AutoCloner

Multiple sequence alignment - TraesCS3A01G467800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS3A01G467800	chr3A	100.000	4475	0	0	1	4475	700942525	700946999	0.000000e+00	8264.0
1	TraesCS3A01G467800	chr3A	81.905	945	125	22	2873	3774	700893477	700894418	0.000000e+00	756.0
2	TraesCS3A01G467800	chr3A	81.698	754	111	21	3018	3746	701123806	701124557	1.780000e-168	603.0
3	TraesCS3A01G467800	chr3A	80.426	751	93	31	2056	2790	700953017	700953729	1.430000e-144	523.0
4	TraesCS3A01G467800	chr3A	80.702	627	90	18	2187	2789	701139652	701140271	4.080000e-125	459.0
5	TraesCS3A01G467800	chr3A	84.016	488	60	11	2261	2732	701123304	701123789	1.900000e-123	453.0
6	TraesCS3A01G467800	chr3A	86.992	369	38	6	2877	3239	700909030	700909394	1.500000e-109	407.0
7	TraesCS3A01G467800	chr3A	86.475	244	26	6	2191	2432	700908503	700908741	1.230000e-65	261.0
8	TraesCS3A01G467800	chr3A	79.357	373	39	19	1507	1847	701139287	701139653	1.250000e-55	228.0
9	TraesCS3A01G467800	chr3A	84.783	230	28	3	3548	3774	700911725	700911950	1.620000e-54	224.0
10	TraesCS3A01G467800	chr3A	82.000	250	24	13	2873	3121	701140251	701140480	4.570000e-45	193.0
11	TraesCS3A01G467800	chr3A	94.167	120	7	0	866	985	700959236	700959355	2.750000e-42	183.0
12	TraesCS3A01G467800	chr3A	90.977	133	12	0	3546	3678	701140899	701141031	3.560000e-41	180.0
13	TraesCS3A01G467800	chr3A	90.370	135	8	5	801	935	700891041	700891170	5.950000e-39	172.0
14	TraesCS3A01G467800	chr3A	82.836	134	15	7	805	935	701137972	701138100	3.660000e-21	113.0
15	TraesCS3A01G467800	chr3A	91.379	58	3	2	800	855	700890990	700891047	1.330000e-10	78.7
16	TraesCS3A01G467800	chr3A	89.655	58	6	0	2111	2168	700908446	700908503	1.730000e-09	75.0
17	TraesCS3A01G467800	chr3B	89.757	1484	97	23	1974	3445	755709689	755711129	0.000000e+00	1847.0
18	TraesCS3A01G467800	chr3B	90.012	811	41	11	981	1759	755708147	755708949	0.000000e+00	1013.0
19	TraesCS3A01G467800	chr3B	90.566	689	44	8	3788	4475	103402006	103401338	0.000000e+00	893.0
20	TraesCS3A01G467800	chr3B	81.398	844	103	38	1968	2791	754719781	754720590	1.360000e-179	640.0
21	TraesCS3A01G467800	chr3B	82.216	776	96	21	3039	3774	755575764	755576537	8.170000e-177	630.0
22	TraesCS3A01G467800	chr3B	79.947	758	89	40	2056	2790	755604956	755605673	2.400000e-137	499.0
23	TraesCS3A01G467800	chr3B	84.356	505	71	5	3018	3514	755771291	755771795	5.200000e-134	488.0
24	TraesCS3A01G467800	chr3B	79.745	706	92	7	2850	3514	755659986	755660681	8.770000e-127	464.0
25	TraesCS3A01G467800	chr3B	84.874	476	53	12	2309	2766	754770970	754771444	3.150000e-126	462.0
26	TraesCS3A01G467800	chr3B	80.878	638	76	24	3150	3745	755606046	755606679	1.130000e-125	460.0
27	TraesCS3A01G467800	chr3B	85.542	415	43	11	2378	2784	755575242	755575647	6.920000e-113	418.0
28	TraesCS3A01G467800	chr3B	93.309	269	18	0	3506	3774	755722087	755722355	9.020000e-107	398.0
29	TraesCS3A01G467800	chr3B	82.068	474	48	17	1508	1953	754719126	754719590	1.970000e-98	370.0
30	TraesCS3A01G467800	chr3B	87.789	303	24	7	674	976	755707803	755708092	4.290000e-90	342.0
31	TraesCS3A01G467800	chr3B	91.005	189	11	3	1754	1942	755709271	755709453	2.670000e-62	250.0
32	TraesCS3A01G467800	chr3B	91.241	137	11	1	3546	3681	756081689	756081553	7.640000e-43	185.0
33	TraesCS3A01G467800	chr3B	82.775	209	21	11	3538	3746	755660749	755660942	5.950000e-39	172.0
34	TraesCS3A01G467800	chr3B	88.060	134	15	1	1623	1756	755658038	755658170	1.670000e-34	158.0
35	TraesCS3A01G467800	chr3B	75.414	423	47	33	589	979	755603794	755604191	7.750000e-33	152.0
36	TraesCS3A01G467800	chr3B	83.444	151	20	4	2873	3021	755575632	755575779	7.810000e-28	135.0
37	TraesCS3A01G467800	chr3B	92.308	52	2	2	1528	1579	755657423	755657472	6.210000e-09	73.1
38	TraesCS3A01G467800	chr3B	95.349	43	2	0	1528	1570	754770567	754770609	8.030000e-08	69.4
39	TraesCS3A01G467800	chr6D	94.493	690	19	3	3786	4475	59625181	59625851	0.000000e+00	1046.0
40	TraesCS3A01G467800	chr4D	94.331	688	21	2	3788	4475	432947859	432947190	0.000000e+00	1038.0
41	TraesCS3A01G467800	chr4B	94.323	687	16	4	3789	4475	434460703	434461366	0.000000e+00	1031.0
42	TraesCS3A01G467800	chr4B	75.938	320	41	20	1492	1796	649490979	649491277	1.010000e-26	132.0
43	TraesCS3A01G467800	chr6A	94.323	687	5	7	3789	4475	55703472	55704124	0.000000e+00	1022.0
44	TraesCS3A01G467800	chr6A	96.545	521	18	0	15	535	222690428	222690948	0.000000e+00	863.0
45	TraesCS3A01G467800	chr7D	91.486	693	37	16	3788	4475	360329418	360330093	0.000000e+00	933.0
46	TraesCS3A01G467800	chr7B	91.105	697	39	11	3789	4475	524724264	524724947	0.000000e+00	922.0
47	TraesCS3A01G467800	chr2A	97.552	531	12	1	15	545	610714615	610715144	0.000000e+00	907.0
48	TraesCS3A01G467800	chr2A	92.235	528	20	8	3788	4313	525610270	525609762	0.000000e+00	728.0
49	TraesCS3A01G467800	chr2A	100.000	71	0	0	4405	4475	525609780	525609710	1.010000e-26	132.0
50	TraesCS3A01G467800	chr5A	96.905	517	16	0	19	535	311004012	311004528	0.000000e+00	867.0
51	TraesCS3A01G467800	chr5A	96.545	521	18	0	15	535	472460512	472461032	0.000000e+00	863.0
52	TraesCS3A01G467800	chr5A	96.367	523	19	0	15	537	685009981	685010503	0.000000e+00	861.0
53	TraesCS3A01G467800	chr5A	76.037	217	32	14	2876	3088	688244013	688244213	1.330000e-15	95.3
54	TraesCS3A01G467800	chr7A	96.045	531	21	0	15	545	330459537	330459007	0.000000e+00	865.0
55	TraesCS3A01G467800	chr7A	96.374	524	17	2	15	538	655300057	655300578	0.000000e+00	861.0
56	TraesCS3A01G467800	chr4A	96.212	528	19	1	15	542	183855693	183856219	0.000000e+00	863.0
57	TraesCS3A01G467800	chr4A	86.773	688	52	23	3789	4475	578535646	578536295	0.000000e+00	730.0
58	TraesCS3A01G467800	chr1A	96.360	522	18	1	15	536	516081231	516081751	0.000000e+00	857.0
59	TraesCS3A01G467800	chr3D	88.777	695	40	13	3789	4475	110402087	110401423	0.000000e+00	817.0
60	TraesCS3A01G467800	chr3D	86.311	694	63	18	3789	4472	565393844	565393173	0.000000e+00	726.0
61	TraesCS3A01G467800	chr3D	82.750	829	109	17	2876	3673	566422738	566421913	0.000000e+00	708.0
62	TraesCS3A01G467800	chr3D	82.464	844	97	35	1968	2791	566132229	566131417	0.000000e+00	691.0
63	TraesCS3A01G467800	chr3D	80.199	803	100	32	2876	3642	566300242	566299463	8.460000e-152	547.0
64	TraesCS3A01G467800	chr3D	84.100	478	58	11	3205	3681	566101124	566100664	3.180000e-121	446.0
65	TraesCS3A01G467800	chr3D	83.436	489	62	12	2261	2732	566300746	566300260	1.910000e-118	436.0
66	TraesCS3A01G467800	chr3D	80.143	559	70	9	2998	3519	566392607	566392053	3.270000e-101	379.0
67	TraesCS3A01G467800	chr3D	83.533	334	35	12	1635	1953	566132745	566132417	1.220000e-75	294.0
68	TraesCS3A01G467800	chr3D	80.000	430	49	17	1511	1914	566301189	566300771	2.640000e-72	283.0
69	TraesCS3A01G467800	chr3D	85.792	183	19	6	801	982	566423889	566423713	2.130000e-43	187.0
70	TraesCS3A01G467800	chr3D	93.043	115	6	2	867	979	566302059	566301945	2.770000e-37	167.0
71	TraesCS3A01G467800	chr3D	81.773	203	22	11	3544	3746	566391986	566391799	5.990000e-34	156.0
72	TraesCS3A01G467800	chr3D	83.041	171	16	5	2876	3045	566131436	566131278	4.670000e-30	143.0
73	TraesCS3A01G467800	chr3D	86.275	102	10	2	1511	1611	566137700	566137602	1.700000e-19	108.0
74	TraesCS3A01G467800	chr3D	97.917	48	1	0	808	855	566423930	566423883	2.870000e-12	84.2
75	TraesCS3A01G467800	chr3D	92.308	52	2	2	1528	1579	566394260	566394211	6.210000e-09	73.1
76	TraesCS3A01G467800	chr5B	85.408	233	21	8	4249	4475	419843796	419843571	3.480000e-56	230.0
77	TraesCS3A01G467800	chrUn	90.511	137	12	1	3546	3681	408041165	408041301	3.560000e-41	180.0

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS3A01G467800	chr3A	700942525	700946999	4474	False	8264.000000	8264	100.000000	1	4475	1	chr3A.!!$F1	4474
1	TraesCS3A01G467800	chr3A	701123304	701124557	1253	False	528.000000	603	82.857000	2261	3746	2	chr3A.!!$F6	1485
2	TraesCS3A01G467800	chr3A	700953017	700953729	712	False	523.000000	523	80.426000	2056	2790	1	chr3A.!!$F2	734
3	TraesCS3A01G467800	chr3A	700890990	700894418	3428	False	335.566667	756	87.884667	800	3774	3	chr3A.!!$F4	2974
4	TraesCS3A01G467800	chr3A	700908446	700911950	3504	False	241.750000	407	86.976250	2111	3774	4	chr3A.!!$F5	1663
5	TraesCS3A01G467800	chr3A	701137972	701141031	3059	False	234.600000	459	83.174400	805	3678	5	chr3A.!!$F7	2873
6	TraesCS3A01G467800	chr3B	103401338	103402006	668	True	893.000000	893	90.566000	3788	4475	1	chr3B.!!$R1	687
7	TraesCS3A01G467800	chr3B	755707803	755711129	3326	False	863.000000	1847	89.640750	674	3445	4	chr3B.!!$F8	2771
8	TraesCS3A01G467800	chr3B	754719126	754720590	1464	False	505.000000	640	81.733000	1508	2791	2	chr3B.!!$F3	1283
9	TraesCS3A01G467800	chr3B	755771291	755771795	504	False	488.000000	488	84.356000	3018	3514	1	chr3B.!!$F2	496
10	TraesCS3A01G467800	chr3B	755575242	755576537	1295	False	394.333333	630	83.734000	2378	3774	3	chr3B.!!$F5	1396
11	TraesCS3A01G467800	chr3B	755603794	755606679	2885	False	370.333333	499	78.746333	589	3745	3	chr3B.!!$F6	3156
12	TraesCS3A01G467800	chr3B	754770567	754771444	877	False	265.700000	462	90.111500	1528	2766	2	chr3B.!!$F4	1238
13	TraesCS3A01G467800	chr3B	755657423	755660942	3519	False	216.775000	464	85.722000	1528	3746	4	chr3B.!!$F7	2218
14	TraesCS3A01G467800	chr6D	59625181	59625851	670	False	1046.000000	1046	94.493000	3786	4475	1	chr6D.!!$F1	689
15	TraesCS3A01G467800	chr4D	432947190	432947859	669	True	1038.000000	1038	94.331000	3788	4475	1	chr4D.!!$R1	687
16	TraesCS3A01G467800	chr4B	434460703	434461366	663	False	1031.000000	1031	94.323000	3789	4475	1	chr4B.!!$F1	686
17	TraesCS3A01G467800	chr6A	55703472	55704124	652	False	1022.000000	1022	94.323000	3789	4475	1	chr6A.!!$F1	686
18	TraesCS3A01G467800	chr6A	222690428	222690948	520	False	863.000000	863	96.545000	15	535	1	chr6A.!!$F2	520
19	TraesCS3A01G467800	chr7D	360329418	360330093	675	False	933.000000	933	91.486000	3788	4475	1	chr7D.!!$F1	687
20	TraesCS3A01G467800	chr7B	524724264	524724947	683	False	922.000000	922	91.105000	3789	4475	1	chr7B.!!$F1	686
21	TraesCS3A01G467800	chr2A	610714615	610715144	529	False	907.000000	907	97.552000	15	545	1	chr2A.!!$F1	530
22	TraesCS3A01G467800	chr2A	525609710	525610270	560	True	430.000000	728	96.117500	3788	4475	2	chr2A.!!$R1	687
23	TraesCS3A01G467800	chr5A	311004012	311004528	516	False	867.000000	867	96.905000	19	535	1	chr5A.!!$F1	516
24	TraesCS3A01G467800	chr5A	472460512	472461032	520	False	863.000000	863	96.545000	15	535	1	chr5A.!!$F2	520
25	TraesCS3A01G467800	chr5A	685009981	685010503	522	False	861.000000	861	96.367000	15	537	1	chr5A.!!$F3	522
26	TraesCS3A01G467800	chr7A	330459007	330459537	530	True	865.000000	865	96.045000	15	545	1	chr7A.!!$R1	530
27	TraesCS3A01G467800	chr7A	655300057	655300578	521	False	861.000000	861	96.374000	15	538	1	chr7A.!!$F1	523
28	TraesCS3A01G467800	chr4A	183855693	183856219	526	False	863.000000	863	96.212000	15	542	1	chr4A.!!$F1	527
29	TraesCS3A01G467800	chr4A	578535646	578536295	649	False	730.000000	730	86.773000	3789	4475	1	chr4A.!!$F2	686
30	TraesCS3A01G467800	chr1A	516081231	516081751	520	False	857.000000	857	96.360000	15	536	1	chr1A.!!$F1	521
31	TraesCS3A01G467800	chr3D	110401423	110402087	664	True	817.000000	817	88.777000	3789	4475	1	chr3D.!!$R1	686
32	TraesCS3A01G467800	chr3D	565393173	565393844	671	True	726.000000	726	86.311000	3789	4472	1	chr3D.!!$R2	683
33	TraesCS3A01G467800	chr3D	566131278	566132745	1467	True	376.000000	691	83.012667	1635	3045	3	chr3D.!!$R5	1410
34	TraesCS3A01G467800	chr3D	566299463	566302059	2596	True	358.250000	547	84.169500	867	3642	4	chr3D.!!$R6	2775
35	TraesCS3A01G467800	chr3D	566421913	566423930	2017	True	326.400000	708	88.819667	801	3673	3	chr3D.!!$R8	2872
36	TraesCS3A01G467800	chr3D	566391799	566394260	2461	True	202.700000	379	84.741333	1528	3746	3	chr3D.!!$R7	2218

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Hairpin	End Stability	Orientation
893	953	0.108585	CATACCCATCACCTTCCCCG	59.891	60.000	0.00	5.73	F
2274	6165	0.887247	TGTGGGTGTATGTGCAATGC	59.113	50.000	0.00	3.56	F
2996	7701	1.202976	AGAGATTTGTTGGCACAGGCT	60.203	47.619	42.39	4.58	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
2802	7480	1.440938	AACAGTTTTACCGCTGCGCA	61.441	50.000	18.00	10.98	36.26	6.09	R
3451	10337	0.389948	AAGAACGAAGCCAGTAGCCG	60.390	55.000	0.00	0.00	45.47	5.52	R
4119	11093	1.404035	CTGCTGCTCATGCTTGCATTA	59.596	47.619	5.24	0.00	43.56	1.90	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Show entries

Search:

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
41	42	5.362263	GTTGTGTCCCACTACTCAGTTTTA	58.638	41.667	2.43	0.00	37.20	1.52
124	125	3.126343	GCCATCGTTCCGTTAGATGTTTT	59.874	43.478	4.33	0.00	39.89	2.43
256	257	3.579302	TGGCCCCACTTGTCAGGG	61.579	66.667	0.00	0.00	45.04	4.45
453	454	3.263261	TGAACACGTGTCTAACAAAGCA	58.737	40.909	23.61	6.39	0.00	3.91
469	470	4.883006	ACAAAGCAATGGCATTTTTGAGTT	59.117	33.333	29.99	14.64	44.61	3.01
477	478	5.793026	TGGCATTTTTGAGTTGTTGAAAC	57.207	34.783	0.00	0.00	0.00	2.78
505	506	2.375174	TGGCAAAACTGAGTAGTGGGAT	59.625	45.455	0.00	0.00	37.19	3.85
538	539	7.913674	TGGCATAAATGATAAAAACCCAAAC	57.086	32.000	0.00	0.00	0.00	2.93
546	547	8.725405	AATGATAAAAACCCAAACGAAAAAGT	57.275	26.923	0.00	0.00	0.00	2.66
547	548	7.758613	TGATAAAAACCCAAACGAAAAAGTC	57.241	32.000	0.00	0.00	0.00	3.01
548	549	7.321153	TGATAAAAACCCAAACGAAAAAGTCA	58.679	30.769	0.00	0.00	0.00	3.41
549	550	7.489757	TGATAAAAACCCAAACGAAAAAGTCAG	59.510	33.333	0.00	0.00	0.00	3.51
550	551	3.793797	AACCCAAACGAAAAAGTCAGG	57.206	42.857	0.00	0.00	0.00	3.86
551	552	2.730382	ACCCAAACGAAAAAGTCAGGT	58.270	42.857	0.00	0.00	0.00	4.00
552	553	3.093814	ACCCAAACGAAAAAGTCAGGTT	58.906	40.909	0.00	0.00	0.00	3.50
553	554	4.271661	ACCCAAACGAAAAAGTCAGGTTA	58.728	39.130	0.00	0.00	0.00	2.85
554	555	4.891168	ACCCAAACGAAAAAGTCAGGTTAT	59.109	37.500	0.00	0.00	0.00	1.89
555	556	5.219633	CCCAAACGAAAAAGTCAGGTTATG	58.780	41.667	0.00	0.00	0.00	1.90
556	557	5.221165	CCCAAACGAAAAAGTCAGGTTATGT	60.221	40.000	0.00	0.00	0.00	2.29
557	558	6.016943	CCCAAACGAAAAAGTCAGGTTATGTA	60.017	38.462	0.00	0.00	0.00	2.29
558	559	7.075741	CCAAACGAAAAAGTCAGGTTATGTAG	58.924	38.462	0.00	0.00	0.00	2.74
559	560	5.857822	ACGAAAAAGTCAGGTTATGTAGC	57.142	39.130	0.00	0.00	0.00	3.58
560	561	5.548406	ACGAAAAAGTCAGGTTATGTAGCT	58.452	37.500	0.00	0.00	34.10	3.32
561	562	6.694447	ACGAAAAAGTCAGGTTATGTAGCTA	58.306	36.000	0.00	0.00	32.12	3.32
562	563	7.156673	ACGAAAAAGTCAGGTTATGTAGCTAA	58.843	34.615	0.00	0.00	32.12	3.09

Showing 1 to 25 of 173 entries

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Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
6	7	2.928116	GGGACACAACGAGTAATGCTAC	59.072	50.000	0.00	0.00	0.00	3.58
7	8	2.563620	TGGGACACAACGAGTAATGCTA	59.436	45.455	0.00	0.00	0.00	3.49
8	9	1.346395	TGGGACACAACGAGTAATGCT	59.654	47.619	0.00	0.00	0.00	3.79
9	10	1.803334	TGGGACACAACGAGTAATGC	58.197	50.000	0.00	0.00	0.00	3.56
41	42	9.841295	TTTTGAGTAGTTGTAACTTCTAATGGT	57.159	29.630	2.20	0.00	36.88	3.55
124	125	5.647658	ACGATGTCTAATGGCATTTTTGAGA	59.352	36.000	19.21	11.95	0.00	3.27
195	196	3.764434	GAGAACTGACATGTGGGTCTAGA	59.236	47.826	13.80	0.00	38.61	2.43
453	454	6.598850	AGTTTCAACAACTCAAAAATGCCATT	59.401	30.769	0.00	0.00	0.00	3.16
469	470	3.569194	TTGCCACTAGGAGTTTCAACA	57.431	42.857	0.00	0.00	36.89	3.33
477	478	3.409026	ACTCAGTTTTGCCACTAGGAG	57.591	47.619	0.00	0.00	36.89	3.69
538	539	7.591006	TTAGCTACATAACCTGACTTTTTCG	57.409	36.000	0.00	0.00	0.00	3.46
545	546	7.900782	TTTCAGTTTAGCTACATAACCTGAC	57.099	36.000	0.00	0.00	0.00	3.51
546	547	8.318412	TCATTTCAGTTTAGCTACATAACCTGA	58.682	33.333	0.00	0.00	0.00	3.86
547	548	8.492673	TCATTTCAGTTTAGCTACATAACCTG	57.507	34.615	0.00	0.00	0.00	4.00
548	549	9.515226	TTTCATTTCAGTTTAGCTACATAACCT	57.485	29.630	0.00	0.00	0.00	3.50
553	554	7.807907	CGGTTTTTCATTTCAGTTTAGCTACAT	59.192	33.333	0.00	0.00	0.00	2.29
554	555	7.136119	CGGTTTTTCATTTCAGTTTAGCTACA	58.864	34.615	0.00	0.00	0.00	2.74
555	556	6.087687	GCGGTTTTTCATTTCAGTTTAGCTAC	59.912	38.462	0.00	0.00	0.00	3.58
556	557	6.146898	GCGGTTTTTCATTTCAGTTTAGCTA	58.853	36.000	0.00	0.00	0.00	3.32
557	558	4.982295	GCGGTTTTTCATTTCAGTTTAGCT	59.018	37.500	0.00	0.00	0.00	3.32
558	559	4.149922	GGCGGTTTTTCATTTCAGTTTAGC	59.850	41.667	0.00	0.00	0.00	3.09
559	560	5.402270	CAGGCGGTTTTTCATTTCAGTTTAG	59.598	40.000	0.00	0.00	0.00	1.85
560	561	5.285651	CAGGCGGTTTTTCATTTCAGTTTA	58.714	37.500	0.00	0.00	0.00	2.01
561	562	4.119136	CAGGCGGTTTTTCATTTCAGTTT	58.881	39.130	0.00	0.00	0.00	2.66
562	563	3.716601	CAGGCGGTTTTTCATTTCAGTT	58.283	40.909	0.00	0.00	0.00	3.16

Showing 1 to 25 of 173 entries

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Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.