Multiple sequence alignment - TraesCS3A01G467400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G467400 chr3A 100.000 3254 0 0 1 3254 700738165 700741418 0.000000e+00 6010.0
1 TraesCS3A01G467400 chr3A 76.157 1145 239 28 1128 2252 655570617 655569487 3.640000e-159 571.0
2 TraesCS3A01G467400 chr3A 92.264 349 27 0 1136 1484 700444801 700444453 2.260000e-136 496.0
3 TraesCS3A01G467400 chr3A 75.000 1156 192 55 1122 2245 702407877 702406787 8.280000e-121 444.0
4 TraesCS3A01G467400 chr3A 76.877 506 91 17 1126 1624 699982429 699982915 2.490000e-66 263.0
5 TraesCS3A01G467400 chr3A 75.744 437 92 13 1818 2247 700209769 700209340 1.180000e-49 207.0
6 TraesCS3A01G467400 chr3A 76.238 202 40 7 2360 2556 701440612 701440810 2.070000e-17 100.0
7 TraesCS3A01G467400 chr3D 89.151 1272 99 13 1126 2371 568819204 568817946 0.000000e+00 1548.0
8 TraesCS3A01G467400 chr3D 89.831 590 55 2 1766 2350 567064754 567064165 0.000000e+00 752.0
9 TraesCS3A01G467400 chr3D 88.871 611 20 12 894 1491 567065337 567064762 0.000000e+00 708.0
10 TraesCS3A01G467400 chr3D 78.763 1116 167 35 1256 2335 566911664 566910583 0.000000e+00 684.0
11 TraesCS3A01G467400 chr3D 74.357 1127 235 39 1145 2252 520595042 520596133 6.450000e-117 431.0
12 TraesCS3A01G467400 chr3D 92.364 275 19 2 120 393 566913944 566913671 1.090000e-104 390.0
13 TraesCS3A01G467400 chr3D 84.018 438 35 16 449 854 566912384 566911950 3.940000e-104 388.0
14 TraesCS3A01G467400 chr3D 91.273 275 18 4 717 990 569791645 569791914 1.430000e-98 370.0
15 TraesCS3A01G467400 chr3D 77.675 542 81 26 2371 2889 567048892 567048368 8.830000e-76 294.0
16 TraesCS3A01G467400 chr3D 94.161 137 5 2 115 249 568820407 568820272 4.260000e-49 206.0
17 TraesCS3A01G467400 chr3D 73.420 617 133 20 1652 2251 579582228 579581626 5.510000e-48 202.0
18 TraesCS3A01G467400 chr3D 84.772 197 30 0 1122 1318 565830752 565830948 7.120000e-47 198.0
19 TraesCS3A01G467400 chr3D 74.495 545 76 29 2366 2889 566909989 566909487 9.280000e-41 178.0
20 TraesCS3A01G467400 chr3D 76.524 328 54 11 2363 2677 567063757 567063440 1.210000e-34 158.0
21 TraesCS3A01G467400 chr3D 94.382 89 5 0 1 89 566914024 566913936 1.570000e-28 137.0
22 TraesCS3A01G467400 chr3D 78.261 207 36 7 2360 2561 566802053 566802255 1.230000e-24 124.0
23 TraesCS3A01G467400 chr3D 86.538 104 12 2 2363 2465 567518848 567518950 2.650000e-21 113.0
24 TraesCS3A01G467400 chr3D 90.000 80 6 2 717 795 567065426 567065348 5.740000e-18 102.0
25 TraesCS3A01G467400 chr3D 84.615 104 14 2 2363 2465 569117662 569117560 5.740000e-18 102.0
26 TraesCS3A01G467400 chr3D 88.889 45 5 0 1515 1559 562465762 562465718 4.540000e-04 56.5
27 TraesCS3A01G467400 chr3B 79.277 1245 206 27 1121 2335 756105919 756104697 0.000000e+00 822.0
28 TraesCS3A01G467400 chr3B 75.838 1134 246 20 1136 2252 684513981 684512859 4.750000e-153 551.0
29 TraesCS3A01G467400 chr3B 75.022 1113 235 28 1146 2244 685471611 685472694 2.940000e-130 475.0
30 TraesCS3A01G467400 chr3B 93.333 60 3 1 2705 2764 538268489 538268431 1.610000e-13 87.9
31 TraesCS3A01G467400 chr3B 96.970 33 1 0 1517 1549 754330718 754330750 4.540000e-04 56.5
32 TraesCS3A01G467400 chrUn 79.194 1240 201 30 1126 2335 286487348 286488560 0.000000e+00 808.0
33 TraesCS3A01G467400 chrUn 79.194 1240 201 30 1126 2335 293133093 293134305 0.000000e+00 808.0
34 TraesCS3A01G467400 chrUn 73.227 1001 184 45 1257 2233 41197522 41196582 1.480000e-73 287.0
35 TraesCS3A01G467400 chrUn 75.654 497 103 14 1865 2349 41057780 41058270 7.020000e-57 231.0
36 TraesCS3A01G467400 chrUn 77.889 199 35 7 2368 2561 41195892 41195698 7.380000e-22 115.0
37 TraesCS3A01G467400 chrUn 92.982 57 3 1 2705 2761 432363357 432363412 7.480000e-12 82.4
38 TraesCS3A01G467400 chrUn 92.982 57 3 1 2705 2761 459692892 459692947 7.480000e-12 82.4
39 TraesCS3A01G467400 chrUn 95.556 45 2 0 2601 2645 240129247 240129291 4.500000e-09 73.1
40 TraesCS3A01G467400 chrUn 95.556 45 2 0 2601 2645 264585508 264585464 4.500000e-09 73.1
41 TraesCS3A01G467400 chrUn 95.556 45 2 0 2601 2645 473060766 473060810 4.500000e-09 73.1
42 TraesCS3A01G467400 chrUn 94.444 36 0 1 2698 2733 240129285 240129318 2.000000e-03 54.7
43 TraesCS3A01G467400 chr7D 75.397 504 104 15 1757 2247 41601215 41600719 3.270000e-55 226.0
44 TraesCS3A01G467400 chr6D 85.577 104 13 2 2363 2465 451116408 451116306 1.230000e-19 108.0
45 TraesCS3A01G467400 chr6B 85.577 104 13 2 2363 2465 685204555 685204453 1.230000e-19 108.0
46 TraesCS3A01G467400 chr6B 95.556 45 2 0 2601 2645 40923282 40923326 4.500000e-09 73.1
47 TraesCS3A01G467400 chr6B 95.556 45 2 0 2601 2645 236310512 236310556 4.500000e-09 73.1
48 TraesCS3A01G467400 chr6B 95.556 45 2 0 2601 2645 262980976 262980932 4.500000e-09 73.1
49 TraesCS3A01G467400 chr6A 84.112 107 12 4 2363 2465 596773515 596773410 7.430000e-17 99.0
50 TraesCS3A01G467400 chr7B 95.000 60 2 1 2705 2764 125371265 125371207 3.460000e-15 93.5
51 TraesCS3A01G467400 chr1B 94.737 57 2 1 2705 2761 168051182 168051237 1.610000e-13 87.9
52 TraesCS3A01G467400 chr1B 94.737 57 2 1 2705 2761 590554563 590554618 1.610000e-13 87.9
53 TraesCS3A01G467400 chr1B 92.982 57 3 1 2705 2761 30948069 30948124 7.480000e-12 82.4
54 TraesCS3A01G467400 chr5B 95.556 45 2 0 2601 2645 67402065 67402021 4.500000e-09 73.1
55 TraesCS3A01G467400 chr4B 95.556 45 2 0 2601 2645 517725787 517725743 4.500000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G467400 chr3A 700738165 700741418 3253 False 6010.0 6010 100.0000 1 3254 1 chr3A.!!$F2 3253
1 TraesCS3A01G467400 chr3A 655569487 655570617 1130 True 571.0 571 76.1570 1128 2252 1 chr3A.!!$R1 1124
2 TraesCS3A01G467400 chr3A 702406787 702407877 1090 True 444.0 444 75.0000 1122 2245 1 chr3A.!!$R4 1123
3 TraesCS3A01G467400 chr3D 568817946 568820407 2461 True 877.0 1548 91.6560 115 2371 2 chr3D.!!$R7 2256
4 TraesCS3A01G467400 chr3D 520595042 520596133 1091 False 431.0 431 74.3570 1145 2252 1 chr3D.!!$F1 1107
5 TraesCS3A01G467400 chr3D 567063440 567065426 1986 True 430.0 752 86.3065 717 2677 4 chr3D.!!$R6 1960
6 TraesCS3A01G467400 chr3D 566909487 566914024 4537 True 355.4 684 84.8044 1 2889 5 chr3D.!!$R5 2888
7 TraesCS3A01G467400 chr3D 567048368 567048892 524 True 294.0 294 77.6750 2371 2889 1 chr3D.!!$R2 518
8 TraesCS3A01G467400 chr3D 579581626 579582228 602 True 202.0 202 73.4200 1652 2251 1 chr3D.!!$R4 599
9 TraesCS3A01G467400 chr3B 756104697 756105919 1222 True 822.0 822 79.2770 1121 2335 1 chr3B.!!$R3 1214
10 TraesCS3A01G467400 chr3B 684512859 684513981 1122 True 551.0 551 75.8380 1136 2252 1 chr3B.!!$R2 1116
11 TraesCS3A01G467400 chr3B 685471611 685472694 1083 False 475.0 475 75.0220 1146 2244 1 chr3B.!!$F1 1098
12 TraesCS3A01G467400 chrUn 286487348 286488560 1212 False 808.0 808 79.1940 1126 2335 1 chrUn.!!$F2 1209
13 TraesCS3A01G467400 chrUn 293133093 293134305 1212 False 808.0 808 79.1940 1126 2335 1 chrUn.!!$F3 1209
14 TraesCS3A01G467400 chrUn 41195698 41197522 1824 True 201.0 287 75.5580 1257 2561 2 chrUn.!!$R2 1304

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
604 1938 0.108520 ACACACGTGGAGTCGTTGTT 60.109 50.0 21.57 0.0 42.27 2.83 F
1832 3442 0.389948 ATTGCTGAGTCGTTCCGGTC 60.390 55.0 0.00 0.0 0.00 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2055 3668 0.107993 CGAGCACATCACTGTCCCAT 60.108 55.0 0.0 0.0 31.62 4.00 R
2822 5073 0.029700 GTAACCCCACAAACGCACAC 59.970 55.0 0.0 0.0 0.00 3.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 68 7.120789 ACAAAGTTGTCAAAAGAAAGCAAAG 57.879 32.000 0.00 0.00 36.50 2.77
83 84 4.461992 GCAAAGAGCTACGTACAAAACA 57.538 40.909 0.00 0.00 41.15 2.83
84 85 5.030874 GCAAAGAGCTACGTACAAAACAT 57.969 39.130 0.00 0.00 41.15 2.71
85 86 5.449304 GCAAAGAGCTACGTACAAAACATT 58.551 37.500 0.00 0.00 41.15 2.71
86 87 5.912955 GCAAAGAGCTACGTACAAAACATTT 59.087 36.000 0.00 0.00 41.15 2.32
87 88 6.416750 GCAAAGAGCTACGTACAAAACATTTT 59.583 34.615 0.00 0.00 41.15 1.82
88 89 7.588488 GCAAAGAGCTACGTACAAAACATTTTA 59.412 33.333 0.00 0.00 41.15 1.52
89 90 9.103048 CAAAGAGCTACGTACAAAACATTTTAG 57.897 33.333 0.00 0.00 0.00 1.85
90 91 6.828672 AGAGCTACGTACAAAACATTTTAGC 58.171 36.000 0.00 0.00 0.00 3.09
91 92 6.649557 AGAGCTACGTACAAAACATTTTAGCT 59.350 34.615 8.74 8.74 37.33 3.32
92 93 7.816031 AGAGCTACGTACAAAACATTTTAGCTA 59.184 33.333 8.90 0.00 35.76 3.32
93 94 8.488651 AGCTACGTACAAAACATTTTAGCTAT 57.511 30.769 7.64 0.00 34.59 2.97
94 95 8.943002 AGCTACGTACAAAACATTTTAGCTATT 58.057 29.630 7.64 0.00 34.59 1.73
95 96 8.995906 GCTACGTACAAAACATTTTAGCTATTG 58.004 33.333 0.00 0.00 0.00 1.90
97 98 8.944212 ACGTACAAAACATTTTAGCTATTGAC 57.056 30.769 7.75 2.49 0.00 3.18
98 99 8.561212 ACGTACAAAACATTTTAGCTATTGACA 58.439 29.630 7.75 0.00 0.00 3.58
99 100 9.554724 CGTACAAAACATTTTAGCTATTGACAT 57.445 29.630 7.75 0.00 0.00 3.06
108 109 9.903682 CATTTTAGCTATTGACATATCTTTGGG 57.096 33.333 0.00 0.00 0.00 4.12
109 110 9.646522 ATTTTAGCTATTGACATATCTTTGGGT 57.353 29.630 0.00 0.00 0.00 4.51
110 111 9.474313 TTTTAGCTATTGACATATCTTTGGGTT 57.526 29.630 0.00 0.00 0.00 4.11
111 112 9.474313 TTTAGCTATTGACATATCTTTGGGTTT 57.526 29.630 0.00 0.00 0.00 3.27
112 113 7.961326 AGCTATTGACATATCTTTGGGTTTT 57.039 32.000 0.00 0.00 0.00 2.43
113 114 8.366359 AGCTATTGACATATCTTTGGGTTTTT 57.634 30.769 0.00 0.00 0.00 1.94
343 347 0.541863 AGGTGTCGATCATCCAACCC 59.458 55.000 0.00 0.00 0.00 4.11
345 349 1.760613 GGTGTCGATCATCCAACCCTA 59.239 52.381 0.00 0.00 0.00 3.53
348 352 3.132289 GTGTCGATCATCCAACCCTAAGA 59.868 47.826 0.00 0.00 0.00 2.10
356 360 4.721776 TCATCCAACCCTAAGATAGCAGTT 59.278 41.667 0.00 0.00 0.00 3.16
394 398 5.582689 GGCACTAACAAAGCCTCATAATT 57.417 39.130 0.00 0.00 44.92 1.40
395 399 6.693315 GGCACTAACAAAGCCTCATAATTA 57.307 37.500 0.00 0.00 44.92 1.40
396 400 7.095695 GGCACTAACAAAGCCTCATAATTAA 57.904 36.000 0.00 0.00 44.92 1.40
397 401 7.196331 GGCACTAACAAAGCCTCATAATTAAG 58.804 38.462 0.00 0.00 44.92 1.85
398 402 7.196331 GCACTAACAAAGCCTCATAATTAAGG 58.804 38.462 0.00 0.00 35.65 2.69
399 403 7.682021 GCACTAACAAAGCCTCATAATTAAGGG 60.682 40.741 5.54 2.36 32.98 3.95
400 404 7.556275 CACTAACAAAGCCTCATAATTAAGGGA 59.444 37.037 5.54 0.00 32.98 4.20
401 405 8.113462 ACTAACAAAGCCTCATAATTAAGGGAA 58.887 33.333 5.54 0.00 32.98 3.97
402 406 7.410120 AACAAAGCCTCATAATTAAGGGAAG 57.590 36.000 5.54 0.00 32.98 3.46
403 407 5.893824 ACAAAGCCTCATAATTAAGGGAAGG 59.106 40.000 5.54 0.00 32.98 3.46
404 408 4.731313 AGCCTCATAATTAAGGGAAGGG 57.269 45.455 5.54 0.00 32.98 3.95
407 411 3.140144 CCTCATAATTAAGGGAAGGGGCA 59.860 47.826 0.00 0.00 0.00 5.36
409 413 2.721425 TAATTAAGGGAAGGGGCACG 57.279 50.000 0.00 0.00 0.00 5.34
441 517 7.936847 TCTTTGTGTGACCTATTTCTATTGTGT 59.063 33.333 0.00 0.00 0.00 3.72
502 1832 5.431179 TTGTAAGAAATGTCTACCCCCTC 57.569 43.478 0.00 0.00 32.16 4.30
506 1836 0.426022 AAATGTCTACCCCCTCCCCT 59.574 55.000 0.00 0.00 0.00 4.79
524 1854 4.290985 TCCCCTGTGTGAAATCCTAAATCA 59.709 41.667 0.00 0.00 0.00 2.57
538 1868 0.896940 AAATCAGCCACTGCCCACTG 60.897 55.000 0.00 0.00 38.69 3.66
598 1929 0.582005 GAAGCAACACACGTGGAGTC 59.418 55.000 21.57 7.19 34.19 3.36
604 1938 0.108520 ACACACGTGGAGTCGTTGTT 60.109 50.000 21.57 0.00 42.27 2.83
613 1947 1.078072 AGTCGTTGTTGGTGTGGCA 60.078 52.632 0.00 0.00 0.00 4.92
614 1948 1.063488 GTCGTTGTTGGTGTGGCAC 59.937 57.895 11.55 11.55 0.00 5.01
658 1995 3.130160 GCTACCCGTCGTCCGTCT 61.130 66.667 0.00 0.00 33.66 4.18
659 1996 2.694760 GCTACCCGTCGTCCGTCTT 61.695 63.158 0.00 0.00 33.66 3.01
683 2021 0.670239 TGGCTATGCACACAGACACG 60.670 55.000 0.00 0.00 0.00 4.49
684 2022 1.361668 GGCTATGCACACAGACACGG 61.362 60.000 0.00 0.00 0.00 4.94
687 2025 0.394938 TATGCACACAGACACGGGTT 59.605 50.000 0.00 0.00 0.00 4.11
688 2026 0.394938 ATGCACACAGACACGGGTTA 59.605 50.000 0.00 0.00 0.00 2.85
694 2032 1.295423 CAGACACGGGTTACTGGGG 59.705 63.158 0.00 0.00 0.00 4.96
713 2051 1.303309 GATGAACTCCGCTTCCATGG 58.697 55.000 4.97 4.97 0.00 3.66
714 2052 0.911769 ATGAACTCCGCTTCCATGGA 59.088 50.000 11.44 11.44 0.00 3.41
720 2081 2.094675 CTCCGCTTCCATGGATTGTTT 58.905 47.619 17.06 0.00 32.83 2.83
723 2084 2.159338 CCGCTTCCATGGATTGTTTCAG 60.159 50.000 17.06 9.19 0.00 3.02
744 2105 5.073554 TCAGAAGGGACCATGCATACAATAT 59.926 40.000 0.00 0.00 0.00 1.28
790 2154 2.186076 GAATCTCTGCAACGTAGACCG 58.814 52.381 0.00 0.00 44.03 4.79
832 2197 6.402118 CGATGGTTGATATCACGTTTCAGTTT 60.402 38.462 4.48 0.00 0.00 2.66
840 2205 9.226606 TGATATCACGTTTCAGTTTAAGGATTT 57.773 29.630 0.00 0.00 0.00 2.17
877 2356 3.826729 GCAAGATAAGTTTGACAACCCCT 59.173 43.478 0.00 0.00 32.70 4.79
878 2357 4.082733 GCAAGATAAGTTTGACAACCCCTC 60.083 45.833 0.00 0.00 32.70 4.30
897 2378 1.772453 TCGGTGAGAGGAAGGGTTTTT 59.228 47.619 0.00 0.00 0.00 1.94
920 2401 3.526931 TTCGAGCATAGAGGTTTCTGG 57.473 47.619 0.00 0.00 34.79 3.86
980 2497 1.359848 CCGGTTTCATCTCAACGAGG 58.640 55.000 0.00 0.00 0.00 4.63
1074 2595 4.367023 GCCGCCGTCACTACCACA 62.367 66.667 0.00 0.00 0.00 4.17
1075 2596 2.431942 CCGCCGTCACTACCACAC 60.432 66.667 0.00 0.00 0.00 3.82
1076 2597 2.337170 CGCCGTCACTACCACACA 59.663 61.111 0.00 0.00 0.00 3.72
1077 2598 2.019951 CGCCGTCACTACCACACAC 61.020 63.158 0.00 0.00 0.00 3.82
1078 2599 1.068417 GCCGTCACTACCACACACA 59.932 57.895 0.00 0.00 0.00 3.72
1388 2943 2.436115 GGACAACGTAGCAGGGGC 60.436 66.667 0.00 0.00 41.61 5.80
1513 3080 1.515088 CTCTACAGCACGCACTCCG 60.515 63.158 0.00 0.00 44.21 4.63
1558 3125 2.370445 GCTCCCCTCCAGCAGCTTA 61.370 63.158 0.00 0.00 36.82 3.09
1677 3265 4.070552 GGCGCCCACGTCTTCTCT 62.071 66.667 18.11 0.00 41.84 3.10
1720 3314 4.471078 AGGTACATAGGGTGCTCTGATA 57.529 45.455 0.00 0.00 32.05 2.15
1722 3316 3.895656 GGTACATAGGGTGCTCTGATACA 59.104 47.826 0.00 0.00 32.05 2.29
1723 3323 4.262079 GGTACATAGGGTGCTCTGATACAC 60.262 50.000 0.00 3.14 36.03 2.90
1790 3394 1.401552 CCTGCATTGGTACATGAACCG 59.598 52.381 0.00 0.00 42.91 4.44
1794 3404 2.159254 GCATTGGTACATGAACCGCATT 60.159 45.455 0.00 0.00 42.91 3.56
1795 3405 3.437428 CATTGGTACATGAACCGCATTG 58.563 45.455 0.00 0.00 42.91 2.82
1832 3442 0.389948 ATTGCTGAGTCGTTCCGGTC 60.390 55.000 0.00 0.00 0.00 4.79
1851 3461 1.335496 TCGATGCGATGTCCGATTGTA 59.665 47.619 0.00 0.00 41.76 2.41
1862 3475 1.013596 CCGATTGTAATTGGCTGCGA 58.986 50.000 0.00 0.00 33.35 5.10
1863 3476 1.003545 CCGATTGTAATTGGCTGCGAG 60.004 52.381 0.00 0.00 33.35 5.03
1908 3521 3.253188 TGCTTGGCATGTTTAGTCTCAAC 59.747 43.478 2.12 0.00 31.71 3.18
1989 3602 4.256110 CCTTAAAGTACCGGGTCGAATTT 58.744 43.478 6.32 1.40 0.00 1.82
2062 3678 1.346068 TGATTGTCACGTCATGGGACA 59.654 47.619 0.00 0.00 44.54 4.02
2302 3923 0.179020 CTGAGGGTTGTTGGCTGTGA 60.179 55.000 0.00 0.00 0.00 3.58
2350 3974 0.723414 CCACGTCAGCTGCAGTATTG 59.277 55.000 16.64 11.67 0.00 1.90
2368 3997 3.485463 TTGAGGGTCAGTTCGTTTCAT 57.515 42.857 0.00 0.00 0.00 2.57
2371 4000 3.071023 TGAGGGTCAGTTCGTTTCATCTT 59.929 43.478 0.00 0.00 0.00 2.40
2372 4001 4.065789 GAGGGTCAGTTCGTTTCATCTTT 58.934 43.478 0.00 0.00 0.00 2.52
2373 4002 4.461198 AGGGTCAGTTCGTTTCATCTTTT 58.539 39.130 0.00 0.00 0.00 2.27
2375 4004 4.537015 GGTCAGTTCGTTTCATCTTTTGG 58.463 43.478 0.00 0.00 0.00 3.28
2418 4657 6.094603 CACTTTAGCTGCTATCCATTTCAAGT 59.905 38.462 10.64 11.09 0.00 3.16
2422 4661 8.752005 TTAGCTGCTATCCATTTCAAGTAATT 57.248 30.769 10.64 0.00 0.00 1.40
2423 4662 7.035840 AGCTGCTATCCATTTCAAGTAATTG 57.964 36.000 0.00 0.00 0.00 2.32
2481 4724 7.750903 GCTTGAGAAAACATGTACTGATAAACC 59.249 37.037 0.00 0.00 0.00 3.27
2514 4757 0.545071 TCATGGTCTGGCTCAGGTCA 60.545 55.000 0.00 2.85 31.51 4.02
2530 4773 0.240945 GTCAAAGATTGTGCACCCCG 59.759 55.000 15.69 0.00 0.00 5.73
2533 4776 0.673437 AAAGATTGTGCACCCCGTTG 59.327 50.000 15.69 0.00 0.00 4.10
2557 4808 3.505680 ACTGCGAGCCATGTTCATTTTTA 59.494 39.130 0.00 0.00 0.00 1.52
2571 4822 7.083858 TGTTCATTTTTATCTGTAAGCAGTGC 58.916 34.615 7.13 7.13 43.05 4.40
2575 4826 6.633500 TTTTTATCTGTAAGCAGTGCAAGT 57.367 33.333 19.20 4.47 43.05 3.16
2579 4830 2.038952 TCTGTAAGCAGTGCAAGTCCAT 59.961 45.455 19.20 0.00 43.05 3.41
2580 4831 2.417933 CTGTAAGCAGTGCAAGTCCATC 59.582 50.000 19.20 0.00 37.92 3.51
2581 4832 2.224499 TGTAAGCAGTGCAAGTCCATCA 60.224 45.455 19.20 2.12 0.00 3.07
2582 4833 2.211250 AAGCAGTGCAAGTCCATCAT 57.789 45.000 19.20 0.00 0.00 2.45
2583 4834 1.460504 AGCAGTGCAAGTCCATCATG 58.539 50.000 19.20 0.00 0.00 3.07
2584 4835 1.003928 AGCAGTGCAAGTCCATCATGA 59.996 47.619 19.20 0.00 0.00 3.07
2585 4836 2.022195 GCAGTGCAAGTCCATCATGAT 58.978 47.619 11.09 1.18 0.00 2.45
2588 4839 3.692593 CAGTGCAAGTCCATCATGATTCA 59.307 43.478 5.16 0.00 0.00 2.57
2603 4854 6.425735 TCATGATTCATGAGTACCATTGGTT 58.574 36.000 22.47 0.00 44.60 3.67
2636 4887 2.206815 CTCAAGCAGGAGATCACGAG 57.793 55.000 0.00 0.00 37.05 4.18
2637 4888 0.820226 TCAAGCAGGAGATCACGAGG 59.180 55.000 0.00 0.00 0.00 4.63
2638 4889 0.820226 CAAGCAGGAGATCACGAGGA 59.180 55.000 0.00 0.00 0.00 3.71
2639 4890 1.205655 CAAGCAGGAGATCACGAGGAA 59.794 52.381 0.00 0.00 0.00 3.36
2640 4891 1.786937 AGCAGGAGATCACGAGGAAT 58.213 50.000 0.00 0.00 0.00 3.01
2641 4892 2.114616 AGCAGGAGATCACGAGGAATT 58.885 47.619 0.00 0.00 0.00 2.17
2642 4893 2.158986 AGCAGGAGATCACGAGGAATTG 60.159 50.000 0.00 0.00 0.00 2.32
2643 4894 2.419297 GCAGGAGATCACGAGGAATTGT 60.419 50.000 0.00 0.00 0.00 2.71
2644 4895 3.193263 CAGGAGATCACGAGGAATTGTG 58.807 50.000 0.00 0.00 37.44 3.33
2645 4896 2.834549 AGGAGATCACGAGGAATTGTGT 59.165 45.455 0.00 0.00 37.38 3.72
2646 4897 2.932614 GGAGATCACGAGGAATTGTGTG 59.067 50.000 0.00 0.00 37.38 3.82
2647 4898 3.589988 GAGATCACGAGGAATTGTGTGT 58.410 45.455 0.00 0.00 37.38 3.72
2648 4899 3.589988 AGATCACGAGGAATTGTGTGTC 58.410 45.455 0.00 0.00 37.38 3.67
2649 4900 2.900716 TCACGAGGAATTGTGTGTCA 57.099 45.000 0.00 0.00 37.38 3.58
2650 4901 3.186702 TCACGAGGAATTGTGTGTCAA 57.813 42.857 0.00 0.00 40.53 3.18
2651 4902 3.130633 TCACGAGGAATTGTGTGTCAAG 58.869 45.455 0.00 0.00 39.55 3.02
2652 4903 1.873591 ACGAGGAATTGTGTGTCAAGC 59.126 47.619 0.00 0.00 39.55 4.01
2653 4904 1.872952 CGAGGAATTGTGTGTCAAGCA 59.127 47.619 0.00 0.00 39.55 3.91
2654 4905 2.096069 CGAGGAATTGTGTGTCAAGCAG 60.096 50.000 0.00 0.00 39.55 4.24
2655 4906 3.141398 GAGGAATTGTGTGTCAAGCAGA 58.859 45.455 0.00 0.00 39.55 4.26
2656 4907 3.755378 GAGGAATTGTGTGTCAAGCAGAT 59.245 43.478 0.00 0.00 39.55 2.90
2657 4908 4.147321 AGGAATTGTGTGTCAAGCAGATT 58.853 39.130 0.00 0.00 39.55 2.40
2658 4909 4.022589 AGGAATTGTGTGTCAAGCAGATTG 60.023 41.667 0.00 0.00 39.55 2.67
2659 4910 4.261741 GGAATTGTGTGTCAAGCAGATTGT 60.262 41.667 0.00 0.00 40.05 2.71
2660 4911 3.696281 TTGTGTGTCAAGCAGATTGTG 57.304 42.857 0.00 0.00 40.05 3.33
2670 4921 2.187073 CAGATTGTGCCAAGCTCCC 58.813 57.895 3.16 0.00 0.00 4.30
2671 4922 0.323178 CAGATTGTGCCAAGCTCCCT 60.323 55.000 3.16 0.00 0.00 4.20
2672 4923 0.034670 AGATTGTGCCAAGCTCCCTC 60.035 55.000 0.58 0.00 0.00 4.30
2673 4924 1.000396 ATTGTGCCAAGCTCCCTCC 60.000 57.895 0.00 0.00 0.00 4.30
2674 4925 1.792757 ATTGTGCCAAGCTCCCTCCA 61.793 55.000 0.00 0.00 0.00 3.86
2675 4926 2.005606 TTGTGCCAAGCTCCCTCCAA 62.006 55.000 0.00 0.00 0.00 3.53
2676 4927 1.000396 GTGCCAAGCTCCCTCCAAT 60.000 57.895 0.00 0.00 0.00 3.16
2677 4928 0.613012 GTGCCAAGCTCCCTCCAATT 60.613 55.000 0.00 0.00 0.00 2.32
2678 4929 0.998928 TGCCAAGCTCCCTCCAATTA 59.001 50.000 0.00 0.00 0.00 1.40
2679 4930 1.340991 TGCCAAGCTCCCTCCAATTAC 60.341 52.381 0.00 0.00 0.00 1.89
2680 4931 1.064389 GCCAAGCTCCCTCCAATTACT 60.064 52.381 0.00 0.00 0.00 2.24
2681 4932 2.172717 GCCAAGCTCCCTCCAATTACTA 59.827 50.000 0.00 0.00 0.00 1.82
2682 4933 3.181439 GCCAAGCTCCCTCCAATTACTAT 60.181 47.826 0.00 0.00 0.00 2.12
2683 4934 4.689983 GCCAAGCTCCCTCCAATTACTATT 60.690 45.833 0.00 0.00 0.00 1.73
2684 4935 5.449553 CCAAGCTCCCTCCAATTACTATTT 58.550 41.667 0.00 0.00 0.00 1.40
2685 4936 5.893824 CCAAGCTCCCTCCAATTACTATTTT 59.106 40.000 0.00 0.00 0.00 1.82
2686 4937 6.381133 CCAAGCTCCCTCCAATTACTATTTTT 59.619 38.462 0.00 0.00 0.00 1.94
2705 4956 5.886960 TTTTTGTGGGGTTCAATTGTTTG 57.113 34.783 5.13 0.00 0.00 2.93
2706 4957 2.611225 TGTGGGGTTCAATTGTTTGC 57.389 45.000 5.13 0.00 32.61 3.68
2707 4958 2.114616 TGTGGGGTTCAATTGTTTGCT 58.885 42.857 5.13 0.00 32.61 3.91
2708 4959 2.503356 TGTGGGGTTCAATTGTTTGCTT 59.497 40.909 5.13 0.00 32.61 3.91
2709 4960 3.130633 GTGGGGTTCAATTGTTTGCTTC 58.869 45.455 5.13 0.00 32.61 3.86
2710 4961 3.037549 TGGGGTTCAATTGTTTGCTTCT 58.962 40.909 5.13 0.00 32.61 2.85
2711 4962 3.181467 TGGGGTTCAATTGTTTGCTTCTG 60.181 43.478 5.13 0.00 32.61 3.02
2712 4963 3.392882 GGGTTCAATTGTTTGCTTCTGG 58.607 45.455 5.13 0.00 32.61 3.86
2713 4964 3.069443 GGGTTCAATTGTTTGCTTCTGGA 59.931 43.478 5.13 0.00 32.61 3.86
2714 4965 4.262592 GGGTTCAATTGTTTGCTTCTGGAT 60.263 41.667 5.13 0.00 32.61 3.41
2715 4966 4.687483 GGTTCAATTGTTTGCTTCTGGATG 59.313 41.667 5.13 0.00 32.61 3.51
2716 4967 5.291971 GTTCAATTGTTTGCTTCTGGATGT 58.708 37.500 5.13 0.00 32.61 3.06
2717 4968 6.446318 GTTCAATTGTTTGCTTCTGGATGTA 58.554 36.000 5.13 0.00 32.61 2.29
2718 4969 6.839124 TCAATTGTTTGCTTCTGGATGTAT 57.161 33.333 5.13 0.00 32.61 2.29
2719 4970 7.230849 TCAATTGTTTGCTTCTGGATGTATT 57.769 32.000 5.13 0.00 32.61 1.89
2720 4971 8.347004 TCAATTGTTTGCTTCTGGATGTATTA 57.653 30.769 5.13 0.00 32.61 0.98
2721 4972 8.970020 TCAATTGTTTGCTTCTGGATGTATTAT 58.030 29.630 5.13 0.00 32.61 1.28
2722 4973 9.027129 CAATTGTTTGCTTCTGGATGTATTATG 57.973 33.333 0.00 0.00 0.00 1.90
2723 4974 7.701539 TTGTTTGCTTCTGGATGTATTATGT 57.298 32.000 0.00 0.00 0.00 2.29
2724 4975 7.087409 TGTTTGCTTCTGGATGTATTATGTG 57.913 36.000 0.00 0.00 0.00 3.21
2725 4976 5.756195 TTGCTTCTGGATGTATTATGTGC 57.244 39.130 0.00 0.00 0.00 4.57
2726 4977 4.136796 TGCTTCTGGATGTATTATGTGCC 58.863 43.478 0.00 0.00 0.00 5.01
2727 4978 4.136796 GCTTCTGGATGTATTATGTGCCA 58.863 43.478 0.00 0.00 0.00 4.92
2728 4979 4.763793 GCTTCTGGATGTATTATGTGCCAT 59.236 41.667 0.00 0.00 0.00 4.40
2729 4980 5.242393 GCTTCTGGATGTATTATGTGCCATT 59.758 40.000 0.00 0.00 0.00 3.16
2730 4981 6.638096 TTCTGGATGTATTATGTGCCATTG 57.362 37.500 0.00 0.00 0.00 2.82
2731 4982 5.072055 TCTGGATGTATTATGTGCCATTGG 58.928 41.667 0.00 0.00 0.00 3.16
2732 4983 4.802307 TGGATGTATTATGTGCCATTGGT 58.198 39.130 4.26 0.00 0.00 3.67
2733 4984 4.583907 TGGATGTATTATGTGCCATTGGTG 59.416 41.667 4.26 0.00 0.00 4.17
2734 4985 4.826733 GGATGTATTATGTGCCATTGGTGA 59.173 41.667 4.26 0.00 0.00 4.02
2735 4986 5.477984 GGATGTATTATGTGCCATTGGTGAT 59.522 40.000 4.26 0.00 0.00 3.06
2736 4987 6.015180 GGATGTATTATGTGCCATTGGTGATT 60.015 38.462 4.26 0.00 0.00 2.57
2737 4988 6.146601 TGTATTATGTGCCATTGGTGATTG 57.853 37.500 4.26 0.00 0.00 2.67
2738 4989 3.523606 TTATGTGCCATTGGTGATTGC 57.476 42.857 4.26 0.00 0.00 3.56
2739 4990 1.563924 ATGTGCCATTGGTGATTGCT 58.436 45.000 4.26 0.00 0.00 3.91
2740 4991 0.889994 TGTGCCATTGGTGATTGCTC 59.110 50.000 4.26 0.00 0.00 4.26
2741 4992 0.889994 GTGCCATTGGTGATTGCTCA 59.110 50.000 4.26 0.00 0.00 4.26
2742 4993 1.135199 GTGCCATTGGTGATTGCTCAG 60.135 52.381 4.26 0.00 30.18 3.35
2748 4999 3.086733 GGTGATTGCTCAGCTACCC 57.913 57.895 0.00 0.00 44.67 3.69
2749 5000 0.253044 GGTGATTGCTCAGCTACCCA 59.747 55.000 0.00 0.00 44.67 4.51
2750 5001 1.373570 GTGATTGCTCAGCTACCCAC 58.626 55.000 0.00 0.00 30.18 4.61
2751 5002 0.983467 TGATTGCTCAGCTACCCACA 59.017 50.000 0.00 0.00 0.00 4.17
2752 5003 1.561076 TGATTGCTCAGCTACCCACAT 59.439 47.619 0.00 0.00 0.00 3.21
2753 5004 2.025981 TGATTGCTCAGCTACCCACATT 60.026 45.455 0.00 0.00 0.00 2.71
2754 5005 2.113860 TTGCTCAGCTACCCACATTC 57.886 50.000 0.00 0.00 0.00 2.67
2755 5006 0.983467 TGCTCAGCTACCCACATTCA 59.017 50.000 0.00 0.00 0.00 2.57
2756 5007 1.065926 TGCTCAGCTACCCACATTCAG 60.066 52.381 0.00 0.00 0.00 3.02
2757 5008 1.065854 GCTCAGCTACCCACATTCAGT 60.066 52.381 0.00 0.00 0.00 3.41
2758 5009 2.616510 GCTCAGCTACCCACATTCAGTT 60.617 50.000 0.00 0.00 0.00 3.16
2759 5010 3.679389 CTCAGCTACCCACATTCAGTTT 58.321 45.455 0.00 0.00 0.00 2.66
2760 5011 4.074970 CTCAGCTACCCACATTCAGTTTT 58.925 43.478 0.00 0.00 0.00 2.43
2761 5012 4.469657 TCAGCTACCCACATTCAGTTTTT 58.530 39.130 0.00 0.00 0.00 1.94
2781 5032 4.169102 CAGTATGCGCGTCTGTGT 57.831 55.556 4.79 0.00 0.00 3.72
2782 5033 1.704010 CAGTATGCGCGTCTGTGTG 59.296 57.895 4.79 0.00 0.00 3.82
2783 5034 0.732538 CAGTATGCGCGTCTGTGTGA 60.733 55.000 4.79 0.00 0.00 3.58
2784 5035 0.456824 AGTATGCGCGTCTGTGTGAG 60.457 55.000 4.79 0.00 0.00 3.51
2785 5036 0.732880 GTATGCGCGTCTGTGTGAGT 60.733 55.000 4.79 0.00 0.00 3.41
2786 5037 0.038618 TATGCGCGTCTGTGTGAGTT 60.039 50.000 4.79 0.00 0.00 3.01
2787 5038 0.880278 ATGCGCGTCTGTGTGAGTTT 60.880 50.000 8.43 0.00 0.00 2.66
2788 5039 0.249114 TGCGCGTCTGTGTGAGTTTA 60.249 50.000 8.43 0.00 0.00 2.01
2789 5040 1.068474 GCGCGTCTGTGTGAGTTTAT 58.932 50.000 8.43 0.00 0.00 1.40
2790 5041 1.459592 GCGCGTCTGTGTGAGTTTATT 59.540 47.619 8.43 0.00 0.00 1.40
2791 5042 2.096417 GCGCGTCTGTGTGAGTTTATTT 60.096 45.455 8.43 0.00 0.00 1.40
2792 5043 3.606153 GCGCGTCTGTGTGAGTTTATTTT 60.606 43.478 8.43 0.00 0.00 1.82
2793 5044 4.141680 CGCGTCTGTGTGAGTTTATTTTC 58.858 43.478 0.00 0.00 0.00 2.29
2794 5045 4.464112 GCGTCTGTGTGAGTTTATTTTCC 58.536 43.478 0.00 0.00 0.00 3.13
2795 5046 4.213482 GCGTCTGTGTGAGTTTATTTTCCT 59.787 41.667 0.00 0.00 0.00 3.36
2796 5047 5.679906 CGTCTGTGTGAGTTTATTTTCCTG 58.320 41.667 0.00 0.00 0.00 3.86
2797 5048 5.236478 CGTCTGTGTGAGTTTATTTTCCTGT 59.764 40.000 0.00 0.00 0.00 4.00
2798 5049 6.430451 GTCTGTGTGAGTTTATTTTCCTGTG 58.570 40.000 0.00 0.00 0.00 3.66
2799 5050 6.260050 GTCTGTGTGAGTTTATTTTCCTGTGA 59.740 38.462 0.00 0.00 0.00 3.58
2800 5051 6.998074 TCTGTGTGAGTTTATTTTCCTGTGAT 59.002 34.615 0.00 0.00 0.00 3.06
2801 5052 6.969366 TGTGTGAGTTTATTTTCCTGTGATG 58.031 36.000 0.00 0.00 0.00 3.07
2802 5053 6.770303 TGTGTGAGTTTATTTTCCTGTGATGA 59.230 34.615 0.00 0.00 0.00 2.92
2803 5054 7.284261 TGTGTGAGTTTATTTTCCTGTGATGAA 59.716 33.333 0.00 0.00 0.00 2.57
2804 5055 8.299570 GTGTGAGTTTATTTTCCTGTGATGAAT 58.700 33.333 0.00 0.00 0.00 2.57
2805 5056 8.298854 TGTGAGTTTATTTTCCTGTGATGAATG 58.701 33.333 0.00 0.00 0.00 2.67
2806 5057 8.299570 GTGAGTTTATTTTCCTGTGATGAATGT 58.700 33.333 0.00 0.00 0.00 2.71
2807 5058 9.513906 TGAGTTTATTTTCCTGTGATGAATGTA 57.486 29.630 0.00 0.00 0.00 2.29
2808 5059 9.774742 GAGTTTATTTTCCTGTGATGAATGTAC 57.225 33.333 0.00 0.00 0.00 2.90
2809 5060 9.295825 AGTTTATTTTCCTGTGATGAATGTACA 57.704 29.630 0.00 0.00 0.00 2.90
2814 5065 7.848223 TTTCCTGTGATGAATGTACATACTG 57.152 36.000 9.21 7.14 0.00 2.74
2815 5066 5.917462 TCCTGTGATGAATGTACATACTGG 58.083 41.667 18.61 18.61 32.12 4.00
2816 5067 5.425217 TCCTGTGATGAATGTACATACTGGT 59.575 40.000 21.55 4.56 32.36 4.00
2817 5068 5.525012 CCTGTGATGAATGTACATACTGGTG 59.475 44.000 9.21 0.00 0.00 4.17
2818 5069 6.293004 TGTGATGAATGTACATACTGGTGA 57.707 37.500 9.21 0.00 0.00 4.02
2819 5070 6.706295 TGTGATGAATGTACATACTGGTGAA 58.294 36.000 9.21 0.00 0.00 3.18
2820 5071 7.337938 TGTGATGAATGTACATACTGGTGAAT 58.662 34.615 9.21 0.00 0.00 2.57
2821 5072 7.828717 TGTGATGAATGTACATACTGGTGAATT 59.171 33.333 9.21 0.00 0.00 2.17
2822 5073 8.124823 GTGATGAATGTACATACTGGTGAATTG 58.875 37.037 9.21 0.00 0.00 2.32
2823 5074 7.828717 TGATGAATGTACATACTGGTGAATTGT 59.171 33.333 9.21 0.00 0.00 2.71
2824 5075 7.376435 TGAATGTACATACTGGTGAATTGTG 57.624 36.000 9.21 0.00 0.00 3.33
2825 5076 6.939730 TGAATGTACATACTGGTGAATTGTGT 59.060 34.615 9.21 0.00 0.00 3.72
2826 5077 6.741992 ATGTACATACTGGTGAATTGTGTG 57.258 37.500 6.56 0.00 0.00 3.82
2827 5078 4.454161 TGTACATACTGGTGAATTGTGTGC 59.546 41.667 0.00 0.00 0.00 4.57
2828 5079 2.483877 ACATACTGGTGAATTGTGTGCG 59.516 45.455 0.00 0.00 0.00 5.34
2829 5080 2.248280 TACTGGTGAATTGTGTGCGT 57.752 45.000 0.00 0.00 0.00 5.24
2830 5081 1.388547 ACTGGTGAATTGTGTGCGTT 58.611 45.000 0.00 0.00 0.00 4.84
2831 5082 1.748493 ACTGGTGAATTGTGTGCGTTT 59.252 42.857 0.00 0.00 0.00 3.60
2832 5083 2.118683 CTGGTGAATTGTGTGCGTTTG 58.881 47.619 0.00 0.00 0.00 2.93
2833 5084 1.474478 TGGTGAATTGTGTGCGTTTGT 59.526 42.857 0.00 0.00 0.00 2.83
2834 5085 1.851666 GGTGAATTGTGTGCGTTTGTG 59.148 47.619 0.00 0.00 0.00 3.33
2835 5086 1.851666 GTGAATTGTGTGCGTTTGTGG 59.148 47.619 0.00 0.00 0.00 4.17
2836 5087 1.202348 TGAATTGTGTGCGTTTGTGGG 60.202 47.619 0.00 0.00 0.00 4.61
2837 5088 0.103937 AATTGTGTGCGTTTGTGGGG 59.896 50.000 0.00 0.00 0.00 4.96
2838 5089 1.040339 ATTGTGTGCGTTTGTGGGGT 61.040 50.000 0.00 0.00 0.00 4.95
2839 5090 1.251527 TTGTGTGCGTTTGTGGGGTT 61.252 50.000 0.00 0.00 0.00 4.11
2840 5091 0.393944 TGTGTGCGTTTGTGGGGTTA 60.394 50.000 0.00 0.00 0.00 2.85
2841 5092 0.029700 GTGTGCGTTTGTGGGGTTAC 59.970 55.000 0.00 0.00 0.00 2.50
2842 5093 0.393944 TGTGCGTTTGTGGGGTTACA 60.394 50.000 0.00 0.00 0.00 2.41
2843 5094 0.309612 GTGCGTTTGTGGGGTTACAG 59.690 55.000 0.00 0.00 0.00 2.74
2844 5095 0.107116 TGCGTTTGTGGGGTTACAGT 60.107 50.000 0.00 0.00 0.00 3.55
2845 5096 1.026584 GCGTTTGTGGGGTTACAGTT 58.973 50.000 0.00 0.00 0.00 3.16
2846 5097 1.406180 GCGTTTGTGGGGTTACAGTTT 59.594 47.619 0.00 0.00 0.00 2.66
2847 5098 2.617774 GCGTTTGTGGGGTTACAGTTTA 59.382 45.455 0.00 0.00 0.00 2.01
2848 5099 3.548616 GCGTTTGTGGGGTTACAGTTTAC 60.549 47.826 0.00 0.00 0.00 2.01
2849 5100 3.626670 CGTTTGTGGGGTTACAGTTTACA 59.373 43.478 0.00 0.00 0.00 2.41
2850 5101 4.496175 CGTTTGTGGGGTTACAGTTTACAC 60.496 45.833 0.00 0.00 0.00 2.90
2851 5102 4.506937 TTGTGGGGTTACAGTTTACACT 57.493 40.909 0.00 0.00 0.00 3.55
2852 5103 4.506937 TGTGGGGTTACAGTTTACACTT 57.493 40.909 0.00 0.00 0.00 3.16
2853 5104 4.453751 TGTGGGGTTACAGTTTACACTTC 58.546 43.478 0.00 0.00 0.00 3.01
2854 5105 3.495753 GTGGGGTTACAGTTTACACTTCG 59.504 47.826 0.00 0.00 0.00 3.79
2855 5106 3.387374 TGGGGTTACAGTTTACACTTCGA 59.613 43.478 0.00 0.00 0.00 3.71
2856 5107 4.040706 TGGGGTTACAGTTTACACTTCGAT 59.959 41.667 0.00 0.00 0.00 3.59
2857 5108 4.390909 GGGGTTACAGTTTACACTTCGATG 59.609 45.833 0.00 0.00 0.00 3.84
2858 5109 4.390909 GGGTTACAGTTTACACTTCGATGG 59.609 45.833 3.12 0.00 0.00 3.51
2859 5110 4.992951 GGTTACAGTTTACACTTCGATGGT 59.007 41.667 3.12 1.19 0.00 3.55
2860 5111 6.158598 GGTTACAGTTTACACTTCGATGGTA 58.841 40.000 3.12 0.31 0.00 3.25
2861 5112 6.815142 GGTTACAGTTTACACTTCGATGGTAT 59.185 38.462 3.12 0.00 0.00 2.73
2862 5113 7.975616 GGTTACAGTTTACACTTCGATGGTATA 59.024 37.037 3.12 0.00 0.00 1.47
2863 5114 9.525409 GTTACAGTTTACACTTCGATGGTATAT 57.475 33.333 3.12 0.00 0.00 0.86
2866 5117 8.910944 ACAGTTTACACTTCGATGGTATATAGT 58.089 33.333 3.12 0.00 0.00 2.12
2872 5123 8.687292 ACACTTCGATGGTATATAGTACAAGA 57.313 34.615 3.12 0.00 0.00 3.02
2873 5124 8.784994 ACACTTCGATGGTATATAGTACAAGAG 58.215 37.037 3.12 0.00 0.00 2.85
2874 5125 8.784994 CACTTCGATGGTATATAGTACAAGAGT 58.215 37.037 3.12 0.00 0.00 3.24
2878 5129 9.783081 TCGATGGTATATAGTACAAGAGTAACA 57.217 33.333 0.00 0.00 30.67 2.41
2879 5130 9.823098 CGATGGTATATAGTACAAGAGTAACAC 57.177 37.037 0.00 0.00 30.67 3.32
2881 5132 8.469309 TGGTATATAGTACAAGAGTAACACCC 57.531 38.462 0.00 0.00 30.67 4.61
2882 5133 8.060689 TGGTATATAGTACAAGAGTAACACCCA 58.939 37.037 0.00 0.00 30.67 4.51
2883 5134 8.574737 GGTATATAGTACAAGAGTAACACCCAG 58.425 40.741 0.00 0.00 30.67 4.45
2884 5135 9.347240 GTATATAGTACAAGAGTAACACCCAGA 57.653 37.037 0.00 0.00 30.67 3.86
2885 5136 8.834004 ATATAGTACAAGAGTAACACCCAGAA 57.166 34.615 0.00 0.00 30.67 3.02
2886 5137 7.735326 ATAGTACAAGAGTAACACCCAGAAT 57.265 36.000 0.00 0.00 30.67 2.40
2887 5138 8.834004 ATAGTACAAGAGTAACACCCAGAATA 57.166 34.615 0.00 0.00 30.67 1.75
2888 5139 7.735326 AGTACAAGAGTAACACCCAGAATAT 57.265 36.000 0.00 0.00 30.67 1.28
2889 5140 7.783042 AGTACAAGAGTAACACCCAGAATATC 58.217 38.462 0.00 0.00 30.67 1.63
2890 5141 6.620877 ACAAGAGTAACACCCAGAATATCA 57.379 37.500 0.00 0.00 0.00 2.15
2891 5142 6.644347 ACAAGAGTAACACCCAGAATATCAG 58.356 40.000 0.00 0.00 0.00 2.90
2892 5143 6.213600 ACAAGAGTAACACCCAGAATATCAGT 59.786 38.462 0.00 0.00 0.00 3.41
2893 5144 6.227298 AGAGTAACACCCAGAATATCAGTG 57.773 41.667 0.00 0.00 34.61 3.66
2894 5145 5.721960 AGAGTAACACCCAGAATATCAGTGT 59.278 40.000 0.00 0.00 43.21 3.55
2897 5148 4.908601 ACACCCAGAATATCAGTGTTGA 57.091 40.909 0.00 0.00 38.47 3.18
2907 5158 6.600427 AGAATATCAGTGTTGATGTTGATGCA 59.400 34.615 4.57 0.00 42.84 3.96
2916 5167 5.106197 TGTTGATGTTGATGCATACAAGTCC 60.106 40.000 6.39 0.38 0.00 3.85
2923 5174 1.544724 TGCATACAAGTCCTTTGGGC 58.455 50.000 0.00 0.00 41.25 5.36
2952 5204 5.771153 TTGAAATGTCTGTCAATTGCTCA 57.229 34.783 0.00 1.95 0.00 4.26
2958 5210 2.951726 TCTGTCAATTGCTCAGACTCG 58.048 47.619 20.91 5.31 34.00 4.18
2960 5212 3.506067 TCTGTCAATTGCTCAGACTCGTA 59.494 43.478 20.91 6.29 34.00 3.43
2966 5218 4.566545 ATTGCTCAGACTCGTATCTCTG 57.433 45.455 0.00 0.00 36.07 3.35
2970 5222 4.218635 TGCTCAGACTCGTATCTCTGTTTT 59.781 41.667 0.00 0.00 36.16 2.43
2974 5226 7.626664 GCTCAGACTCGTATCTCTGTTTTCTTA 60.627 40.741 0.00 0.00 36.16 2.10
2978 5230 8.578151 AGACTCGTATCTCTGTTTTCTTAAACT 58.422 33.333 0.00 0.00 43.25 2.66
2981 5237 9.193133 CTCGTATCTCTGTTTTCTTAAACTGAA 57.807 33.333 10.24 4.54 45.53 3.02
3030 5286 6.402222 AGAGTTGCCTTCTTAGTACTCAATG 58.598 40.000 0.00 0.00 0.00 2.82
3032 5288 4.826274 TGCCTTCTTAGTACTCAATGCT 57.174 40.909 0.00 0.00 0.00 3.79
3033 5289 5.165961 TGCCTTCTTAGTACTCAATGCTT 57.834 39.130 0.00 0.00 0.00 3.91
3059 5320 1.876156 CAGTTCAACCTGCCTCTTGTC 59.124 52.381 0.00 0.00 0.00 3.18
3061 5322 2.147150 GTTCAACCTGCCTCTTGTCTC 58.853 52.381 0.00 0.00 0.00 3.36
3063 5324 2.050144 TCAACCTGCCTCTTGTCTCTT 58.950 47.619 0.00 0.00 0.00 2.85
3073 5334 8.743714 CCTGCCTCTTGTCTCTTTTTATTTAAT 58.256 33.333 0.00 0.00 0.00 1.40
3103 5364 9.118300 AGAATCAACTTGTCCATTTATCAGATC 57.882 33.333 0.00 0.00 0.00 2.75
3106 5367 8.498054 TCAACTTGTCCATTTATCAGATCTTC 57.502 34.615 0.00 0.00 0.00 2.87
3112 5373 8.954950 TGTCCATTTATCAGATCTTCTTTCTC 57.045 34.615 0.00 0.00 0.00 2.87
3120 5381 7.901283 ATCAGATCTTCTTTCTCAGAGATCA 57.099 36.000 0.00 0.00 37.97 2.92
3203 5469 5.931724 TGTTTTAGCTGACGATGAAATGAGA 59.068 36.000 0.00 0.00 0.00 3.27
3219 5485 4.959560 ATGAGACAGATCATCCTCCTTG 57.040 45.455 0.00 0.00 34.84 3.61
3220 5486 2.433604 TGAGACAGATCATCCTCCTTGC 59.566 50.000 0.00 0.00 0.00 4.01
3224 5490 3.047115 ACAGATCATCCTCCTTGCTGAT 58.953 45.455 0.00 0.00 0.00 2.90
3249 5515 4.700213 AGCAAGTTGTAGCCGATTTTGTAT 59.300 37.500 4.48 0.00 0.00 2.29
3251 5517 5.963586 GCAAGTTGTAGCCGATTTTGTATAC 59.036 40.000 4.48 0.00 0.00 1.47
3252 5518 6.402766 GCAAGTTGTAGCCGATTTTGTATACA 60.403 38.462 0.08 0.08 0.00 2.29
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
66 67 6.649557 AGCTAAAATGTTTTGTACGTAGCTCT 59.350 34.615 0.00 0.00 32.26 4.09
67 68 6.828672 AGCTAAAATGTTTTGTACGTAGCTC 58.171 36.000 0.00 0.00 32.26 4.09
82 83 9.903682 CCCAAAGATATGTCAATAGCTAAAATG 57.096 33.333 0.00 0.00 33.87 2.32
83 84 9.646522 ACCCAAAGATATGTCAATAGCTAAAAT 57.353 29.630 0.00 0.00 33.87 1.82
84 85 9.474313 AACCCAAAGATATGTCAATAGCTAAAA 57.526 29.630 0.00 0.00 33.87 1.52
85 86 9.474313 AAACCCAAAGATATGTCAATAGCTAAA 57.526 29.630 0.00 0.00 33.87 1.85
86 87 9.474313 AAAACCCAAAGATATGTCAATAGCTAA 57.526 29.630 0.00 0.00 33.87 3.09
87 88 9.474313 AAAAACCCAAAGATATGTCAATAGCTA 57.526 29.630 0.00 0.00 33.87 3.32
88 89 7.961326 AAAACCCAAAGATATGTCAATAGCT 57.039 32.000 0.00 0.00 36.56 3.32
89 90 7.010460 GCAAAAACCCAAAGATATGTCAATAGC 59.990 37.037 0.00 0.00 0.00 2.97
90 91 8.034215 TGCAAAAACCCAAAGATATGTCAATAG 58.966 33.333 0.00 0.00 0.00 1.73
91 92 7.816995 GTGCAAAAACCCAAAGATATGTCAATA 59.183 33.333 0.00 0.00 0.00 1.90
92 93 6.650390 GTGCAAAAACCCAAAGATATGTCAAT 59.350 34.615 0.00 0.00 0.00 2.57
93 94 5.988561 GTGCAAAAACCCAAAGATATGTCAA 59.011 36.000 0.00 0.00 0.00 3.18
94 95 5.537188 GTGCAAAAACCCAAAGATATGTCA 58.463 37.500 0.00 0.00 0.00 3.58
95 96 4.621034 CGTGCAAAAACCCAAAGATATGTC 59.379 41.667 0.00 0.00 0.00 3.06
96 97 4.279671 TCGTGCAAAAACCCAAAGATATGT 59.720 37.500 0.00 0.00 0.00 2.29
97 98 4.804108 TCGTGCAAAAACCCAAAGATATG 58.196 39.130 0.00 0.00 0.00 1.78
98 99 5.221342 TGTTCGTGCAAAAACCCAAAGATAT 60.221 36.000 9.32 0.00 0.00 1.63
99 100 4.098044 TGTTCGTGCAAAAACCCAAAGATA 59.902 37.500 9.32 0.00 0.00 1.98
100 101 3.118956 TGTTCGTGCAAAAACCCAAAGAT 60.119 39.130 9.32 0.00 0.00 2.40
101 102 2.231478 TGTTCGTGCAAAAACCCAAAGA 59.769 40.909 9.32 0.00 0.00 2.52
102 103 2.611518 TGTTCGTGCAAAAACCCAAAG 58.388 42.857 9.32 0.00 0.00 2.77
103 104 2.743636 TGTTCGTGCAAAAACCCAAA 57.256 40.000 9.32 0.00 0.00 3.28
104 105 2.969628 ATGTTCGTGCAAAAACCCAA 57.030 40.000 9.32 0.00 0.00 4.12
105 106 2.969628 AATGTTCGTGCAAAAACCCA 57.030 40.000 9.32 0.00 0.00 4.51
106 107 5.915812 ATAAAATGTTCGTGCAAAAACCC 57.084 34.783 9.32 0.00 0.00 4.11
107 108 7.372135 GTCAAATAAAATGTTCGTGCAAAAACC 59.628 33.333 9.32 0.00 0.00 3.27
108 109 7.900352 TGTCAAATAAAATGTTCGTGCAAAAAC 59.100 29.630 5.68 5.68 0.00 2.43
109 110 7.900352 GTGTCAAATAAAATGTTCGTGCAAAAA 59.100 29.630 0.00 0.00 0.00 1.94
110 111 7.063426 TGTGTCAAATAAAATGTTCGTGCAAAA 59.937 29.630 0.00 0.00 0.00 2.44
111 112 6.531594 TGTGTCAAATAAAATGTTCGTGCAAA 59.468 30.769 0.00 0.00 0.00 3.68
112 113 6.020281 GTGTGTCAAATAAAATGTTCGTGCAA 60.020 34.615 0.00 0.00 0.00 4.08
113 114 5.457148 GTGTGTCAAATAAAATGTTCGTGCA 59.543 36.000 0.00 0.00 0.00 4.57
252 256 7.875041 ACTAGCGAGCAATTTATGATACTGAAT 59.125 33.333 0.00 0.00 0.00 2.57
260 264 6.479001 GGTAAGAACTAGCGAGCAATTTATGA 59.521 38.462 0.00 0.00 0.00 2.15
261 265 6.257849 TGGTAAGAACTAGCGAGCAATTTATG 59.742 38.462 0.00 0.00 0.00 1.90
270 274 1.476891 TGCCTGGTAAGAACTAGCGAG 59.523 52.381 0.00 0.00 33.06 5.03
311 315 1.207329 CGACACCTTCTTTCCCCTAGG 59.793 57.143 0.06 0.06 0.00 3.02
329 333 4.220821 GCTATCTTAGGGTTGGATGATCGA 59.779 45.833 0.00 0.00 0.00 3.59
343 347 3.119291 CACGGCTCAACTGCTATCTTAG 58.881 50.000 0.00 0.00 0.00 2.18
345 349 1.406069 CCACGGCTCAACTGCTATCTT 60.406 52.381 0.00 0.00 0.00 2.40
348 352 0.391661 CACCACGGCTCAACTGCTAT 60.392 55.000 0.00 0.00 0.00 2.97
356 360 4.007644 CCAGCTCACCACGGCTCA 62.008 66.667 0.00 0.00 36.59 4.26
375 379 7.639378 TCCCTTAATTATGAGGCTTTGTTAGT 58.361 34.615 0.00 0.00 30.96 2.24
393 397 1.559065 CCTCGTGCCCCTTCCCTTAA 61.559 60.000 0.00 0.00 0.00 1.85
394 398 1.993391 CCTCGTGCCCCTTCCCTTA 60.993 63.158 0.00 0.00 0.00 2.69
395 399 3.330720 CCTCGTGCCCCTTCCCTT 61.331 66.667 0.00 0.00 0.00 3.95
398 402 3.978571 GAAGCCTCGTGCCCCTTCC 62.979 68.421 0.00 0.00 42.71 3.46
399 403 2.436824 GAAGCCTCGTGCCCCTTC 60.437 66.667 0.00 0.00 42.71 3.46
400 404 2.069165 AAAGAAGCCTCGTGCCCCTT 62.069 55.000 0.00 0.00 42.71 3.95
401 405 2.529744 AAAGAAGCCTCGTGCCCCT 61.530 57.895 0.00 0.00 42.71 4.79
402 406 2.034221 AAAGAAGCCTCGTGCCCC 59.966 61.111 0.00 0.00 42.71 5.80
403 407 1.600916 ACAAAGAAGCCTCGTGCCC 60.601 57.895 0.00 0.00 42.71 5.36
404 408 1.166531 ACACAAAGAAGCCTCGTGCC 61.167 55.000 0.00 0.00 42.71 5.01
407 411 1.583054 GTCACACAAAGAAGCCTCGT 58.417 50.000 0.00 0.00 0.00 4.18
409 413 2.262423 AGGTCACACAAAGAAGCCTC 57.738 50.000 0.00 0.00 0.00 4.70
454 530 7.650890 TGCCAAAATTAGCATGACATGTATAG 58.349 34.615 16.62 0.00 33.08 1.31
502 1832 4.599041 TGATTTAGGATTTCACACAGGGG 58.401 43.478 0.00 0.00 0.00 4.79
506 1836 4.458989 GTGGCTGATTTAGGATTTCACACA 59.541 41.667 0.00 0.00 0.00 3.72
598 1929 2.024022 CGTGCCACACCAACAACG 59.976 61.111 0.00 0.00 0.00 4.10
622 1957 2.003548 AGCATCCCCACCTCTTCCC 61.004 63.158 0.00 0.00 0.00 3.97
658 1995 1.612950 CTGTGTGCATAGCCACCAAAA 59.387 47.619 3.04 0.00 34.85 2.44
659 1996 1.202867 TCTGTGTGCATAGCCACCAAA 60.203 47.619 3.04 0.00 34.85 3.28
683 2021 1.212195 GGAGTTCATCCCCAGTAACCC 59.788 57.143 0.00 0.00 43.01 4.11
684 2022 1.134491 CGGAGTTCATCCCCAGTAACC 60.134 57.143 0.00 0.00 46.50 2.85
687 2025 0.325296 AGCGGAGTTCATCCCCAGTA 60.325 55.000 0.00 0.00 46.50 2.74
688 2026 1.201429 AAGCGGAGTTCATCCCCAGT 61.201 55.000 0.00 0.00 46.50 4.00
694 2032 1.134401 TCCATGGAAGCGGAGTTCATC 60.134 52.381 13.46 0.00 0.00 2.92
713 2051 3.119352 GCATGGTCCCTTCTGAAACAATC 60.119 47.826 0.00 0.00 0.00 2.67
714 2052 2.827921 GCATGGTCCCTTCTGAAACAAT 59.172 45.455 0.00 0.00 0.00 2.71
720 2081 2.195727 TGTATGCATGGTCCCTTCTGA 58.804 47.619 10.16 0.00 0.00 3.27
723 2084 6.655078 AAATATTGTATGCATGGTCCCTTC 57.345 37.500 10.16 0.00 0.00 3.46
744 2105 5.470777 CGTCTACAATAACCCAACTCCAAAA 59.529 40.000 0.00 0.00 0.00 2.44
812 2177 8.025243 TCCTTAAACTGAAACGTGATATCAAC 57.975 34.615 7.07 1.28 0.00 3.18
844 2209 7.867403 GTCAAACTTATCTTGCCAATTCTGAAA 59.133 33.333 0.00 0.00 0.00 2.69
847 2212 6.680810 TGTCAAACTTATCTTGCCAATTCTG 58.319 36.000 0.00 0.00 0.00 3.02
848 2213 6.899393 TGTCAAACTTATCTTGCCAATTCT 57.101 33.333 0.00 0.00 0.00 2.40
849 2214 6.366061 GGTTGTCAAACTTATCTTGCCAATTC 59.634 38.462 0.00 0.00 36.48 2.17
854 2219 3.056821 GGGGTTGTCAAACTTATCTTGCC 60.057 47.826 0.00 0.00 36.48 4.52
877 2356 1.430992 AAAACCCTTCCTCTCACCGA 58.569 50.000 0.00 0.00 0.00 4.69
878 2357 2.271944 AAAAACCCTTCCTCTCACCG 57.728 50.000 0.00 0.00 0.00 4.94
897 2378 4.695455 CCAGAAACCTCTATGCTCGAAAAA 59.305 41.667 0.00 0.00 0.00 1.94
917 2398 6.868339 CCTTTGCAAACTCTAAATTTACCCAG 59.132 38.462 8.05 0.00 0.00 4.45
920 2401 7.384115 GGTTCCTTTGCAAACTCTAAATTTACC 59.616 37.037 8.05 1.28 0.00 2.85
980 2497 2.203029 GGGCTGGGCTTAGCGTAC 60.203 66.667 0.00 0.00 44.60 3.67
1062 2583 1.205657 GTGTGTGTGTGGTAGTGACG 58.794 55.000 0.00 0.00 0.00 4.35
1063 2584 1.931172 GTGTGTGTGTGTGGTAGTGAC 59.069 52.381 0.00 0.00 0.00 3.67
1064 2585 1.550976 TGTGTGTGTGTGTGGTAGTGA 59.449 47.619 0.00 0.00 0.00 3.41
1065 2586 1.663643 GTGTGTGTGTGTGTGGTAGTG 59.336 52.381 0.00 0.00 0.00 2.74
1066 2587 1.276705 TGTGTGTGTGTGTGTGGTAGT 59.723 47.619 0.00 0.00 0.00 2.73
1067 2588 1.663643 GTGTGTGTGTGTGTGTGGTAG 59.336 52.381 0.00 0.00 0.00 3.18
1068 2589 1.002087 TGTGTGTGTGTGTGTGTGGTA 59.998 47.619 0.00 0.00 0.00 3.25
1069 2590 0.250510 TGTGTGTGTGTGTGTGTGGT 60.251 50.000 0.00 0.00 0.00 4.16
1070 2591 0.167908 GTGTGTGTGTGTGTGTGTGG 59.832 55.000 0.00 0.00 0.00 4.17
1071 2592 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1072 2593 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1073 2594 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1074 2595 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1075 2596 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1076 2597 0.871722 GTGTGTGTGTGTGTGTGTGT 59.128 50.000 0.00 0.00 0.00 3.72
1077 2598 0.871057 TGTGTGTGTGTGTGTGTGTG 59.129 50.000 0.00 0.00 0.00 3.82
1078 2599 1.535028 CTTGTGTGTGTGTGTGTGTGT 59.465 47.619 0.00 0.00 0.00 3.72
1350 2899 3.118408 CCAACGGAATGATGTCTAGGGAA 60.118 47.826 0.00 0.00 0.00 3.97
1424 2979 0.521242 GTAAACGCTGCGAATGCCAG 60.521 55.000 30.47 0.00 41.78 4.85
1456 3014 2.433318 GCAGGAGTCGTGGAGCAC 60.433 66.667 14.33 0.00 0.00 4.40
1513 3080 1.012486 CGAGTTGCCGGGTTGTAGAC 61.012 60.000 2.18 0.00 0.00 2.59
1694 3282 0.254747 GCACCCTATGTACCTTGGCA 59.745 55.000 0.00 0.00 0.00 4.92
1720 3314 6.349611 GCTGAAATGTGTATCAATTCCTGTGT 60.350 38.462 0.00 0.00 35.69 3.72
1722 3316 5.948162 AGCTGAAATGTGTATCAATTCCTGT 59.052 36.000 0.00 0.00 35.69 4.00
1723 3323 6.263344 CAGCTGAAATGTGTATCAATTCCTG 58.737 40.000 8.42 0.00 35.69 3.86
1790 3394 5.960113 TGGTGTCAAATACCATTACAATGC 58.040 37.500 0.00 0.00 43.00 3.56
1832 3442 1.766069 TACAATCGGACATCGCATCG 58.234 50.000 0.00 0.00 39.05 3.84
1851 3461 1.377725 CAGGTCCTCGCAGCCAATT 60.378 57.895 0.00 0.00 0.00 2.32
1862 3475 1.352352 CACCCATCTCAAACAGGTCCT 59.648 52.381 0.00 0.00 0.00 3.85
1863 3476 1.351017 TCACCCATCTCAAACAGGTCC 59.649 52.381 0.00 0.00 0.00 4.46
1908 3521 2.972625 TCAACGCTTGTCCCTTCATAG 58.027 47.619 0.00 0.00 0.00 2.23
2044 3657 1.347707 ACTGTCCCATGACGTGACAAT 59.652 47.619 7.04 0.00 44.86 2.71
2055 3668 0.107993 CGAGCACATCACTGTCCCAT 60.108 55.000 0.00 0.00 31.62 4.00
2062 3678 2.031516 GCAGCACGAGCACATCACT 61.032 57.895 7.77 0.00 45.49 3.41
2084 3700 4.096984 CCTGAAGTAGCCAATCATCAAACC 59.903 45.833 0.00 0.00 0.00 3.27
2085 3701 4.702131 ACCTGAAGTAGCCAATCATCAAAC 59.298 41.667 0.00 0.00 0.00 2.93
2302 3923 1.565759 TGAGGCCATAAGAAGCACCAT 59.434 47.619 5.01 0.00 0.00 3.55
2335 3959 1.065854 ACCCTCAATACTGCAGCTGAC 60.066 52.381 20.43 9.67 0.00 3.51
2350 3974 3.320673 AGATGAAACGAACTGACCCTC 57.679 47.619 0.00 0.00 0.00 4.30
2407 4646 7.815840 TGAAGTGTCAATTACTTGAAATGGA 57.184 32.000 0.00 0.00 42.85 3.41
2437 4676 4.092821 TCAAGCCGATGTTAAGATTGAACG 59.907 41.667 1.35 0.00 0.00 3.95
2481 4724 5.391950 CCAGACCATGATAAACCGTTCTTTG 60.392 44.000 0.00 0.00 0.00 2.77
2514 4757 0.673437 CAACGGGGTGCACAATCTTT 59.327 50.000 20.43 4.33 0.00 2.52
2530 4773 1.237285 AACATGGCTCGCAGTCCAAC 61.237 55.000 0.00 0.00 35.35 3.77
2533 4776 0.745845 ATGAACATGGCTCGCAGTCC 60.746 55.000 0.00 0.00 0.00 3.85
2540 4791 7.433425 GCTTACAGATAAAAATGAACATGGCTC 59.567 37.037 0.00 0.00 0.00 4.70
2579 4830 6.005066 ACCAATGGTACTCATGAATCATGA 57.995 37.500 22.84 22.84 40.36 3.07
2580 4831 6.319405 TCAACCAATGGTACTCATGAATCATG 59.681 38.462 16.63 16.63 37.86 3.07
2581 4832 6.425735 TCAACCAATGGTACTCATGAATCAT 58.574 36.000 4.88 0.00 33.12 2.45
2582 4833 5.814481 TCAACCAATGGTACTCATGAATCA 58.186 37.500 4.88 0.00 33.12 2.57
2583 4834 6.757897 TTCAACCAATGGTACTCATGAATC 57.242 37.500 4.88 0.00 33.12 2.52
2584 4835 6.350445 GCTTTCAACCAATGGTACTCATGAAT 60.350 38.462 14.88 0.00 33.12 2.57
2585 4836 5.048083 GCTTTCAACCAATGGTACTCATGAA 60.048 40.000 4.88 8.90 33.12 2.57
2588 4839 4.406456 TGCTTTCAACCAATGGTACTCAT 58.594 39.130 4.88 0.00 33.12 2.90
2603 4854 1.542915 GCTTGAGGCAATCTGCTTTCA 59.457 47.619 0.00 1.14 44.28 2.69
2625 4876 2.932614 CACACAATTCCTCGTGATCTCC 59.067 50.000 1.02 0.00 36.91 3.71
2626 4877 3.589988 ACACACAATTCCTCGTGATCTC 58.410 45.455 1.02 0.00 36.91 2.75
2627 4878 3.006859 TGACACACAATTCCTCGTGATCT 59.993 43.478 1.02 0.00 36.91 2.75
2628 4879 3.325870 TGACACACAATTCCTCGTGATC 58.674 45.455 1.02 0.00 36.91 2.92
2629 4880 3.401033 TGACACACAATTCCTCGTGAT 57.599 42.857 1.02 0.00 36.91 3.06
2630 4881 2.900716 TGACACACAATTCCTCGTGA 57.099 45.000 1.02 0.00 36.91 4.35
2631 4882 2.349817 GCTTGACACACAATTCCTCGTG 60.350 50.000 0.00 0.00 37.88 4.35
2632 4883 1.873591 GCTTGACACACAATTCCTCGT 59.126 47.619 0.00 0.00 37.88 4.18
2633 4884 1.872952 TGCTTGACACACAATTCCTCG 59.127 47.619 0.00 0.00 37.88 4.63
2634 4885 3.141398 TCTGCTTGACACACAATTCCTC 58.859 45.455 0.00 0.00 37.88 3.71
2635 4886 3.213206 TCTGCTTGACACACAATTCCT 57.787 42.857 0.00 0.00 37.88 3.36
2636 4887 4.232221 CAATCTGCTTGACACACAATTCC 58.768 43.478 0.00 0.00 36.97 3.01
2637 4888 4.678287 CACAATCTGCTTGACACACAATTC 59.322 41.667 0.00 0.00 38.29 2.17
2638 4889 4.613944 CACAATCTGCTTGACACACAATT 58.386 39.130 0.00 0.00 38.29 2.32
2639 4890 3.551454 GCACAATCTGCTTGACACACAAT 60.551 43.478 0.00 0.00 43.33 2.71
2640 4891 2.223548 GCACAATCTGCTTGACACACAA 60.224 45.455 0.00 0.00 43.33 3.33
2641 4892 1.334556 GCACAATCTGCTTGACACACA 59.665 47.619 0.00 0.00 43.33 3.72
2642 4893 1.335324 GGCACAATCTGCTTGACACAC 60.335 52.381 0.00 0.00 46.25 3.82
2643 4894 0.953727 GGCACAATCTGCTTGACACA 59.046 50.000 0.00 0.00 46.25 3.72
2644 4895 0.953727 TGGCACAATCTGCTTGACAC 59.046 50.000 0.00 0.00 46.25 3.67
2645 4896 3.418022 TGGCACAATCTGCTTGACA 57.582 47.368 0.00 0.00 46.25 3.58
2657 4908 1.792757 ATTGGAGGGAGCTTGGCACA 61.793 55.000 0.00 0.00 0.00 4.57
2658 4909 0.613012 AATTGGAGGGAGCTTGGCAC 60.613 55.000 0.00 0.00 0.00 5.01
2659 4910 0.998928 TAATTGGAGGGAGCTTGGCA 59.001 50.000 0.00 0.00 0.00 4.92
2660 4911 1.064389 AGTAATTGGAGGGAGCTTGGC 60.064 52.381 0.00 0.00 0.00 4.52
2661 4912 4.713792 ATAGTAATTGGAGGGAGCTTGG 57.286 45.455 0.00 0.00 0.00 3.61
2662 4913 7.410120 AAAAATAGTAATTGGAGGGAGCTTG 57.590 36.000 0.00 0.00 0.00 4.01
2683 4934 4.156739 GCAAACAATTGAACCCCACAAAAA 59.843 37.500 13.59 0.00 38.94 1.94
2684 4935 3.691609 GCAAACAATTGAACCCCACAAAA 59.308 39.130 13.59 0.00 38.94 2.44
2685 4936 3.054802 AGCAAACAATTGAACCCCACAAA 60.055 39.130 13.59 0.00 38.94 2.83
2686 4937 2.503356 AGCAAACAATTGAACCCCACAA 59.497 40.909 13.59 0.00 38.94 3.33
2687 4938 2.114616 AGCAAACAATTGAACCCCACA 58.885 42.857 13.59 0.00 38.94 4.17
2688 4939 2.908688 AGCAAACAATTGAACCCCAC 57.091 45.000 13.59 0.00 38.94 4.61
2689 4940 3.037549 AGAAGCAAACAATTGAACCCCA 58.962 40.909 13.59 0.00 38.94 4.96
2690 4941 3.392882 CAGAAGCAAACAATTGAACCCC 58.607 45.455 13.59 0.00 38.94 4.95
2691 4942 3.069443 TCCAGAAGCAAACAATTGAACCC 59.931 43.478 13.59 0.00 38.94 4.11
2692 4943 4.320608 TCCAGAAGCAAACAATTGAACC 57.679 40.909 13.59 0.00 38.94 3.62
2693 4944 5.291971 ACATCCAGAAGCAAACAATTGAAC 58.708 37.500 13.59 0.00 38.94 3.18
2694 4945 5.534207 ACATCCAGAAGCAAACAATTGAA 57.466 34.783 13.59 0.00 38.94 2.69
2695 4946 6.839124 ATACATCCAGAAGCAAACAATTGA 57.161 33.333 13.59 0.00 38.94 2.57
2696 4947 9.027129 CATAATACATCCAGAAGCAAACAATTG 57.973 33.333 3.24 3.24 39.65 2.32
2697 4948 8.752187 ACATAATACATCCAGAAGCAAACAATT 58.248 29.630 0.00 0.00 0.00 2.32
2698 4949 8.192774 CACATAATACATCCAGAAGCAAACAAT 58.807 33.333 0.00 0.00 0.00 2.71
2699 4950 7.537715 CACATAATACATCCAGAAGCAAACAA 58.462 34.615 0.00 0.00 0.00 2.83
2700 4951 6.404623 GCACATAATACATCCAGAAGCAAACA 60.405 38.462 0.00 0.00 0.00 2.83
2701 4952 5.973565 GCACATAATACATCCAGAAGCAAAC 59.026 40.000 0.00 0.00 0.00 2.93
2702 4953 5.067674 GGCACATAATACATCCAGAAGCAAA 59.932 40.000 0.00 0.00 0.00 3.68
2703 4954 4.580167 GGCACATAATACATCCAGAAGCAA 59.420 41.667 0.00 0.00 0.00 3.91
2704 4955 4.136796 GGCACATAATACATCCAGAAGCA 58.863 43.478 0.00 0.00 0.00 3.91
2705 4956 4.136796 TGGCACATAATACATCCAGAAGC 58.863 43.478 0.00 0.00 0.00 3.86
2722 4973 0.889994 TGAGCAATCACCAATGGCAC 59.110 50.000 0.00 0.00 36.69 5.01
2723 4974 1.179152 CTGAGCAATCACCAATGGCA 58.821 50.000 0.00 0.00 36.69 4.92
2724 4975 0.179119 GCTGAGCAATCACCAATGGC 60.179 55.000 0.00 0.00 34.11 4.40
2725 4976 1.471119 AGCTGAGCAATCACCAATGG 58.529 50.000 7.39 0.00 0.00 3.16
2726 4977 2.357009 GGTAGCTGAGCAATCACCAATG 59.643 50.000 7.39 0.00 0.00 2.82
2727 4978 2.648059 GGTAGCTGAGCAATCACCAAT 58.352 47.619 7.39 0.00 0.00 3.16
2728 4979 1.340017 GGGTAGCTGAGCAATCACCAA 60.340 52.381 7.39 0.00 0.00 3.67
2729 4980 0.253044 GGGTAGCTGAGCAATCACCA 59.747 55.000 7.39 0.00 0.00 4.17
2730 4981 0.253044 TGGGTAGCTGAGCAATCACC 59.747 55.000 7.39 8.06 0.00 4.02
2731 4982 1.339055 TGTGGGTAGCTGAGCAATCAC 60.339 52.381 7.39 9.93 0.00 3.06
2732 4983 0.983467 TGTGGGTAGCTGAGCAATCA 59.017 50.000 7.39 0.00 0.00 2.57
2733 4984 2.338577 ATGTGGGTAGCTGAGCAATC 57.661 50.000 7.39 0.00 0.00 2.67
2734 4985 2.025981 TGAATGTGGGTAGCTGAGCAAT 60.026 45.455 7.39 0.00 0.00 3.56
2735 4986 1.350684 TGAATGTGGGTAGCTGAGCAA 59.649 47.619 7.39 0.00 0.00 3.91
2736 4987 0.983467 TGAATGTGGGTAGCTGAGCA 59.017 50.000 7.39 0.00 0.00 4.26
2737 4988 1.065854 ACTGAATGTGGGTAGCTGAGC 60.066 52.381 0.00 0.00 0.00 4.26
2738 4989 3.340814 AACTGAATGTGGGTAGCTGAG 57.659 47.619 0.00 0.00 0.00 3.35
2739 4990 3.788227 AAACTGAATGTGGGTAGCTGA 57.212 42.857 0.00 0.00 0.00 4.26
2740 4991 4.853924 AAAAACTGAATGTGGGTAGCTG 57.146 40.909 0.00 0.00 0.00 4.24
2758 5009 0.871722 AGACGCGCATACTGCAAAAA 59.128 45.000 5.73 0.00 45.36 1.94
2759 5010 0.165727 CAGACGCGCATACTGCAAAA 59.834 50.000 5.73 0.00 45.36 2.44
2760 5011 0.948623 ACAGACGCGCATACTGCAAA 60.949 50.000 20.03 0.00 45.36 3.68
2761 5012 1.374125 ACAGACGCGCATACTGCAA 60.374 52.632 20.03 0.00 45.36 4.08
2762 5013 2.094066 CACAGACGCGCATACTGCA 61.094 57.895 20.03 0.00 45.36 4.41
2763 5014 2.094659 ACACAGACGCGCATACTGC 61.095 57.895 20.03 0.00 40.69 4.40
2764 5015 0.732538 TCACACAGACGCGCATACTG 60.733 55.000 19.00 19.00 37.62 2.74
2765 5016 0.456824 CTCACACAGACGCGCATACT 60.457 55.000 5.73 0.00 0.00 2.12
2766 5017 0.732880 ACTCACACAGACGCGCATAC 60.733 55.000 5.73 0.00 0.00 2.39
2767 5018 0.038618 AACTCACACAGACGCGCATA 60.039 50.000 5.73 0.00 0.00 3.14
2768 5019 0.880278 AAACTCACACAGACGCGCAT 60.880 50.000 5.73 0.00 0.00 4.73
2769 5020 0.249114 TAAACTCACACAGACGCGCA 60.249 50.000 5.73 0.00 0.00 6.09
2770 5021 1.068474 ATAAACTCACACAGACGCGC 58.932 50.000 5.73 0.00 0.00 6.86
2771 5022 3.788434 AAATAAACTCACACAGACGCG 57.212 42.857 3.53 3.53 0.00 6.01
2772 5023 4.213482 AGGAAAATAAACTCACACAGACGC 59.787 41.667 0.00 0.00 0.00 5.19
2773 5024 5.236478 ACAGGAAAATAAACTCACACAGACG 59.764 40.000 0.00 0.00 0.00 4.18
2774 5025 6.260050 TCACAGGAAAATAAACTCACACAGAC 59.740 38.462 0.00 0.00 0.00 3.51
2775 5026 6.353323 TCACAGGAAAATAAACTCACACAGA 58.647 36.000 0.00 0.00 0.00 3.41
2776 5027 6.618287 TCACAGGAAAATAAACTCACACAG 57.382 37.500 0.00 0.00 0.00 3.66
2777 5028 6.770303 TCATCACAGGAAAATAAACTCACACA 59.230 34.615 0.00 0.00 0.00 3.72
2778 5029 7.202016 TCATCACAGGAAAATAAACTCACAC 57.798 36.000 0.00 0.00 0.00 3.82
2779 5030 7.815840 TTCATCACAGGAAAATAAACTCACA 57.184 32.000 0.00 0.00 0.00 3.58
2780 5031 8.299570 ACATTCATCACAGGAAAATAAACTCAC 58.700 33.333 0.00 0.00 0.00 3.51
2781 5032 8.408043 ACATTCATCACAGGAAAATAAACTCA 57.592 30.769 0.00 0.00 0.00 3.41
2782 5033 9.774742 GTACATTCATCACAGGAAAATAAACTC 57.225 33.333 0.00 0.00 0.00 3.01
2783 5034 9.295825 TGTACATTCATCACAGGAAAATAAACT 57.704 29.630 0.00 0.00 0.00 2.66
2788 5039 8.896744 CAGTATGTACATTCATCACAGGAAAAT 58.103 33.333 14.77 0.00 0.00 1.82
2789 5040 7.336679 CCAGTATGTACATTCATCACAGGAAAA 59.663 37.037 14.77 0.00 0.00 2.29
2790 5041 6.823182 CCAGTATGTACATTCATCACAGGAAA 59.177 38.462 14.77 0.00 0.00 3.13
2791 5042 6.070251 ACCAGTATGTACATTCATCACAGGAA 60.070 38.462 14.77 0.00 0.00 3.36
2792 5043 5.425217 ACCAGTATGTACATTCATCACAGGA 59.575 40.000 14.77 0.00 0.00 3.86
2793 5044 5.525012 CACCAGTATGTACATTCATCACAGG 59.475 44.000 14.77 13.65 0.00 4.00
2794 5045 6.340522 TCACCAGTATGTACATTCATCACAG 58.659 40.000 14.77 2.53 0.00 3.66
2795 5046 6.293004 TCACCAGTATGTACATTCATCACA 57.707 37.500 14.77 0.00 0.00 3.58
2796 5047 7.792374 ATTCACCAGTATGTACATTCATCAC 57.208 36.000 14.77 5.62 0.00 3.06
2797 5048 7.828717 ACAATTCACCAGTATGTACATTCATCA 59.171 33.333 14.77 0.00 0.00 3.07
2798 5049 8.124823 CACAATTCACCAGTATGTACATTCATC 58.875 37.037 14.77 3.12 0.00 2.92
2799 5050 7.611467 ACACAATTCACCAGTATGTACATTCAT 59.389 33.333 14.77 0.00 0.00 2.57
2800 5051 6.939730 ACACAATTCACCAGTATGTACATTCA 59.060 34.615 14.77 0.00 0.00 2.57
2801 5052 7.243487 CACACAATTCACCAGTATGTACATTC 58.757 38.462 14.77 9.17 0.00 2.67
2802 5053 6.349280 GCACACAATTCACCAGTATGTACATT 60.349 38.462 14.77 0.00 0.00 2.71
2803 5054 5.123820 GCACACAATTCACCAGTATGTACAT 59.876 40.000 13.93 13.93 0.00 2.29
2804 5055 4.454161 GCACACAATTCACCAGTATGTACA 59.546 41.667 0.00 0.00 0.00 2.90
2805 5056 4.435518 CGCACACAATTCACCAGTATGTAC 60.436 45.833 0.00 0.00 0.00 2.90
2806 5057 3.682377 CGCACACAATTCACCAGTATGTA 59.318 43.478 0.00 0.00 0.00 2.29
2807 5058 2.483877 CGCACACAATTCACCAGTATGT 59.516 45.455 0.00 0.00 0.00 2.29
2808 5059 2.483877 ACGCACACAATTCACCAGTATG 59.516 45.455 0.00 0.00 0.00 2.39
2809 5060 2.778299 ACGCACACAATTCACCAGTAT 58.222 42.857 0.00 0.00 0.00 2.12
2810 5061 2.248280 ACGCACACAATTCACCAGTA 57.752 45.000 0.00 0.00 0.00 2.74
2811 5062 1.388547 AACGCACACAATTCACCAGT 58.611 45.000 0.00 0.00 0.00 4.00
2812 5063 2.118683 CAAACGCACACAATTCACCAG 58.881 47.619 0.00 0.00 0.00 4.00
2813 5064 1.474478 ACAAACGCACACAATTCACCA 59.526 42.857 0.00 0.00 0.00 4.17
2814 5065 1.851666 CACAAACGCACACAATTCACC 59.148 47.619 0.00 0.00 0.00 4.02
2815 5066 1.851666 CCACAAACGCACACAATTCAC 59.148 47.619 0.00 0.00 0.00 3.18
2816 5067 1.202348 CCCACAAACGCACACAATTCA 60.202 47.619 0.00 0.00 0.00 2.57
2817 5068 1.486439 CCCACAAACGCACACAATTC 58.514 50.000 0.00 0.00 0.00 2.17
2818 5069 0.103937 CCCCACAAACGCACACAATT 59.896 50.000 0.00 0.00 0.00 2.32
2819 5070 1.040339 ACCCCACAAACGCACACAAT 61.040 50.000 0.00 0.00 0.00 2.71
2820 5071 1.251527 AACCCCACAAACGCACACAA 61.252 50.000 0.00 0.00 0.00 3.33
2821 5072 0.393944 TAACCCCACAAACGCACACA 60.394 50.000 0.00 0.00 0.00 3.72
2822 5073 0.029700 GTAACCCCACAAACGCACAC 59.970 55.000 0.00 0.00 0.00 3.82
2823 5074 0.393944 TGTAACCCCACAAACGCACA 60.394 50.000 0.00 0.00 0.00 4.57
2824 5075 0.309612 CTGTAACCCCACAAACGCAC 59.690 55.000 0.00 0.00 0.00 5.34
2825 5076 0.107116 ACTGTAACCCCACAAACGCA 60.107 50.000 0.00 0.00 0.00 5.24
2826 5077 1.026584 AACTGTAACCCCACAAACGC 58.973 50.000 0.00 0.00 0.00 4.84
2827 5078 3.626670 TGTAAACTGTAACCCCACAAACG 59.373 43.478 0.00 0.00 0.00 3.60
2828 5079 4.641541 AGTGTAAACTGTAACCCCACAAAC 59.358 41.667 0.00 0.00 0.00 2.93
2829 5080 4.857679 AGTGTAAACTGTAACCCCACAAA 58.142 39.130 0.00 0.00 0.00 2.83
2830 5081 4.506937 AGTGTAAACTGTAACCCCACAA 57.493 40.909 0.00 0.00 0.00 3.33
2831 5082 4.453751 GAAGTGTAAACTGTAACCCCACA 58.546 43.478 0.00 0.00 0.00 4.17
2832 5083 3.495753 CGAAGTGTAAACTGTAACCCCAC 59.504 47.826 0.00 0.00 0.00 4.61
2833 5084 3.387374 TCGAAGTGTAAACTGTAACCCCA 59.613 43.478 0.00 0.00 0.00 4.96
2834 5085 3.993920 TCGAAGTGTAAACTGTAACCCC 58.006 45.455 0.00 0.00 0.00 4.95
2835 5086 4.390909 CCATCGAAGTGTAAACTGTAACCC 59.609 45.833 0.00 0.00 0.00 4.11
2836 5087 4.992951 ACCATCGAAGTGTAAACTGTAACC 59.007 41.667 0.00 0.00 0.00 2.85
2837 5088 7.823149 ATACCATCGAAGTGTAAACTGTAAC 57.177 36.000 0.00 0.00 0.00 2.50
2840 5091 8.910944 ACTATATACCATCGAAGTGTAAACTGT 58.089 33.333 0.00 0.00 0.00 3.55
2846 5097 9.783081 TCTTGTACTATATACCATCGAAGTGTA 57.217 33.333 0.00 0.00 0.00 2.90
2847 5098 8.687292 TCTTGTACTATATACCATCGAAGTGT 57.313 34.615 0.00 0.00 0.00 3.55
2848 5099 8.784994 ACTCTTGTACTATATACCATCGAAGTG 58.215 37.037 0.00 0.00 0.00 3.16
2849 5100 8.921353 ACTCTTGTACTATATACCATCGAAGT 57.079 34.615 0.00 0.00 0.00 3.01
2852 5103 9.783081 TGTTACTCTTGTACTATATACCATCGA 57.217 33.333 0.00 0.00 0.00 3.59
2853 5104 9.823098 GTGTTACTCTTGTACTATATACCATCG 57.177 37.037 0.00 0.00 0.00 3.84
2855 5106 9.086758 GGGTGTTACTCTTGTACTATATACCAT 57.913 37.037 0.00 0.00 0.00 3.55
2856 5107 8.060689 TGGGTGTTACTCTTGTACTATATACCA 58.939 37.037 0.00 0.00 0.00 3.25
2857 5108 8.469309 TGGGTGTTACTCTTGTACTATATACC 57.531 38.462 0.00 0.00 0.00 2.73
2858 5109 9.347240 TCTGGGTGTTACTCTTGTACTATATAC 57.653 37.037 0.00 0.00 0.00 1.47
2859 5110 9.925545 TTCTGGGTGTTACTCTTGTACTATATA 57.074 33.333 0.00 0.00 0.00 0.86
2860 5111 8.834004 TTCTGGGTGTTACTCTTGTACTATAT 57.166 34.615 0.00 0.00 0.00 0.86
2861 5112 8.834004 ATTCTGGGTGTTACTCTTGTACTATA 57.166 34.615 0.00 0.00 0.00 1.31
2862 5113 7.735326 ATTCTGGGTGTTACTCTTGTACTAT 57.265 36.000 0.00 0.00 0.00 2.12
2863 5114 8.834004 ATATTCTGGGTGTTACTCTTGTACTA 57.166 34.615 0.00 0.00 0.00 1.82
2864 5115 7.399191 TGATATTCTGGGTGTTACTCTTGTACT 59.601 37.037 0.00 0.00 0.00 2.73
2865 5116 7.553334 TGATATTCTGGGTGTTACTCTTGTAC 58.447 38.462 0.00 0.00 0.00 2.90
2866 5117 7.399191 ACTGATATTCTGGGTGTTACTCTTGTA 59.601 37.037 0.00 0.00 0.00 2.41
2867 5118 6.213600 ACTGATATTCTGGGTGTTACTCTTGT 59.786 38.462 0.00 0.00 0.00 3.16
2868 5119 6.536582 CACTGATATTCTGGGTGTTACTCTTG 59.463 42.308 0.00 0.00 0.00 3.02
2869 5120 6.213600 ACACTGATATTCTGGGTGTTACTCTT 59.786 38.462 0.00 0.00 37.80 2.85
2870 5121 5.721960 ACACTGATATTCTGGGTGTTACTCT 59.278 40.000 0.00 0.00 37.80 3.24
2871 5122 5.978814 ACACTGATATTCTGGGTGTTACTC 58.021 41.667 0.00 0.00 37.80 2.59
2872 5123 6.013725 TCAACACTGATATTCTGGGTGTTACT 60.014 38.462 8.99 0.00 45.40 2.24
2873 5124 6.170506 TCAACACTGATATTCTGGGTGTTAC 58.829 40.000 8.99 0.00 45.40 2.50
2874 5125 6.367374 TCAACACTGATATTCTGGGTGTTA 57.633 37.500 8.99 0.00 45.40 2.41
2876 5127 4.908601 TCAACACTGATATTCTGGGTGT 57.091 40.909 0.00 0.00 41.95 4.16
2877 5128 5.188434 ACATCAACACTGATATTCTGGGTG 58.812 41.667 0.00 0.00 40.49 4.61
2878 5129 5.441718 ACATCAACACTGATATTCTGGGT 57.558 39.130 0.00 0.00 40.49 4.51
2879 5130 5.882000 TCAACATCAACACTGATATTCTGGG 59.118 40.000 0.00 0.00 40.49 4.45
2880 5131 6.990341 TCAACATCAACACTGATATTCTGG 57.010 37.500 0.00 0.00 40.49 3.86
2881 5132 6.910972 GCATCAACATCAACACTGATATTCTG 59.089 38.462 0.00 0.00 40.49 3.02
2882 5133 6.600427 TGCATCAACATCAACACTGATATTCT 59.400 34.615 0.00 0.00 40.49 2.40
2883 5134 6.788243 TGCATCAACATCAACACTGATATTC 58.212 36.000 0.00 0.00 40.49 1.75
2884 5135 6.762702 TGCATCAACATCAACACTGATATT 57.237 33.333 0.00 0.00 40.49 1.28
2885 5136 6.954487 ATGCATCAACATCAACACTGATAT 57.046 33.333 0.00 0.00 40.49 1.63
2886 5137 6.822676 TGTATGCATCAACATCAACACTGATA 59.177 34.615 0.19 0.00 40.49 2.15
2887 5138 5.648960 TGTATGCATCAACATCAACACTGAT 59.351 36.000 0.19 0.00 43.40 2.90
2888 5139 5.002516 TGTATGCATCAACATCAACACTGA 58.997 37.500 0.19 0.00 35.56 3.41
2889 5140 5.299582 TGTATGCATCAACATCAACACTG 57.700 39.130 0.19 0.00 0.00 3.66
2890 5141 5.474532 ACTTGTATGCATCAACATCAACACT 59.525 36.000 0.19 0.00 0.00 3.55
2891 5142 5.702865 ACTTGTATGCATCAACATCAACAC 58.297 37.500 0.19 0.00 0.00 3.32
2892 5143 5.106197 GGACTTGTATGCATCAACATCAACA 60.106 40.000 0.19 0.00 0.00 3.33
2893 5144 5.124457 AGGACTTGTATGCATCAACATCAAC 59.876 40.000 0.19 0.00 0.00 3.18
2894 5145 5.255687 AGGACTTGTATGCATCAACATCAA 58.744 37.500 0.19 0.31 0.00 2.57
2895 5146 4.847198 AGGACTTGTATGCATCAACATCA 58.153 39.130 0.19 0.00 0.00 3.07
2896 5147 5.824904 AAGGACTTGTATGCATCAACATC 57.175 39.130 0.19 0.00 0.00 3.06
2897 5148 5.105635 CCAAAGGACTTGTATGCATCAACAT 60.106 40.000 0.19 0.00 32.65 2.71
2907 5158 1.616994 GCTGGCCCAAAGGACTTGTAT 60.617 52.381 0.00 0.00 44.45 2.29
2916 5167 0.103937 TTTCAAACGCTGGCCCAAAG 59.896 50.000 0.00 0.00 0.00 2.77
2923 5174 2.290367 TGACAGACATTTCAAACGCTGG 59.710 45.455 0.00 0.00 0.00 4.85
2952 5204 8.578151 AGTTTAAGAAAACAGAGATACGAGTCT 58.422 33.333 4.04 0.00 46.18 3.24
2955 5207 8.744008 TCAGTTTAAGAAAACAGAGATACGAG 57.256 34.615 4.04 0.00 46.18 4.18
2970 5222 9.063615 GGGAAAAGTACATTCTTCAGTTTAAGA 57.936 33.333 10.19 0.00 33.69 2.10
2974 5226 5.538813 GGGGGAAAAGTACATTCTTCAGTTT 59.461 40.000 10.19 0.00 0.00 2.66
3011 5267 4.826274 AGCATTGAGTACTAAGAAGGCA 57.174 40.909 16.27 0.00 0.00 4.75
3030 5286 3.273919 CAGGTTGAACTGCTAACAAGC 57.726 47.619 0.00 0.00 40.69 4.01
3039 5295 1.876156 GACAAGAGGCAGGTTGAACTG 59.124 52.381 0.00 0.00 41.41 3.16
3041 5297 2.147150 GAGACAAGAGGCAGGTTGAAC 58.853 52.381 1.13 0.00 0.00 3.18
3045 5301 3.584733 AAAAGAGACAAGAGGCAGGTT 57.415 42.857 0.00 0.00 0.00 3.50
3047 5303 6.581171 AAATAAAAAGAGACAAGAGGCAGG 57.419 37.500 0.00 0.00 0.00 4.85
3073 5334 9.076781 TGATAAATGGACAAGTTGATTCTTCAA 57.923 29.630 10.54 0.00 39.54 2.69
3078 5339 9.118300 AGATCTGATAAATGGACAAGTTGATTC 57.882 33.333 10.54 0.00 0.00 2.52
3080 5341 9.118300 GAAGATCTGATAAATGGACAAGTTGAT 57.882 33.333 10.54 0.00 0.00 2.57
3082 5343 8.503458 AGAAGATCTGATAAATGGACAAGTTG 57.497 34.615 0.00 0.00 0.00 3.16
3083 5344 9.525826 AAAGAAGATCTGATAAATGGACAAGTT 57.474 29.630 0.00 0.00 0.00 2.66
3086 5347 9.388506 GAGAAAGAAGATCTGATAAATGGACAA 57.611 33.333 0.00 0.00 0.00 3.18
3103 5364 7.587037 AGATAGGTGATCTCTGAGAAAGAAG 57.413 40.000 12.00 0.00 41.37 2.85
3106 5367 7.587037 AGAAGATAGGTGATCTCTGAGAAAG 57.413 40.000 12.00 0.00 44.68 2.62
3139 5404 9.476202 GGAAACCCATGTATATTTGCTAAATTC 57.524 33.333 0.00 0.00 32.38 2.17
3143 5408 7.122715 ACAGGAAACCCATGTATATTTGCTAA 58.877 34.615 0.00 0.00 31.83 3.09
3157 5422 8.485578 AACAAAATATAGAAACAGGAAACCCA 57.514 30.769 0.00 0.00 0.00 4.51
3175 5440 8.081633 TCATTTCATCGTCAGCTAAAACAAAAT 58.918 29.630 0.00 0.00 0.00 1.82
3203 5469 2.475155 TCAGCAAGGAGGATGATCTGT 58.525 47.619 0.00 0.00 0.00 3.41
3220 5486 3.521560 TCGGCTACAACTTGCTAATCAG 58.478 45.455 0.00 0.00 0.00 2.90
3224 5490 4.517453 ACAAAATCGGCTACAACTTGCTAA 59.483 37.500 0.00 0.00 0.00 3.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.