 GCCACCGATGAAAAGTATCTCTTC 59.729 45.833 0.00 0.00 35.02 2.87
3100 3299 5.419542 CCACCGATGAAAAGTATCTCTTCA 58.580 41.667 0.00 0.00 35.02 3.02
3101 3300 6.051717 CCACCGATGAAAAGTATCTCTTCAT 58.948 40.000 0.00 0.00 41.37 2.57
3102 3301 6.540189 CCACCGATGAAAAGTATCTCTTCATT 59.460 38.462 0.85 0.00 39.34 2.57
3103 3302 7.066284 CCACCGATGAAAAGTATCTCTTCATTT 59.934 37.037 0.85 0.00 39.34 2.32
3104 3303 8.454106 CACCGATGAAAAGTATCTCTTCATTTT 58.546 33.333 0.85 0.00 39.34 1.82
3105 3304 9.014297 ACCGATGAAAAGTATCTCTTCATTTTT 57.986 29.630 0.85 0.00 39.34 1.94
3145 3344 9.524106 TGAAATGAAATTGATATCAACATCAGC 57.476 29.630 26.40 20.88 36.10 4.26
3146 3345 9.524106 GAAATGAAATTGATATCAACATCAGCA 57.476 29.630 26.40 17.50 36.10 4.41
3147 3346 9.878667 AAATGAAATTGATATCAACATCAGCAA 57.121 25.926 26.40 12.97 36.10 3.91
3148 3347 9.529325 AATGAAATTGATATCAACATCAGCAAG 57.471 29.630 26.40 0.00 38.86 4.01
3149 3348 8.283699 TGAAATTGATATCAACATCAGCAAGA 57.716 30.769 20.19 2.79 38.86 3.02
3150 3349 8.186163 TGAAATTGATATCAACATCAGCAAGAC 58.814 33.333 20.19 3.43 38.86 3.01
3151 3350 7.876936 AATTGATATCAACATCAGCAAGACT 57.123 32.000 20.19 0.00 38.86 3.24
3152 3351 8.969260 AATTGATATCAACATCAGCAAGACTA 57.031 30.769 20.19 0.00 38.86 2.59
3153 3352 7.776933 TTGATATCAACATCAGCAAGACTAC 57.223 36.000 14.23 0.00 36.34 2.73
3154 3353 6.877236 TGATATCAACATCAGCAAGACTACA 58.123 36.000 1.98 0.00 31.34 2.74
3155 3354 7.330262 TGATATCAACATCAGCAAGACTACAA 58.670 34.615 1.98 0.00 31.34 2.41
3156 3355 5.869753 ATCAACATCAGCAAGACTACAAC 57.130 39.130 0.00 0.00 0.00 3.32
3157 3356 4.702831 TCAACATCAGCAAGACTACAACA 58.297 39.130 0.00 0.00 0.00 3.33
3158 3357 5.122519 TCAACATCAGCAAGACTACAACAA 58.877 37.500 0.00 0.00 0.00 2.83
3159 3358 5.007626 TCAACATCAGCAAGACTACAACAAC 59.992 40.000 0.00 0.00 0.00 3.32
3160 3359 4.450976 ACATCAGCAAGACTACAACAACA 58.549 39.130 0.00 0.00 0.00 3.33
3161 3360 4.273480 ACATCAGCAAGACTACAACAACAC 59.727 41.667 0.00 0.00 0.00 3.32
3162 3361 3.202906 TCAGCAAGACTACAACAACACC 58.797 45.455 0.00 0.00 0.00 4.16
3163 3362 2.942376 CAGCAAGACTACAACAACACCA 59.058 45.455 0.00 0.00 0.00 4.17
3164 3363 3.565482 CAGCAAGACTACAACAACACCAT 59.435 43.478 0.00 0.00 0.00 3.55
3165 3364 4.036734 CAGCAAGACTACAACAACACCATT 59.963 41.667 0.00 0.00 0.00 3.16
3166 3365 4.275936 AGCAAGACTACAACAACACCATTC 59.724 41.667 0.00 0.00 0.00 2.67
3167 3366 4.036262 GCAAGACTACAACAACACCATTCA 59.964 41.667 0.00 0.00 0.00 2.57
3168 3367 5.510671 CAAGACTACAACAACACCATTCAC 58.489 41.667 0.00 0.00 0.00 3.18
3169 3368 4.776349 AGACTACAACAACACCATTCACA 58.224 39.130 0.00 0.00 0.00 3.58
3170 3369 5.376625 AGACTACAACAACACCATTCACAT 58.623 37.500 0.00 0.00 0.00 3.21
3171 3370 5.827797 AGACTACAACAACACCATTCACATT 59.172 36.000 0.00 0.00 0.00 2.71
3172 3371 6.017109 AGACTACAACAACACCATTCACATTC 60.017 38.462 0.00 0.00 0.00 2.67
3173 3372 4.998671 ACAACAACACCATTCACATTCA 57.001 36.364 0.00 0.00 0.00 2.57
3174 3373 5.336150 ACAACAACACCATTCACATTCAA 57.664 34.783 0.00 0.00 0.00 2.69
3175 3374 5.728471 ACAACAACACCATTCACATTCAAA 58.272 33.333 0.00 0.00 0.00 2.69
3176 3375 6.347696 ACAACAACACCATTCACATTCAAAT 58.652 32.000 0.00 0.00 0.00 2.32
3177 3376 7.495901 ACAACAACACCATTCACATTCAAATA 58.504 30.769 0.00 0.00 0.00 1.40
3178 3377 7.437862 ACAACAACACCATTCACATTCAAATAC 59.562 33.333 0.00 0.00 0.00 1.89
3179 3378 7.048629 ACAACACCATTCACATTCAAATACA 57.951 32.000 0.00 0.00 0.00 2.29
3180 3379 7.495901 ACAACACCATTCACATTCAAATACAA 58.504 30.769 0.00 0.00 0.00 2.41
3181 3380 8.149647 ACAACACCATTCACATTCAAATACAAT 58.850 29.630 0.00 0.00 0.00 2.71
3182 3381 8.991026 CAACACCATTCACATTCAAATACAATT 58.009 29.630 0.00 0.00 0.00 2.32
3183 3382 8.761575 ACACCATTCACATTCAAATACAATTC 57.238 30.769 0.00 0.00 0.00 2.17
3184 3383 8.366401 ACACCATTCACATTCAAATACAATTCA 58.634 29.630 0.00 0.00 0.00 2.57
3185 3384 9.205719 CACCATTCACATTCAAATACAATTCAA 57.794 29.630 0.00 0.00 0.00 2.69
3186 3385 9.775854 ACCATTCACATTCAAATACAATTCAAA 57.224 25.926 0.00 0.00 0.00 2.69
3208 3407 9.708092 TCAAATGAAATTGAATATTTGACAGCA 57.292 25.926 9.39 0.00 41.78 4.41
3209 3408 9.967245 CAAATGAAATTGAATATTTGACAGCAG 57.033 29.630 6.17 0.00 40.94 4.24
3210 3409 7.766219 ATGAAATTGAATATTTGACAGCAGC 57.234 32.000 0.00 0.00 0.00 5.25
3211 3410 6.689554 TGAAATTGAATATTTGACAGCAGCA 58.310 32.000 0.00 0.00 0.00 4.41
3212 3411 7.153315 TGAAATTGAATATTTGACAGCAGCAA 58.847 30.769 0.00 0.00 0.00 3.91
3213 3412 6.956299 AATTGAATATTTGACAGCAGCAAC 57.044 33.333 0.00 0.00 0.00 4.17
3214 3413 5.450592 TTGAATATTTGACAGCAGCAACA 57.549 34.783 0.00 0.00 0.00 3.33
3215 3414 5.450592 TGAATATTTGACAGCAGCAACAA 57.549 34.783 0.00 0.00 0.00 2.83
3216 3415 5.221880 TGAATATTTGACAGCAGCAACAAC 58.778 37.500 0.00 0.00 0.00 3.32
3217 3416 2.514205 ATTTGACAGCAGCAACAACC 57.486 45.000 0.00 0.00 0.00 3.77
3218 3417 1.180907 TTTGACAGCAGCAACAACCA 58.819 45.000 0.00 0.00 0.00 3.67
3219 3418 1.401761 TTGACAGCAGCAACAACCAT 58.598 45.000 0.00 0.00 0.00 3.55
3220 3419 1.401761 TGACAGCAGCAACAACCATT 58.598 45.000 0.00 0.00 0.00 3.16
3221 3420 2.580962 TGACAGCAGCAACAACCATTA 58.419 42.857 0.00 0.00 0.00 1.90
3222 3421 3.156293 TGACAGCAGCAACAACCATTAT 58.844 40.909 0.00 0.00 0.00 1.28
3223 3422 4.331108 TGACAGCAGCAACAACCATTATA 58.669 39.130 0.00 0.00 0.00 0.98
3224 3423 4.395854 TGACAGCAGCAACAACCATTATAG 59.604 41.667 0.00 0.00 0.00 1.31
3225 3424 3.129287 ACAGCAGCAACAACCATTATAGC 59.871 43.478 0.00 0.00 0.00 2.97
3226 3425 3.129113 CAGCAGCAACAACCATTATAGCA 59.871 43.478 0.00 0.00 0.00 3.49
3227 3426 3.379372 AGCAGCAACAACCATTATAGCAG 59.621 43.478 0.00 0.00 0.00 4.24
3228 3427 3.378112 GCAGCAACAACCATTATAGCAGA 59.622 43.478 0.00 0.00 0.00 4.26
3229 3428 4.037208 GCAGCAACAACCATTATAGCAGAT 59.963 41.667 0.00 0.00 0.00 2.90
3230 3429 5.755813 CAGCAACAACCATTATAGCAGATC 58.244 41.667 0.00 0.00 0.00 2.75
3231 3430 5.297527 CAGCAACAACCATTATAGCAGATCA 59.702 40.000 0.00 0.00 0.00 2.92
3232 3431 5.887598 AGCAACAACCATTATAGCAGATCAA 59.112 36.000 0.00 0.00 0.00 2.57
3233 3432 6.377996 AGCAACAACCATTATAGCAGATCAAA 59.622 34.615 0.00 0.00 0.00 2.69
3234 3433 7.035004 GCAACAACCATTATAGCAGATCAAAA 58.965 34.615 0.00 0.00 0.00 2.44
3235 3434 7.545265 GCAACAACCATTATAGCAGATCAAAAA 59.455 33.333 0.00 0.00 0.00 1.94
3270 3469 9.973450 TCTATAAAATTTTAACAACAGCAGCAA 57.027 25.926 14.35 0.00 0.00 3.91
3272 3471 5.733226 AAATTTTAACAACAGCAGCAACC 57.267 34.783 0.00 0.00 0.00 3.77
3273 3472 3.876274 TTTTAACAACAGCAGCAACCA 57.124 38.095 0.00 0.00 0.00 3.67
3274 3473 4.399004 TTTTAACAACAGCAGCAACCAT 57.601 36.364 0.00 0.00 0.00 3.55
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 7.642569 TTGGTACACCCTAGATCAGGAGAGG 62.643 52.000 11.48 2.66 43.72 3.69
5 6 4.631416 TTGGTACACCCTAGATCAGGAGAG 60.631 50.000 11.48 5.04 43.72 3.20
6 7 3.271225 TTGGTACACCCTAGATCAGGAGA 59.729 47.826 11.48 0.00 43.72 3.71
7 8 3.643237 TTGGTACACCCTAGATCAGGAG 58.357 50.000 11.48 3.27 43.72 3.69
8 9 3.769189 TTGGTACACCCTAGATCAGGA 57.231 47.619 11.48 0.00 43.72 3.86
9 10 3.325135 GGATTGGTACACCCTAGATCAGG 59.675 52.174 0.00 0.00 45.07 3.86
10 11 3.325135 GGGATTGGTACACCCTAGATCAG 59.675 52.174 0.00 0.00 41.04 2.90
11 12 3.314693 GGGATTGGTACACCCTAGATCA 58.685 50.000 0.00 0.00 41.04 2.92
12 13 2.299297 CGGGATTGGTACACCCTAGATC 59.701 54.545 12.45 0.00 41.96 2.75
13 14 2.326428 CGGGATTGGTACACCCTAGAT 58.674 52.381 12.45 0.00 41.96 1.98
14 15 1.007479 ACGGGATTGGTACACCCTAGA 59.993 52.381 12.45 0.00 41.96 2.43
15 16 1.138266 CACGGGATTGGTACACCCTAG 59.862 57.143 12.45 0.00 41.96 3.02
16 17 1.196911 CACGGGATTGGTACACCCTA 58.803 55.000 12.45 0.00 41.96 3.53
17 18 0.545787 TCACGGGATTGGTACACCCT 60.546 55.000 12.45 1.35 41.96 4.34
18 19 0.107848 CTCACGGGATTGGTACACCC 60.108 60.000 0.00 0.00 40.85 4.61
19 20 0.107848 CCTCACGGGATTGGTACACC 60.108 60.000 0.00 0.00 35.49 4.16
20 21 0.899720 TCCTCACGGGATTGGTACAC 59.100 55.000 0.00 0.00 37.32 2.90
21 22 1.553248 CTTCCTCACGGGATTGGTACA 59.447 52.381 0.00 0.00 44.66 2.90
22 23 1.553704 ACTTCCTCACGGGATTGGTAC 59.446 52.381 0.00 0.00 44.66 3.34
23 24 1.946984 ACTTCCTCACGGGATTGGTA 58.053 50.000 0.00 0.00 44.66 3.25
24 25 1.064825 AACTTCCTCACGGGATTGGT 58.935 50.000 0.00 0.00 44.66 3.67
25 26 2.236395 ACTAACTTCCTCACGGGATTGG 59.764 50.000 0.00 0.00 44.66 3.16
26 27 3.611766 ACTAACTTCCTCACGGGATTG 57.388 47.619 0.00 0.00 44.66 2.67
27 28 4.344390 GGATACTAACTTCCTCACGGGATT 59.656 45.833 0.00 0.00 44.66 3.01
28 29 3.896272 GGATACTAACTTCCTCACGGGAT 59.104 47.826 0.00 0.00 44.66 3.85
29 30 3.294214 GGATACTAACTTCCTCACGGGA 58.706 50.000 0.00 0.00 43.41 5.14
30 31 2.364647 GGGATACTAACTTCCTCACGGG 59.635 54.545 0.00 0.00 32.34 5.28
31 32 3.297736 AGGGATACTAACTTCCTCACGG 58.702 50.000 0.00 0.00 32.34 4.94
32 33 4.036971 CAGAGGGATACTAACTTCCTCACG 59.963 50.000 9.88 0.00 44.65 4.35
33 34 4.342665 CCAGAGGGATACTAACTTCCTCAC 59.657 50.000 9.88 0.00 44.65 3.51
34 35 4.232122 TCCAGAGGGATACTAACTTCCTCA 59.768 45.833 9.88 0.00 44.65 3.86
35 36 4.805744 TCCAGAGGGATACTAACTTCCTC 58.194 47.826 0.00 0.00 43.07 3.71
36 37 4.901785 TCCAGAGGGATACTAACTTCCT 57.098 45.455 0.00 0.00 38.64 3.36
49 50 3.085533 CAGGTAGATCGTATCCAGAGGG 58.914 54.545 0.00 0.00 0.00 4.30
50 51 2.490115 GCAGGTAGATCGTATCCAGAGG 59.510 54.545 0.00 0.00 0.00 3.69
51 52 3.149981 TGCAGGTAGATCGTATCCAGAG 58.850 50.000 0.00 0.00 0.00 3.35
52 53 3.149981 CTGCAGGTAGATCGTATCCAGA 58.850 50.000 5.57 0.00 0.00 3.86
53 54 2.887783 ACTGCAGGTAGATCGTATCCAG 59.112 50.000 19.93 0.00 0.00 3.86
54 55 2.945456 ACTGCAGGTAGATCGTATCCA 58.055 47.619 19.93 0.00 0.00 3.41
55 56 3.190953 GGTACTGCAGGTAGATCGTATCC 59.809 52.174 19.93 0.87 0.00 2.59
56 57 3.120269 CGGTACTGCAGGTAGATCGTATC 60.120 52.174 19.93 0.00 0.00 2.24
57 58 2.812591 CGGTACTGCAGGTAGATCGTAT 59.187 50.000 19.93 0.00 0.00 3.06
58 59 2.216046 CGGTACTGCAGGTAGATCGTA 58.784 52.381 19.93 0.00 0.00 3.43
59 60 1.022735 CGGTACTGCAGGTAGATCGT 58.977 55.000 19.93 0.00 0.00 3.73
60 61 1.022735 ACGGTACTGCAGGTAGATCG 58.977 55.000 19.93 14.17 0.00 3.69
61 62 1.067212 CCACGGTACTGCAGGTAGATC 59.933 57.143 19.93 0.00 0.00 2.75
62 63 1.112113 CCACGGTACTGCAGGTAGAT 58.888 55.000 19.93 0.00 0.00 1.98
63 64 0.251474 ACCACGGTACTGCAGGTAGA 60.251 55.000 19.93 0.00 0.00 2.59
64 65 1.466856 TACCACGGTACTGCAGGTAG 58.533 55.000 19.93 8.84 33.91 3.18
65 66 2.026641 GATACCACGGTACTGCAGGTA 58.973 52.381 22.09 22.09 39.00 3.08
66 67 0.822164 GATACCACGGTACTGCAGGT 59.178 55.000 19.93 19.77 36.40 4.00
67 68 0.104304 GGATACCACGGTACTGCAGG 59.896 60.000 19.93 11.26 33.01 4.85
68 69 3.661745 GGATACCACGGTACTGCAG 57.338 57.895 13.48 13.48 33.01 4.41
81 82 4.223255 GGGGATTCTACTTGCTAGGGATAC 59.777 50.000 0.00 0.00 0.00 2.24
82 83 4.426704 GGGGATTCTACTTGCTAGGGATA 58.573 47.826 0.00 0.00 0.00 2.59
83 84 3.252351 GGGGATTCTACTTGCTAGGGAT 58.748 50.000 0.00 0.00 0.00 3.85
84 85 2.690840 GGGGATTCTACTTGCTAGGGA 58.309 52.381 0.00 0.00 0.00 4.20
85 86 1.700186 GGGGGATTCTACTTGCTAGGG 59.300 57.143 0.00 0.00 0.00 3.53
102 103 1.221840 CGGATGACACAAGAGGGGG 59.778 63.158 0.00 0.00 0.00 5.40
103 104 1.450312 GCGGATGACACAAGAGGGG 60.450 63.158 0.00 0.00 0.00 4.79
104 105 1.450312 GGCGGATGACACAAGAGGG 60.450 63.158 0.00 0.00 0.00 4.30
105 106 0.742281 CTGGCGGATGACACAAGAGG 60.742 60.000 0.00 0.00 0.00 3.69
106 107 1.364626 GCTGGCGGATGACACAAGAG 61.365 60.000 0.00 0.00 0.00 2.85
107 108 1.375908 GCTGGCGGATGACACAAGA 60.376 57.895 0.00 0.00 0.00 3.02
108 109 1.236616 TTGCTGGCGGATGACACAAG 61.237 55.000 0.00 0.00 0.00 3.16
109 110 1.228094 TTGCTGGCGGATGACACAA 60.228 52.632 0.00 0.00 0.00 3.33
110 111 1.672030 CTTGCTGGCGGATGACACA 60.672 57.895 0.00 0.00 0.00 3.72
111 112 0.391130 TACTTGCTGGCGGATGACAC 60.391 55.000 0.00 0.00 0.00 3.67
112 113 0.108186 CTACTTGCTGGCGGATGACA 60.108 55.000 0.00 0.00 0.00 3.58
113 114 0.811616 CCTACTTGCTGGCGGATGAC 60.812 60.000 0.00 0.00 0.00 3.06
114 115 1.522092 CCTACTTGCTGGCGGATGA 59.478 57.895 0.00 0.00 0.00 2.92
115 116 2.182842 GCCTACTTGCTGGCGGATG 61.183 63.158 0.00 0.00 39.71 3.51
116 117 2.190578 GCCTACTTGCTGGCGGAT 59.809 61.111 0.00 0.00 39.71 4.18
120 121 2.218037 GGCTTTGCCTACTTGCTGGC 62.218 60.000 0.73 0.00 46.69 4.85
121 122 1.885871 GGCTTTGCCTACTTGCTGG 59.114 57.895 0.73 0.00 46.69 4.85
131 132 2.282180 TCCTTGGACGGCTTTGCC 60.282 61.111 0.00 0.00 46.75 4.52
132 133 2.954611 GTCCTTGGACGGCTTTGC 59.045 61.111 3.87 0.00 0.00 3.68
133 134 3.253955 CGTCCTTGGACGGCTTTG 58.746 61.111 28.47 5.23 44.01 2.77
140 141 4.717313 GGTGGCCCGTCCTTGGAC 62.717 72.222 9.62 9.62 35.26 4.02
150 151 1.179814 ATACTCGATCTCGGTGGCCC 61.180 60.000 0.00 0.00 40.29 5.80
151 152 0.674534 AATACTCGATCTCGGTGGCC 59.325 55.000 0.00 0.00 40.29 5.36
152 153 3.243301 TGTTAATACTCGATCTCGGTGGC 60.243 47.826 0.00 0.00 40.29 5.01
153 154 4.288531 GTGTTAATACTCGATCTCGGTGG 58.711 47.826 0.00 0.00 40.29 4.61
154 155 3.966844 CGTGTTAATACTCGATCTCGGTG 59.033 47.826 0.65 0.00 42.24 4.94
155 156 3.624861 ACGTGTTAATACTCGATCTCGGT 59.375 43.478 6.74 0.02 42.24 4.69
156 157 3.966844 CACGTGTTAATACTCGATCTCGG 59.033 47.826 7.58 0.00 42.24 4.63
157 158 4.585364 ACACGTGTTAATACTCGATCTCG 58.415 43.478 17.22 0.00 42.24 4.04
166 167 8.652810 ACCTTTGGATATACACGTGTTAATAC 57.347 34.615 28.55 20.36 0.00 1.89
178 179 4.065789 GCAGTGCCTACCTTTGGATATAC 58.934 47.826 2.85 0.00 0.00 1.47
179 180 3.714280 TGCAGTGCCTACCTTTGGATATA 59.286 43.478 13.72 0.00 0.00 0.86
181 182 1.912731 TGCAGTGCCTACCTTTGGATA 59.087 47.619 13.72 0.00 0.00 2.59
182 183 0.698238 TGCAGTGCCTACCTTTGGAT 59.302 50.000 13.72 0.00 0.00 3.41
183 184 0.698238 ATGCAGTGCCTACCTTTGGA 59.302 50.000 13.72 0.00 0.00 3.53
215 216 9.810545 GTTATCATCTTGCTAGAAGAACTACTT 57.189 33.333 7.16 0.00 42.03 2.24
217 218 9.757227 ATGTTATCATCTTGCTAGAAGAACTAC 57.243 33.333 7.16 6.58 32.38 2.73
226 230 6.233434 TGGCCTAATGTTATCATCTTGCTAG 58.767 40.000 3.32 0.00 32.56 3.42
227 231 6.186420 TGGCCTAATGTTATCATCTTGCTA 57.814 37.500 3.32 0.00 32.56 3.49
229 233 5.772825 TTGGCCTAATGTTATCATCTTGC 57.227 39.130 3.32 0.00 32.56 4.01
240 245 2.423538 GCATTCGAGTTTGGCCTAATGT 59.576 45.455 3.32 0.00 0.00 2.71
296 301 4.818863 TCCCATGCCATGCCACGG 62.819 66.667 0.00 0.00 0.00 4.94
297 302 2.607411 TACTCCCATGCCATGCCACG 62.607 60.000 0.00 0.00 0.00 4.94
298 303 0.395586 TTACTCCCATGCCATGCCAC 60.396 55.000 0.00 0.00 0.00 5.01
299 304 0.106569 CTTACTCCCATGCCATGCCA 60.107 55.000 0.00 0.00 0.00 4.92
300 305 0.106519 ACTTACTCCCATGCCATGCC 60.107 55.000 0.00 0.00 0.00 4.40
301 306 1.027357 CACTTACTCCCATGCCATGC 58.973 55.000 0.00 0.00 0.00 4.06
302 307 2.092753 ACTCACTTACTCCCATGCCATG 60.093 50.000 0.00 0.00 0.00 3.66
303 308 2.092753 CACTCACTTACTCCCATGCCAT 60.093 50.000 0.00 0.00 0.00 4.40
304 309 1.278985 CACTCACTTACTCCCATGCCA 59.721 52.381 0.00 0.00 0.00 4.92
305 310 1.555075 TCACTCACTTACTCCCATGCC 59.445 52.381 0.00 0.00 0.00 4.40
306 311 2.898705 CTCACTCACTTACTCCCATGC 58.101 52.381 0.00 0.00 0.00 4.06
307 312 2.736719 CGCTCACTCACTTACTCCCATG 60.737 54.545 0.00 0.00 0.00 3.66
308 313 1.478510 CGCTCACTCACTTACTCCCAT 59.521 52.381 0.00 0.00 0.00 4.00
309 314 0.888619 CGCTCACTCACTTACTCCCA 59.111 55.000 0.00 0.00 0.00 4.37
310 315 0.889306 ACGCTCACTCACTTACTCCC 59.111 55.000 0.00 0.00 0.00 4.30
311 316 1.983972 CACGCTCACTCACTTACTCC 58.016 55.000 0.00 0.00 0.00 3.85
312 317 1.341606 GCACGCTCACTCACTTACTC 58.658 55.000 0.00 0.00 0.00 2.59
313 318 0.387367 CGCACGCTCACTCACTTACT 60.387 55.000 0.00 0.00 0.00 2.24
314 319 1.945776 GCGCACGCTCACTCACTTAC 61.946 60.000 7.96 0.00 38.26 2.34
315 320 1.733041 GCGCACGCTCACTCACTTA 60.733 57.895 7.96 0.00 38.26 2.24
316 321 3.038417 GCGCACGCTCACTCACTT 61.038 61.111 7.96 0.00 38.26 3.16
319 324 4.942481 AACGCGCACGCTCACTCA 62.942 61.111 13.70 0.00 45.53 3.41
320 325 4.415501 CAACGCGCACGCTCACTC 62.416 66.667 13.70 0.00 45.53 3.51
322 327 4.293626 AACAACGCGCACGCTCAC 62.294 61.111 13.70 0.00 45.53 3.51
323 328 4.292208 CAACAACGCGCACGCTCA 62.292 61.111 13.70 0.00 45.53 4.26
328 333 2.105960 AAGAGAGCAACAACGCGCAC 62.106 55.000 5.73 0.00 36.85 5.34
329 334 1.436195 AAAGAGAGCAACAACGCGCA 61.436 50.000 5.73 0.00 36.85 6.09
330 335 0.722799 GAAAGAGAGCAACAACGCGC 60.723 55.000 5.73 0.00 36.85 6.86
331 336 0.861837 AGAAAGAGAGCAACAACGCG 59.138 50.000 3.53 3.53 36.85 6.01
332 337 4.398247 CATAAGAAAGAGAGCAACAACGC 58.602 43.478 0.00 0.00 0.00 4.84
333 338 4.153117 AGCATAAGAAAGAGAGCAACAACG 59.847 41.667 0.00 0.00 0.00 4.10
334 339 5.619625 AGCATAAGAAAGAGAGCAACAAC 57.380 39.130 0.00 0.00 0.00 3.32
335 340 6.230472 TGTAGCATAAGAAAGAGAGCAACAA 58.770 36.000 0.00 0.00 0.00 2.83
336 341 5.793817 TGTAGCATAAGAAAGAGAGCAACA 58.206 37.500 0.00 0.00 0.00 3.33
337 342 6.370166 AGTTGTAGCATAAGAAAGAGAGCAAC 59.630 38.462 0.00 0.00 33.69 4.17
338 343 6.369890 CAGTTGTAGCATAAGAAAGAGAGCAA 59.630 38.462 0.00 0.00 0.00 3.91
339 344 5.871524 CAGTTGTAGCATAAGAAAGAGAGCA 59.128 40.000 0.00 0.00 0.00 4.26
340 345 5.293079 CCAGTTGTAGCATAAGAAAGAGAGC 59.707 44.000 0.00 0.00 0.00 4.09
341 346 5.293079 GCCAGTTGTAGCATAAGAAAGAGAG 59.707 44.000 0.00 0.00 0.00 3.20
342 347 5.178797 GCCAGTTGTAGCATAAGAAAGAGA 58.821 41.667 0.00 0.00 0.00 3.10
343 348 4.937620 TGCCAGTTGTAGCATAAGAAAGAG 59.062 41.667 0.00 0.00 33.08 2.85
344 349 4.905429 TGCCAGTTGTAGCATAAGAAAGA 58.095 39.130 0.00 0.00 33.08 2.52
345 350 4.697352 ACTGCCAGTTGTAGCATAAGAAAG 59.303 41.667 0.00 0.00 38.56 2.62
346 351 4.651778 ACTGCCAGTTGTAGCATAAGAAA 58.348 39.130 0.00 0.00 38.56 2.52
347 352 4.286297 ACTGCCAGTTGTAGCATAAGAA 57.714 40.909 0.00 0.00 38.56 2.52
348 353 3.981071 ACTGCCAGTTGTAGCATAAGA 57.019 42.857 0.00 0.00 38.56 2.10
349 354 4.503910 TGTACTGCCAGTTGTAGCATAAG 58.496 43.478 1.02 0.00 38.56 1.73
350 355 4.545208 TGTACTGCCAGTTGTAGCATAA 57.455 40.909 1.02 0.00 38.56 1.90
351 356 4.250464 GTTGTACTGCCAGTTGTAGCATA 58.750 43.478 1.02 0.00 38.56 3.14
352 357 3.074412 GTTGTACTGCCAGTTGTAGCAT 58.926 45.455 1.02 0.00 38.56 3.79
353 358 2.158885 TGTTGTACTGCCAGTTGTAGCA 60.159 45.455 1.02 0.00 37.46 3.49
354 359 2.489971 TGTTGTACTGCCAGTTGTAGC 58.510 47.619 1.02 0.00 0.00 3.58
355 360 3.250040 GGTTGTTGTACTGCCAGTTGTAG 59.750 47.826 1.02 0.00 0.00 2.74
356 361 3.207778 GGTTGTTGTACTGCCAGTTGTA 58.792 45.455 1.02 0.00 0.00 2.41
357 362 2.021457 GGTTGTTGTACTGCCAGTTGT 58.979 47.619 1.02 0.00 0.00 3.32
358 363 2.020720 TGGTTGTTGTACTGCCAGTTG 58.979 47.619 1.02 0.00 0.00 3.16
359 364 2.428544 TGGTTGTTGTACTGCCAGTT 57.571 45.000 1.02 0.00 0.00 3.16
360 365 2.229792 CATGGTTGTTGTACTGCCAGT 58.770 47.619 1.54 1.54 32.28 4.00
361 366 1.068333 GCATGGTTGTTGTACTGCCAG 60.068 52.381 0.00 0.00 32.28 4.85
362 367 0.958091 GCATGGTTGTTGTACTGCCA 59.042 50.000 0.00 0.00 0.00 4.92
363 368 1.247567 AGCATGGTTGTTGTACTGCC 58.752 50.000 0.00 0.00 0.00 4.85
364 369 3.074412 AGTAGCATGGTTGTTGTACTGC 58.926 45.455 1.12 0.00 0.00 4.40
365 370 4.569943 AGAGTAGCATGGTTGTTGTACTG 58.430 43.478 1.12 0.00 0.00 2.74
366 371 4.891992 AGAGTAGCATGGTTGTTGTACT 57.108 40.909 1.12 0.00 0.00 2.73
367 372 5.238583 AGAAGAGTAGCATGGTTGTTGTAC 58.761 41.667 1.12 0.00 0.00 2.90
368 373 5.483685 AGAAGAGTAGCATGGTTGTTGTA 57.516 39.130 1.12 0.00 0.00 2.41
369 374 4.357918 AGAAGAGTAGCATGGTTGTTGT 57.642 40.909 1.12 0.00 0.00 3.32
370 375 6.428159 AGTTAAGAAGAGTAGCATGGTTGTTG 59.572 38.462 1.12 0.00 0.00 3.33
371 376 6.534634 AGTTAAGAAGAGTAGCATGGTTGTT 58.465 36.000 1.12 0.00 0.00 2.83
372 377 6.115448 AGTTAAGAAGAGTAGCATGGTTGT 57.885 37.500 1.12 0.00 0.00 3.32
373 378 6.256757 GCTAGTTAAGAAGAGTAGCATGGTTG 59.743 42.308 1.12 0.00 42.76 3.77
395 400 5.180492 GTGCACAAGTTTTACCATACTGCTA 59.820 40.000 13.17 0.00 0.00 3.49
408 413 2.692557 TGCATGGTAAGTGCACAAGTTT 59.307 40.909 21.04 6.97 46.76 2.66
409 414 2.305928 TGCATGGTAAGTGCACAAGTT 58.694 42.857 21.04 7.37 46.76 2.66
431 438 8.351495 TCACAAATCTGCAAGTTTTATTTGAC 57.649 30.769 11.76 0.00 38.99 3.18
432 439 8.939201 TTCACAAATCTGCAAGTTTTATTTGA 57.061 26.923 11.76 5.94 38.99 2.69
445 452 5.618056 TGATCTGAACTTCACAAATCTGC 57.382 39.130 0.00 0.00 0.00 4.26
478 485 6.708949 GGCAATTTCATGCTAATTCATTGGAT 59.291 34.615 0.00 0.00 45.68 3.41
494 501 6.839124 ATCAACTGTGAATAGGCAATTTCA 57.161 33.333 0.00 0.00 37.30 2.69
505 512 9.334947 CCATACTCTTCATTATCAACTGTGAAT 57.665 33.333 0.00 0.00 37.30 2.57
510 517 8.331022 CGTTTCCATACTCTTCATTATCAACTG 58.669 37.037 0.00 0.00 0.00 3.16
536 543 4.871933 AACCAGATTGATGGGTGAAAAC 57.128 40.909 0.00 0.00 45.25 2.43
540 547 5.191727 ACATAAACCAGATTGATGGGTGA 57.808 39.130 0.00 0.00 45.25 4.02
560 567 9.398538 ACTAACAATGAGTAACTGGTTTAAACA 57.601 29.630 19.57 5.63 0.00 2.83
590 597 5.451937 CCATCAATCAAGCATCTGCAGAATT 60.452 40.000 22.50 11.79 45.16 2.17
704 750 1.972795 AGTGCAAAGCCCATGTTCATT 59.027 42.857 0.00 0.00 0.00 2.57
706 752 0.961019 GAGTGCAAAGCCCATGTTCA 59.039 50.000 0.00 0.00 0.00 3.18
720 767 0.109504 GAGACTGACTGACCGAGTGC 60.110 60.000 0.00 0.00 33.83 4.40
742 795 2.903855 GGGCGTGATCCATGCAGG 60.904 66.667 12.46 0.00 46.93 4.85
805 858 4.109050 GTCAAATTGTTTTCGACTGCCAA 58.891 39.130 0.00 0.00 0.00 4.52
825 878 7.065120 TGAGGAGTGTACTATAGGAGTAGTC 57.935 44.000 4.43 0.51 41.47 2.59
832 885 4.389382 CGACGATGAGGAGTGTACTATAGG 59.611 50.000 4.43 0.00 0.00 2.57
934 998 2.580276 GCATTCCGTCGGTGGGTA 59.420 61.111 11.88 0.00 0.00 3.69
964 1041 1.822371 AGGTTTGTTGGTGGTGTTGAC 59.178 47.619 0.00 0.00 0.00 3.18
977 1065 2.430367 GTGGGCGGAGAGGTTTGT 59.570 61.111 0.00 0.00 0.00 2.83
990 1078 3.864686 CGCGCCATCTTTCGTGGG 61.865 66.667 0.00 0.00 37.22 4.61
994 1121 3.929948 GAGCCGCGCCATCTTTCG 61.930 66.667 0.00 0.00 0.00 3.46
1022 1155 2.028190 CTAGCGAGACGGCCATGG 59.972 66.667 7.63 7.63 0.00 3.66
1024 1157 3.917760 GGCTAGCGAGACGGCCAT 61.918 66.667 9.00 0.00 43.59 4.40
1322 1458 2.599757 GGGTTGTACGGGAAGGCCT 61.600 63.158 0.00 0.00 0.00 5.19
2197 2355 2.034221 GAACCCCAGCCGCTTCTT 59.966 61.111 0.00 0.00 0.00 2.52
2198 2356 4.394712 CGAACCCCAGCCGCTTCT 62.395 66.667 0.00 0.00 0.00 2.85
2259 2417 3.900892 GCCTAGGCGCTGCGAGTA 61.901 66.667 28.07 14.41 0.00 2.59
2275 2433 9.341899 GATTTATTATCACCGACCATAAAATGC 57.658 33.333 0.00 0.00 0.00 3.56
2375 2539 2.247267 CGGAACCGCGTGACAAAC 59.753 61.111 4.92 0.00 0.00 2.93
2392 2556 4.006319 GGGTGAATATCTCTTAGCATGGC 58.994 47.826 0.00 0.00 0.00 4.40
2395 2564 6.460103 AATGGGGTGAATATCTCTTAGCAT 57.540 37.500 0.00 0.00 0.00 3.79
2450 2619 7.649306 GCTACTTGCCCAATTGTTTGAATATAG 59.351 37.037 4.43 0.00 33.27 1.31
2546 2733 9.288576 TCATGTGATGTTTGACTTAAGAGAAAT 57.711 29.630 10.09 0.00 0.00 2.17
2620 2808 9.964303 TGTTACTGTAGACGTTGATACTTTTAA 57.036 29.630 0.00 0.00 0.00 1.52
2695 2887 1.533731 GAACCGGACAGAAAAATCGCA 59.466 47.619 9.46 0.00 0.00 5.10
2726 2922 6.288294 ACAATGAATAATAGCGCTTGGACTA 58.712 36.000 18.68 0.00 0.00 2.59
2727 2923 5.126067 ACAATGAATAATAGCGCTTGGACT 58.874 37.500 18.68 0.00 0.00 3.85
2733 2929 6.520272 AGAGAGAACAATGAATAATAGCGCT 58.480 36.000 17.26 17.26 0.00 5.92
2737 2933 8.869109 AGGGAGAGAGAGAACAATGAATAATAG 58.131 37.037 0.00 0.00 0.00 1.73
2739 2935 7.568366 AGAGGGAGAGAGAGAACAATGAATAAT 59.432 37.037 0.00 0.00 0.00 1.28
2744 2940 4.017591 AGAGAGGGAGAGAGAGAACAATGA 60.018 45.833 0.00 0.00 0.00 2.57
2745 2941 4.280819 AGAGAGGGAGAGAGAGAACAATG 58.719 47.826 0.00 0.00 0.00 2.82
2746 2942 4.230502 AGAGAGAGGGAGAGAGAGAACAAT 59.769 45.833 0.00 0.00 0.00 2.71
2748 2944 3.189606 AGAGAGAGGGAGAGAGAGAACA 58.810 50.000 0.00 0.00 0.00 3.18
2749 2945 3.433740 GGAGAGAGAGGGAGAGAGAGAAC 60.434 56.522 0.00 0.00 0.00 3.01
2750 2946 2.777692 GGAGAGAGAGGGAGAGAGAGAA 59.222 54.545 0.00 0.00 0.00 2.87
2751 2947 2.408565 GGAGAGAGAGGGAGAGAGAGA 58.591 57.143 0.00 0.00 0.00 3.10
2752 2948 1.421646 GGGAGAGAGAGGGAGAGAGAG 59.578 61.905 0.00 0.00 0.00 3.20
2753 2949 1.010793 AGGGAGAGAGAGGGAGAGAGA 59.989 57.143 0.00 0.00 0.00 3.10
2754 2950 1.421646 GAGGGAGAGAGAGGGAGAGAG 59.578 61.905 0.00 0.00 0.00 3.20
2755 2951 1.518367 GAGGGAGAGAGAGGGAGAGA 58.482 60.000 0.00 0.00 0.00 3.10
2756 2952 0.478507 GGAGGGAGAGAGAGGGAGAG 59.521 65.000 0.00 0.00 0.00 3.20
2757 2953 0.996762 GGGAGGGAGAGAGAGGGAGA 60.997 65.000 0.00 0.00 0.00 3.71
2758 2954 1.541672 GGGAGGGAGAGAGAGGGAG 59.458 68.421 0.00 0.00 0.00 4.30
2759 2955 2.015726 GGGGAGGGAGAGAGAGGGA 61.016 68.421 0.00 0.00 0.00 4.20
2760 2956 2.612251 GGGGAGGGAGAGAGAGGG 59.388 72.222 0.00 0.00 0.00 4.30
2761 2957 2.018086 AGGGGGAGGGAGAGAGAGG 61.018 68.421 0.00 0.00 0.00 3.69
2771 2967 0.551879 TAACGAGAGAGAGGGGGAGG 59.448 60.000 0.00 0.00 0.00 4.30
2775 2971 2.099921 CACACATAACGAGAGAGAGGGG 59.900 54.545 0.00 0.00 0.00 4.79
2777 2973 3.692101 AGACACACATAACGAGAGAGAGG 59.308 47.826 0.00 0.00 0.00 3.69
2812 3011 5.007724 CCTGTCTCACCTTGTACAGTTTTTC 59.992 44.000 0.00 0.00 38.10 2.29
2818 3017 1.344438 TGCCTGTCTCACCTTGTACAG 59.656 52.381 0.00 0.00 39.22 2.74
2821 3020 0.976641 CCTGCCTGTCTCACCTTGTA 59.023 55.000 0.00 0.00 0.00 2.41
2822 3021 0.764369 TCCTGCCTGTCTCACCTTGT 60.764 55.000 0.00 0.00 0.00 3.16
2832 3031 6.101150 TGGTACTAATATTGAATCCTGCCTGT 59.899 38.462 0.00 0.00 0.00 4.00
2835 3034 5.705905 GGTGGTACTAATATTGAATCCTGCC 59.294 44.000 0.00 0.75 0.00 4.85
2847 3046 2.366266 GTGATGCGGGGTGGTACTAATA 59.634 50.000 0.00 0.00 0.00 0.98
2848 3047 1.140252 GTGATGCGGGGTGGTACTAAT 59.860 52.381 0.00 0.00 0.00 1.73
2849 3048 0.538118 GTGATGCGGGGTGGTACTAA 59.462 55.000 0.00 0.00 0.00 2.24
2850 3049 1.332144 GGTGATGCGGGGTGGTACTA 61.332 60.000 0.00 0.00 0.00 1.82
2851 3050 2.666098 GGTGATGCGGGGTGGTACT 61.666 63.158 0.00 0.00 0.00 2.73
2852 3051 2.124860 GGTGATGCGGGGTGGTAC 60.125 66.667 0.00 0.00 0.00 3.34
2853 3052 3.404438 GGGTGATGCGGGGTGGTA 61.404 66.667 0.00 0.00 0.00 3.25
2900 3099 2.203126 CTCCAATCCTGGCTCGGC 60.203 66.667 0.00 0.00 43.17 5.54
2901 3100 2.203126 GCTCCAATCCTGGCTCGG 60.203 66.667 0.00 0.00 43.17 4.63
2902 3101 1.078214 TTGCTCCAATCCTGGCTCG 60.078 57.895 0.00 0.00 43.17 5.03
2903 3102 1.382692 GCTTGCTCCAATCCTGGCTC 61.383 60.000 0.00 0.00 43.17 4.70
2904 3103 1.379576 GCTTGCTCCAATCCTGGCT 60.380 57.895 0.00 0.00 43.17 4.75
2905 3104 2.421399 GGCTTGCTCCAATCCTGGC 61.421 63.158 0.00 0.00 43.17 4.85
2906 3105 1.755783 GGGCTTGCTCCAATCCTGG 60.756 63.158 0.00 0.00 45.08 4.45
2907 3106 1.000521 TGGGCTTGCTCCAATCCTG 60.001 57.895 1.36 0.00 31.20 3.86
2908 3107 1.305623 CTGGGCTTGCTCCAATCCT 59.694 57.895 4.81 0.00 31.20 3.24
2909 3108 1.755783 CCTGGGCTTGCTCCAATCC 60.756 63.158 4.81 0.00 33.36 3.01
2910 3109 1.755783 CCCTGGGCTTGCTCCAATC 60.756 63.158 0.00 0.00 33.36 2.67
2911 3110 2.361771 CCCTGGGCTTGCTCCAAT 59.638 61.111 0.00 0.00 33.36 3.16
2912 3111 4.684134 GCCCTGGGCTTGCTCCAA 62.684 66.667 30.42 0.00 46.69 3.53
2939 3138 4.663636 ATTCTCTCGCGACGAAATTTTT 57.336 36.364 16.96 1.70 34.74 1.94
2940 3139 4.663636 AATTCTCTCGCGACGAAATTTT 57.336 36.364 16.96 7.30 34.74 1.82
2941 3140 4.663636 AAATTCTCTCGCGACGAAATTT 57.336 36.364 16.96 17.49 34.74 1.82
2942 3141 4.663636 AAAATTCTCTCGCGACGAAATT 57.336 36.364 16.96 13.17 34.74 1.82
2943 3142 4.663636 AAAAATTCTCTCGCGACGAAAT 57.336 36.364 16.96 8.63 34.74 2.17
2963 3162 4.939509 GCTATAGCTTGACGGACAAAAA 57.060 40.909 17.75 0.00 38.08 1.94
2977 3176 9.581099 GAGGTATTCTTTTGAGATAGCTATAGC 57.419 37.037 17.33 17.33 42.49 2.97
2986 3185 8.854117 GCCATATTTGAGGTATTCTTTTGAGAT 58.146 33.333 0.00 0.00 0.00 2.75
2987 3186 8.055181 AGCCATATTTGAGGTATTCTTTTGAGA 58.945 33.333 0.00 0.00 0.00 3.27
2988 3187 8.230472 AGCCATATTTGAGGTATTCTTTTGAG 57.770 34.615 0.00 0.00 0.00 3.02
2989 3188 7.833682 TGAGCCATATTTGAGGTATTCTTTTGA 59.166 33.333 0.00 0.00 0.00 2.69
2990 3189 7.999679 TGAGCCATATTTGAGGTATTCTTTTG 58.000 34.615 0.00 0.00 0.00 2.44
2991 3190 8.470002 GTTGAGCCATATTTGAGGTATTCTTTT 58.530 33.333 0.00 0.00 0.00 2.27
2992 3191 7.836183 AGTTGAGCCATATTTGAGGTATTCTTT 59.164 33.333 0.00 0.00 0.00 2.52
2993 3192 7.284034 CAGTTGAGCCATATTTGAGGTATTCTT 59.716 37.037 0.00 0.00 0.00 2.52
2994 3193 6.769822 CAGTTGAGCCATATTTGAGGTATTCT 59.230 38.462 0.00 0.00 0.00 2.40
2995 3194 6.514048 GCAGTTGAGCCATATTTGAGGTATTC 60.514 42.308 0.00 0.00 0.00 1.75
2996 3195 5.300286 GCAGTTGAGCCATATTTGAGGTATT 59.700 40.000 0.00 0.00 0.00 1.89
2997 3196 4.823989 GCAGTTGAGCCATATTTGAGGTAT 59.176 41.667 0.00 0.00 0.00 2.73
2998 3197 4.199310 GCAGTTGAGCCATATTTGAGGTA 58.801 43.478 0.00 0.00 0.00 3.08
2999 3198 3.019564 GCAGTTGAGCCATATTTGAGGT 58.980 45.455 0.00 0.00 0.00 3.85
3000 3199 3.018856 TGCAGTTGAGCCATATTTGAGG 58.981 45.455 0.00 0.00 0.00 3.86
3001 3200 3.181493 GGTGCAGTTGAGCCATATTTGAG 60.181 47.826 0.00 0.00 0.00 3.02
3002 3201 2.754552 GGTGCAGTTGAGCCATATTTGA 59.245 45.455 0.00 0.00 0.00 2.69
3003 3202 2.492881 TGGTGCAGTTGAGCCATATTTG 59.507 45.455 0.00 0.00 0.00 2.32
3004 3203 2.806434 TGGTGCAGTTGAGCCATATTT 58.194 42.857 0.00 0.00 0.00 1.40
3005 3204 2.512692 TGGTGCAGTTGAGCCATATT 57.487 45.000 0.00 0.00 0.00 1.28
3006 3205 2.512692 TTGGTGCAGTTGAGCCATAT 57.487 45.000 0.00 0.00 0.00 1.78
3007 3206 2.284754 TTTGGTGCAGTTGAGCCATA 57.715 45.000 0.00 0.00 0.00 2.74
3008 3207 1.547372 GATTTGGTGCAGTTGAGCCAT 59.453 47.619 0.00 0.00 0.00 4.40
3009 3208 0.961019 GATTTGGTGCAGTTGAGCCA 59.039 50.000 0.00 0.00 0.00 4.75
3010 3209 1.251251 AGATTTGGTGCAGTTGAGCC 58.749 50.000 0.00 0.00 0.00 4.70
3011 3210 3.054878 CAAAGATTTGGTGCAGTTGAGC 58.945 45.455 0.00 0.00 34.59 4.26
3033 3232 1.162698 GTGTTTTAGCGGGAGGGAAC 58.837 55.000 0.00 0.00 0.00 3.62
3034 3233 0.037160 GGTGTTTTAGCGGGAGGGAA 59.963 55.000 0.00 0.00 0.00 3.97
3035 3234 1.681076 GGTGTTTTAGCGGGAGGGA 59.319 57.895 0.00 0.00 0.00 4.20
3036 3235 1.743995 CGGTGTTTTAGCGGGAGGG 60.744 63.158 0.00 0.00 45.98 4.30
3037 3236 3.884900 CGGTGTTTTAGCGGGAGG 58.115 61.111 0.00 0.00 45.98 4.30
3043 3242 3.867493 GTGTCTATACCCGGTGTTTTAGC 59.133 47.826 0.00 2.02 0.00 3.09
3044 3243 5.334724 AGTGTCTATACCCGGTGTTTTAG 57.665 43.478 0.00 3.99 0.00 1.85
3045 3244 5.743636 AAGTGTCTATACCCGGTGTTTTA 57.256 39.130 0.00 0.00 0.00 1.52
3046 3245 4.628963 AAGTGTCTATACCCGGTGTTTT 57.371 40.909 0.00 0.00 0.00 2.43
3047 3246 4.572909 GAAAGTGTCTATACCCGGTGTTT 58.427 43.478 0.00 0.00 0.00 2.83
3048 3247 3.367703 CGAAAGTGTCTATACCCGGTGTT 60.368 47.826 0.00 0.00 0.00 3.32
3049 3248 2.165030 CGAAAGTGTCTATACCCGGTGT 59.835 50.000 0.00 0.00 0.00 4.16
3050 3249 2.165030 ACGAAAGTGTCTATACCCGGTG 59.835 50.000 0.00 0.00 46.97 4.94
3051 3250 2.450476 ACGAAAGTGTCTATACCCGGT 58.550 47.619 0.00 0.00 46.97 5.28
3065 3264 4.383602 CGGTGGCCGCAACGAAAG 62.384 66.667 19.98 0.00 41.17 2.62
3075 3274 2.872858 GAGATACTTTTCATCGGTGGCC 59.127 50.000 0.00 0.00 0.00 5.36
3076 3275 3.798202 AGAGATACTTTTCATCGGTGGC 58.202 45.455 0.00 0.00 0.00 5.01
3077 3276 5.419542 TGAAGAGATACTTTTCATCGGTGG 58.580 41.667 0.00 0.00 39.13 4.61
3078 3277 7.545362 AATGAAGAGATACTTTTCATCGGTG 57.455 36.000 14.61 0.00 42.05 4.94
3079 3278 8.567285 AAAATGAAGAGATACTTTTCATCGGT 57.433 30.769 14.61 4.87 42.05 4.69
3119 3318 9.524106 GCTGATGTTGATATCAATTTCATTTCA 57.476 29.630 20.65 13.52 36.69 2.69
3120 3319 9.524106 TGCTGATGTTGATATCAATTTCATTTC 57.476 29.630 20.65 15.86 36.69 2.17
3121 3320 9.878667 TTGCTGATGTTGATATCAATTTCATTT 57.121 25.926 20.65 1.51 36.69 2.32
3122 3321 9.529325 CTTGCTGATGTTGATATCAATTTCATT 57.471 29.630 20.65 5.59 36.69 2.57
3123 3322 8.909923 TCTTGCTGATGTTGATATCAATTTCAT 58.090 29.630 20.65 18.00 36.69 2.57
3124 3323 8.186163 GTCTTGCTGATGTTGATATCAATTTCA 58.814 33.333 20.65 21.52 36.69 2.69
3125 3324 8.404000 AGTCTTGCTGATGTTGATATCAATTTC 58.596 33.333 20.65 18.68 36.69 2.17
3126 3325 8.289939 AGTCTTGCTGATGTTGATATCAATTT 57.710 30.769 20.65 11.43 36.69 1.82
3127 3326 7.876936 AGTCTTGCTGATGTTGATATCAATT 57.123 32.000 20.65 11.77 36.69 2.32
3128 3327 7.989170 TGTAGTCTTGCTGATGTTGATATCAAT 59.011 33.333 20.65 6.35 36.69 2.57
3129 3328 7.330262 TGTAGTCTTGCTGATGTTGATATCAA 58.670 34.615 14.23 14.23 36.69 2.57
3130 3329 6.877236 TGTAGTCTTGCTGATGTTGATATCA 58.123 36.000 0.00 0.00 35.83 2.15
3131 3330 7.278646 TGTTGTAGTCTTGCTGATGTTGATATC 59.721 37.037 0.00 0.00 0.00 1.63
3132 3331 7.105588 TGTTGTAGTCTTGCTGATGTTGATAT 58.894 34.615 0.00 0.00 0.00 1.63
3133 3332 6.463360 TGTTGTAGTCTTGCTGATGTTGATA 58.537 36.000 0.00 0.00 0.00 2.15
3134 3333 5.308014 TGTTGTAGTCTTGCTGATGTTGAT 58.692 37.500 0.00 0.00 0.00 2.57
3135 3334 4.702831 TGTTGTAGTCTTGCTGATGTTGA 58.297 39.130 0.00 0.00 0.00 3.18
3136 3335 5.207768 GTTGTTGTAGTCTTGCTGATGTTG 58.792 41.667 0.00 0.00 0.00 3.33
3137 3336 4.881273 TGTTGTTGTAGTCTTGCTGATGTT 59.119 37.500 0.00 0.00 0.00 2.71
3138 3337 4.273480 GTGTTGTTGTAGTCTTGCTGATGT 59.727 41.667 0.00 0.00 0.00 3.06
3139 3338 4.319766 GGTGTTGTTGTAGTCTTGCTGATG 60.320 45.833 0.00 0.00 0.00 3.07
3140 3339 3.815401 GGTGTTGTTGTAGTCTTGCTGAT 59.185 43.478 0.00 0.00 0.00 2.90
3141 3340 3.202906 GGTGTTGTTGTAGTCTTGCTGA 58.797 45.455 0.00 0.00 0.00 4.26
3142 3341 2.942376 TGGTGTTGTTGTAGTCTTGCTG 59.058 45.455 0.00 0.00 0.00 4.41
3143 3342 3.275617 TGGTGTTGTTGTAGTCTTGCT 57.724 42.857 0.00 0.00 0.00 3.91
3144 3343 4.036262 TGAATGGTGTTGTTGTAGTCTTGC 59.964 41.667 0.00 0.00 0.00 4.01
3145 3344 5.065859 TGTGAATGGTGTTGTTGTAGTCTTG 59.934 40.000 0.00 0.00 0.00 3.02
3146 3345 5.189928 TGTGAATGGTGTTGTTGTAGTCTT 58.810 37.500 0.00 0.00 0.00 3.01
3147 3346 4.776349 TGTGAATGGTGTTGTTGTAGTCT 58.224 39.130 0.00 0.00 0.00 3.24
3148 3347 5.689383 ATGTGAATGGTGTTGTTGTAGTC 57.311 39.130 0.00 0.00 0.00 2.59
3149 3348 5.592282 TGAATGTGAATGGTGTTGTTGTAGT 59.408 36.000 0.00 0.00 0.00 2.73
3150 3349 6.070897 TGAATGTGAATGGTGTTGTTGTAG 57.929 37.500 0.00 0.00 0.00 2.74
3151 3350 6.456795 TTGAATGTGAATGGTGTTGTTGTA 57.543 33.333 0.00 0.00 0.00 2.41
3152 3351 4.998671 TGAATGTGAATGGTGTTGTTGT 57.001 36.364 0.00 0.00 0.00 3.32
3153 3352 6.847956 ATTTGAATGTGAATGGTGTTGTTG 57.152 33.333 0.00 0.00 0.00 3.33
3154 3353 7.495901 TGTATTTGAATGTGAATGGTGTTGTT 58.504 30.769 0.00 0.00 0.00 2.83
3155 3354 7.048629 TGTATTTGAATGTGAATGGTGTTGT 57.951 32.000 0.00 0.00 0.00 3.32
3156 3355 7.943413 TTGTATTTGAATGTGAATGGTGTTG 57.057 32.000 0.00 0.00 0.00 3.33
3157 3356 9.206870 GAATTGTATTTGAATGTGAATGGTGTT 57.793 29.630 0.00 0.00 0.00 3.32
3158 3357 8.366401 TGAATTGTATTTGAATGTGAATGGTGT 58.634 29.630 0.00 0.00 0.00 4.16
3159 3358 8.760103 TGAATTGTATTTGAATGTGAATGGTG 57.240 30.769 0.00 0.00 0.00 4.17
3160 3359 9.775854 TTTGAATTGTATTTGAATGTGAATGGT 57.224 25.926 0.00 0.00 0.00 3.55
3182 3381 9.708092 TGCTGTCAAATATTCAATTTCATTTGA 57.292 25.926 3.57 3.57 42.24 2.69
3183 3382 9.967245 CTGCTGTCAAATATTCAATTTCATTTG 57.033 29.630 0.00 0.00 38.92 2.32
3184 3383 8.662141 GCTGCTGTCAAATATTCAATTTCATTT 58.338 29.630 0.00 0.00 0.00 2.32
3185 3384 7.820386 TGCTGCTGTCAAATATTCAATTTCATT 59.180 29.630 0.00 0.00 0.00 2.57
3186 3385 7.324935 TGCTGCTGTCAAATATTCAATTTCAT 58.675 30.769 0.00 0.00 0.00 2.57
3187 3386 6.689554 TGCTGCTGTCAAATATTCAATTTCA 58.310 32.000 0.00 0.00 0.00 2.69
3188 3387 7.116662 TGTTGCTGCTGTCAAATATTCAATTTC 59.883 33.333 0.00 0.00 0.00 2.17
3189 3388 6.930164 TGTTGCTGCTGTCAAATATTCAATTT 59.070 30.769 0.00 0.00 0.00 1.82
3190 3389 6.457355 TGTTGCTGCTGTCAAATATTCAATT 58.543 32.000 0.00 0.00 0.00 2.32
3191 3390 6.028146 TGTTGCTGCTGTCAAATATTCAAT 57.972 33.333 0.00 0.00 0.00 2.57
3192 3391 5.450592 TGTTGCTGCTGTCAAATATTCAA 57.549 34.783 0.00 0.00 0.00 2.69
3193 3392 5.221880 GTTGTTGCTGCTGTCAAATATTCA 58.778 37.500 0.00 0.00 0.00 2.57
3194 3393 4.622740 GGTTGTTGCTGCTGTCAAATATTC 59.377 41.667 0.00 0.00 0.00 1.75
3195 3394 4.039004 TGGTTGTTGCTGCTGTCAAATATT 59.961 37.500 0.00 0.00 0.00 1.28
3196 3395 3.573538 TGGTTGTTGCTGCTGTCAAATAT 59.426 39.130 0.00 0.00 0.00 1.28
3197 3396 2.954989 TGGTTGTTGCTGCTGTCAAATA 59.045 40.909 0.00 0.00 0.00 1.40
3198 3397 1.755959 TGGTTGTTGCTGCTGTCAAAT 59.244 42.857 0.00 0.00 0.00 2.32
3199 3398 1.180907 TGGTTGTTGCTGCTGTCAAA 58.819 45.000 0.00 0.00 0.00 2.69
3200 3399 1.401761 ATGGTTGTTGCTGCTGTCAA 58.598 45.000 0.00 1.12 0.00 3.18
3201 3400 1.401761 AATGGTTGTTGCTGCTGTCA 58.598 45.000 0.00 0.00 0.00 3.58
3202 3401 3.855689 ATAATGGTTGTTGCTGCTGTC 57.144 42.857 0.00 0.00 0.00 3.51
3203 3402 3.129287 GCTATAATGGTTGTTGCTGCTGT 59.871 43.478 0.00 0.00 0.00 4.40
3204 3403 3.129113 TGCTATAATGGTTGTTGCTGCTG 59.871 43.478 0.00 0.00 0.00 4.41
3205 3404 3.355378 TGCTATAATGGTTGTTGCTGCT 58.645 40.909 0.00 0.00 0.00 4.24
3206 3405 3.378112 TCTGCTATAATGGTTGTTGCTGC 59.622 43.478 0.00 0.00 0.00 5.25
3207 3406 5.297527 TGATCTGCTATAATGGTTGTTGCTG 59.702 40.000 0.00 0.00 0.00 4.41
3208 3407 5.439721 TGATCTGCTATAATGGTTGTTGCT 58.560 37.500 0.00 0.00 0.00 3.91
3209 3408 5.756195 TGATCTGCTATAATGGTTGTTGC 57.244 39.130 0.00 0.00 0.00 4.17
3210 3409 8.984891 TTTTTGATCTGCTATAATGGTTGTTG 57.015 30.769 0.00 0.00 0.00 3.33
3244 3443 9.973450 TTGCTGCTGTTGTTAAAATTTTATAGA 57.027 25.926 11.33 0.00 0.00 1.98
3246 3445 8.983724 GGTTGCTGCTGTTGTTAAAATTTTATA 58.016 29.630 11.33 1.98 0.00 0.98
3247 3446 7.497249 TGGTTGCTGCTGTTGTTAAAATTTTAT 59.503 29.630 11.33 0.00 0.00 1.40
3248 3447 6.818644 TGGTTGCTGCTGTTGTTAAAATTTTA 59.181 30.769 6.54 6.54 0.00 1.52
3249 3448 5.645497 TGGTTGCTGCTGTTGTTAAAATTTT 59.355 32.000 8.75 8.75 0.00 1.82
3250 3449 5.181748 TGGTTGCTGCTGTTGTTAAAATTT 58.818 33.333 0.00 0.00 0.00 1.82
3251 3450 4.764172 TGGTTGCTGCTGTTGTTAAAATT 58.236 34.783 0.00 0.00 0.00 1.82
3252 3451 4.399004 TGGTTGCTGCTGTTGTTAAAAT 57.601 36.364 0.00 0.00 0.00 1.82
3253 3452 3.876274 TGGTTGCTGCTGTTGTTAAAA 57.124 38.095 0.00 0.00 0.00 1.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.