Multiple sequence alignment - TraesCS3A01G467900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G467900 chr3A 100.000 3982 0 0 1 3982 700951312 700955293 0.000000e+00 7354.0
1 TraesCS3A01G467900 chr3A 84.914 928 79 22 2320 3199 700893399 700894313 0.000000e+00 881.0
2 TraesCS3A01G467900 chr3A 90.329 517 30 8 1864 2361 701123274 701123789 0.000000e+00 660.0
3 TraesCS3A01G467900 chr3A 79.761 919 121 38 2394 3289 700945395 700946271 1.220000e-169 606.0
4 TraesCS3A01G467900 chr3A 80.905 707 102 17 1938 2627 701139781 701140471 9.800000e-146 527.0
5 TraesCS3A01G467900 chr3A 80.426 751 93 31 1706 2418 700944580 700945314 1.270000e-144 523.0
6 TraesCS3A01G467900 chr3A 82.261 637 80 9 2668 3282 701140477 701141102 1.640000e-143 520.0
7 TraesCS3A01G467900 chr3A 87.692 390 16 16 844 1225 700891098 700891463 3.680000e-115 425.0
8 TraesCS3A01G467900 chr3A 84.596 396 20 19 844 1225 701122149 701122517 4.890000e-94 355.0
9 TraesCS3A01G467900 chr3A 87.372 293 21 10 853 1136 700907644 700907929 4.960000e-84 322.0
10 TraesCS3A01G467900 chr3A 88.199 161 19 0 1342 1502 700891563 700891723 4.060000e-45 193.0
11 TraesCS3A01G467900 chr3B 93.003 1758 64 26 844 2559 755604072 755605812 0.000000e+00 2510.0
12 TraesCS3A01G467900 chr3B 93.305 1389 71 15 2603 3979 755605993 755607371 0.000000e+00 2030.0
13 TraesCS3A01G467900 chr3B 92.288 1193 78 9 2549 3737 754722096 754723278 0.000000e+00 1681.0
14 TraesCS3A01G467900 chr3B 90.205 878 53 11 1703 2558 754719860 754720726 0.000000e+00 1114.0
15 TraesCS3A01G467900 chr3B 90.431 836 54 15 3152 3979 755771861 755772678 0.000000e+00 1077.0
16 TraesCS3A01G467900 chr3B 85.874 984 104 27 2682 3647 754771834 754772800 0.000000e+00 1014.0
17 TraesCS3A01G467900 chr3B 89.966 588 33 7 2525 3089 755771282 755771866 0.000000e+00 736.0
18 TraesCS3A01G467900 chr3B 84.494 761 56 27 2563 3286 755575772 755576507 0.000000e+00 695.0
19 TraesCS3A01G467900 chr3B 85.740 561 48 13 1985 2527 755575223 755575769 7.470000e-157 564.0
20 TraesCS3A01G467900 chr3B 81.442 749 78 22 1707 2418 755709766 755710490 1.250000e-154 556.0
21 TraesCS3A01G467900 chr3B 87.207 469 46 10 1938 2396 754770980 754771444 4.560000e-144 521.0
22 TraesCS3A01G467900 chr3B 81.534 639 87 21 2671 3286 756082112 756081482 7.680000e-137 497.0
23 TraesCS3A01G467900 chr3B 90.000 340 15 3 1703 2024 755770643 755770981 4.760000e-114 422.0
24 TraesCS3A01G467900 chr3B 87.200 375 26 14 853 1225 755573650 755574004 1.330000e-109 407.0
25 TraesCS3A01G467900 chr3B 79.700 601 58 24 1133 1703 754718453 754719019 3.760000e-100 375.0
26 TraesCS3A01G467900 chr3B 89.825 285 21 5 853 1136 754718152 754718429 3.780000e-95 359.0
27 TraesCS3A01G467900 chr3B 90.476 210 19 1 3176 3385 755660831 755661039 3.920000e-70 276.0
28 TraesCS3A01G467900 chr3B 85.638 188 27 0 1342 1529 755574104 755574291 8.730000e-47 198.0
29 TraesCS3A01G467900 chr3B 80.165 121 16 7 3673 3790 775440005 775439890 2.550000e-12 84.2
30 TraesCS3A01G467900 chr3D 88.485 1320 96 20 1985 3264 566423151 566421848 0.000000e+00 1544.0
31 TraesCS3A01G467900 chr3D 87.001 1354 87 34 1864 3168 566300776 566299463 0.000000e+00 1443.0
32 TraesCS3A01G467900 chr3D 91.364 880 44 12 1703 2559 566132150 566131280 0.000000e+00 1175.0
33 TraesCS3A01G467900 chr3D 89.481 770 58 16 3219 3979 566298890 566298135 0.000000e+00 952.0
34 TraesCS3A01G467900 chr3D 84.328 989 105 34 2682 3650 566392398 566391440 0.000000e+00 922.0
35 TraesCS3A01G467900 chr3D 90.880 625 41 12 3363 3981 566397976 566397362 0.000000e+00 824.0
36 TraesCS3A01G467900 chr3D 91.152 486 36 5 2596 3077 566129698 566129216 0.000000e+00 652.0
37 TraesCS3A01G467900 chr3D 78.721 907 94 46 853 1703 566138674 566137811 7.630000e-142 514.0
38 TraesCS3A01G467900 chr3D 88.204 373 15 11 853 1224 566423826 566423482 6.150000e-113 418.0
39 TraesCS3A01G467900 chr3D 88.953 344 27 6 3197 3538 566112551 566112217 7.960000e-112 414.0
40 TraesCS3A01G467900 chr3D 90.940 298 11 9 844 1136 566394940 566394654 1.740000e-103 387.0
41 TraesCS3A01G467900 chr3D 85.096 208 22 4 3078 3284 566100794 566100595 1.880000e-48 204.0
42 TraesCS3A01G467900 chr3D 86.471 170 22 1 1342 1511 566423386 566423218 6.800000e-43 185.0
43 TraesCS3A01G467900 chr3D 90.164 122 9 2 3532 3650 566112160 566112039 5.330000e-34 156.0
44 TraesCS3A01G467900 chr4D 95.113 266 11 2 1 264 58646381 58646646 6.150000e-113 418.0
45 TraesCS3A01G467900 chr4D 94.361 266 14 1 1 265 509484871 509484606 1.330000e-109 407.0
46 TraesCS3A01G467900 chr6D 93.233 266 15 3 1 264 306706072 306705808 4.830000e-104 388.0
47 TraesCS3A01G467900 chr6D 92.481 266 17 3 1 264 473081670 473081934 1.040000e-100 377.0
48 TraesCS3A01G467900 chr6D 92.135 267 19 2 1 265 3615673 3615407 3.760000e-100 375.0
49 TraesCS3A01G467900 chr2D 92.830 265 17 2 2 265 13883527 13883790 2.250000e-102 383.0
50 TraesCS3A01G467900 chr2D 84.298 121 17 2 1781 1901 584625580 584625698 2.510000e-22 117.0
51 TraesCS3A01G467900 chr2D 85.714 91 13 0 307 397 24265713 24265623 3.280000e-16 97.1
52 TraesCS3A01G467900 chr1B 92.857 266 16 3 1 264 592344748 592344484 2.250000e-102 383.0
53 TraesCS3A01G467900 chr1B 76.547 307 40 24 3648 3934 622097040 622096746 5.370000e-29 139.0
54 TraesCS3A01G467900 chr7D 92.453 265 20 0 1 265 603385942 603385678 2.900000e-101 379.0
55 TraesCS3A01G467900 chr7D 83.486 109 13 5 3663 3769 617103440 617103335 3.280000e-16 97.1
56 TraesCS3A01G467900 chr7D 80.469 128 17 6 386 511 621783058 621783179 1.520000e-14 91.6
57 TraesCS3A01G467900 chr5B 91.367 278 18 5 1 273 391640622 391640898 3.760000e-100 375.0
58 TraesCS3A01G467900 chr4B 81.544 298 25 20 944 1225 649490416 649490699 6.700000e-53 219.0
59 TraesCS3A01G467900 chr5A 80.919 283 27 17 944 1212 688242405 688242674 8.730000e-47 198.0
60 TraesCS3A01G467900 chr1A 83.333 204 30 4 310 511 481926977 481927178 6.800000e-43 185.0
61 TraesCS3A01G467900 chr4A 86.709 158 16 4 3473 3626 658223033 658223189 1.900000e-38 171.0
62 TraesCS3A01G467900 chr1D 76.316 342 53 20 3648 3979 491400045 491400368 1.480000e-34 158.0
63 TraesCS3A01G467900 chr7A 78.500 200 29 10 3673 3863 79536263 79536069 6.990000e-23 119.0
64 TraesCS3A01G467900 chr2A 82.645 121 20 1 1781 1901 718878387 718878506 5.440000e-19 106.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G467900 chr3A 700951312 700955293 3981 False 7354.000000 7354 100.000000 1 3982 1 chr3A.!!$F2 3981
1 TraesCS3A01G467900 chr3A 700944580 700946271 1691 False 564.500000 606 80.093500 1706 3289 2 chr3A.!!$F4 1583
2 TraesCS3A01G467900 chr3A 701139781 701141102 1321 False 523.500000 527 81.583000 1938 3282 2 chr3A.!!$F6 1344
3 TraesCS3A01G467900 chr3A 701122149 701123789 1640 False 507.500000 660 87.462500 844 2361 2 chr3A.!!$F5 1517
4 TraesCS3A01G467900 chr3A 700891098 700894313 3215 False 499.666667 881 86.935000 844 3199 3 chr3A.!!$F3 2355
5 TraesCS3A01G467900 chr3B 755604072 755607371 3299 False 2270.000000 2510 93.154000 844 3979 2 chr3B.!!$F6 3135
6 TraesCS3A01G467900 chr3B 754718152 754723278 5126 False 882.250000 1681 88.004500 853 3737 4 chr3B.!!$F3 2884
7 TraesCS3A01G467900 chr3B 754770980 754772800 1820 False 767.500000 1014 86.540500 1938 3647 2 chr3B.!!$F4 1709
8 TraesCS3A01G467900 chr3B 755770643 755772678 2035 False 745.000000 1077 90.132333 1703 3979 3 chr3B.!!$F7 2276
9 TraesCS3A01G467900 chr3B 755709766 755710490 724 False 556.000000 556 81.442000 1707 2418 1 chr3B.!!$F2 711
10 TraesCS3A01G467900 chr3B 756081482 756082112 630 True 497.000000 497 81.534000 2671 3286 1 chr3B.!!$R1 615
11 TraesCS3A01G467900 chr3B 755573650 755576507 2857 False 466.000000 695 85.768000 853 3286 4 chr3B.!!$F5 2433
12 TraesCS3A01G467900 chr3D 566298135 566300776 2641 True 1197.500000 1443 88.241000 1864 3979 2 chr3D.!!$R5 2115
13 TraesCS3A01G467900 chr3D 566129216 566132150 2934 True 913.500000 1175 91.258000 1703 3077 2 chr3D.!!$R4 1374
14 TraesCS3A01G467900 chr3D 566421848 566423826 1978 True 715.666667 1544 87.720000 853 3264 3 chr3D.!!$R7 2411
15 TraesCS3A01G467900 chr3D 566391440 566397976 6536 True 711.000000 922 88.716000 844 3981 3 chr3D.!!$R6 3137
16 TraesCS3A01G467900 chr3D 566137811 566138674 863 True 514.000000 514 78.721000 853 1703 1 chr3D.!!$R2 850
17 TraesCS3A01G467900 chr3D 566112039 566112551 512 True 285.000000 414 89.558500 3197 3650 2 chr3D.!!$R3 453

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
58 59 0.036732 CTTGGAGGTGCTGCTTGGTA 59.963 55.0 0.00 0.0 0.00 3.25 F
786 787 0.040958 CGTCTCACACAAAGCCAAGC 60.041 55.0 0.00 0.0 0.00 4.01 F
789 790 0.313043 CTCACACAAAGCCAAGCAGG 59.687 55.0 0.00 0.0 41.84 4.85 F
1805 6248 0.323908 TGTTTTGGGGCCGGGATTAG 60.324 55.0 2.18 0.0 0.00 1.73 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1252 3525 0.821711 CGGCCTGTGTCCTCCAAAAA 60.822 55.000 0.00 0.0 0.00 1.94 R
2087 7295 1.133823 TGCCCAAGCAGTTCTGAAGAA 60.134 47.619 3.84 0.0 46.52 2.52 R
2495 7888 2.606795 GGAGCGCTTGTGCAAACAAATA 60.607 45.455 13.26 0.0 39.64 1.40 R
3128 10200 3.274288 GCTCATAACCAACTCCCAGAAG 58.726 50.000 0.00 0.0 0.00 2.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.450115 ACTCGTCCGGGTAGCAGC 61.450 66.667 0.00 0.00 0.00 5.25
20 21 4.430765 CGTCCGGGTAGCAGCGTT 62.431 66.667 0.00 0.00 0.00 4.84
21 22 2.813908 GTCCGGGTAGCAGCGTTG 60.814 66.667 0.00 0.00 0.00 4.10
22 23 3.307906 TCCGGGTAGCAGCGTTGT 61.308 61.111 0.00 0.00 0.00 3.32
23 24 2.813908 CCGGGTAGCAGCGTTGTC 60.814 66.667 0.00 0.00 0.00 3.18
24 25 3.179265 CGGGTAGCAGCGTTGTCG 61.179 66.667 0.00 0.00 40.37 4.35
25 26 2.813908 GGGTAGCAGCGTTGTCGG 60.814 66.667 0.00 0.00 37.56 4.79
26 27 3.488090 GGTAGCAGCGTTGTCGGC 61.488 66.667 0.00 0.00 37.56 5.54
27 28 3.838795 GTAGCAGCGTTGTCGGCG 61.839 66.667 0.00 0.00 37.56 6.46
28 29 4.351938 TAGCAGCGTTGTCGGCGT 62.352 61.111 6.85 0.00 37.56 5.68
36 37 1.574428 GTTGTCGGCGTTGCATTCT 59.426 52.632 6.85 0.00 0.00 2.40
39 40 0.237235 TGTCGGCGTTGCATTCTTTC 59.763 50.000 6.85 0.00 0.00 2.62
40 41 0.517316 GTCGGCGTTGCATTCTTTCT 59.483 50.000 6.85 0.00 0.00 2.52
41 42 1.069227 GTCGGCGTTGCATTCTTTCTT 60.069 47.619 6.85 0.00 0.00 2.52
42 43 1.069296 TCGGCGTTGCATTCTTTCTTG 60.069 47.619 6.85 0.00 0.00 3.02
45 46 2.589014 GCGTTGCATTCTTTCTTGGAG 58.411 47.619 0.00 0.00 0.00 3.86
46 47 2.669391 GCGTTGCATTCTTTCTTGGAGG 60.669 50.000 0.00 0.00 0.00 4.30
47 48 2.554032 CGTTGCATTCTTTCTTGGAGGT 59.446 45.455 0.00 0.00 0.00 3.85
49 50 1.888512 TGCATTCTTTCTTGGAGGTGC 59.111 47.619 0.00 0.00 0.00 5.01
51 52 2.094854 GCATTCTTTCTTGGAGGTGCTG 60.095 50.000 0.00 0.00 0.00 4.41
52 53 1.609208 TTCTTTCTTGGAGGTGCTGC 58.391 50.000 0.00 0.00 0.00 5.25
53 54 0.767375 TCTTTCTTGGAGGTGCTGCT 59.233 50.000 0.00 0.00 0.00 4.24
54 55 1.143684 TCTTTCTTGGAGGTGCTGCTT 59.856 47.619 0.00 0.00 0.00 3.91
55 56 1.268899 CTTTCTTGGAGGTGCTGCTTG 59.731 52.381 0.00 0.00 0.00 4.01
56 57 0.538057 TTCTTGGAGGTGCTGCTTGG 60.538 55.000 0.00 0.00 0.00 3.61
57 58 1.228367 CTTGGAGGTGCTGCTTGGT 60.228 57.895 0.00 0.00 0.00 3.67
58 59 0.036732 CTTGGAGGTGCTGCTTGGTA 59.963 55.000 0.00 0.00 0.00 3.25
59 60 0.250727 TTGGAGGTGCTGCTTGGTAC 60.251 55.000 0.00 0.00 0.00 3.34
61 62 2.358737 AGGTGCTGCTTGGTACGC 60.359 61.111 0.00 0.00 0.00 4.42
62 63 3.788766 GGTGCTGCTTGGTACGCG 61.789 66.667 3.53 3.53 0.00 6.01
63 64 3.788766 GTGCTGCTTGGTACGCGG 61.789 66.667 12.47 0.00 36.84 6.46
69 70 3.484547 CTTGGTACGCGGCGGTTC 61.485 66.667 27.37 15.19 0.00 3.62
83 84 4.573162 GTTCGGAACCTCGGTCTG 57.427 61.111 9.75 0.00 0.00 3.51
85 86 0.666577 GTTCGGAACCTCGGTCTGTG 60.667 60.000 9.75 0.00 0.00 3.66
87 88 2.571216 CGGAACCTCGGTCTGTGGT 61.571 63.158 0.00 0.00 46.25 4.16
88 89 1.004918 GGAACCTCGGTCTGTGGTG 60.005 63.158 6.17 0.00 43.56 4.17
89 90 1.004918 GAACCTCGGTCTGTGGTGG 60.005 63.158 6.17 0.00 43.56 4.61
90 91 2.450479 GAACCTCGGTCTGTGGTGGG 62.450 65.000 6.17 0.00 43.56 4.61
91 92 2.923035 CCTCGGTCTGTGGTGGGT 60.923 66.667 0.00 0.00 0.00 4.51
92 93 2.516888 CCTCGGTCTGTGGTGGGTT 61.517 63.158 0.00 0.00 0.00 4.11
93 94 1.301716 CTCGGTCTGTGGTGGGTTG 60.302 63.158 0.00 0.00 0.00 3.77
94 95 2.040009 CTCGGTCTGTGGTGGGTTGT 62.040 60.000 0.00 0.00 0.00 3.32
95 96 0.759812 TCGGTCTGTGGTGGGTTGTA 60.760 55.000 0.00 0.00 0.00 2.41
97 98 1.674817 CGGTCTGTGGTGGGTTGTATC 60.675 57.143 0.00 0.00 0.00 2.24
98 99 1.339727 GGTCTGTGGTGGGTTGTATCC 60.340 57.143 0.00 0.00 0.00 2.59
100 101 0.392461 CTGTGGTGGGTTGTATCCGG 60.392 60.000 0.00 0.00 0.00 5.14
101 102 1.128809 TGTGGTGGGTTGTATCCGGT 61.129 55.000 0.00 0.00 0.00 5.28
102 103 0.392060 GTGGTGGGTTGTATCCGGTC 60.392 60.000 0.00 0.00 0.00 4.79
103 104 1.153509 GGTGGGTTGTATCCGGTCG 60.154 63.158 0.00 0.00 0.00 4.79
104 105 1.153509 GTGGGTTGTATCCGGTCGG 60.154 63.158 0.00 2.52 0.00 4.79
105 106 2.202974 GGGTTGTATCCGGTCGGC 60.203 66.667 0.00 0.00 34.68 5.54
106 107 2.584143 GGTTGTATCCGGTCGGCG 60.584 66.667 0.00 0.00 34.68 6.46
107 108 3.259751 GTTGTATCCGGTCGGCGC 61.260 66.667 0.00 0.00 34.68 6.53
108 109 4.517815 TTGTATCCGGTCGGCGCC 62.518 66.667 19.07 19.07 34.68 6.53
134 135 4.179579 GGGTCATCCGCGCTTTGC 62.180 66.667 5.56 0.00 41.47 3.68
135 136 4.179579 GGTCATCCGCGCTTTGCC 62.180 66.667 5.56 2.72 42.08 4.52
137 138 4.751093 TCATCCGCGCTTTGCCGA 62.751 61.111 5.56 0.00 42.08 5.54
138 139 4.228097 CATCCGCGCTTTGCCGAG 62.228 66.667 5.56 0.00 42.08 4.63
146 147 4.093952 CTTTGCCGAGCTGCCGTG 62.094 66.667 0.00 0.00 0.00 4.94
160 161 3.677002 CCGTGGTTGGCATTTGTTT 57.323 47.368 0.00 0.00 0.00 2.83
161 162 1.496934 CCGTGGTTGGCATTTGTTTC 58.503 50.000 0.00 0.00 0.00 2.78
162 163 1.068434 CCGTGGTTGGCATTTGTTTCT 59.932 47.619 0.00 0.00 0.00 2.52
163 164 2.482839 CCGTGGTTGGCATTTGTTTCTT 60.483 45.455 0.00 0.00 0.00 2.52
164 165 2.794350 CGTGGTTGGCATTTGTTTCTTC 59.206 45.455 0.00 0.00 0.00 2.87
166 167 4.441792 GTGGTTGGCATTTGTTTCTTCTT 58.558 39.130 0.00 0.00 0.00 2.52
168 169 4.058124 GGTTGGCATTTGTTTCTTCTTCC 58.942 43.478 0.00 0.00 0.00 3.46
169 170 4.202253 GGTTGGCATTTGTTTCTTCTTCCT 60.202 41.667 0.00 0.00 0.00 3.36
170 171 5.359756 GTTGGCATTTGTTTCTTCTTCCTT 58.640 37.500 0.00 0.00 0.00 3.36
171 172 5.612725 TGGCATTTGTTTCTTCTTCCTTT 57.387 34.783 0.00 0.00 0.00 3.11
173 174 6.048509 TGGCATTTGTTTCTTCTTCCTTTTC 58.951 36.000 0.00 0.00 0.00 2.29
175 176 6.763135 GGCATTTGTTTCTTCTTCCTTTTCTT 59.237 34.615 0.00 0.00 0.00 2.52
178 179 9.977762 CATTTGTTTCTTCTTCCTTTTCTTTTG 57.022 29.630 0.00 0.00 0.00 2.44
179 180 9.942850 ATTTGTTTCTTCTTCCTTTTCTTTTGA 57.057 25.926 0.00 0.00 0.00 2.69
180 181 9.942850 TTTGTTTCTTCTTCCTTTTCTTTTGAT 57.057 25.926 0.00 0.00 0.00 2.57
181 182 8.931385 TGTTTCTTCTTCCTTTTCTTTTGATG 57.069 30.769 0.00 0.00 0.00 3.07
182 183 8.531146 TGTTTCTTCTTCCTTTTCTTTTGATGT 58.469 29.630 0.00 0.00 0.00 3.06
184 185 7.645058 TCTTCTTCCTTTTCTTTTGATGTGT 57.355 32.000 0.00 0.00 0.00 3.72
185 186 8.066612 TCTTCTTCCTTTTCTTTTGATGTGTT 57.933 30.769 0.00 0.00 0.00 3.32
186 187 7.975616 TCTTCTTCCTTTTCTTTTGATGTGTTG 59.024 33.333 0.00 0.00 0.00 3.33
187 188 7.169158 TCTTCCTTTTCTTTTGATGTGTTGT 57.831 32.000 0.00 0.00 0.00 3.32
188 189 7.035004 TCTTCCTTTTCTTTTGATGTGTTGTG 58.965 34.615 0.00 0.00 0.00 3.33
189 190 5.108517 TCCTTTTCTTTTGATGTGTTGTGC 58.891 37.500 0.00 0.00 0.00 4.57
190 191 5.105392 TCCTTTTCTTTTGATGTGTTGTGCT 60.105 36.000 0.00 0.00 0.00 4.40
191 192 5.005971 CCTTTTCTTTTGATGTGTTGTGCTG 59.994 40.000 0.00 0.00 0.00 4.41
192 193 3.082698 TCTTTTGATGTGTTGTGCTGC 57.917 42.857 0.00 0.00 0.00 5.25
193 194 2.689471 TCTTTTGATGTGTTGTGCTGCT 59.311 40.909 0.00 0.00 0.00 4.24
194 195 2.780065 TTTGATGTGTTGTGCTGCTC 57.220 45.000 0.00 0.00 0.00 4.26
195 196 0.587768 TTGATGTGTTGTGCTGCTCG 59.412 50.000 0.00 0.00 0.00 5.03
196 197 1.154338 GATGTGTTGTGCTGCTCGC 60.154 57.895 0.00 0.00 39.77 5.03
198 199 0.320683 ATGTGTTGTGCTGCTCGCTA 60.321 50.000 0.00 0.00 40.11 4.26
201 202 0.945743 TGTTGTGCTGCTCGCTACAG 60.946 55.000 0.00 0.00 36.34 2.74
216 217 4.458951 GCTACAGCGATCTTTGTATTGG 57.541 45.455 6.63 0.00 0.00 3.16
217 218 3.248602 GCTACAGCGATCTTTGTATTGGG 59.751 47.826 6.63 0.00 0.00 4.12
218 219 3.350219 ACAGCGATCTTTGTATTGGGT 57.650 42.857 0.00 0.00 0.00 4.51
219 220 3.009723 ACAGCGATCTTTGTATTGGGTG 58.990 45.455 0.00 0.00 0.00 4.61
220 221 3.009723 CAGCGATCTTTGTATTGGGTGT 58.990 45.455 0.00 0.00 0.00 4.16
221 222 3.440173 CAGCGATCTTTGTATTGGGTGTT 59.560 43.478 0.00 0.00 0.00 3.32
222 223 3.440173 AGCGATCTTTGTATTGGGTGTTG 59.560 43.478 0.00 0.00 0.00 3.33
223 224 3.427503 GCGATCTTTGTATTGGGTGTTGG 60.428 47.826 0.00 0.00 0.00 3.77
224 225 3.756434 CGATCTTTGTATTGGGTGTTGGT 59.244 43.478 0.00 0.00 0.00 3.67
225 226 4.217550 CGATCTTTGTATTGGGTGTTGGTT 59.782 41.667 0.00 0.00 0.00 3.67
226 227 4.927978 TCTTTGTATTGGGTGTTGGTTG 57.072 40.909 0.00 0.00 0.00 3.77
228 229 2.373335 TGTATTGGGTGTTGGTTGCT 57.627 45.000 0.00 0.00 0.00 3.91
229 230 2.672098 TGTATTGGGTGTTGGTTGCTT 58.328 42.857 0.00 0.00 0.00 3.91
230 231 3.034635 TGTATTGGGTGTTGGTTGCTTT 58.965 40.909 0.00 0.00 0.00 3.51
231 232 2.618442 ATTGGGTGTTGGTTGCTTTG 57.382 45.000 0.00 0.00 0.00 2.77
233 234 0.324738 TGGGTGTTGGTTGCTTTGGA 60.325 50.000 0.00 0.00 0.00 3.53
234 235 0.827368 GGGTGTTGGTTGCTTTGGAA 59.173 50.000 0.00 0.00 0.00 3.53
237 238 3.554129 GGGTGTTGGTTGCTTTGGAATAC 60.554 47.826 0.00 0.00 0.00 1.89
248 249 0.699399 TTGGAATACAAAGCGGGGGA 59.301 50.000 0.00 0.00 35.79 4.81
249 250 0.699399 TGGAATACAAAGCGGGGGAA 59.301 50.000 0.00 0.00 0.00 3.97
250 251 1.075698 TGGAATACAAAGCGGGGGAAA 59.924 47.619 0.00 0.00 0.00 3.13
251 252 1.475280 GGAATACAAAGCGGGGGAAAC 59.525 52.381 0.00 0.00 0.00 2.78
267 268 5.362105 GGGAAACCCTTTTTGGTAAAAGT 57.638 39.130 8.92 0.00 45.69 2.66
268 269 5.120399 GGGAAACCCTTTTTGGTAAAAGTG 58.880 41.667 8.92 1.62 45.69 3.16
269 270 5.338544 GGGAAACCCTTTTTGGTAAAAGTGT 60.339 40.000 8.92 2.16 45.69 3.55
270 271 6.174760 GGAAACCCTTTTTGGTAAAAGTGTT 58.825 36.000 8.92 7.29 46.74 3.32
273 274 6.614694 ACCCTTTTTGGTAAAAGTGTTTCT 57.385 33.333 8.92 0.00 45.69 2.52
274 275 7.011499 ACCCTTTTTGGTAAAAGTGTTTCTT 57.989 32.000 8.92 0.00 45.69 2.52
275 276 7.101054 ACCCTTTTTGGTAAAAGTGTTTCTTC 58.899 34.615 8.92 0.00 45.69 2.87
276 277 7.038587 ACCCTTTTTGGTAAAAGTGTTTCTTCT 60.039 33.333 8.92 0.00 45.69 2.85
277 278 7.822334 CCCTTTTTGGTAAAAGTGTTTCTTCTT 59.178 33.333 8.92 0.00 45.69 2.52
278 279 9.214957 CCTTTTTGGTAAAAGTGTTTCTTCTTT 57.785 29.630 8.92 0.00 45.69 2.52
282 283 9.990360 TTTGGTAAAAGTGTTTCTTCTTTTTCT 57.010 25.926 7.91 0.00 41.83 2.52
283 284 9.634163 TTGGTAAAAGTGTTTCTTCTTTTTCTC 57.366 29.630 7.91 1.89 41.83 2.87
284 285 8.248253 TGGTAAAAGTGTTTCTTCTTTTTCTCC 58.752 33.333 7.91 8.87 41.83 3.71
285 286 8.467598 GGTAAAAGTGTTTCTTCTTTTTCTCCT 58.532 33.333 7.91 0.00 41.83 3.69
286 287 9.504710 GTAAAAGTGTTTCTTCTTTTTCTCCTC 57.495 33.333 7.91 0.00 41.83 3.71
287 288 7.703058 AAAGTGTTTCTTCTTTTTCTCCTCA 57.297 32.000 0.00 0.00 35.02 3.86
288 289 6.685527 AGTGTTTCTTCTTTTTCTCCTCAC 57.314 37.500 0.00 0.00 0.00 3.51
289 290 5.294552 AGTGTTTCTTCTTTTTCTCCTCACG 59.705 40.000 0.00 0.00 0.00 4.35
291 292 3.753294 TCTTCTTTTTCTCCTCACGCT 57.247 42.857 0.00 0.00 0.00 5.07
292 293 4.073293 TCTTCTTTTTCTCCTCACGCTT 57.927 40.909 0.00 0.00 0.00 4.68
293 294 4.058817 TCTTCTTTTTCTCCTCACGCTTC 58.941 43.478 0.00 0.00 0.00 3.86
297 298 3.753294 TTTTCTCCTCACGCTTCTTCT 57.247 42.857 0.00 0.00 0.00 2.85
299 300 2.208132 TCTCCTCACGCTTCTTCTCT 57.792 50.000 0.00 0.00 0.00 3.10
300 301 2.088423 TCTCCTCACGCTTCTTCTCTC 58.912 52.381 0.00 0.00 0.00 3.20
301 302 2.091541 CTCCTCACGCTTCTTCTCTCT 58.908 52.381 0.00 0.00 0.00 3.10
302 303 2.088423 TCCTCACGCTTCTTCTCTCTC 58.912 52.381 0.00 0.00 0.00 3.20
303 304 1.202132 CCTCACGCTTCTTCTCTCTCG 60.202 57.143 0.00 0.00 0.00 4.04
304 305 0.805614 TCACGCTTCTTCTCTCTCGG 59.194 55.000 0.00 0.00 0.00 4.63
305 306 0.179150 CACGCTTCTTCTCTCTCGGG 60.179 60.000 0.00 0.00 0.00 5.14
306 307 0.322636 ACGCTTCTTCTCTCTCGGGA 60.323 55.000 0.00 0.00 0.00 5.14
307 308 1.028905 CGCTTCTTCTCTCTCGGGAT 58.971 55.000 0.00 0.00 0.00 3.85
308 309 1.268999 CGCTTCTTCTCTCTCGGGATG 60.269 57.143 0.00 0.00 0.00 3.51
309 310 2.028130 GCTTCTTCTCTCTCGGGATGA 58.972 52.381 0.00 0.00 0.00 2.92
310 311 2.428890 GCTTCTTCTCTCTCGGGATGAA 59.571 50.000 0.00 0.00 0.00 2.57
311 312 3.736740 GCTTCTTCTCTCTCGGGATGAAC 60.737 52.174 0.00 0.00 0.00 3.18
312 313 3.374042 TCTTCTCTCTCGGGATGAACT 57.626 47.619 0.00 0.00 0.00 3.01
313 314 3.020274 TCTTCTCTCTCGGGATGAACTG 58.980 50.000 0.00 0.00 0.00 3.16
315 316 3.087370 TCTCTCTCGGGATGAACTGAA 57.913 47.619 0.00 0.00 0.00 3.02
318 319 3.165875 TCTCTCGGGATGAACTGAAACT 58.834 45.455 0.00 0.00 0.00 2.66
319 320 3.193691 TCTCTCGGGATGAACTGAAACTC 59.806 47.826 0.00 0.00 0.00 3.01
320 321 2.233922 TCTCGGGATGAACTGAAACTCC 59.766 50.000 0.00 0.00 0.00 3.85
321 322 1.067142 TCGGGATGAACTGAAACTCCG 60.067 52.381 0.00 0.00 37.82 4.63
322 323 1.739067 GGGATGAACTGAAACTCCGG 58.261 55.000 0.00 0.00 0.00 5.14
323 324 1.087501 GGATGAACTGAAACTCCGGC 58.912 55.000 0.00 0.00 0.00 6.13
326 327 0.250295 TGAACTGAAACTCCGGCCAG 60.250 55.000 2.24 0.00 0.00 4.85
327 328 1.578206 GAACTGAAACTCCGGCCAGC 61.578 60.000 2.24 0.00 0.00 4.85
328 329 2.747855 CTGAAACTCCGGCCAGCC 60.748 66.667 2.24 0.00 0.00 4.85
329 330 3.551496 CTGAAACTCCGGCCAGCCA 62.551 63.158 9.78 0.00 35.37 4.75
330 331 2.747855 GAAACTCCGGCCAGCCAG 60.748 66.667 9.78 1.81 35.37 4.85
331 332 3.249189 AAACTCCGGCCAGCCAGA 61.249 61.111 9.78 1.43 35.37 3.86
332 333 2.748058 GAAACTCCGGCCAGCCAGAA 62.748 60.000 9.78 0.00 35.37 3.02
333 334 3.553095 AACTCCGGCCAGCCAGAAC 62.553 63.158 9.78 0.00 35.37 3.01
380 381 4.874977 GCGACGCTCCAGCCTACC 62.875 72.222 13.73 0.00 37.91 3.18
381 382 4.554363 CGACGCTCCAGCCTACCG 62.554 72.222 0.00 0.00 37.91 4.02
382 383 3.450115 GACGCTCCAGCCTACCGT 61.450 66.667 0.00 0.00 37.91 4.83
383 384 3.701604 GACGCTCCAGCCTACCGTG 62.702 68.421 0.00 0.00 37.91 4.94
385 386 2.125512 GCTCCAGCCTACCGTGTG 60.126 66.667 0.00 0.00 34.31 3.82
386 387 2.125512 CTCCAGCCTACCGTGTGC 60.126 66.667 0.00 0.00 0.00 4.57
387 388 2.603473 TCCAGCCTACCGTGTGCT 60.603 61.111 0.00 0.00 35.25 4.40
388 389 2.125512 CCAGCCTACCGTGTGCTC 60.126 66.667 0.00 0.00 31.77 4.26
389 390 2.125512 CAGCCTACCGTGTGCTCC 60.126 66.667 0.00 0.00 31.77 4.70
390 391 3.760035 AGCCTACCGTGTGCTCCG 61.760 66.667 0.00 0.00 0.00 4.63
403 404 4.537433 CTCCGGCCAGCTGCTACC 62.537 72.222 8.66 8.41 40.92 3.18
415 416 4.273257 GCTACCGAGCTCCTCCGC 62.273 72.222 8.47 2.48 45.98 5.54
416 417 3.597728 CTACCGAGCTCCTCCGCC 61.598 72.222 8.47 0.00 0.00 6.13
421 422 4.219999 GAGCTCCTCCGCCTGCTC 62.220 72.222 0.87 0.00 43.75 4.26
475 476 2.127156 GCGTTGGCCGGTTTTACG 60.127 61.111 1.90 9.64 36.94 3.18
484 485 3.146783 CGGTTTTACGGGATGCTCA 57.853 52.632 0.00 0.00 0.00 4.26
485 486 1.444836 CGGTTTTACGGGATGCTCAA 58.555 50.000 0.00 0.00 0.00 3.02
508 509 6.966534 AAAAATGGCTCGAATCCTTCATAT 57.033 33.333 5.16 0.00 0.00 1.78
510 511 8.641498 AAAAATGGCTCGAATCCTTCATATAT 57.359 30.769 5.16 0.00 0.00 0.86
511 512 9.739276 AAAAATGGCTCGAATCCTTCATATATA 57.261 29.630 5.16 0.00 0.00 0.86
560 561 8.932434 ATATATATATGAGACGGATGAGTGCT 57.068 34.615 4.37 0.00 0.00 4.40
561 562 3.932545 ATATGAGACGGATGAGTGCTC 57.067 47.619 0.00 0.00 0.00 4.26
562 563 1.774110 ATGAGACGGATGAGTGCTCT 58.226 50.000 0.68 0.00 0.00 4.09
563 564 2.420058 TGAGACGGATGAGTGCTCTA 57.580 50.000 0.68 0.00 0.00 2.43
565 566 3.291584 TGAGACGGATGAGTGCTCTAAT 58.708 45.455 0.68 0.00 0.00 1.73
567 568 4.276183 TGAGACGGATGAGTGCTCTAATAC 59.724 45.833 0.68 0.00 0.00 1.89
569 570 4.036971 AGACGGATGAGTGCTCTAATACAC 59.963 45.833 0.00 0.00 37.05 2.90
570 571 3.243101 ACGGATGAGTGCTCTAATACACG 60.243 47.826 0.00 0.76 41.72 4.49
571 572 3.003378 CGGATGAGTGCTCTAATACACGA 59.997 47.826 0.00 0.00 41.72 4.35
572 573 4.497507 CGGATGAGTGCTCTAATACACGAA 60.498 45.833 0.00 0.00 41.72 3.85
573 574 5.348986 GGATGAGTGCTCTAATACACGAAA 58.651 41.667 0.00 0.00 41.72 3.46
574 575 5.232414 GGATGAGTGCTCTAATACACGAAAC 59.768 44.000 0.00 0.00 41.72 2.78
575 576 5.386958 TGAGTGCTCTAATACACGAAACT 57.613 39.130 0.00 0.00 41.72 2.66
576 577 5.779922 TGAGTGCTCTAATACACGAAACTT 58.220 37.500 0.00 0.00 41.72 2.66
578 579 6.805271 TGAGTGCTCTAATACACGAAACTTAC 59.195 38.462 0.00 0.00 41.72 2.34
579 580 6.684686 AGTGCTCTAATACACGAAACTTACA 58.315 36.000 0.00 0.00 41.72 2.41
580 581 6.807230 AGTGCTCTAATACACGAAACTTACAG 59.193 38.462 0.00 0.00 41.72 2.74
581 582 6.034683 GTGCTCTAATACACGAAACTTACAGG 59.965 42.308 0.00 0.00 0.00 4.00
583 584 6.979238 GCTCTAATACACGAAACTTACAGGAT 59.021 38.462 0.00 0.00 0.00 3.24
586 587 9.961265 TCTAATACACGAAACTTACAGGATATG 57.039 33.333 0.00 0.00 0.00 1.78
587 588 9.745880 CTAATACACGAAACTTACAGGATATGT 57.254 33.333 0.00 0.00 46.45 2.29
590 591 9.745880 ATACACGAAACTTACAGGATATGTTAG 57.254 33.333 0.00 0.00 39.96 2.34
629 630 6.887626 TGATGTTCCTTTTTAACCTGTACC 57.112 37.500 0.00 0.00 0.00 3.34
630 631 6.366340 TGATGTTCCTTTTTAACCTGTACCA 58.634 36.000 0.00 0.00 0.00 3.25
631 632 7.007723 TGATGTTCCTTTTTAACCTGTACCAT 58.992 34.615 0.00 0.00 0.00 3.55
632 633 8.164733 TGATGTTCCTTTTTAACCTGTACCATA 58.835 33.333 0.00 0.00 0.00 2.74
634 635 8.763984 TGTTCCTTTTTAACCTGTACCATAAA 57.236 30.769 0.00 0.00 0.00 1.40
635 636 9.369672 TGTTCCTTTTTAACCTGTACCATAAAT 57.630 29.630 0.00 0.00 0.00 1.40
638 639 9.238368 TCCTTTTTAACCTGTACCATAAATCTG 57.762 33.333 0.00 0.00 0.00 2.90
639 640 9.238368 CCTTTTTAACCTGTACCATAAATCTGA 57.762 33.333 0.00 0.00 0.00 3.27
658 659 8.970691 AATCTGAAGATTTGACCGTTTTTATG 57.029 30.769 0.00 0.00 41.64 1.90
659 660 6.908825 TCTGAAGATTTGACCGTTTTTATGG 58.091 36.000 0.00 0.00 0.00 2.74
661 662 5.536916 TGAAGATTTGACCGTTTTTATGGGT 59.463 36.000 0.00 0.00 36.58 4.51
662 663 6.041069 TGAAGATTTGACCGTTTTTATGGGTT 59.959 34.615 0.00 0.00 33.28 4.11
664 665 6.822442 AGATTTGACCGTTTTTATGGGTTTT 58.178 32.000 0.00 0.00 33.28 2.43
666 667 8.422566 AGATTTGACCGTTTTTATGGGTTTTTA 58.577 29.630 0.00 0.00 33.28 1.52
672 673 7.681679 ACCGTTTTTATGGGTTTTTATGGAAT 58.318 30.769 0.00 0.00 0.00 3.01
673 674 7.820386 ACCGTTTTTATGGGTTTTTATGGAATC 59.180 33.333 0.00 0.00 0.00 2.52
674 675 8.038351 CCGTTTTTATGGGTTTTTATGGAATCT 58.962 33.333 0.00 0.00 0.00 2.40
680 681 9.983024 TTATGGGTTTTTATGGAATCTGTTAGA 57.017 29.630 0.00 0.00 0.00 2.10
681 682 7.938140 TGGGTTTTTATGGAATCTGTTAGAG 57.062 36.000 0.00 0.00 0.00 2.43
683 684 8.336235 TGGGTTTTTATGGAATCTGTTAGAGAT 58.664 33.333 0.00 0.00 43.91 2.75
692 693 5.590530 AATCTGTTAGAGATTCTCAGCGT 57.409 39.130 15.83 0.00 46.84 5.07
693 694 5.590530 ATCTGTTAGAGATTCTCAGCGTT 57.409 39.130 15.83 0.00 38.35 4.84
694 695 4.987832 TCTGTTAGAGATTCTCAGCGTTC 58.012 43.478 15.83 1.57 32.06 3.95
695 696 4.109050 CTGTTAGAGATTCTCAGCGTTCC 58.891 47.826 15.83 0.00 32.06 3.62
696 697 3.509967 TGTTAGAGATTCTCAGCGTTCCA 59.490 43.478 15.83 0.44 32.06 3.53
697 698 4.160439 TGTTAGAGATTCTCAGCGTTCCAT 59.840 41.667 15.83 0.00 32.06 3.41
698 699 3.451141 AGAGATTCTCAGCGTTCCATC 57.549 47.619 15.83 0.00 32.06 3.51
699 700 3.030291 AGAGATTCTCAGCGTTCCATCT 58.970 45.455 15.83 0.00 32.06 2.90
701 702 1.596727 GATTCTCAGCGTTCCATCTGC 59.403 52.381 0.00 0.00 0.00 4.26
702 703 0.321346 TTCTCAGCGTTCCATCTGCA 59.679 50.000 0.00 0.00 0.00 4.41
704 705 1.065926 TCTCAGCGTTCCATCTGCATT 60.066 47.619 0.00 0.00 0.00 3.56
706 707 1.739466 TCAGCGTTCCATCTGCATTTC 59.261 47.619 0.00 0.00 0.00 2.17
707 708 0.729116 AGCGTTCCATCTGCATTTCG 59.271 50.000 0.00 0.00 0.00 3.46
708 709 0.863119 GCGTTCCATCTGCATTTCGC 60.863 55.000 0.00 0.00 42.89 4.70
709 710 0.729116 CGTTCCATCTGCATTTCGCT 59.271 50.000 0.00 0.00 43.06 4.93
710 711 1.267732 CGTTCCATCTGCATTTCGCTC 60.268 52.381 0.00 0.00 43.06 5.03
711 712 2.012673 GTTCCATCTGCATTTCGCTCT 58.987 47.619 0.00 0.00 43.06 4.09
712 713 1.660167 TCCATCTGCATTTCGCTCTG 58.340 50.000 0.00 0.00 43.06 3.35
713 714 1.065926 TCCATCTGCATTTCGCTCTGT 60.066 47.619 0.00 0.00 43.06 3.41
714 715 2.168313 TCCATCTGCATTTCGCTCTGTA 59.832 45.455 0.00 0.00 43.06 2.74
716 717 3.059120 CCATCTGCATTTCGCTCTGTATG 60.059 47.826 0.00 0.00 43.06 2.39
717 718 3.251479 TCTGCATTTCGCTCTGTATGT 57.749 42.857 0.00 0.00 43.06 2.29
720 721 3.333804 TGCATTTCGCTCTGTATGTCAA 58.666 40.909 0.00 0.00 43.06 3.18
721 722 3.750652 TGCATTTCGCTCTGTATGTCAAA 59.249 39.130 0.00 0.00 43.06 2.69
722 723 4.215185 TGCATTTCGCTCTGTATGTCAAAA 59.785 37.500 0.00 0.00 43.06 2.44
723 724 5.153513 GCATTTCGCTCTGTATGTCAAAAA 58.846 37.500 0.00 0.00 37.77 1.94
724 725 5.059710 GCATTTCGCTCTGTATGTCAAAAAC 59.940 40.000 0.00 0.00 37.77 2.43
725 726 4.742438 TTCGCTCTGTATGTCAAAAACC 57.258 40.909 0.00 0.00 0.00 3.27
726 727 3.734463 TCGCTCTGTATGTCAAAAACCA 58.266 40.909 0.00 0.00 0.00 3.67
727 728 3.496884 TCGCTCTGTATGTCAAAAACCAC 59.503 43.478 0.00 0.00 0.00 4.16
728 729 3.664276 CGCTCTGTATGTCAAAAACCACG 60.664 47.826 0.00 0.00 0.00 4.94
730 731 4.377431 GCTCTGTATGTCAAAAACCACGAG 60.377 45.833 0.00 0.00 0.00 4.18
731 732 4.062293 TCTGTATGTCAAAAACCACGAGG 58.938 43.478 0.00 0.00 42.21 4.63
732 733 2.550606 TGTATGTCAAAAACCACGAGGC 59.449 45.455 0.00 0.00 39.06 4.70
733 734 0.591170 ATGTCAAAAACCACGAGGCG 59.409 50.000 0.00 0.00 39.06 5.52
734 735 1.281656 GTCAAAAACCACGAGGCGG 59.718 57.895 0.00 0.00 39.06 6.13
735 736 1.894756 TCAAAAACCACGAGGCGGG 60.895 57.895 0.00 0.00 39.06 6.13
736 737 3.292159 AAAAACCACGAGGCGGGC 61.292 61.111 0.00 0.00 39.06 6.13
737 738 4.572571 AAAACCACGAGGCGGGCA 62.573 61.111 3.78 0.00 39.06 5.36
744 745 4.208686 CGAGGCGGGCAGAGGTAC 62.209 72.222 3.78 0.00 0.00 3.34
756 757 2.440980 AGGTACTCCGTACGCCCC 60.441 66.667 10.49 4.36 39.64 5.80
757 758 2.755469 GGTACTCCGTACGCCCCA 60.755 66.667 10.49 0.00 39.64 4.96
758 759 2.491621 GTACTCCGTACGCCCCAC 59.508 66.667 10.49 1.10 29.20 4.61
759 760 2.755469 TACTCCGTACGCCCCACC 60.755 66.667 10.49 0.00 0.00 4.61
765 766 4.185286 GTACGCCCCACCCCCATC 62.185 72.222 0.00 0.00 0.00 3.51
766 767 4.424867 TACGCCCCACCCCCATCT 62.425 66.667 0.00 0.00 0.00 2.90
770 771 3.480133 CCCCACCCCCATCTCGTC 61.480 72.222 0.00 0.00 0.00 4.20
771 772 2.365635 CCCACCCCCATCTCGTCT 60.366 66.667 0.00 0.00 0.00 4.18
772 773 2.435693 CCCACCCCCATCTCGTCTC 61.436 68.421 0.00 0.00 0.00 3.36
774 775 1.517832 CACCCCCATCTCGTCTCAC 59.482 63.158 0.00 0.00 0.00 3.51
776 777 1.258445 ACCCCCATCTCGTCTCACAC 61.258 60.000 0.00 0.00 0.00 3.82
777 778 1.257750 CCCCCATCTCGTCTCACACA 61.258 60.000 0.00 0.00 0.00 3.72
778 779 0.608130 CCCCATCTCGTCTCACACAA 59.392 55.000 0.00 0.00 0.00 3.33
779 780 1.001974 CCCCATCTCGTCTCACACAAA 59.998 52.381 0.00 0.00 0.00 2.83
780 781 2.341257 CCCATCTCGTCTCACACAAAG 58.659 52.381 0.00 0.00 0.00 2.77
781 782 1.728971 CCATCTCGTCTCACACAAAGC 59.271 52.381 0.00 0.00 0.00 3.51
782 783 1.728971 CATCTCGTCTCACACAAAGCC 59.271 52.381 0.00 0.00 0.00 4.35
784 785 1.138069 TCTCGTCTCACACAAAGCCAA 59.862 47.619 0.00 0.00 0.00 4.52
785 786 1.528586 CTCGTCTCACACAAAGCCAAG 59.471 52.381 0.00 0.00 0.00 3.61
786 787 0.040958 CGTCTCACACAAAGCCAAGC 60.041 55.000 0.00 0.00 0.00 4.01
788 789 1.002033 GTCTCACACAAAGCCAAGCAG 60.002 52.381 0.00 0.00 0.00 4.24
789 790 0.313043 CTCACACAAAGCCAAGCAGG 59.687 55.000 0.00 0.00 41.84 4.85
798 799 2.913578 CCAAGCAGGCAAGCACCA 60.914 61.111 4.78 0.00 36.85 4.17
799 800 2.337532 CAAGCAGGCAAGCACCAC 59.662 61.111 4.78 0.00 36.85 4.16
800 801 2.914097 AAGCAGGCAAGCACCACC 60.914 61.111 4.78 0.00 36.85 4.61
801 802 3.441712 AAGCAGGCAAGCACCACCT 62.442 57.895 4.78 0.00 36.85 4.00
802 803 2.914097 GCAGGCAAGCACCACCTT 60.914 61.111 0.00 0.00 0.00 3.50
803 804 2.501602 GCAGGCAAGCACCACCTTT 61.502 57.895 0.00 0.00 0.00 3.11
804 805 1.662044 CAGGCAAGCACCACCTTTC 59.338 57.895 0.00 0.00 0.00 2.62
806 807 0.538287 AGGCAAGCACCACCTTTCTC 60.538 55.000 0.00 0.00 0.00 2.87
808 809 1.251251 GCAAGCACCACCTTTCTCAT 58.749 50.000 0.00 0.00 0.00 2.90
809 810 1.200948 GCAAGCACCACCTTTCTCATC 59.799 52.381 0.00 0.00 0.00 2.92
810 811 2.787994 CAAGCACCACCTTTCTCATCT 58.212 47.619 0.00 0.00 0.00 2.90
811 812 2.746362 CAAGCACCACCTTTCTCATCTC 59.254 50.000 0.00 0.00 0.00 2.75
812 813 1.066573 AGCACCACCTTTCTCATCTCG 60.067 52.381 0.00 0.00 0.00 4.04
814 815 2.611518 CACCACCTTTCTCATCTCGTC 58.388 52.381 0.00 0.00 0.00 4.20
816 817 2.494073 ACCACCTTTCTCATCTCGTCTC 59.506 50.000 0.00 0.00 0.00 3.36
817 818 2.493675 CCACCTTTCTCATCTCGTCTCA 59.506 50.000 0.00 0.00 0.00 3.27
818 819 3.131933 CCACCTTTCTCATCTCGTCTCAT 59.868 47.826 0.00 0.00 0.00 2.90
819 820 4.358851 CACCTTTCTCATCTCGTCTCATC 58.641 47.826 0.00 0.00 0.00 2.92
820 821 4.097741 CACCTTTCTCATCTCGTCTCATCT 59.902 45.833 0.00 0.00 0.00 2.90
821 822 4.097741 ACCTTTCTCATCTCGTCTCATCTG 59.902 45.833 0.00 0.00 0.00 2.90
823 824 4.891627 TTCTCATCTCGTCTCATCTGAC 57.108 45.455 0.00 0.00 0.00 3.51
825 826 4.126437 TCTCATCTCGTCTCATCTGACTC 58.874 47.826 0.00 0.00 35.00 3.36
827 828 3.625313 TCATCTCGTCTCATCTGACTCAC 59.375 47.826 0.00 0.00 35.00 3.51
829 830 2.744741 TCTCGTCTCATCTGACTCACAC 59.255 50.000 0.00 0.00 35.00 3.82
832 833 2.415224 CGTCTCATCTGACTCACACAGG 60.415 54.545 0.00 0.00 36.22 4.00
833 834 1.547820 TCTCATCTGACTCACACAGGC 59.452 52.381 0.00 0.00 36.22 4.85
836 837 1.059098 ATCTGACTCACACAGGCCAA 58.941 50.000 5.01 0.00 36.22 4.52
838 839 1.227943 TGACTCACACAGGCCAAGC 60.228 57.895 5.01 0.00 0.00 4.01
839 840 2.281070 ACTCACACAGGCCAAGCG 60.281 61.111 5.01 0.00 0.00 4.68
840 841 3.730761 CTCACACAGGCCAAGCGC 61.731 66.667 5.01 0.00 0.00 5.92
842 843 2.358615 CACACAGGCCAAGCGCTA 60.359 61.111 12.05 0.00 37.74 4.26
843 844 1.746615 CACACAGGCCAAGCGCTAT 60.747 57.895 12.05 0.00 37.74 2.97
844 845 1.450312 ACACAGGCCAAGCGCTATC 60.450 57.895 12.05 2.10 37.74 2.08
845 846 2.182842 CACAGGCCAAGCGCTATCC 61.183 63.158 12.05 12.59 37.74 2.59
846 847 2.370445 ACAGGCCAAGCGCTATCCT 61.370 57.895 12.05 14.91 37.74 3.24
847 848 1.890979 CAGGCCAAGCGCTATCCTG 60.891 63.158 27.10 27.10 38.41 3.86
873 3067 2.092429 TCATAGCCATCACCTTTCCCAC 60.092 50.000 0.00 0.00 0.00 4.61
874 3068 0.623723 TAGCCATCACCTTTCCCACC 59.376 55.000 0.00 0.00 0.00 4.61
875 3069 1.682344 GCCATCACCTTTCCCACCC 60.682 63.158 0.00 0.00 0.00 4.61
876 3070 1.000359 CCATCACCTTTCCCACCCC 60.000 63.158 0.00 0.00 0.00 4.95
907 3106 0.518636 CTAAGCGCACACACAGCAAT 59.481 50.000 11.47 0.00 0.00 3.56
983 3189 1.153409 CTCTCCGCAGCAAGCAGAT 60.153 57.895 0.00 0.00 46.13 2.90
1172 3410 5.220931 CCGCAAATCCTATTTCTCTTCCTTG 60.221 44.000 0.00 0.00 0.00 3.61
1175 3413 3.933861 TCCTATTTCTCTTCCTTGCCC 57.066 47.619 0.00 0.00 0.00 5.36
1177 3415 3.788142 TCCTATTTCTCTTCCTTGCCCAT 59.212 43.478 0.00 0.00 0.00 4.00
1178 3416 3.887716 CCTATTTCTCTTCCTTGCCCATG 59.112 47.826 0.00 0.00 0.00 3.66
1179 3417 2.978156 TTTCTCTTCCTTGCCCATGT 57.022 45.000 0.00 0.00 0.00 3.21
1180 3418 4.591321 ATTTCTCTTCCTTGCCCATGTA 57.409 40.909 0.00 0.00 0.00 2.29
1252 3525 1.792949 GTCTGTTGCGTTCGATCTGTT 59.207 47.619 0.00 0.00 0.00 3.16
1253 3526 2.221055 GTCTGTTGCGTTCGATCTGTTT 59.779 45.455 0.00 0.00 0.00 2.83
1303 3815 7.510407 AGCCCTAAGTTTCTAGGCTTATTAAG 58.490 38.462 0.00 0.00 37.69 1.85
1430 3958 4.141367 TGGAGTGAAAACCTGGTCATTACA 60.141 41.667 0.00 0.00 0.00 2.41
1445 3973 7.367285 TGGTCATTACACTTTTATCTGCAAAC 58.633 34.615 0.00 0.00 0.00 2.93
1590 4137 0.974383 CTCAACTACGGGGACAACCT 59.026 55.000 0.00 0.00 40.03 3.50
1640 4187 3.422343 CGTCGTGTTCTTTTCTGATCTGC 60.422 47.826 0.00 0.00 0.00 4.26
1650 4198 4.510038 TTTCTGATCTGCAAAGGAAAGC 57.490 40.909 0.00 0.00 0.00 3.51
1669 4217 6.347644 GGAAAGCAACAAAAACCTTATGATGC 60.348 38.462 0.00 0.00 41.48 3.91
1678 4226 2.722094 ACCTTATGATGCGCTTGGAAA 58.278 42.857 9.73 0.00 0.00 3.13
1697 4245 7.308450 TGGAAATTGGAACCATTTCATACAA 57.692 32.000 19.54 0.00 36.36 2.41
1735 6178 9.620259 AATTAATCTGTCCCTAGAATGTTTCTC 57.380 33.333 0.00 0.00 41.14 2.87
1805 6248 0.323908 TGTTTTGGGGCCGGGATTAG 60.324 55.000 2.18 0.00 0.00 1.73
2087 7295 9.453572 TGCATAAAGTCTTCAATTCTTGACTAT 57.546 29.630 0.00 0.00 39.87 2.12
2190 7404 5.767816 TCAGCTACATGAATCTAGCGTTA 57.232 39.130 0.00 0.00 40.37 3.18
2270 7484 5.714806 GGAATAAAAAGGATCTTCACACCCA 59.285 40.000 0.00 0.00 0.00 4.51
2345 7586 6.381133 TGTCTCTTCTATTGTCCATGAGCTAA 59.619 38.462 0.00 0.00 0.00 3.09
2348 7589 7.780271 TCTCTTCTATTGTCCATGAGCTAAGTA 59.220 37.037 0.00 0.00 0.00 2.24
2422 7776 7.197703 TCATTGGTTCTTACGAAAAAGGAAAC 58.802 34.615 0.00 0.00 0.00 2.78
2423 7777 6.512342 TTGGTTCTTACGAAAAAGGAAACA 57.488 33.333 0.00 0.00 0.00 2.83
2495 7888 3.392947 GCCTCCCTCTAAGCCTTAAAGAT 59.607 47.826 0.00 0.00 0.00 2.40
2736 9762 6.205658 AGTTCTTGGAATCTTGAACTAGCAAC 59.794 38.462 11.73 0.00 44.70 4.17
2868 9900 0.740868 GCACTTCTGCGAGGCATACA 60.741 55.000 0.00 0.00 38.13 2.29
3034 10072 4.763073 TCATGCTAATTGTCAGTCAGGAG 58.237 43.478 0.00 0.00 0.00 3.69
3128 10200 7.761704 TGTCTGTTTGATAGTAGCTCATCTTTC 59.238 37.037 0.00 0.00 0.00 2.62
3259 10853 2.817844 ACCCGAAAAATGCTCTGGTTAC 59.182 45.455 0.00 0.00 26.84 2.50
3349 10952 2.227388 CAGTTTAGTCTTTGCCCTGCTG 59.773 50.000 0.00 0.00 0.00 4.41
3503 11110 3.954258 GCATAAAGGTATTCAAGGCCTGT 59.046 43.478 5.69 0.00 32.16 4.00
3529 11136 8.556213 ACAATCTTAAACTGATAAAGGCGTAA 57.444 30.769 0.00 0.00 0.00 3.18
3655 11332 2.356382 TGGTCCAGCAAACGTTAACAAG 59.644 45.455 0.00 0.00 0.00 3.16
3656 11333 2.287368 GGTCCAGCAAACGTTAACAAGG 60.287 50.000 0.00 3.63 0.00 3.61
3904 11589 6.968131 AAAAAGTTCAAAAAGGAGAGTTGC 57.032 33.333 0.00 0.00 0.00 4.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.450115 GCTGCTACCCGGACGAGT 61.450 66.667 0.73 0.00 0.00 4.18
8 9 2.813908 CCGACAACGCTGCTACCC 60.814 66.667 0.00 0.00 38.29 3.69
10 11 3.838795 CGCCGACAACGCTGCTAC 61.839 66.667 0.00 0.00 38.29 3.58
11 12 3.851845 AACGCCGACAACGCTGCTA 62.852 57.895 0.00 0.00 38.29 3.49
17 18 1.792057 GAATGCAACGCCGACAACG 60.792 57.895 0.00 0.00 39.43 4.10
19 20 0.665835 AAAGAATGCAACGCCGACAA 59.334 45.000 0.00 0.00 0.00 3.18
20 21 0.237235 GAAAGAATGCAACGCCGACA 59.763 50.000 0.00 0.00 0.00 4.35
21 22 0.517316 AGAAAGAATGCAACGCCGAC 59.483 50.000 0.00 0.00 0.00 4.79
22 23 1.069296 CAAGAAAGAATGCAACGCCGA 60.069 47.619 0.00 0.00 0.00 5.54
23 24 1.330306 CAAGAAAGAATGCAACGCCG 58.670 50.000 0.00 0.00 0.00 6.46
24 25 1.269448 TCCAAGAAAGAATGCAACGCC 59.731 47.619 0.00 0.00 0.00 5.68
25 26 2.589014 CTCCAAGAAAGAATGCAACGC 58.411 47.619 0.00 0.00 0.00 4.84
26 27 2.554032 ACCTCCAAGAAAGAATGCAACG 59.446 45.455 0.00 0.00 0.00 4.10
27 28 3.858503 GCACCTCCAAGAAAGAATGCAAC 60.859 47.826 0.00 0.00 0.00 4.17
28 29 2.297033 GCACCTCCAAGAAAGAATGCAA 59.703 45.455 0.00 0.00 0.00 4.08
30 31 2.094854 CAGCACCTCCAAGAAAGAATGC 60.095 50.000 0.00 0.00 0.00 3.56
31 32 2.094854 GCAGCACCTCCAAGAAAGAATG 60.095 50.000 0.00 0.00 0.00 2.67
36 37 1.321474 CAAGCAGCACCTCCAAGAAA 58.679 50.000 0.00 0.00 0.00 2.52
39 40 0.036732 TACCAAGCAGCACCTCCAAG 59.963 55.000 0.00 0.00 0.00 3.61
40 41 0.250727 GTACCAAGCAGCACCTCCAA 60.251 55.000 0.00 0.00 0.00 3.53
41 42 1.374947 GTACCAAGCAGCACCTCCA 59.625 57.895 0.00 0.00 0.00 3.86
42 43 1.741770 CGTACCAAGCAGCACCTCC 60.742 63.158 0.00 0.00 0.00 4.30
45 46 3.788766 CGCGTACCAAGCAGCACC 61.789 66.667 0.00 0.00 34.19 5.01
46 47 3.788766 CCGCGTACCAAGCAGCAC 61.789 66.667 4.92 0.00 34.19 4.40
52 53 3.484547 GAACCGCCGCGTACCAAG 61.485 66.667 12.58 0.00 0.00 3.61
66 67 0.666577 CACAGACCGAGGTTCCGAAC 60.667 60.000 2.37 2.37 0.00 3.95
67 68 1.663739 CACAGACCGAGGTTCCGAA 59.336 57.895 0.00 0.00 0.00 4.30
68 69 2.273179 CCACAGACCGAGGTTCCGA 61.273 63.158 0.00 0.00 0.00 4.55
69 70 2.261671 CCACAGACCGAGGTTCCG 59.738 66.667 0.00 0.00 0.00 4.30
71 72 1.004918 CCACCACAGACCGAGGTTC 60.005 63.158 0.00 0.00 36.27 3.62
73 74 2.923035 CCCACCACAGACCGAGGT 60.923 66.667 0.00 0.00 39.49 3.85
76 77 0.759812 TACAACCCACCACAGACCGA 60.760 55.000 0.00 0.00 0.00 4.69
77 78 0.323629 ATACAACCCACCACAGACCG 59.676 55.000 0.00 0.00 0.00 4.79
78 79 1.339727 GGATACAACCCACCACAGACC 60.340 57.143 0.00 0.00 0.00 3.85
79 80 1.674817 CGGATACAACCCACCACAGAC 60.675 57.143 0.00 0.00 0.00 3.51
80 81 0.611200 CGGATACAACCCACCACAGA 59.389 55.000 0.00 0.00 0.00 3.41
81 82 0.392461 CCGGATACAACCCACCACAG 60.392 60.000 0.00 0.00 0.00 3.66
82 83 1.128809 ACCGGATACAACCCACCACA 61.129 55.000 9.46 0.00 0.00 4.17
83 84 0.392060 GACCGGATACAACCCACCAC 60.392 60.000 9.46 0.00 0.00 4.16
85 86 1.153509 CGACCGGATACAACCCACC 60.154 63.158 9.46 0.00 0.00 4.61
87 88 3.021473 GCCGACCGGATACAACCCA 62.021 63.158 9.46 0.00 37.50 4.51
88 89 2.202974 GCCGACCGGATACAACCC 60.203 66.667 9.46 0.00 37.50 4.11
89 90 2.584143 CGCCGACCGGATACAACC 60.584 66.667 9.46 0.00 37.50 3.77
90 91 3.259751 GCGCCGACCGGATACAAC 61.260 66.667 9.46 0.00 37.50 3.32
91 92 4.517815 GGCGCCGACCGGATACAA 62.518 66.667 12.58 0.00 37.50 2.41
117 118 4.179579 GCAAAGCGCGGATGACCC 62.180 66.667 8.83 0.00 0.00 4.46
118 119 4.179579 GGCAAAGCGCGGATGACC 62.180 66.667 8.83 9.91 43.84 4.02
120 121 4.751093 TCGGCAAAGCGCGGATGA 62.751 61.111 8.83 0.70 44.29 2.92
129 130 4.093952 CACGGCAGCTCGGCAAAG 62.094 66.667 7.98 0.00 41.26 2.77
142 143 1.068434 AGAAACAAATGCCAACCACGG 59.932 47.619 0.00 0.00 0.00 4.94
144 145 4.058721 AGAAGAAACAAATGCCAACCAC 57.941 40.909 0.00 0.00 0.00 4.16
145 146 4.442753 GGAAGAAGAAACAAATGCCAACCA 60.443 41.667 0.00 0.00 0.00 3.67
146 147 4.058124 GGAAGAAGAAACAAATGCCAACC 58.942 43.478 0.00 0.00 0.00 3.77
147 148 4.948847 AGGAAGAAGAAACAAATGCCAAC 58.051 39.130 0.00 0.00 0.00 3.77
150 151 6.283694 AGAAAAGGAAGAAGAAACAAATGCC 58.716 36.000 0.00 0.00 0.00 4.40
151 152 7.776933 AAGAAAAGGAAGAAGAAACAAATGC 57.223 32.000 0.00 0.00 0.00 3.56
152 153 9.977762 CAAAAGAAAAGGAAGAAGAAACAAATG 57.022 29.630 0.00 0.00 0.00 2.32
153 154 9.942850 TCAAAAGAAAAGGAAGAAGAAACAAAT 57.057 25.926 0.00 0.00 0.00 2.32
155 156 9.369904 CATCAAAAGAAAAGGAAGAAGAAACAA 57.630 29.630 0.00 0.00 0.00 2.83
156 157 8.531146 ACATCAAAAGAAAAGGAAGAAGAAACA 58.469 29.630 0.00 0.00 0.00 2.83
157 158 8.811378 CACATCAAAAGAAAAGGAAGAAGAAAC 58.189 33.333 0.00 0.00 0.00 2.78
158 159 8.531146 ACACATCAAAAGAAAAGGAAGAAGAAA 58.469 29.630 0.00 0.00 0.00 2.52
159 160 8.066612 ACACATCAAAAGAAAAGGAAGAAGAA 57.933 30.769 0.00 0.00 0.00 2.52
160 161 7.645058 ACACATCAAAAGAAAAGGAAGAAGA 57.355 32.000 0.00 0.00 0.00 2.87
161 162 7.761249 ACAACACATCAAAAGAAAAGGAAGAAG 59.239 33.333 0.00 0.00 0.00 2.85
162 163 7.545265 CACAACACATCAAAAGAAAAGGAAGAA 59.455 33.333 0.00 0.00 0.00 2.52
163 164 7.035004 CACAACACATCAAAAGAAAAGGAAGA 58.965 34.615 0.00 0.00 0.00 2.87
164 165 6.237915 GCACAACACATCAAAAGAAAAGGAAG 60.238 38.462 0.00 0.00 0.00 3.46
166 167 5.105392 AGCACAACACATCAAAAGAAAAGGA 60.105 36.000 0.00 0.00 0.00 3.36
168 169 5.501252 GCAGCACAACACATCAAAAGAAAAG 60.501 40.000 0.00 0.00 0.00 2.27
169 170 4.329528 GCAGCACAACACATCAAAAGAAAA 59.670 37.500 0.00 0.00 0.00 2.29
170 171 3.864583 GCAGCACAACACATCAAAAGAAA 59.135 39.130 0.00 0.00 0.00 2.52
171 172 3.130869 AGCAGCACAACACATCAAAAGAA 59.869 39.130 0.00 0.00 0.00 2.52
173 174 3.047796 GAGCAGCACAACACATCAAAAG 58.952 45.455 0.00 0.00 0.00 2.27
175 176 1.002576 CGAGCAGCACAACACATCAAA 60.003 47.619 0.00 0.00 0.00 2.69
195 196 3.248602 CCCAATACAAAGATCGCTGTAGC 59.751 47.826 13.26 0.00 31.81 3.58
196 197 4.271049 CACCCAATACAAAGATCGCTGTAG 59.729 45.833 13.26 5.08 31.81 2.74
198 199 3.009723 CACCCAATACAAAGATCGCTGT 58.990 45.455 7.71 7.71 0.00 4.40
201 202 3.427503 CCAACACCCAATACAAAGATCGC 60.428 47.826 0.00 0.00 0.00 4.58
203 204 5.469479 CAACCAACACCCAATACAAAGATC 58.531 41.667 0.00 0.00 0.00 2.75
204 205 4.262420 GCAACCAACACCCAATACAAAGAT 60.262 41.667 0.00 0.00 0.00 2.40
205 206 3.068873 GCAACCAACACCCAATACAAAGA 59.931 43.478 0.00 0.00 0.00 2.52
206 207 3.069443 AGCAACCAACACCCAATACAAAG 59.931 43.478 0.00 0.00 0.00 2.77
207 208 3.034635 AGCAACCAACACCCAATACAAA 58.965 40.909 0.00 0.00 0.00 2.83
210 211 3.389221 CAAAGCAACCAACACCCAATAC 58.611 45.455 0.00 0.00 0.00 1.89
211 212 2.366916 CCAAAGCAACCAACACCCAATA 59.633 45.455 0.00 0.00 0.00 1.90
214 215 0.324738 TCCAAAGCAACCAACACCCA 60.325 50.000 0.00 0.00 0.00 4.51
215 216 0.827368 TTCCAAAGCAACCAACACCC 59.173 50.000 0.00 0.00 0.00 4.61
216 217 2.908688 ATTCCAAAGCAACCAACACC 57.091 45.000 0.00 0.00 0.00 4.16
217 218 4.314740 TGTATTCCAAAGCAACCAACAC 57.685 40.909 0.00 0.00 0.00 3.32
218 219 5.344743 TTTGTATTCCAAAGCAACCAACA 57.655 34.783 0.00 0.00 38.12 3.33
228 229 1.075698 TCCCCCGCTTTGTATTCCAAA 59.924 47.619 0.00 0.00 40.71 3.28
229 230 0.699399 TCCCCCGCTTTGTATTCCAA 59.301 50.000 0.00 0.00 0.00 3.53
230 231 0.699399 TTCCCCCGCTTTGTATTCCA 59.301 50.000 0.00 0.00 0.00 3.53
231 232 1.475280 GTTTCCCCCGCTTTGTATTCC 59.525 52.381 0.00 0.00 0.00 3.01
233 234 1.552578 GGTTTCCCCCGCTTTGTATT 58.447 50.000 0.00 0.00 0.00 1.89
234 235 0.323999 GGGTTTCCCCCGCTTTGTAT 60.324 55.000 0.00 0.00 45.80 2.29
256 257 9.990360 AGAAAAAGAAGAAACACTTTTACCAAA 57.010 25.926 0.00 0.00 42.80 3.28
257 258 9.634163 GAGAAAAAGAAGAAACACTTTTACCAA 57.366 29.630 0.00 0.00 42.80 3.67
259 260 8.467598 AGGAGAAAAAGAAGAAACACTTTTACC 58.532 33.333 0.00 0.00 42.80 2.85
260 261 9.504710 GAGGAGAAAAAGAAGAAACACTTTTAC 57.495 33.333 0.00 0.00 42.80 2.01
261 262 9.238368 TGAGGAGAAAAAGAAGAAACACTTTTA 57.762 29.630 0.00 0.00 42.80 1.52
264 265 6.183360 CGTGAGGAGAAAAAGAAGAAACACTT 60.183 38.462 0.00 0.00 42.03 3.16
265 266 5.294552 CGTGAGGAGAAAAAGAAGAAACACT 59.705 40.000 0.00 0.00 0.00 3.55
266 267 5.502606 CGTGAGGAGAAAAAGAAGAAACAC 58.497 41.667 0.00 0.00 0.00 3.32
267 268 4.035208 GCGTGAGGAGAAAAAGAAGAAACA 59.965 41.667 0.00 0.00 0.00 2.83
268 269 4.273724 AGCGTGAGGAGAAAAAGAAGAAAC 59.726 41.667 0.00 0.00 0.00 2.78
269 270 4.451900 AGCGTGAGGAGAAAAAGAAGAAA 58.548 39.130 0.00 0.00 0.00 2.52
270 271 4.073293 AGCGTGAGGAGAAAAAGAAGAA 57.927 40.909 0.00 0.00 0.00 2.52
272 273 4.061596 AGAAGCGTGAGGAGAAAAAGAAG 58.938 43.478 0.00 0.00 0.00 2.85
273 274 4.073293 AGAAGCGTGAGGAGAAAAAGAA 57.927 40.909 0.00 0.00 0.00 2.52
274 275 3.753294 AGAAGCGTGAGGAGAAAAAGA 57.247 42.857 0.00 0.00 0.00 2.52
275 276 4.061596 AGAAGAAGCGTGAGGAGAAAAAG 58.938 43.478 0.00 0.00 0.00 2.27
276 277 4.058817 GAGAAGAAGCGTGAGGAGAAAAA 58.941 43.478 0.00 0.00 0.00 1.94
277 278 3.322254 AGAGAAGAAGCGTGAGGAGAAAA 59.678 43.478 0.00 0.00 0.00 2.29
278 279 2.894126 AGAGAAGAAGCGTGAGGAGAAA 59.106 45.455 0.00 0.00 0.00 2.52
279 280 2.490115 GAGAGAAGAAGCGTGAGGAGAA 59.510 50.000 0.00 0.00 0.00 2.87
280 281 2.088423 GAGAGAAGAAGCGTGAGGAGA 58.912 52.381 0.00 0.00 0.00 3.71
281 282 2.091541 AGAGAGAAGAAGCGTGAGGAG 58.908 52.381 0.00 0.00 0.00 3.69
282 283 2.088423 GAGAGAGAAGAAGCGTGAGGA 58.912 52.381 0.00 0.00 0.00 3.71
283 284 1.202132 CGAGAGAGAAGAAGCGTGAGG 60.202 57.143 0.00 0.00 0.00 3.86
284 285 1.202132 CCGAGAGAGAAGAAGCGTGAG 60.202 57.143 0.00 0.00 0.00 3.51
285 286 0.805614 CCGAGAGAGAAGAAGCGTGA 59.194 55.000 0.00 0.00 0.00 4.35
286 287 0.179150 CCCGAGAGAGAAGAAGCGTG 60.179 60.000 0.00 0.00 0.00 5.34
287 288 0.322636 TCCCGAGAGAGAAGAAGCGT 60.323 55.000 0.00 0.00 0.00 5.07
288 289 1.028905 ATCCCGAGAGAGAAGAAGCG 58.971 55.000 0.00 0.00 0.00 4.68
289 290 2.028130 TCATCCCGAGAGAGAAGAAGC 58.972 52.381 0.00 0.00 0.00 3.86
291 292 3.445450 CAGTTCATCCCGAGAGAGAAGAA 59.555 47.826 0.00 0.00 0.00 2.52
292 293 3.020274 CAGTTCATCCCGAGAGAGAAGA 58.980 50.000 0.00 0.00 0.00 2.87
293 294 3.020274 TCAGTTCATCCCGAGAGAGAAG 58.980 50.000 0.00 0.00 0.00 2.85
297 298 3.165875 AGTTTCAGTTCATCCCGAGAGA 58.834 45.455 0.00 0.00 0.00 3.10
299 300 2.233922 GGAGTTTCAGTTCATCCCGAGA 59.766 50.000 0.00 0.00 0.00 4.04
300 301 2.622436 GGAGTTTCAGTTCATCCCGAG 58.378 52.381 0.00 0.00 0.00 4.63
301 302 1.067142 CGGAGTTTCAGTTCATCCCGA 60.067 52.381 0.00 0.00 38.10 5.14
302 303 1.359848 CGGAGTTTCAGTTCATCCCG 58.640 55.000 0.00 0.00 0.00 5.14
303 304 1.739067 CCGGAGTTTCAGTTCATCCC 58.261 55.000 0.00 0.00 0.00 3.85
304 305 1.087501 GCCGGAGTTTCAGTTCATCC 58.912 55.000 5.05 0.00 0.00 3.51
305 306 1.087501 GGCCGGAGTTTCAGTTCATC 58.912 55.000 5.05 0.00 0.00 2.92
306 307 0.400213 TGGCCGGAGTTTCAGTTCAT 59.600 50.000 5.05 0.00 0.00 2.57
307 308 0.250295 CTGGCCGGAGTTTCAGTTCA 60.250 55.000 5.28 0.00 0.00 3.18
308 309 1.578206 GCTGGCCGGAGTTTCAGTTC 61.578 60.000 18.31 0.00 0.00 3.01
309 310 1.600916 GCTGGCCGGAGTTTCAGTT 60.601 57.895 18.31 0.00 0.00 3.16
310 311 2.032681 GCTGGCCGGAGTTTCAGT 59.967 61.111 18.31 0.00 0.00 3.41
311 312 2.747855 GGCTGGCCGGAGTTTCAG 60.748 66.667 18.31 5.22 0.00 3.02
312 313 3.551496 CTGGCTGGCCGGAGTTTCA 62.551 63.158 18.31 3.86 45.10 2.69
313 314 2.747855 CTGGCTGGCCGGAGTTTC 60.748 66.667 18.31 0.00 45.10 2.78
362 363 4.874977 GTAGGCTGGAGCGTCGCC 62.875 72.222 14.86 5.33 44.09 5.54
364 365 4.554363 CGGTAGGCTGGAGCGTCG 62.554 72.222 0.00 0.00 43.26 5.12
368 369 2.125512 CACACGGTAGGCTGGAGC 60.126 66.667 0.00 0.00 41.14 4.70
370 371 2.603473 AGCACACGGTAGGCTGGA 60.603 61.111 0.00 0.00 36.34 3.86
371 372 2.125512 GAGCACACGGTAGGCTGG 60.126 66.667 10.03 0.00 38.15 4.85
372 373 2.125512 GGAGCACACGGTAGGCTG 60.126 66.667 10.03 0.00 38.15 4.85
373 374 3.760035 CGGAGCACACGGTAGGCT 61.760 66.667 5.52 5.52 41.35 4.58
374 375 4.814294 CCGGAGCACACGGTAGGC 62.814 72.222 0.00 0.00 46.03 3.93
386 387 4.537433 GGTAGCAGCTGGCCGGAG 62.537 72.222 18.31 8.06 46.50 4.63
389 390 4.880537 CTCGGTAGCAGCTGGCCG 62.881 72.222 25.55 25.55 46.50 6.13
404 405 4.219999 GAGCAGGCGGAGGAGCTC 62.220 72.222 4.71 4.71 45.50 4.09
458 459 2.127156 CGTAAAACCGGCCAACGC 60.127 61.111 0.00 0.00 42.52 4.84
459 460 2.557298 CCGTAAAACCGGCCAACG 59.443 61.111 0.00 6.82 41.78 4.10
460 461 0.961857 ATCCCGTAAAACCGGCCAAC 60.962 55.000 0.00 0.00 46.71 3.77
461 462 0.961358 CATCCCGTAAAACCGGCCAA 60.961 55.000 0.00 0.00 46.71 4.52
462 463 1.377463 CATCCCGTAAAACCGGCCA 60.377 57.895 0.00 0.00 46.71 5.36
463 464 2.767445 GCATCCCGTAAAACCGGCC 61.767 63.158 0.00 0.00 46.71 6.13
464 465 1.712018 GAGCATCCCGTAAAACCGGC 61.712 60.000 0.00 0.00 46.71 6.13
466 467 1.444836 TTGAGCATCCCGTAAAACCG 58.555 50.000 0.00 0.00 0.00 4.44
467 468 3.926821 TTTTGAGCATCCCGTAAAACC 57.073 42.857 0.00 0.00 0.00 3.27
535 536 8.932434 AGCACTCATCCGTCTCATATATATAT 57.068 34.615 0.00 0.00 0.00 0.86
536 537 8.214364 AGAGCACTCATCCGTCTCATATATATA 58.786 37.037 0.00 0.00 0.00 0.86
537 538 7.059788 AGAGCACTCATCCGTCTCATATATAT 58.940 38.462 0.00 0.00 0.00 0.86
538 539 6.418946 AGAGCACTCATCCGTCTCATATATA 58.581 40.000 0.00 0.00 0.00 0.86
540 541 4.657013 AGAGCACTCATCCGTCTCATATA 58.343 43.478 0.00 0.00 0.00 0.86
541 542 3.495331 AGAGCACTCATCCGTCTCATAT 58.505 45.455 0.00 0.00 0.00 1.78
543 544 1.774110 AGAGCACTCATCCGTCTCAT 58.226 50.000 0.00 0.00 0.00 2.90
544 545 2.420058 TAGAGCACTCATCCGTCTCA 57.580 50.000 0.00 0.00 0.00 3.27
545 546 4.276183 TGTATTAGAGCACTCATCCGTCTC 59.724 45.833 0.00 0.00 0.00 3.36
547 548 4.291783 GTGTATTAGAGCACTCATCCGTC 58.708 47.826 0.00 0.00 33.22 4.79
548 549 3.243101 CGTGTATTAGAGCACTCATCCGT 60.243 47.826 0.00 0.00 33.78 4.69
549 550 3.003378 TCGTGTATTAGAGCACTCATCCG 59.997 47.826 0.00 0.00 33.78 4.18
550 551 4.569761 TCGTGTATTAGAGCACTCATCC 57.430 45.455 0.00 0.00 33.78 3.51
551 552 6.037098 AGTTTCGTGTATTAGAGCACTCATC 58.963 40.000 0.00 0.00 33.78 2.92
553 554 5.386958 AGTTTCGTGTATTAGAGCACTCA 57.613 39.130 0.00 0.00 33.78 3.41
554 555 6.805271 TGTAAGTTTCGTGTATTAGAGCACTC 59.195 38.462 0.00 0.00 33.78 3.51
556 557 6.034683 CCTGTAAGTTTCGTGTATTAGAGCAC 59.965 42.308 0.00 0.00 0.00 4.40
557 558 6.071784 TCCTGTAAGTTTCGTGTATTAGAGCA 60.072 38.462 0.00 0.00 0.00 4.26
558 559 6.327934 TCCTGTAAGTTTCGTGTATTAGAGC 58.672 40.000 0.00 0.00 0.00 4.09
560 561 9.961265 CATATCCTGTAAGTTTCGTGTATTAGA 57.039 33.333 0.00 0.00 0.00 2.10
561 562 9.745880 ACATATCCTGTAAGTTTCGTGTATTAG 57.254 33.333 0.00 0.00 35.91 1.73
565 566 8.742777 ACTAACATATCCTGTAAGTTTCGTGTA 58.257 33.333 0.00 0.00 36.98 2.90
567 568 8.475331 AACTAACATATCCTGTAAGTTTCGTG 57.525 34.615 0.00 0.00 36.98 4.35
603 604 8.364894 GGTACAGGTTAAAAAGGAACATCAAAT 58.635 33.333 0.00 0.00 0.00 2.32
604 605 7.342284 TGGTACAGGTTAAAAAGGAACATCAAA 59.658 33.333 0.00 0.00 0.00 2.69
605 606 6.834451 TGGTACAGGTTAAAAAGGAACATCAA 59.166 34.615 0.00 0.00 0.00 2.57
606 607 6.366340 TGGTACAGGTTAAAAAGGAACATCA 58.634 36.000 0.00 0.00 0.00 3.07
607 608 6.887626 TGGTACAGGTTAAAAAGGAACATC 57.112 37.500 0.00 0.00 0.00 3.06
634 635 7.362920 CCCATAAAAACGGTCAAATCTTCAGAT 60.363 37.037 0.00 0.00 36.07 2.90
635 636 6.072175 CCCATAAAAACGGTCAAATCTTCAGA 60.072 38.462 0.00 0.00 0.00 3.27
638 639 6.020971 ACCCATAAAAACGGTCAAATCTTC 57.979 37.500 0.00 0.00 0.00 2.87
639 640 6.413783 AACCCATAAAAACGGTCAAATCTT 57.586 33.333 0.00 0.00 0.00 2.40
640 641 6.413783 AAACCCATAAAAACGGTCAAATCT 57.586 33.333 0.00 0.00 0.00 2.40
641 642 7.485418 AAAAACCCATAAAAACGGTCAAATC 57.515 32.000 0.00 0.00 0.00 2.17
642 643 8.994170 CATAAAAACCCATAAAAACGGTCAAAT 58.006 29.630 0.00 0.00 0.00 2.32
643 644 7.441458 CCATAAAAACCCATAAAAACGGTCAAA 59.559 33.333 0.00 0.00 0.00 2.69
644 645 6.929606 CCATAAAAACCCATAAAAACGGTCAA 59.070 34.615 0.00 0.00 0.00 3.18
645 646 6.267014 TCCATAAAAACCCATAAAAACGGTCA 59.733 34.615 0.00 0.00 0.00 4.02
646 647 6.689554 TCCATAAAAACCCATAAAAACGGTC 58.310 36.000 0.00 0.00 0.00 4.79
647 648 6.667558 TCCATAAAAACCCATAAAAACGGT 57.332 33.333 0.00 0.00 0.00 4.83
648 649 8.038351 AGATTCCATAAAAACCCATAAAAACGG 58.962 33.333 0.00 0.00 0.00 4.44
650 651 9.719355 ACAGATTCCATAAAAACCCATAAAAAC 57.281 29.630 0.00 0.00 0.00 2.43
654 655 9.983024 TCTAACAGATTCCATAAAAACCCATAA 57.017 29.630 0.00 0.00 0.00 1.90
655 656 9.627123 CTCTAACAGATTCCATAAAAACCCATA 57.373 33.333 0.00 0.00 0.00 2.74
658 659 8.753497 ATCTCTAACAGATTCCATAAAAACCC 57.247 34.615 0.00 0.00 38.95 4.11
672 673 4.142359 GGAACGCTGAGAATCTCTAACAGA 60.142 45.833 11.92 0.00 34.92 3.41
673 674 4.109050 GGAACGCTGAGAATCTCTAACAG 58.891 47.826 11.92 2.20 34.92 3.16
674 675 3.509967 TGGAACGCTGAGAATCTCTAACA 59.490 43.478 11.92 0.00 34.92 2.41
678 679 3.030291 AGATGGAACGCTGAGAATCTCT 58.970 45.455 11.92 0.00 34.92 3.10
679 680 3.122297 CAGATGGAACGCTGAGAATCTC 58.878 50.000 2.75 2.75 35.78 2.75
680 681 2.741228 GCAGATGGAACGCTGAGAATCT 60.741 50.000 0.00 0.00 35.78 2.40
681 682 1.596727 GCAGATGGAACGCTGAGAATC 59.403 52.381 0.00 0.00 35.78 2.52
683 684 0.321346 TGCAGATGGAACGCTGAGAA 59.679 50.000 0.00 0.00 35.78 2.87
685 686 1.376543 AATGCAGATGGAACGCTGAG 58.623 50.000 0.00 0.00 35.78 3.35
687 688 1.530441 CGAAATGCAGATGGAACGCTG 60.530 52.381 0.00 0.00 36.62 5.18
688 689 0.729116 CGAAATGCAGATGGAACGCT 59.271 50.000 0.00 0.00 0.00 5.07
689 690 0.863119 GCGAAATGCAGATGGAACGC 60.863 55.000 0.00 0.00 45.45 4.84
690 691 3.224955 GCGAAATGCAGATGGAACG 57.775 52.632 0.00 0.00 45.45 3.95
701 702 5.569059 GGTTTTTGACATACAGAGCGAAATG 59.431 40.000 0.00 0.00 0.00 2.32
702 703 5.240623 TGGTTTTTGACATACAGAGCGAAAT 59.759 36.000 0.00 0.00 0.00 2.17
704 705 4.024387 GTGGTTTTTGACATACAGAGCGAA 60.024 41.667 0.00 0.00 0.00 4.70
706 707 3.664276 CGTGGTTTTTGACATACAGAGCG 60.664 47.826 0.00 0.00 0.00 5.03
707 708 3.496884 TCGTGGTTTTTGACATACAGAGC 59.503 43.478 0.00 0.00 0.00 4.09
708 709 4.152402 CCTCGTGGTTTTTGACATACAGAG 59.848 45.833 0.00 0.00 0.00 3.35
709 710 4.062293 CCTCGTGGTTTTTGACATACAGA 58.938 43.478 0.00 0.00 0.00 3.41
710 711 3.364964 GCCTCGTGGTTTTTGACATACAG 60.365 47.826 5.26 0.00 35.27 2.74
711 712 2.550606 GCCTCGTGGTTTTTGACATACA 59.449 45.455 5.26 0.00 35.27 2.29
712 713 2.412325 CGCCTCGTGGTTTTTGACATAC 60.412 50.000 5.26 0.00 35.27 2.39
713 714 1.801771 CGCCTCGTGGTTTTTGACATA 59.198 47.619 5.26 0.00 35.27 2.29
714 715 0.591170 CGCCTCGTGGTTTTTGACAT 59.409 50.000 5.26 0.00 35.27 3.06
716 717 1.281656 CCGCCTCGTGGTTTTTGAC 59.718 57.895 5.26 0.00 35.27 3.18
717 718 1.894756 CCCGCCTCGTGGTTTTTGA 60.895 57.895 5.26 0.00 35.27 2.69
720 721 4.572571 TGCCCGCCTCGTGGTTTT 62.573 61.111 5.26 0.00 35.27 2.43
726 727 4.753662 TACCTCTGCCCGCCTCGT 62.754 66.667 0.00 0.00 0.00 4.18
727 728 4.208686 GTACCTCTGCCCGCCTCG 62.209 72.222 0.00 0.00 0.00 4.63
728 729 2.760385 AGTACCTCTGCCCGCCTC 60.760 66.667 0.00 0.00 0.00 4.70
730 731 3.851128 GGAGTACCTCTGCCCGCC 61.851 72.222 0.00 0.00 0.00 6.13
731 732 4.208686 CGGAGTACCTCTGCCCGC 62.209 72.222 0.00 0.00 33.47 6.13
732 733 1.452651 TACGGAGTACCTCTGCCCG 60.453 63.158 0.00 0.00 45.11 6.13
733 734 4.672251 TACGGAGTACCTCTGCCC 57.328 61.111 0.00 0.00 45.11 5.36
742 743 2.755469 GGTGGGGCGTACGGAGTA 60.755 66.667 18.39 0.00 45.11 2.59
748 749 4.185286 GATGGGGGTGGGGCGTAC 62.185 72.222 0.00 0.00 0.00 3.67
749 750 4.424867 AGATGGGGGTGGGGCGTA 62.425 66.667 0.00 0.00 0.00 4.42
753 754 3.480133 GACGAGATGGGGGTGGGG 61.480 72.222 0.00 0.00 0.00 4.96
754 755 2.365635 AGACGAGATGGGGGTGGG 60.366 66.667 0.00 0.00 0.00 4.61
755 756 1.685765 TGAGACGAGATGGGGGTGG 60.686 63.158 0.00 0.00 0.00 4.61
756 757 1.257750 TGTGAGACGAGATGGGGGTG 61.258 60.000 0.00 0.00 0.00 4.61
757 758 1.078528 TGTGAGACGAGATGGGGGT 59.921 57.895 0.00 0.00 0.00 4.95
758 759 1.257750 TGTGTGAGACGAGATGGGGG 61.258 60.000 0.00 0.00 0.00 5.40
759 760 0.608130 TTGTGTGAGACGAGATGGGG 59.392 55.000 0.00 0.00 0.00 4.96
760 761 2.341257 CTTTGTGTGAGACGAGATGGG 58.659 52.381 0.00 0.00 0.00 4.00
761 762 1.728971 GCTTTGTGTGAGACGAGATGG 59.271 52.381 0.00 0.00 0.00 3.51
762 763 1.728971 GGCTTTGTGTGAGACGAGATG 59.271 52.381 0.00 0.00 0.00 2.90
763 764 1.344438 TGGCTTTGTGTGAGACGAGAT 59.656 47.619 0.00 0.00 0.00 2.75
765 766 1.528586 CTTGGCTTTGTGTGAGACGAG 59.471 52.381 0.00 0.00 0.00 4.18
766 767 1.581934 CTTGGCTTTGTGTGAGACGA 58.418 50.000 0.00 0.00 0.00 4.20
767 768 0.040958 GCTTGGCTTTGTGTGAGACG 60.041 55.000 0.00 0.00 0.00 4.18
768 769 1.002033 CTGCTTGGCTTTGTGTGAGAC 60.002 52.381 0.00 0.00 0.00 3.36
769 770 1.311859 CTGCTTGGCTTTGTGTGAGA 58.688 50.000 0.00 0.00 0.00 3.27
770 771 0.313043 CCTGCTTGGCTTTGTGTGAG 59.687 55.000 0.00 0.00 0.00 3.51
771 772 2.417978 CCTGCTTGGCTTTGTGTGA 58.582 52.632 0.00 0.00 0.00 3.58
781 782 2.913578 TGGTGCTTGCCTGCTTGG 60.914 61.111 0.00 0.00 39.35 3.61
782 783 2.337532 GTGGTGCTTGCCTGCTTG 59.662 61.111 0.00 0.00 0.00 4.01
784 785 2.934363 AAAGGTGGTGCTTGCCTGCT 62.934 55.000 0.00 0.00 32.16 4.24
785 786 2.426122 GAAAGGTGGTGCTTGCCTGC 62.426 60.000 0.00 0.00 32.16 4.85
786 787 0.825010 AGAAAGGTGGTGCTTGCCTG 60.825 55.000 0.00 0.00 32.16 4.85
788 789 0.823356 TGAGAAAGGTGGTGCTTGCC 60.823 55.000 0.00 0.00 0.00 4.52
789 790 1.200948 GATGAGAAAGGTGGTGCTTGC 59.799 52.381 0.00 0.00 0.00 4.01
790 791 2.746362 GAGATGAGAAAGGTGGTGCTTG 59.254 50.000 0.00 0.00 0.00 4.01
791 792 2.613977 CGAGATGAGAAAGGTGGTGCTT 60.614 50.000 0.00 0.00 0.00 3.91
793 794 1.338200 ACGAGATGAGAAAGGTGGTGC 60.338 52.381 0.00 0.00 0.00 5.01
794 795 2.232452 AGACGAGATGAGAAAGGTGGTG 59.768 50.000 0.00 0.00 0.00 4.17
795 796 2.494073 GAGACGAGATGAGAAAGGTGGT 59.506 50.000 0.00 0.00 0.00 4.16
796 797 2.493675 TGAGACGAGATGAGAAAGGTGG 59.506 50.000 0.00 0.00 0.00 4.61
797 798 3.857549 TGAGACGAGATGAGAAAGGTG 57.142 47.619 0.00 0.00 0.00 4.00
798 799 4.097741 CAGATGAGACGAGATGAGAAAGGT 59.902 45.833 0.00 0.00 0.00 3.50
799 800 4.337836 TCAGATGAGACGAGATGAGAAAGG 59.662 45.833 0.00 0.00 0.00 3.11
800 801 5.066375 AGTCAGATGAGACGAGATGAGAAAG 59.934 44.000 0.00 0.00 43.24 2.62
801 802 4.946772 AGTCAGATGAGACGAGATGAGAAA 59.053 41.667 0.00 0.00 43.24 2.52
802 803 4.522114 AGTCAGATGAGACGAGATGAGAA 58.478 43.478 0.00 0.00 43.24 2.87
803 804 4.126437 GAGTCAGATGAGACGAGATGAGA 58.874 47.826 0.00 0.00 43.24 3.27
804 805 3.876320 TGAGTCAGATGAGACGAGATGAG 59.124 47.826 0.00 0.00 43.24 2.90
806 807 3.376546 TGTGAGTCAGATGAGACGAGATG 59.623 47.826 0.00 0.00 43.24 2.90
808 809 2.744741 GTGTGAGTCAGATGAGACGAGA 59.255 50.000 0.00 0.00 43.24 4.04
809 810 2.485814 TGTGTGAGTCAGATGAGACGAG 59.514 50.000 0.00 0.00 43.24 4.18
810 811 2.485814 CTGTGTGAGTCAGATGAGACGA 59.514 50.000 0.00 0.00 43.24 4.20
811 812 2.415224 CCTGTGTGAGTCAGATGAGACG 60.415 54.545 0.00 0.00 43.24 4.18
812 813 2.673610 GCCTGTGTGAGTCAGATGAGAC 60.674 54.545 0.00 0.00 38.81 3.36
814 815 1.405256 GGCCTGTGTGAGTCAGATGAG 60.405 57.143 0.00 0.00 35.20 2.90
816 817 0.322648 TGGCCTGTGTGAGTCAGATG 59.677 55.000 3.32 0.00 35.20 2.90
817 818 1.002888 CTTGGCCTGTGTGAGTCAGAT 59.997 52.381 3.32 0.00 35.20 2.90
818 819 0.394192 CTTGGCCTGTGTGAGTCAGA 59.606 55.000 3.32 0.00 35.20 3.27
819 820 1.233285 GCTTGGCCTGTGTGAGTCAG 61.233 60.000 3.32 0.00 0.00 3.51
820 821 1.227943 GCTTGGCCTGTGTGAGTCA 60.228 57.895 3.32 0.00 0.00 3.41
821 822 2.320587 CGCTTGGCCTGTGTGAGTC 61.321 63.158 3.32 0.00 0.00 3.36
823 824 2.786539 TAGCGCTTGGCCTGTGTGAG 62.787 60.000 18.68 0.00 45.17 3.51
825 826 1.709147 GATAGCGCTTGGCCTGTGTG 61.709 60.000 18.68 1.59 45.17 3.82
827 828 2.182842 GGATAGCGCTTGGCCTGTG 61.183 63.158 18.68 4.79 45.17 3.66
829 830 1.890979 CAGGATAGCGCTTGGCCTG 60.891 63.158 27.32 27.32 45.17 4.85
832 833 2.203126 AGCAGGATAGCGCTTGGC 60.203 61.111 18.68 12.74 44.05 4.52
833 834 0.250209 ATGAGCAGGATAGCGCTTGG 60.250 55.000 18.68 1.77 38.99 3.61
836 837 0.975135 ATGATGAGCAGGATAGCGCT 59.025 50.000 17.26 17.26 42.42 5.92
838 839 2.538437 GCTATGATGAGCAGGATAGCG 58.462 52.381 0.00 0.00 42.36 4.26
839 840 2.235650 TGGCTATGATGAGCAGGATAGC 59.764 50.000 12.01 12.01 44.76 2.97
840 841 4.161754 TGATGGCTATGATGAGCAGGATAG 59.838 45.833 0.00 0.00 44.76 2.08
842 843 2.910977 TGATGGCTATGATGAGCAGGAT 59.089 45.455 0.00 0.00 44.76 3.24
843 844 2.038164 GTGATGGCTATGATGAGCAGGA 59.962 50.000 0.00 0.00 44.76 3.86
844 845 2.424557 GTGATGGCTATGATGAGCAGG 58.575 52.381 0.00 0.00 44.76 4.85
845 846 2.038689 AGGTGATGGCTATGATGAGCAG 59.961 50.000 0.00 0.00 44.76 4.24
846 847 2.052468 AGGTGATGGCTATGATGAGCA 58.948 47.619 0.00 0.00 44.76 4.26
847 848 2.855209 AGGTGATGGCTATGATGAGC 57.145 50.000 0.00 0.00 42.05 4.26
873 3067 1.961180 CTTAGCTCGTGTGGGAGGGG 61.961 65.000 0.00 0.00 34.56 4.79
874 3068 1.517832 CTTAGCTCGTGTGGGAGGG 59.482 63.158 0.00 0.00 34.56 4.30
875 3069 1.153549 GCTTAGCTCGTGTGGGAGG 60.154 63.158 0.00 0.00 34.56 4.30
876 3070 1.517257 CGCTTAGCTCGTGTGGGAG 60.517 63.158 1.76 0.00 37.11 4.30
927 3127 4.451544 GAGTCCTCTCCTGGCTGT 57.548 61.111 0.00 0.00 34.87 4.40
937 3143 0.387565 GAGAAGCCGATGGAGTCCTC 59.612 60.000 11.33 4.73 0.00 3.71
983 3189 1.002662 ATCCCCTGCTCTGCTCTGA 59.997 57.895 0.00 0.00 0.00 3.27
1073 3283 1.306141 ATGGAGAAGGTGGAGGCGA 60.306 57.895 0.00 0.00 0.00 5.54
1252 3525 0.821711 CGGCCTGTGTCCTCCAAAAA 60.822 55.000 0.00 0.00 0.00 1.94
1253 3526 1.228124 CGGCCTGTGTCCTCCAAAA 60.228 57.895 0.00 0.00 0.00 2.44
1303 3815 6.579865 TCGGGAAATTGTAGGATTCTAAGTC 58.420 40.000 0.00 0.00 0.00 3.01
1430 3958 6.801539 TCAGAATCGTTTGCAGATAAAAGT 57.198 33.333 0.00 0.00 0.00 2.66
1445 3973 5.466058 AGATTTAGCAGAGCATTCAGAATCG 59.534 40.000 0.00 0.00 0.00 3.34
1514 4048 2.916716 GCATTTTGTACATTGCAGTCGG 59.083 45.455 16.63 0.00 35.22 4.79
1590 4137 5.045140 ACTGTAAGGGGCTGCTAAGATTTAA 60.045 40.000 0.00 0.00 39.30 1.52
1640 4187 5.878332 AAGGTTTTTGTTGCTTTCCTTTG 57.122 34.783 0.00 0.00 30.95 2.77
1650 4198 4.236935 AGCGCATCATAAGGTTTTTGTTG 58.763 39.130 11.47 0.00 0.00 3.33
1669 4217 3.317603 AATGGTTCCAATTTCCAAGCG 57.682 42.857 0.00 0.00 34.80 4.68
1697 4245 6.154534 GGGACAGATTAATTACCAGCCTTTTT 59.845 38.462 0.00 0.00 0.00 1.94
1718 6161 5.407407 TCACAGAGAAACATTCTAGGGAC 57.593 43.478 0.00 0.00 40.87 4.46
1805 6248 1.821136 CAGGGAATTGAGCTTGGAACC 59.179 52.381 0.00 0.00 0.00 3.62
1980 6480 5.453762 CCATCACAGAGTCAAGGCATGTATA 60.454 44.000 0.00 0.00 0.00 1.47
1988 6491 2.224378 ACACACCATCACAGAGTCAAGG 60.224 50.000 0.00 0.00 0.00 3.61
2087 7295 1.133823 TGCCCAAGCAGTTCTGAAGAA 60.134 47.619 3.84 0.00 46.52 2.52
2190 7404 4.785346 ACTCCACATAATCTGCAGGATT 57.215 40.909 15.13 14.11 45.53 3.01
2345 7586 9.672673 AGTGCATTACTTCAGTTAATTCATACT 57.327 29.630 0.00 0.00 35.67 2.12
2348 7589 8.565896 TCAGTGCATTACTTCAGTTAATTCAT 57.434 30.769 0.00 0.00 37.60 2.57
2422 7776 2.905075 TGAGTTGCACTTATCCGGATG 58.095 47.619 27.55 13.73 0.00 3.51
2423 7777 3.470709 CATGAGTTGCACTTATCCGGAT 58.529 45.455 22.95 22.95 0.00 4.18
2495 7888 2.606795 GGAGCGCTTGTGCAAACAAATA 60.607 45.455 13.26 0.00 39.64 1.40
2587 9558 4.563140 AACTATACCGTTGGTTGACCAT 57.437 40.909 3.28 0.00 46.97 3.55
2633 9604 6.694411 GCAATGACAGCCATTAGTTCTTAATG 59.306 38.462 0.00 0.97 43.27 1.90
2706 9732 6.479884 AGTTCAAGATTCCAAGAACTGCTAT 58.520 36.000 12.46 0.00 46.30 2.97
2707 9733 5.869579 AGTTCAAGATTCCAAGAACTGCTA 58.130 37.500 12.46 0.00 46.30 3.49
2736 9762 5.410924 TGATGTTTTCACTCAGATAGACCG 58.589 41.667 0.00 0.00 0.00 4.79
3034 10072 4.023707 CACATTTCAACCAACTCTCCTGAC 60.024 45.833 0.00 0.00 0.00 3.51
3128 10200 3.274288 GCTCATAACCAACTCCCAGAAG 58.726 50.000 0.00 0.00 0.00 2.85
3259 10853 9.674824 GAAGAGATATAAAATTCCATTGCACAG 57.325 33.333 0.00 0.00 0.00 3.66
3322 10925 5.067805 CAGGGCAAAGACTAAACTGAACTTT 59.932 40.000 0.00 0.00 0.00 2.66
3503 11110 9.656040 TTACGCCTTTATCAGTTTAAGATTGTA 57.344 29.630 0.00 0.00 0.00 2.41
3934 11619 9.877137 CTAAGCTTTTTCTTCTTCTTCTTCTTC 57.123 33.333 3.20 0.00 0.00 2.87
3949 11637 1.698165 GCCAACGCCTAAGCTTTTTC 58.302 50.000 3.20 0.00 36.60 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.