Multiple sequence alignment - TraesCS3A01G464800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G464800 chr3A 100.000 3438 0 0 1 3438 699520305 699523742 0.000000e+00 6349.0
1 TraesCS3A01G464800 chr3A 88.034 117 13 1 632 748 750102089 750102204 1.660000e-28 137.0
2 TraesCS3A01G464800 chr3A 87.963 108 12 1 632 739 750081283 750081389 3.600000e-25 126.0
3 TraesCS3A01G464800 chr3B 84.619 2035 167 58 498 2467 753174812 753172859 0.000000e+00 1890.0
4 TraesCS3A01G464800 chr3B 85.714 721 84 11 2729 3436 753172862 753172148 0.000000e+00 743.0
5 TraesCS3A01G464800 chr3B 86.047 301 37 5 2127 2423 755478788 755478489 5.540000e-83 318.0
6 TraesCS3A01G464800 chr3B 85.714 301 38 5 2127 2423 254192882 254193181 2.580000e-81 313.0
7 TraesCS3A01G464800 chr3B 77.749 382 69 10 84 458 753198190 753197818 1.610000e-53 220.0
8 TraesCS3A01G464800 chr3D 89.925 1340 85 27 662 1994 565037323 565038619 0.000000e+00 1681.0
9 TraesCS3A01G464800 chr3D 85.444 900 98 19 2548 3435 565051752 565052630 0.000000e+00 905.0
10 TraesCS3A01G464800 chr3D 95.312 64 3 0 2078 2141 565038677 565038740 6.070000e-18 102.0
11 TraesCS3A01G464800 chr1D 86.622 299 33 6 2130 2423 226450032 226449736 1.190000e-84 324.0
12 TraesCS3A01G464800 chr1D 91.667 48 4 0 1998 2045 12067483 12067436 2.210000e-07 67.6
13 TraesCS3A01G464800 chr1D 90.385 52 4 1 1987 2038 350155609 350155559 2.210000e-07 67.6
14 TraesCS3A01G464800 chr1D 97.059 34 0 1 178 211 361518985 361518953 4.790000e-04 56.5
15 TraesCS3A01G464800 chr4A 86.047 301 37 4 2127 2423 166730259 166729960 5.540000e-83 318.0
16 TraesCS3A01G464800 chr5D 85.714 301 37 5 2127 2423 201312270 201311972 2.580000e-81 313.0
17 TraesCS3A01G464800 chr5D 93.617 47 3 0 1992 2038 135711690 135711736 1.710000e-08 71.3
18 TraesCS3A01G464800 chr4B 85.714 301 38 5 2127 2423 471308140 471307841 2.580000e-81 313.0
19 TraesCS3A01G464800 chr4B 86.735 98 10 3 1301 1398 658966977 658967071 4.690000e-19 106.0
20 TraesCS3A01G464800 chr7D 85.714 301 35 7 2128 2423 64180763 64181060 9.260000e-81 311.0
21 TraesCS3A01G464800 chr7D 90.909 55 3 2 1986 2038 164195900 164195954 4.760000e-09 73.1
22 TraesCS3A01G464800 chr1B 84.762 315 40 8 2127 2436 555630526 555630215 3.330000e-80 309.0
23 TraesCS3A01G464800 chr7B 85.382 301 39 4 2127 2423 559265051 559264752 1.200000e-79 307.0
24 TraesCS3A01G464800 chr4D 78.199 211 32 10 1205 1408 112197199 112196996 4.660000e-24 122.0
25 TraesCS3A01G464800 chr4D 95.918 49 1 1 1986 2034 665352 665399 1.020000e-10 78.7
26 TraesCS3A01G464800 chr6B 97.619 42 1 0 1997 2038 649829319 649829278 4.760000e-09 73.1
27 TraesCS3A01G464800 chr6D 93.617 47 3 0 1992 2038 291236926 291236972 1.710000e-08 71.3
28 TraesCS3A01G464800 chr1A 93.617 47 2 1 1987 2033 320523103 320523058 6.160000e-08 69.4
29 TraesCS3A01G464800 chr7A 80.000 95 14 3 2615 2705 519128184 519128277 7.960000e-07 65.8
30 TraesCS3A01G464800 chr5A 97.059 34 0 1 178 211 702974363 702974395 4.790000e-04 56.5
31 TraesCS3A01G464800 chr2D 88.636 44 4 1 169 212 572267313 572267271 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G464800 chr3A 699520305 699523742 3437 False 6349.0 6349 100.0000 1 3438 1 chr3A.!!$F1 3437
1 TraesCS3A01G464800 chr3B 753172148 753174812 2664 True 1316.5 1890 85.1665 498 3436 2 chr3B.!!$R3 2938
2 TraesCS3A01G464800 chr3D 565051752 565052630 878 False 905.0 905 85.4440 2548 3435 1 chr3D.!!$F1 887
3 TraesCS3A01G464800 chr3D 565037323 565038740 1417 False 891.5 1681 92.6185 662 2141 2 chr3D.!!$F2 1479

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
32 33 0.039978 ACGACGACTGCAACTCTGAG 60.040 55.0 0.00 2.45 0.00 3.35 F
457 458 0.103572 CGACCCCTATGTTACACGGG 59.896 60.0 12.91 12.91 39.85 5.28 F
1011 1043 0.107456 ATCCAGTAATGGAGGCAGCG 59.893 55.0 18.08 0.00 41.88 5.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1152 1184 0.735632 CTCTGCGACACTCTGCTTCC 60.736 60.0 0.00 0.00 0.00 3.46 R
2434 2527 0.468214 TGTCGTGGGCCCAAAATCAA 60.468 50.0 30.64 7.63 0.00 2.57 R
2543 2636 0.321034 TACTGCAGGCTGAGCAAGTG 60.321 55.0 20.86 1.16 42.17 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.713288 TCAAAGTTCAATGACGACGACT 58.287 40.909 0.00 0.00 0.00 4.18
22 23 3.489416 TCAAAGTTCAATGACGACGACTG 59.511 43.478 0.00 0.00 0.00 3.51
23 24 1.419374 AGTTCAATGACGACGACTGC 58.581 50.000 0.00 0.00 0.00 4.40
24 25 1.136690 GTTCAATGACGACGACTGCA 58.863 50.000 0.00 0.00 0.00 4.41
25 26 1.525197 GTTCAATGACGACGACTGCAA 59.475 47.619 0.00 0.00 0.00 4.08
26 27 1.136690 TCAATGACGACGACTGCAAC 58.863 50.000 0.00 0.00 0.00 4.17
27 28 1.139989 CAATGACGACGACTGCAACT 58.860 50.000 0.00 0.00 0.00 3.16
28 29 1.125021 CAATGACGACGACTGCAACTC 59.875 52.381 0.00 0.00 0.00 3.01
29 30 0.598562 ATGACGACGACTGCAACTCT 59.401 50.000 0.00 0.00 0.00 3.24
30 31 0.317854 TGACGACGACTGCAACTCTG 60.318 55.000 0.00 0.00 0.00 3.35
31 32 0.040336 GACGACGACTGCAACTCTGA 60.040 55.000 0.00 0.00 0.00 3.27
32 33 0.039978 ACGACGACTGCAACTCTGAG 60.040 55.000 0.00 2.45 0.00 3.35
33 34 0.238553 CGACGACTGCAACTCTGAGA 59.761 55.000 12.44 0.00 0.00 3.27
34 35 1.135546 CGACGACTGCAACTCTGAGAT 60.136 52.381 12.44 0.00 0.00 2.75
35 36 2.257894 GACGACTGCAACTCTGAGATG 58.742 52.381 12.44 11.23 0.00 2.90
36 37 1.889170 ACGACTGCAACTCTGAGATGA 59.111 47.619 17.82 3.65 0.00 2.92
37 38 2.495270 ACGACTGCAACTCTGAGATGAT 59.505 45.455 17.82 3.27 0.00 2.45
38 39 3.056250 ACGACTGCAACTCTGAGATGATT 60.056 43.478 17.82 1.74 0.00 2.57
39 40 3.306434 CGACTGCAACTCTGAGATGATTG 59.694 47.826 17.82 9.70 0.00 2.67
40 41 4.252073 GACTGCAACTCTGAGATGATTGT 58.748 43.478 17.82 11.82 0.00 2.71
41 42 4.252073 ACTGCAACTCTGAGATGATTGTC 58.748 43.478 17.82 6.28 0.00 3.18
42 43 3.603532 TGCAACTCTGAGATGATTGTCC 58.396 45.455 17.82 0.92 0.00 4.02
43 44 3.262660 TGCAACTCTGAGATGATTGTCCT 59.737 43.478 17.82 0.00 0.00 3.85
44 45 4.467438 TGCAACTCTGAGATGATTGTCCTA 59.533 41.667 17.82 0.00 0.00 2.94
45 46 5.049167 GCAACTCTGAGATGATTGTCCTAG 58.951 45.833 17.82 0.00 0.00 3.02
46 47 5.599732 CAACTCTGAGATGATTGTCCTAGG 58.400 45.833 12.44 0.82 0.00 3.02
47 48 4.222336 ACTCTGAGATGATTGTCCTAGGG 58.778 47.826 12.44 0.00 0.00 3.53
48 49 4.078922 ACTCTGAGATGATTGTCCTAGGGA 60.079 45.833 12.44 0.00 0.00 4.20
61 62 4.730949 TCCTAGGGACATGTAAACGAAG 57.269 45.455 9.46 0.00 0.00 3.79
62 63 4.346730 TCCTAGGGACATGTAAACGAAGA 58.653 43.478 9.46 0.00 0.00 2.87
63 64 4.159135 TCCTAGGGACATGTAAACGAAGAC 59.841 45.833 9.46 0.00 0.00 3.01
64 65 4.159879 CCTAGGGACATGTAAACGAAGACT 59.840 45.833 0.00 0.00 0.00 3.24
65 66 4.618920 AGGGACATGTAAACGAAGACTT 57.381 40.909 0.00 0.00 0.00 3.01
66 67 4.969484 AGGGACATGTAAACGAAGACTTT 58.031 39.130 0.00 0.00 0.00 2.66
67 68 4.995487 AGGGACATGTAAACGAAGACTTTC 59.005 41.667 0.00 0.00 0.00 2.62
68 69 4.153655 GGGACATGTAAACGAAGACTTTCC 59.846 45.833 0.00 0.00 0.00 3.13
69 70 4.753107 GGACATGTAAACGAAGACTTTCCA 59.247 41.667 0.00 0.00 0.00 3.53
70 71 5.107065 GGACATGTAAACGAAGACTTTCCAG 60.107 44.000 0.00 0.00 0.00 3.86
71 72 5.365619 ACATGTAAACGAAGACTTTCCAGT 58.634 37.500 0.00 0.00 35.17 4.00
72 73 5.820947 ACATGTAAACGAAGACTTTCCAGTT 59.179 36.000 0.00 0.00 31.22 3.16
73 74 5.728351 TGTAAACGAAGACTTTCCAGTTG 57.272 39.130 0.00 0.00 31.22 3.16
74 75 5.180271 TGTAAACGAAGACTTTCCAGTTGT 58.820 37.500 0.00 0.00 31.22 3.32
75 76 4.877323 AAACGAAGACTTTCCAGTTGTC 57.123 40.909 0.00 0.00 31.22 3.18
76 77 2.835027 ACGAAGACTTTCCAGTTGTCC 58.165 47.619 0.00 0.00 31.22 4.02
77 78 2.434702 ACGAAGACTTTCCAGTTGTCCT 59.565 45.455 0.00 0.00 31.22 3.85
78 79 3.118371 ACGAAGACTTTCCAGTTGTCCTT 60.118 43.478 0.00 0.00 31.22 3.36
79 80 3.248602 CGAAGACTTTCCAGTTGTCCTTG 59.751 47.826 0.00 0.00 31.22 3.61
80 81 4.451900 GAAGACTTTCCAGTTGTCCTTGA 58.548 43.478 0.00 0.00 31.22 3.02
81 82 3.809905 AGACTTTCCAGTTGTCCTTGAC 58.190 45.455 0.00 0.00 31.22 3.18
82 83 3.199946 AGACTTTCCAGTTGTCCTTGACA 59.800 43.478 0.00 0.00 41.09 3.58
90 91 2.638480 TTGTCCTTGACAAGGTGAGG 57.362 50.000 29.23 8.84 45.88 3.86
91 92 1.843851 TTGTCCTTGACAAGGTGAGGT 59.156 47.619 29.23 0.00 45.88 3.85
92 93 2.158813 TTGTCCTTGACAAGGTGAGGTC 60.159 50.000 29.23 15.73 45.88 3.85
93 94 3.217242 CCTTGACAAGGTGAGGTCG 57.783 57.895 23.92 0.00 43.95 4.79
94 95 0.679505 CCTTGACAAGGTGAGGTCGA 59.320 55.000 23.92 0.00 43.95 4.20
95 96 1.276421 CCTTGACAAGGTGAGGTCGAT 59.724 52.381 23.92 0.00 43.95 3.59
96 97 2.289694 CCTTGACAAGGTGAGGTCGATT 60.290 50.000 23.92 0.00 43.95 3.34
97 98 2.743636 TGACAAGGTGAGGTCGATTC 57.256 50.000 0.00 0.00 36.83 2.52
98 99 1.275291 TGACAAGGTGAGGTCGATTCC 59.725 52.381 0.00 0.00 36.83 3.01
99 100 1.275291 GACAAGGTGAGGTCGATTCCA 59.725 52.381 0.00 0.00 0.00 3.53
100 101 1.276421 ACAAGGTGAGGTCGATTCCAG 59.724 52.381 0.00 0.00 0.00 3.86
101 102 0.250513 AAGGTGAGGTCGATTCCAGC 59.749 55.000 0.00 0.00 0.00 4.85
102 103 0.616111 AGGTGAGGTCGATTCCAGCT 60.616 55.000 8.95 8.95 33.17 4.24
103 104 0.460987 GGTGAGGTCGATTCCAGCTG 60.461 60.000 6.78 6.78 0.00 4.24
104 105 0.460987 GTGAGGTCGATTCCAGCTGG 60.461 60.000 27.87 27.87 0.00 4.85
105 106 1.144936 GAGGTCGATTCCAGCTGGG 59.855 63.158 32.23 16.40 35.41 4.45
106 107 2.190578 GGTCGATTCCAGCTGGGG 59.809 66.667 32.23 18.45 37.22 4.96
107 108 2.367202 GGTCGATTCCAGCTGGGGA 61.367 63.158 32.23 21.17 37.22 4.81
108 109 1.144936 GTCGATTCCAGCTGGGGAG 59.855 63.158 32.23 20.06 38.42 4.30
109 110 2.203126 CGATTCCAGCTGGGGAGC 60.203 66.667 32.23 21.67 38.42 4.70
110 111 2.203126 GATTCCAGCTGGGGAGCG 60.203 66.667 32.23 5.95 38.42 5.03
111 112 2.688666 ATTCCAGCTGGGGAGCGA 60.689 61.111 32.23 9.40 38.42 4.93
112 113 2.657102 GATTCCAGCTGGGGAGCGAG 62.657 65.000 32.23 4.34 38.42 5.03
115 116 4.154347 CAGCTGGGGAGCGAGGAC 62.154 72.222 5.57 0.00 40.27 3.85
116 117 4.704103 AGCTGGGGAGCGAGGACA 62.704 66.667 0.00 0.00 40.27 4.02
117 118 3.706373 GCTGGGGAGCGAGGACAA 61.706 66.667 0.00 0.00 0.00 3.18
118 119 3.036429 GCTGGGGAGCGAGGACAAT 62.036 63.158 0.00 0.00 0.00 2.71
119 120 1.153289 CTGGGGAGCGAGGACAATG 60.153 63.158 0.00 0.00 0.00 2.82
120 121 2.190578 GGGGAGCGAGGACAATGG 59.809 66.667 0.00 0.00 0.00 3.16
121 122 2.514824 GGGAGCGAGGACAATGGC 60.515 66.667 0.00 0.00 0.00 4.40
122 123 2.892425 GGAGCGAGGACAATGGCG 60.892 66.667 0.00 0.00 0.00 5.69
123 124 2.892425 GAGCGAGGACAATGGCGG 60.892 66.667 0.00 0.00 0.00 6.13
124 125 4.473520 AGCGAGGACAATGGCGGG 62.474 66.667 0.00 0.00 0.00 6.13
125 126 4.778143 GCGAGGACAATGGCGGGT 62.778 66.667 0.00 0.00 0.00 5.28
126 127 2.511600 CGAGGACAATGGCGGGTC 60.512 66.667 0.00 0.00 0.00 4.46
127 128 2.511600 GAGGACAATGGCGGGTCG 60.512 66.667 0.00 0.00 34.87 4.79
128 129 3.000819 AGGACAATGGCGGGTCGA 61.001 61.111 0.00 0.00 34.87 4.20
129 130 2.818274 GGACAATGGCGGGTCGAC 60.818 66.667 7.13 7.13 34.87 4.20
130 131 3.186047 GACAATGGCGGGTCGACG 61.186 66.667 9.92 0.00 37.93 5.12
131 132 4.752879 ACAATGGCGGGTCGACGG 62.753 66.667 9.92 5.12 37.93 4.79
137 138 4.814294 GCGGGTCGACGGCTCATT 62.814 66.667 19.33 0.00 41.72 2.57
138 139 2.582498 CGGGTCGACGGCTCATTC 60.582 66.667 9.92 0.00 0.00 2.67
139 140 2.893398 GGGTCGACGGCTCATTCT 59.107 61.111 9.92 0.00 0.00 2.40
140 141 1.721664 CGGGTCGACGGCTCATTCTA 61.722 60.000 9.92 0.00 0.00 2.10
141 142 0.458669 GGGTCGACGGCTCATTCTAA 59.541 55.000 9.92 0.00 0.00 2.10
142 143 1.068741 GGGTCGACGGCTCATTCTAAT 59.931 52.381 9.92 0.00 0.00 1.73
143 144 2.128035 GGTCGACGGCTCATTCTAATG 58.872 52.381 9.92 0.00 37.75 1.90
144 145 2.128035 GTCGACGGCTCATTCTAATGG 58.872 52.381 0.00 0.00 37.03 3.16
145 146 0.861837 CGACGGCTCATTCTAATGGC 59.138 55.000 3.00 5.50 37.03 4.40
146 147 1.806247 CGACGGCTCATTCTAATGGCA 60.806 52.381 14.12 0.00 37.03 4.92
147 148 2.288666 GACGGCTCATTCTAATGGCAA 58.711 47.619 14.12 0.00 37.03 4.52
148 149 2.017049 ACGGCTCATTCTAATGGCAAC 58.983 47.619 14.12 2.63 37.03 4.17
162 163 0.502275 GGCAACAATTGTCGTTTGCG 59.498 50.000 20.88 4.22 39.92 4.85
163 164 0.502275 GCAACAATTGTCGTTTGCGG 59.498 50.000 12.39 0.00 38.89 5.69
164 165 1.833860 CAACAATTGTCGTTTGCGGT 58.166 45.000 12.39 0.00 38.89 5.68
165 166 2.189342 CAACAATTGTCGTTTGCGGTT 58.811 42.857 12.39 0.00 38.89 4.44
166 167 2.113910 ACAATTGTCGTTTGCGGTTC 57.886 45.000 4.92 0.00 38.89 3.62
167 168 1.402259 ACAATTGTCGTTTGCGGTTCA 59.598 42.857 4.92 0.00 38.89 3.18
168 169 2.159366 ACAATTGTCGTTTGCGGTTCAA 60.159 40.909 4.92 0.00 38.89 2.69
169 170 2.853731 ATTGTCGTTTGCGGTTCAAA 57.146 40.000 0.00 0.00 42.01 2.69
170 171 2.181426 TTGTCGTTTGCGGTTCAAAG 57.819 45.000 0.00 0.00 44.59 2.77
171 172 1.370609 TGTCGTTTGCGGTTCAAAGA 58.629 45.000 0.00 0.00 44.59 2.52
172 173 1.062880 TGTCGTTTGCGGTTCAAAGAC 59.937 47.619 0.00 0.00 44.59 3.01
173 174 0.658897 TCGTTTGCGGTTCAAAGACC 59.341 50.000 0.00 0.00 44.59 3.85
174 175 0.661020 CGTTTGCGGTTCAAAGACCT 59.339 50.000 0.00 0.00 44.59 3.85
175 176 1.064952 CGTTTGCGGTTCAAAGACCTT 59.935 47.619 0.00 0.00 44.59 3.50
176 177 2.459934 GTTTGCGGTTCAAAGACCTTG 58.540 47.619 0.00 0.00 44.59 3.61
177 178 2.045561 TTGCGGTTCAAAGACCTTGA 57.954 45.000 0.00 0.00 42.48 3.02
178 179 2.270352 TGCGGTTCAAAGACCTTGAT 57.730 45.000 0.00 0.00 43.64 2.57
179 180 1.879380 TGCGGTTCAAAGACCTTGATG 59.121 47.619 0.00 0.00 43.64 3.07
180 181 1.880027 GCGGTTCAAAGACCTTGATGT 59.120 47.619 0.00 0.00 43.64 3.06
181 182 3.071479 GCGGTTCAAAGACCTTGATGTA 58.929 45.455 0.00 0.00 43.64 2.29
182 183 3.500680 GCGGTTCAAAGACCTTGATGTAA 59.499 43.478 0.00 0.00 43.64 2.41
183 184 4.156008 GCGGTTCAAAGACCTTGATGTAAT 59.844 41.667 0.00 0.00 43.64 1.89
184 185 5.335661 GCGGTTCAAAGACCTTGATGTAATT 60.336 40.000 0.00 0.00 43.64 1.40
185 186 6.677913 CGGTTCAAAGACCTTGATGTAATTT 58.322 36.000 0.00 0.00 43.64 1.82
186 187 7.145323 CGGTTCAAAGACCTTGATGTAATTTT 58.855 34.615 0.00 0.00 43.64 1.82
187 188 7.651704 CGGTTCAAAGACCTTGATGTAATTTTT 59.348 33.333 0.00 0.00 43.64 1.94
188 189 9.974980 GGTTCAAAGACCTTGATGTAATTTTTA 57.025 29.630 0.00 0.00 43.64 1.52
203 204 9.730420 ATGTAATTTTTATTATGTTCGAGGTGC 57.270 29.630 0.00 0.00 0.00 5.01
204 205 8.952278 TGTAATTTTTATTATGTTCGAGGTGCT 58.048 29.630 0.00 0.00 0.00 4.40
205 206 9.783256 GTAATTTTTATTATGTTCGAGGTGCTT 57.217 29.630 0.00 0.00 0.00 3.91
207 208 9.705290 AATTTTTATTATGTTCGAGGTGCTTTT 57.295 25.926 0.00 0.00 0.00 2.27
208 209 8.514136 TTTTTATTATGTTCGAGGTGCTTTTG 57.486 30.769 0.00 0.00 0.00 2.44
209 210 6.811253 TTATTATGTTCGAGGTGCTTTTGT 57.189 33.333 0.00 0.00 0.00 2.83
210 211 7.908827 TTATTATGTTCGAGGTGCTTTTGTA 57.091 32.000 0.00 0.00 0.00 2.41
211 212 8.500753 TTATTATGTTCGAGGTGCTTTTGTAT 57.499 30.769 0.00 0.00 0.00 2.29
212 213 4.685169 ATGTTCGAGGTGCTTTTGTATG 57.315 40.909 0.00 0.00 0.00 2.39
213 214 3.734463 TGTTCGAGGTGCTTTTGTATGA 58.266 40.909 0.00 0.00 0.00 2.15
214 215 4.323417 TGTTCGAGGTGCTTTTGTATGAT 58.677 39.130 0.00 0.00 0.00 2.45
215 216 4.759693 TGTTCGAGGTGCTTTTGTATGATT 59.240 37.500 0.00 0.00 0.00 2.57
216 217 4.944962 TCGAGGTGCTTTTGTATGATTG 57.055 40.909 0.00 0.00 0.00 2.67
217 218 4.323417 TCGAGGTGCTTTTGTATGATTGT 58.677 39.130 0.00 0.00 0.00 2.71
218 219 5.483811 TCGAGGTGCTTTTGTATGATTGTA 58.516 37.500 0.00 0.00 0.00 2.41
219 220 6.112734 TCGAGGTGCTTTTGTATGATTGTAT 58.887 36.000 0.00 0.00 0.00 2.29
220 221 6.597672 TCGAGGTGCTTTTGTATGATTGTATT 59.402 34.615 0.00 0.00 0.00 1.89
221 222 7.120579 TCGAGGTGCTTTTGTATGATTGTATTT 59.879 33.333 0.00 0.00 0.00 1.40
222 223 7.218773 CGAGGTGCTTTTGTATGATTGTATTTG 59.781 37.037 0.00 0.00 0.00 2.32
223 224 7.895759 AGGTGCTTTTGTATGATTGTATTTGT 58.104 30.769 0.00 0.00 0.00 2.83
224 225 7.814107 AGGTGCTTTTGTATGATTGTATTTGTG 59.186 33.333 0.00 0.00 0.00 3.33
225 226 7.063308 GGTGCTTTTGTATGATTGTATTTGTGG 59.937 37.037 0.00 0.00 0.00 4.17
226 227 7.598493 GTGCTTTTGTATGATTGTATTTGTGGT 59.402 33.333 0.00 0.00 0.00 4.16
227 228 8.797438 TGCTTTTGTATGATTGTATTTGTGGTA 58.203 29.630 0.00 0.00 0.00 3.25
228 229 9.632807 GCTTTTGTATGATTGTATTTGTGGTAA 57.367 29.630 0.00 0.00 0.00 2.85
233 234 9.915629 TGTATGATTGTATTTGTGGTAAAAACC 57.084 29.630 0.00 0.00 0.00 3.27
294 295 8.262715 AGTTATTGGTTTTCAACACAAAAAGG 57.737 30.769 0.00 0.00 38.31 3.11
295 296 8.097662 AGTTATTGGTTTTCAACACAAAAAGGA 58.902 29.630 0.00 0.00 38.31 3.36
296 297 8.722394 GTTATTGGTTTTCAACACAAAAAGGAA 58.278 29.630 0.00 0.00 38.31 3.36
297 298 7.751768 ATTGGTTTTCAACACAAAAAGGAAA 57.248 28.000 0.00 0.00 38.31 3.13
298 299 6.546972 TGGTTTTCAACACAAAAAGGAAAC 57.453 33.333 0.00 0.00 0.00 2.78
299 300 6.055588 TGGTTTTCAACACAAAAAGGAAACA 58.944 32.000 0.00 0.00 0.00 2.83
300 301 6.542370 TGGTTTTCAACACAAAAAGGAAACAA 59.458 30.769 0.00 0.00 0.00 2.83
301 302 7.067008 TGGTTTTCAACACAAAAAGGAAACAAA 59.933 29.630 0.00 0.00 0.00 2.83
302 303 7.589587 GGTTTTCAACACAAAAAGGAAACAAAG 59.410 33.333 0.00 0.00 0.00 2.77
303 304 6.793492 TTCAACACAAAAAGGAAACAAAGG 57.207 33.333 0.00 0.00 0.00 3.11
304 305 6.102897 TCAACACAAAAAGGAAACAAAGGA 57.897 33.333 0.00 0.00 0.00 3.36
305 306 6.525629 TCAACACAAAAAGGAAACAAAGGAA 58.474 32.000 0.00 0.00 0.00 3.36
306 307 6.992715 TCAACACAAAAAGGAAACAAAGGAAA 59.007 30.769 0.00 0.00 0.00 3.13
307 308 7.499232 TCAACACAAAAAGGAAACAAAGGAAAA 59.501 29.630 0.00 0.00 0.00 2.29
308 309 7.809546 ACACAAAAAGGAAACAAAGGAAAAA 57.190 28.000 0.00 0.00 0.00 1.94
332 333 2.350192 TGCACCGATTTTGCATACTACG 59.650 45.455 0.00 0.00 45.06 3.51
333 334 2.286184 GCACCGATTTTGCATACTACGG 60.286 50.000 14.79 14.79 43.61 4.02
334 335 2.286833 CACCGATTTTGCATACTACGGG 59.713 50.000 18.54 5.38 42.54 5.28
335 336 1.263217 CCGATTTTGCATACTACGGGC 59.737 52.381 10.49 0.00 36.08 6.13
336 337 1.263217 CGATTTTGCATACTACGGGCC 59.737 52.381 0.00 0.00 0.00 5.80
337 338 2.294074 GATTTTGCATACTACGGGCCA 58.706 47.619 4.39 0.00 0.00 5.36
338 339 1.745232 TTTTGCATACTACGGGCCAG 58.255 50.000 4.39 1.85 0.00 4.85
339 340 0.906066 TTTGCATACTACGGGCCAGA 59.094 50.000 10.86 0.00 0.00 3.86
340 341 0.177141 TTGCATACTACGGGCCAGAC 59.823 55.000 10.86 0.00 0.00 3.51
341 342 1.069258 GCATACTACGGGCCAGACC 59.931 63.158 10.86 0.00 37.93 3.85
342 343 1.400530 GCATACTACGGGCCAGACCT 61.401 60.000 10.86 0.00 39.10 3.85
352 353 4.023137 CCAGACCTGGCCAAATGG 57.977 61.111 7.01 7.56 44.73 3.16
353 354 1.683365 CCAGACCTGGCCAAATGGG 60.683 63.158 7.01 7.12 44.73 4.00
370 371 4.813235 GCAGCCCGGCCATGGTTA 62.813 66.667 14.67 0.00 0.00 2.85
371 372 2.195683 CAGCCCGGCCATGGTTAT 59.804 61.111 14.67 0.00 0.00 1.89
372 373 1.454104 CAGCCCGGCCATGGTTATA 59.546 57.895 14.67 0.00 0.00 0.98
373 374 0.889186 CAGCCCGGCCATGGTTATAC 60.889 60.000 14.67 0.64 0.00 1.47
374 375 1.149627 GCCCGGCCATGGTTATACA 59.850 57.895 14.67 0.00 0.00 2.29
375 376 1.170290 GCCCGGCCATGGTTATACAC 61.170 60.000 14.67 0.00 0.00 2.90
376 377 0.181587 CCCGGCCATGGTTATACACA 59.818 55.000 14.67 0.00 0.00 3.72
377 378 1.593196 CCGGCCATGGTTATACACAG 58.407 55.000 14.67 0.00 0.00 3.66
378 379 1.593196 CGGCCATGGTTATACACAGG 58.407 55.000 14.67 0.00 0.00 4.00
379 380 1.140052 CGGCCATGGTTATACACAGGA 59.860 52.381 14.67 0.00 0.00 3.86
380 381 2.420827 CGGCCATGGTTATACACAGGAA 60.421 50.000 14.67 0.00 0.00 3.36
381 382 3.214328 GGCCATGGTTATACACAGGAAG 58.786 50.000 14.67 0.00 0.00 3.46
382 383 3.214328 GCCATGGTTATACACAGGAAGG 58.786 50.000 14.67 0.00 0.00 3.46
383 384 3.214328 CCATGGTTATACACAGGAAGGC 58.786 50.000 2.57 0.00 0.00 4.35
384 385 3.371487 CCATGGTTATACACAGGAAGGCA 60.371 47.826 2.57 0.00 0.00 4.75
385 386 3.343941 TGGTTATACACAGGAAGGCAC 57.656 47.619 0.00 0.00 0.00 5.01
386 387 2.277084 GGTTATACACAGGAAGGCACG 58.723 52.381 0.00 0.00 0.00 5.34
387 388 2.093869 GGTTATACACAGGAAGGCACGA 60.094 50.000 0.00 0.00 0.00 4.35
388 389 2.928116 GTTATACACAGGAAGGCACGAC 59.072 50.000 0.00 0.00 0.00 4.34
389 390 0.973632 ATACACAGGAAGGCACGACA 59.026 50.000 0.00 0.00 0.00 4.35
390 391 0.753867 TACACAGGAAGGCACGACAA 59.246 50.000 0.00 0.00 0.00 3.18
391 392 0.532862 ACACAGGAAGGCACGACAAG 60.533 55.000 0.00 0.00 0.00 3.16
392 393 0.532862 CACAGGAAGGCACGACAAGT 60.533 55.000 0.00 0.00 0.00 3.16
400 401 2.562912 CACGACAAGTGCATGGGC 59.437 61.111 0.00 0.00 44.72 5.36
401 402 2.672996 ACGACAAGTGCATGGGCC 60.673 61.111 0.00 0.00 40.13 5.80
402 403 3.803082 CGACAAGTGCATGGGCCG 61.803 66.667 0.00 0.00 40.13 6.13
403 404 3.443045 GACAAGTGCATGGGCCGG 61.443 66.667 0.00 0.00 40.13 6.13
418 419 4.988598 CGGGCCGACACACTTGCT 62.989 66.667 24.41 0.00 0.00 3.91
419 420 2.345991 GGGCCGACACACTTGCTA 59.654 61.111 0.00 0.00 0.00 3.49
420 421 2.033194 GGGCCGACACACTTGCTAC 61.033 63.158 0.00 0.00 0.00 3.58
421 422 2.033194 GGCCGACACACTTGCTACC 61.033 63.158 0.00 0.00 0.00 3.18
422 423 2.033194 GCCGACACACTTGCTACCC 61.033 63.158 0.00 0.00 0.00 3.69
423 424 1.671742 CCGACACACTTGCTACCCT 59.328 57.895 0.00 0.00 0.00 4.34
424 425 0.389948 CCGACACACTTGCTACCCTC 60.390 60.000 0.00 0.00 0.00 4.30
425 426 0.389948 CGACACACTTGCTACCCTCC 60.390 60.000 0.00 0.00 0.00 4.30
426 427 0.977395 GACACACTTGCTACCCTCCT 59.023 55.000 0.00 0.00 0.00 3.69
427 428 1.348036 GACACACTTGCTACCCTCCTT 59.652 52.381 0.00 0.00 0.00 3.36
428 429 1.072331 ACACACTTGCTACCCTCCTTG 59.928 52.381 0.00 0.00 0.00 3.61
429 430 0.693049 ACACTTGCTACCCTCCTTGG 59.307 55.000 0.00 0.00 0.00 3.61
430 431 0.693049 CACTTGCTACCCTCCTTGGT 59.307 55.000 0.00 0.00 42.62 3.67
431 432 0.984995 ACTTGCTACCCTCCTTGGTC 59.015 55.000 0.00 0.00 39.91 4.02
432 433 0.108138 CTTGCTACCCTCCTTGGTCG 60.108 60.000 0.00 0.00 39.91 4.79
433 434 0.543410 TTGCTACCCTCCTTGGTCGA 60.543 55.000 0.00 0.00 39.91 4.20
434 435 1.255667 TGCTACCCTCCTTGGTCGAC 61.256 60.000 7.13 7.13 39.91 4.20
435 436 1.807886 CTACCCTCCTTGGTCGACG 59.192 63.158 9.92 0.00 39.91 5.12
436 437 2.280823 CTACCCTCCTTGGTCGACGC 62.281 65.000 9.92 3.20 39.91 5.19
437 438 3.691342 CCCTCCTTGGTCGACGCA 61.691 66.667 9.92 6.05 0.00 5.24
438 439 2.432628 CCTCCTTGGTCGACGCAC 60.433 66.667 9.92 0.00 0.00 5.34
439 440 2.805353 CTCCTTGGTCGACGCACG 60.805 66.667 9.92 6.52 44.09 5.34
447 448 2.438975 TCGACGCACGACCCCTAT 60.439 61.111 0.00 0.00 46.45 2.57
448 449 2.278596 CGACGCACGACCCCTATG 60.279 66.667 0.00 0.00 45.77 2.23
449 450 2.890371 GACGCACGACCCCTATGT 59.110 61.111 0.00 0.00 0.00 2.29
450 451 1.217244 GACGCACGACCCCTATGTT 59.783 57.895 0.00 0.00 0.00 2.71
451 452 0.457035 GACGCACGACCCCTATGTTA 59.543 55.000 0.00 0.00 0.00 2.41
452 453 0.174162 ACGCACGACCCCTATGTTAC 59.826 55.000 0.00 0.00 0.00 2.50
453 454 0.173935 CGCACGACCCCTATGTTACA 59.826 55.000 0.00 0.00 0.00 2.41
454 455 1.648504 GCACGACCCCTATGTTACAC 58.351 55.000 0.00 0.00 0.00 2.90
455 456 1.917273 CACGACCCCTATGTTACACG 58.083 55.000 0.00 0.00 0.00 4.49
456 457 0.819582 ACGACCCCTATGTTACACGG 59.180 55.000 0.00 0.00 0.00 4.94
457 458 0.103572 CGACCCCTATGTTACACGGG 59.896 60.000 12.91 12.91 39.85 5.28
458 459 3.404636 ACCCCTATGTTACACGGGT 57.595 52.632 16.93 14.71 42.35 5.28
459 460 1.660242 ACCCCTATGTTACACGGGTT 58.340 50.000 16.93 3.81 44.89 4.11
460 461 1.279846 ACCCCTATGTTACACGGGTTG 59.720 52.381 16.93 8.01 44.89 3.77
461 462 1.407712 CCCCTATGTTACACGGGTTGG 60.408 57.143 16.93 4.35 34.81 3.77
462 463 1.375551 CCTATGTTACACGGGTTGGC 58.624 55.000 0.00 0.00 0.00 4.52
463 464 1.003851 CTATGTTACACGGGTTGGCG 58.996 55.000 0.00 0.00 0.00 5.69
464 465 1.020333 TATGTTACACGGGTTGGCGC 61.020 55.000 0.00 0.00 0.00 6.53
465 466 2.973600 GTTACACGGGTTGGCGCA 60.974 61.111 10.83 0.00 0.00 6.09
466 467 2.666862 TTACACGGGTTGGCGCAG 60.667 61.111 10.83 0.00 0.00 5.18
467 468 3.166490 TTACACGGGTTGGCGCAGA 62.166 57.895 10.83 0.00 0.00 4.26
468 469 3.583276 TACACGGGTTGGCGCAGAG 62.583 63.158 10.83 0.00 0.00 3.35
487 488 3.348236 CCCGATTGGCATGCTAGC 58.652 61.111 18.92 8.10 0.00 3.42
503 504 5.041951 TGCTAGCCAACGTTAAAATTCAG 57.958 39.130 13.29 0.00 0.00 3.02
524 525 3.541996 CCCATTGGGCTATTTCAAACC 57.458 47.619 9.28 0.00 35.35 3.27
529 530 6.725834 CCCATTGGGCTATTTCAAACCTATAT 59.274 38.462 9.28 0.00 35.35 0.86
542 543 9.689501 TTTCAAACCTATATTAAACCTACTGGG 57.310 33.333 0.00 0.00 41.89 4.45
543 544 7.808218 TCAAACCTATATTAAACCTACTGGGG 58.192 38.462 0.00 0.00 40.03 4.96
606 607 2.331019 AAAAACGGGTCGTGCTGTGC 62.331 55.000 0.00 0.00 39.99 4.57
607 608 3.750373 AAACGGGTCGTGCTGTGCT 62.750 57.895 0.00 0.00 39.99 4.40
617 618 2.048222 GCTGTGCTGGCACTCGTA 60.048 61.111 23.30 5.46 46.30 3.43
626 627 2.184579 GCACTCGTACCCAGCCTC 59.815 66.667 0.00 0.00 0.00 4.70
628 629 3.450115 ACTCGTACCCAGCCTCGC 61.450 66.667 0.00 0.00 0.00 5.03
629 630 3.449227 CTCGTACCCAGCCTCGCA 61.449 66.667 0.00 0.00 0.00 5.10
630 631 3.417275 CTCGTACCCAGCCTCGCAG 62.417 68.421 0.00 0.00 0.00 5.18
693 706 4.828296 GGCCAGGCCCATCACAGG 62.828 72.222 21.62 0.00 44.06 4.00
712 737 4.624364 CGGGCGCATGGGCTATCA 62.624 66.667 30.72 0.00 41.87 2.15
740 765 1.223487 GCTAAGACCGGCCCATTCA 59.777 57.895 0.00 0.00 0.00 2.57
755 780 2.440409 CATTCAGCCAGGTTTGCTACT 58.560 47.619 0.00 0.00 36.81 2.57
756 781 2.656947 TTCAGCCAGGTTTGCTACTT 57.343 45.000 0.00 0.00 36.81 2.24
769 794 2.171840 TGCTACTTGTCCCTGTCTCTC 58.828 52.381 0.00 0.00 0.00 3.20
771 796 2.165437 GCTACTTGTCCCTGTCTCTCTG 59.835 54.545 0.00 0.00 0.00 3.35
776 801 1.707989 TGTCCCTGTCTCTCTGTCTCT 59.292 52.381 0.00 0.00 0.00 3.10
777 802 2.290641 TGTCCCTGTCTCTCTGTCTCTC 60.291 54.545 0.00 0.00 0.00 3.20
819 848 3.334604 CCCTTCCTATGCAGGGCA 58.665 61.111 0.00 0.00 43.69 5.36
820 849 1.152881 CCCTTCCTATGCAGGGCAC 60.153 63.158 0.00 0.00 43.69 5.01
821 850 1.639635 CCCTTCCTATGCAGGGCACT 61.640 60.000 0.00 0.00 43.69 4.40
822 851 0.179034 CCTTCCTATGCAGGGCACTC 60.179 60.000 0.00 0.00 43.04 3.51
899 931 7.544566 GCGGATAATAAATCTGGTAAAGATCGA 59.455 37.037 0.00 0.00 45.37 3.59
1011 1043 0.107456 ATCCAGTAATGGAGGCAGCG 59.893 55.000 18.08 0.00 41.88 5.18
1014 1046 1.144936 AGTAATGGAGGCAGCGAGC 59.855 57.895 0.00 0.00 44.65 5.03
1152 1184 2.100603 GAGACCGAGTTCGAGGCG 59.899 66.667 2.59 0.00 43.02 5.52
1451 1483 2.754658 GGCCGAGGAGGAAGACGA 60.755 66.667 0.00 0.00 45.00 4.20
1488 1520 2.127232 GCGGCAACTGAAGAACGC 60.127 61.111 0.00 0.00 40.19 4.84
1524 1556 7.275920 AGTGAGTGAACTGAACTAATGTTTCT 58.724 34.615 0.00 0.00 36.39 2.52
1539 1571 5.998454 ATGTTTCTTCAGATTAGCGATGG 57.002 39.130 0.00 0.00 0.00 3.51
1557 1617 5.295787 GCGATGGTGGTAATGATTTTAGTCA 59.704 40.000 0.00 0.00 0.00 3.41
1580 1640 7.011857 GTCAGATTCGAAATGGCTCTTCTTTAT 59.988 37.037 0.00 0.00 0.00 1.40
1581 1641 8.204160 TCAGATTCGAAATGGCTCTTCTTTATA 58.796 33.333 0.00 0.00 0.00 0.98
1582 1642 8.279103 CAGATTCGAAATGGCTCTTCTTTATAC 58.721 37.037 0.00 0.00 0.00 1.47
1584 1644 7.539712 TTCGAAATGGCTCTTCTTTATACTG 57.460 36.000 0.00 0.00 0.00 2.74
1620 1682 2.922740 TGTTTACCCGCTCTTTCACT 57.077 45.000 0.00 0.00 0.00 3.41
1646 1708 6.097129 GGTAGTGTACCTCTAGAAAAGATGCT 59.903 42.308 0.00 0.00 45.52 3.79
1701 1763 5.645067 TGTCAGACATTTTTATCAGCCTCTG 59.355 40.000 0.00 0.00 0.00 3.35
1786 1862 8.722480 TGTAAAATCTATCCTGACAGACAATG 57.278 34.615 3.32 0.00 0.00 2.82
1793 1869 9.766754 ATCTATCCTGACAGACAATGATATACT 57.233 33.333 3.32 0.00 0.00 2.12
1794 1870 9.237187 TCTATCCTGACAGACAATGATATACTC 57.763 37.037 3.32 0.00 0.00 2.59
1795 1871 6.656632 TCCTGACAGACAATGATATACTCC 57.343 41.667 3.32 0.00 0.00 3.85
1796 1872 5.540337 TCCTGACAGACAATGATATACTCCC 59.460 44.000 3.32 0.00 0.00 4.30
1797 1873 5.305386 CCTGACAGACAATGATATACTCCCA 59.695 44.000 3.32 0.00 0.00 4.37
1798 1874 6.183361 CCTGACAGACAATGATATACTCCCAA 60.183 42.308 3.32 0.00 0.00 4.12
1799 1875 6.582636 TGACAGACAATGATATACTCCCAAC 58.417 40.000 0.00 0.00 0.00 3.77
1800 1876 6.384015 TGACAGACAATGATATACTCCCAACT 59.616 38.462 0.00 0.00 0.00 3.16
1801 1877 7.563556 TGACAGACAATGATATACTCCCAACTA 59.436 37.037 0.00 0.00 0.00 2.24
1802 1878 7.727181 ACAGACAATGATATACTCCCAACTAC 58.273 38.462 0.00 0.00 0.00 2.73
1803 1879 7.344612 ACAGACAATGATATACTCCCAACTACA 59.655 37.037 0.00 0.00 0.00 2.74
1804 1880 8.204160 CAGACAATGATATACTCCCAACTACAA 58.796 37.037 0.00 0.00 0.00 2.41
1811 1887 8.367911 TGATATACTCCCAACTACAATAAGCTG 58.632 37.037 0.00 0.00 0.00 4.24
1812 1888 4.910458 ACTCCCAACTACAATAAGCTGT 57.090 40.909 0.00 0.00 0.00 4.40
1813 1889 4.833390 ACTCCCAACTACAATAAGCTGTC 58.167 43.478 0.00 0.00 0.00 3.51
1815 1891 4.832248 TCCCAACTACAATAAGCTGTCTG 58.168 43.478 0.00 0.00 0.00 3.51
1816 1892 4.286032 TCCCAACTACAATAAGCTGTCTGT 59.714 41.667 0.00 0.00 0.00 3.41
1817 1893 5.482526 TCCCAACTACAATAAGCTGTCTGTA 59.517 40.000 0.00 0.00 0.00 2.74
1818 1894 6.014070 TCCCAACTACAATAAGCTGTCTGTAA 60.014 38.462 0.00 0.00 0.00 2.41
1820 1896 7.336931 CCCAACTACAATAAGCTGTCTGTAAAT 59.663 37.037 0.00 0.00 0.00 1.40
1821 1897 9.378551 CCAACTACAATAAGCTGTCTGTAAATA 57.621 33.333 0.00 0.00 0.00 1.40
1824 1900 9.084164 ACTACAATAAGCTGTCTGTAAATAACG 57.916 33.333 0.00 0.00 0.00 3.18
1825 1901 9.297586 CTACAATAAGCTGTCTGTAAATAACGA 57.702 33.333 0.00 0.00 0.00 3.85
1826 1902 8.542497 ACAATAAGCTGTCTGTAAATAACGAA 57.458 30.769 0.00 0.00 0.00 3.85
1827 1903 9.162764 ACAATAAGCTGTCTGTAAATAACGAAT 57.837 29.630 0.00 0.00 0.00 3.34
1832 1908 8.853469 AGCTGTCTGTAAATAACGAATACTAC 57.147 34.615 0.00 0.00 0.00 2.73
1877 1953 8.950210 AGTCTATTTCAAATCATAACCACAGTG 58.050 33.333 0.00 0.00 0.00 3.66
1897 1973 7.816640 ACAGTGCTTGTGTGTATAAAATAAGG 58.183 34.615 0.00 0.00 38.99 2.69
1950 2026 9.826574 AATAGCAAAATCACCGTCTATAAGTTA 57.173 29.630 0.00 0.00 0.00 2.24
2002 2078 8.265055 TCCTTGTAGGTTTACATATTTCCTCTG 58.735 37.037 0.00 0.00 39.43 3.35
2076 2152 4.837093 TCTTCCCACGATTCCTTTGTAT 57.163 40.909 0.00 0.00 0.00 2.29
2141 2232 1.340600 CGGTGGGGCTCCTTTGATTTA 60.341 52.381 3.07 0.00 0.00 1.40
2217 2308 9.513906 TCTATGTTGTTTGTTTGATTCATAGGA 57.486 29.630 0.00 0.00 36.17 2.94
2220 2311 9.643693 ATGTTGTTTGTTTGATTCATAGGATTC 57.356 29.630 0.00 0.00 0.00 2.52
2222 2313 9.474920 GTTGTTTGTTTGATTCATAGGATTCAA 57.525 29.630 9.88 9.88 40.03 2.69
2223 2314 9.695526 TTGTTTGTTTGATTCATAGGATTCAAG 57.304 29.630 12.73 0.00 41.66 3.02
2224 2315 7.814107 TGTTTGTTTGATTCATAGGATTCAAGC 59.186 33.333 16.80 16.80 41.66 4.01
2225 2316 7.465353 TTGTTTGATTCATAGGATTCAAGCA 57.535 32.000 20.28 20.28 44.94 3.91
2226 2317 7.649533 TGTTTGATTCATAGGATTCAAGCAT 57.350 32.000 20.28 0.00 43.40 3.79
2227 2318 8.750515 TGTTTGATTCATAGGATTCAAGCATA 57.249 30.769 20.28 6.27 43.40 3.14
2228 2319 9.358406 TGTTTGATTCATAGGATTCAAGCATAT 57.642 29.630 20.28 0.00 43.40 1.78
2275 2367 9.998106 TTGTACTATTTCCCATAGATTTCTAGC 57.002 33.333 0.00 0.00 0.00 3.42
2281 2373 5.489792 TCCCATAGATTTCTAGCATCCAC 57.510 43.478 0.00 0.00 0.00 4.02
2283 2375 5.247110 TCCCATAGATTTCTAGCATCCACTC 59.753 44.000 0.00 0.00 0.00 3.51
2284 2376 5.012458 CCCATAGATTTCTAGCATCCACTCA 59.988 44.000 0.00 0.00 0.00 3.41
2286 2378 7.166851 CCATAGATTTCTAGCATCCACTCAAT 58.833 38.462 0.00 0.00 0.00 2.57
2291 2383 2.103771 TCTAGCATCCACTCAATCCTGC 59.896 50.000 0.00 0.00 0.00 4.85
2294 2386 2.507058 AGCATCCACTCAATCCTGCTTA 59.493 45.455 0.00 0.00 36.62 3.09
2299 2391 4.985538 TCCACTCAATCCTGCTTAAAAGT 58.014 39.130 0.00 0.00 0.00 2.66
2342 2434 5.033589 TGCAATCAAACAACCCAAAATCT 57.966 34.783 0.00 0.00 0.00 2.40
2346 2438 6.481644 GCAATCAAACAACCCAAAATCTTGTA 59.518 34.615 0.00 0.00 0.00 2.41
2359 2451 7.504911 CCCAAAATCTTGTAGGATTGAGATGAT 59.495 37.037 0.00 0.00 36.24 2.45
2364 2456 7.607615 TCTTGTAGGATTGAGATGATCATGA 57.392 36.000 14.30 0.00 37.89 3.07
2369 2461 7.876582 TGTAGGATTGAGATGATCATGACATTC 59.123 37.037 14.30 15.96 37.89 2.67
2370 2462 6.838382 AGGATTGAGATGATCATGACATTCA 58.162 36.000 14.30 6.19 37.89 2.57
2406 2498 6.755542 TTTCCATTCCAGGGTTTTTACAAT 57.244 33.333 0.00 0.00 0.00 2.71
2407 2499 5.993748 TCCATTCCAGGGTTTTTACAATC 57.006 39.130 0.00 0.00 0.00 2.67
2410 2502 5.955355 CCATTCCAGGGTTTTTACAATCCTA 59.045 40.000 0.00 0.00 0.00 2.94
2427 2519 6.998074 ACAATCCTACAAATCAAAGAGACACA 59.002 34.615 0.00 0.00 0.00 3.72
2434 2527 7.814264 ACAAATCAAAGAGACACAATCTTCT 57.186 32.000 0.00 0.00 38.00 2.85
2437 2530 8.347771 CAAATCAAAGAGACACAATCTTCTTGA 58.652 33.333 0.00 0.00 40.14 3.02
2449 2542 2.247358 TCTTCTTGATTTTGGGCCCAC 58.753 47.619 28.70 14.49 0.00 4.61
2453 2546 0.468214 TTGATTTTGGGCCCACGACA 60.468 50.000 28.70 19.37 0.00 4.35
2456 2549 0.757188 ATTTTGGGCCCACGACACAA 60.757 50.000 28.70 12.94 0.00 3.33
2457 2550 0.970937 TTTTGGGCCCACGACACAAA 60.971 50.000 28.70 18.90 0.00 2.83
2467 2560 4.453136 GCCCACGACACAAACTTTATTAGA 59.547 41.667 0.00 0.00 0.00 2.10
2469 2562 6.674760 GCCCACGACACAAACTTTATTAGATC 60.675 42.308 0.00 0.00 0.00 2.75
2471 2564 6.594159 CCACGACACAAACTTTATTAGATCCT 59.406 38.462 0.00 0.00 0.00 3.24
2472 2565 7.201530 CCACGACACAAACTTTATTAGATCCTC 60.202 40.741 0.00 0.00 0.00 3.71
2473 2566 7.545965 CACGACACAAACTTTATTAGATCCTCT 59.454 37.037 0.00 0.00 0.00 3.69
2474 2567 8.746530 ACGACACAAACTTTATTAGATCCTCTA 58.253 33.333 0.00 0.00 0.00 2.43
2475 2568 9.751542 CGACACAAACTTTATTAGATCCTCTAT 57.248 33.333 0.00 0.00 0.00 1.98
2479 2572 9.838339 ACAAACTTTATTAGATCCTCTATGTGG 57.162 33.333 0.00 0.00 0.00 4.17
2480 2573 8.778358 CAAACTTTATTAGATCCTCTATGTGGC 58.222 37.037 0.00 0.00 0.00 5.01
2481 2574 7.010339 ACTTTATTAGATCCTCTATGTGGCC 57.990 40.000 0.00 0.00 0.00 5.36
2482 2575 6.558775 ACTTTATTAGATCCTCTATGTGGCCA 59.441 38.462 0.00 0.00 0.00 5.36
2483 2576 7.238514 ACTTTATTAGATCCTCTATGTGGCCAT 59.761 37.037 9.72 0.00 34.97 4.40
2484 2577 5.690464 ATTAGATCCTCTATGTGGCCATC 57.310 43.478 9.72 3.12 32.29 3.51
2485 2578 2.264455 AGATCCTCTATGTGGCCATCC 58.736 52.381 9.72 0.00 32.29 3.51
2486 2579 1.980765 GATCCTCTATGTGGCCATCCA 59.019 52.381 9.72 2.77 40.85 3.41
2487 2580 1.427809 TCCTCTATGTGGCCATCCAG 58.572 55.000 9.72 6.39 44.48 3.86
2488 2581 1.135094 CCTCTATGTGGCCATCCAGT 58.865 55.000 9.72 0.00 44.48 4.00
2489 2582 1.071385 CCTCTATGTGGCCATCCAGTC 59.929 57.143 9.72 0.00 44.48 3.51
2490 2583 1.764723 CTCTATGTGGCCATCCAGTCA 59.235 52.381 9.72 0.00 44.48 3.41
2491 2584 2.171237 CTCTATGTGGCCATCCAGTCAA 59.829 50.000 9.72 0.00 44.48 3.18
2492 2585 2.779430 TCTATGTGGCCATCCAGTCAAT 59.221 45.455 9.72 0.00 44.48 2.57
2493 2586 2.062971 ATGTGGCCATCCAGTCAATC 57.937 50.000 9.72 0.00 44.48 2.67
2494 2587 0.697658 TGTGGCCATCCAGTCAATCA 59.302 50.000 9.72 0.00 44.48 2.57
2495 2588 1.285667 TGTGGCCATCCAGTCAATCAT 59.714 47.619 9.72 0.00 44.48 2.45
2496 2589 1.679680 GTGGCCATCCAGTCAATCATG 59.320 52.381 9.72 0.00 44.48 3.07
2497 2590 0.672342 GGCCATCCAGTCAATCATGC 59.328 55.000 0.00 0.00 0.00 4.06
2498 2591 1.688772 GCCATCCAGTCAATCATGCT 58.311 50.000 0.00 0.00 0.00 3.79
2499 2592 1.607628 GCCATCCAGTCAATCATGCTC 59.392 52.381 0.00 0.00 0.00 4.26
2500 2593 1.871676 CCATCCAGTCAATCATGCTCG 59.128 52.381 0.00 0.00 0.00 5.03
2501 2594 1.871676 CATCCAGTCAATCATGCTCGG 59.128 52.381 0.00 0.00 0.00 4.63
2502 2595 0.904649 TCCAGTCAATCATGCTCGGT 59.095 50.000 0.00 0.00 0.00 4.69
2503 2596 1.012086 CCAGTCAATCATGCTCGGTG 58.988 55.000 0.00 0.00 0.00 4.94
2504 2597 1.405933 CCAGTCAATCATGCTCGGTGA 60.406 52.381 0.00 0.00 0.00 4.02
2505 2598 1.931841 CAGTCAATCATGCTCGGTGAG 59.068 52.381 0.00 0.00 0.00 3.51
2506 2599 1.552337 AGTCAATCATGCTCGGTGAGT 59.448 47.619 0.00 0.00 31.39 3.41
2507 2600 2.760650 AGTCAATCATGCTCGGTGAGTA 59.239 45.455 0.00 0.00 31.39 2.59
2508 2601 3.386078 AGTCAATCATGCTCGGTGAGTAT 59.614 43.478 0.00 0.00 35.49 2.12
2511 2604 2.435805 AATCATGCTCGGTGAGTATGGT 59.564 45.455 19.95 13.26 45.36 3.55
2512 2605 1.575244 CATGCTCGGTGAGTATGGTG 58.425 55.000 14.66 0.00 44.83 4.17
2513 2606 1.134699 CATGCTCGGTGAGTATGGTGT 60.135 52.381 14.66 0.00 44.83 4.16
2514 2607 0.973632 TGCTCGGTGAGTATGGTGTT 59.026 50.000 0.00 0.00 31.39 3.32
2515 2608 1.067142 TGCTCGGTGAGTATGGTGTTC 60.067 52.381 0.00 0.00 31.39 3.18
2516 2609 1.739371 GCTCGGTGAGTATGGTGTTCC 60.739 57.143 0.00 0.00 31.39 3.62
2517 2610 4.303179 GCTCGGTGAGTATGGTGTTCCA 62.303 54.545 0.00 0.00 38.88 3.53
2528 2621 1.941812 GTGTTCCACCTGCACTTCG 59.058 57.895 0.00 0.00 0.00 3.79
2529 2622 0.814010 GTGTTCCACCTGCACTTCGT 60.814 55.000 0.00 0.00 0.00 3.85
2530 2623 0.531974 TGTTCCACCTGCACTTCGTC 60.532 55.000 0.00 0.00 0.00 4.20
2531 2624 0.531974 GTTCCACCTGCACTTCGTCA 60.532 55.000 0.00 0.00 0.00 4.35
2532 2625 0.249868 TTCCACCTGCACTTCGTCAG 60.250 55.000 0.00 0.00 0.00 3.51
2533 2626 2.320587 CCACCTGCACTTCGTCAGC 61.321 63.158 0.00 0.00 0.00 4.26
2534 2627 1.595109 CACCTGCACTTCGTCAGCA 60.595 57.895 0.00 0.00 36.72 4.41
2535 2628 1.595382 ACCTGCACTTCGTCAGCAC 60.595 57.895 0.00 0.00 34.13 4.40
2545 2638 2.772189 GTCAGCACGATGTCGCAC 59.228 61.111 1.77 0.00 44.43 5.34
2546 2639 1.734477 GTCAGCACGATGTCGCACT 60.734 57.895 1.77 0.00 44.43 4.40
2551 2644 1.417592 CACGATGTCGCACTTGCTC 59.582 57.895 1.77 0.00 44.43 4.26
2558 2651 4.099170 CGCACTTGCTCAGCCTGC 62.099 66.667 0.00 0.00 39.32 4.85
2574 2667 3.834231 AGCCTGCAGTATTTTTGGTTGAT 59.166 39.130 13.81 0.00 0.00 2.57
2580 2673 4.389687 GCAGTATTTTTGGTTGATGCCTTG 59.610 41.667 0.00 0.00 0.00 3.61
2598 2691 4.347607 CCTTGTTGGAGGGAGATCAATTT 58.652 43.478 0.00 0.00 38.35 1.82
2618 2711 2.176045 TCCTCACGCTCTTGGATGTTA 58.824 47.619 0.00 0.00 0.00 2.41
2623 2716 5.106157 CCTCACGCTCTTGGATGTTATTTTT 60.106 40.000 0.00 0.00 0.00 1.94
2631 2724 8.730680 GCTCTTGGATGTTATTTTTAGAGAACA 58.269 33.333 0.00 0.00 36.32 3.18
2633 2726 9.010029 TCTTGGATGTTATTTTTAGAGAACACC 57.990 33.333 0.00 0.00 34.80 4.16
2634 2727 7.372451 TGGATGTTATTTTTAGAGAACACCG 57.628 36.000 0.00 0.00 34.80 4.94
2635 2728 6.373216 TGGATGTTATTTTTAGAGAACACCGG 59.627 38.462 0.00 0.00 34.80 5.28
2638 2731 5.531659 TGTTATTTTTAGAGAACACCGGCAA 59.468 36.000 0.00 0.00 0.00 4.52
2646 2739 3.443681 AGAGAACACCGGCAATTTATTGG 59.556 43.478 0.00 0.00 38.21 3.16
2654 2747 4.161377 ACCGGCAATTTATTGGTTAAGCAT 59.839 37.500 8.40 1.88 38.21 3.79
2671 2766 8.947115 GGTTAAGCATCAAAGTTACATAGTCTT 58.053 33.333 0.00 0.00 0.00 3.01
2673 2768 9.719355 TTAAGCATCAAAGTTACATAGTCTTCA 57.281 29.630 0.00 0.00 0.00 3.02
2674 2769 7.840342 AGCATCAAAGTTACATAGTCTTCAG 57.160 36.000 0.00 0.00 0.00 3.02
2678 2773 8.824781 CATCAAAGTTACATAGTCTTCAGGATG 58.175 37.037 0.00 0.00 37.54 3.51
2679 2774 7.907389 TCAAAGTTACATAGTCTTCAGGATGT 58.093 34.615 0.00 0.00 37.40 3.06
2705 2800 3.558505 CGGAGCAGAATGAAAAACACAG 58.441 45.455 0.00 0.00 39.69 3.66
2707 2802 4.540824 GGAGCAGAATGAAAAACACAGAC 58.459 43.478 0.00 0.00 39.69 3.51
2708 2803 4.276926 GGAGCAGAATGAAAAACACAGACT 59.723 41.667 0.00 0.00 39.69 3.24
2709 2804 5.470098 GGAGCAGAATGAAAAACACAGACTA 59.530 40.000 0.00 0.00 39.69 2.59
2710 2805 6.348050 GGAGCAGAATGAAAAACACAGACTAG 60.348 42.308 0.00 0.00 39.69 2.57
2711 2806 6.058183 AGCAGAATGAAAAACACAGACTAGT 58.942 36.000 0.00 0.00 39.69 2.57
2712 2807 7.217200 AGCAGAATGAAAAACACAGACTAGTA 58.783 34.615 0.00 0.00 39.69 1.82
2713 2808 7.386299 AGCAGAATGAAAAACACAGACTAGTAG 59.614 37.037 0.00 0.00 39.69 2.57
2731 2828 9.649024 GACTAGTAGAATTCATACACGACTTAC 57.351 37.037 8.44 0.00 0.00 2.34
2733 2830 7.642082 AGTAGAATTCATACACGACTTACCT 57.358 36.000 8.44 0.00 0.00 3.08
2735 2832 8.619546 AGTAGAATTCATACACGACTTACCTAC 58.380 37.037 8.44 0.00 0.00 3.18
2746 2843 4.156556 ACGACTTACCTACGAACATGCTTA 59.843 41.667 0.00 0.00 0.00 3.09
2774 2871 1.683011 CCGAGGTGAAGCCCAATTGAT 60.683 52.381 7.12 0.00 38.26 2.57
2790 2887 7.042950 CCCAATTGATGCAAGTTTGATATCAA 58.957 34.615 14.23 14.23 42.18 2.57
2807 2904 3.804786 TCAACTACAACTGAACCGACA 57.195 42.857 0.00 0.00 0.00 4.35
2813 2910 1.340248 ACAACTGAACCGACAGACGAT 59.660 47.619 0.00 0.00 45.77 3.73
2832 2929 3.364764 CGATCTATCCCGTACCGAAGAAC 60.365 52.174 0.00 0.00 0.00 3.01
2873 2971 3.012518 CAGACAATCCGAGGCAAAGATT 58.987 45.455 0.00 0.00 0.00 2.40
2879 2977 3.261981 TCCGAGGCAAAGATTACCTTC 57.738 47.619 0.00 0.00 33.02 3.46
2890 2989 8.204836 GGCAAAGATTACCTTCTCATAGTTCTA 58.795 37.037 0.00 0.00 33.02 2.10
2932 3039 0.743701 CGATGCAGAGCTCTTGCCTT 60.744 55.000 25.45 17.26 40.80 4.35
2956 3063 2.225017 TGAATTCAGGTTCCAACTCCCC 60.225 50.000 3.38 0.00 0.00 4.81
2964 3071 1.760029 GTTCCAACTCCCCTTGCAAAA 59.240 47.619 0.00 0.00 0.00 2.44
2968 3075 1.413812 CAACTCCCCTTGCAAAAGCTT 59.586 47.619 0.00 0.00 0.00 3.74
2970 3077 2.519013 ACTCCCCTTGCAAAAGCTTAG 58.481 47.619 0.00 0.00 0.00 2.18
3004 3111 1.892329 GCAACACCCTTCATGGTCCAT 60.892 52.381 0.00 0.00 36.12 3.41
3022 3129 0.405585 ATGCCAACAACACTAGCCCT 59.594 50.000 0.00 0.00 0.00 5.19
3030 3137 2.432510 ACAACACTAGCCCTAGAGATGC 59.567 50.000 9.20 0.00 36.97 3.91
3038 3145 1.270041 GCCCTAGAGATGCCTTTCTCG 60.270 57.143 0.00 0.00 45.56 4.04
3039 3146 1.270041 CCCTAGAGATGCCTTTCTCGC 60.270 57.143 0.00 0.00 45.56 5.03
3048 3156 4.641989 AGATGCCTTTCTCGCAAATATTGT 59.358 37.500 0.00 0.00 40.22 2.71
3051 3159 4.022416 TGCCTTTCTCGCAAATATTGTTGT 60.022 37.500 0.00 0.00 32.05 3.32
3080 3188 9.166173 CAGACATGAAAAGAATTGTACCTGATA 57.834 33.333 0.00 0.00 0.00 2.15
3093 3201 0.034059 CCTGATAGCGGCGGAAAGAT 59.966 55.000 9.78 0.00 0.00 2.40
3122 3230 4.154015 TGACTGAAATAGTGGTTTCATGCG 59.846 41.667 2.91 0.00 44.48 4.73
3159 3267 7.543172 TGCAGATTTGTAAAGATGCAGAAAATC 59.457 33.333 12.47 0.58 37.96 2.17
3166 3274 3.616956 AGATGCAGAAAATCGAGGTCA 57.383 42.857 0.00 0.00 0.00 4.02
3168 3276 1.442769 TGCAGAAAATCGAGGTCAGC 58.557 50.000 0.00 0.00 0.00 4.26
3190 3298 4.871557 GCATAAGCTTGAATTTTCATGGCA 59.128 37.500 9.86 0.00 38.13 4.92
3194 3302 4.901868 AGCTTGAATTTTCATGGCAATGT 58.098 34.783 0.00 0.00 38.13 2.71
3196 3304 6.465948 AGCTTGAATTTTCATGGCAATGTAA 58.534 32.000 0.00 0.00 38.13 2.41
3227 3335 5.899547 TGAGGAGCCTCACTATTATTTCTCA 59.100 40.000 15.01 0.00 46.80 3.27
3245 3353 2.083774 TCACAGAATTTCGTGCATCCC 58.916 47.619 13.15 0.00 33.03 3.85
3257 3365 3.871775 GCATCCCAAATATGCCACG 57.128 52.632 0.00 0.00 43.17 4.94
3258 3366 1.032014 GCATCCCAAATATGCCACGT 58.968 50.000 0.00 0.00 43.17 4.49
3261 3369 1.961793 TCCCAAATATGCCACGTAGC 58.038 50.000 0.00 0.00 0.00 3.58
3311 3420 0.524392 AGCACGCGAGAGAAATCGAG 60.524 55.000 15.93 0.00 45.56 4.04
3336 3445 3.081804 CCACTATTGGGTTGTGAGAACC 58.918 50.000 2.37 2.37 39.57 3.62
3339 3448 0.179004 ATTGGGTTGTGAGAACCGCA 60.179 50.000 5.36 2.30 41.18 5.69
3340 3449 0.179004 TTGGGTTGTGAGAACCGCAT 60.179 50.000 5.36 0.00 41.18 4.73
3348 3457 2.224281 TGTGAGAACCGCATGAAGAAGT 60.224 45.455 0.00 0.00 0.00 3.01
3357 3466 2.223112 CGCATGAAGAAGTCATTTCCCG 60.223 50.000 0.00 0.00 45.13 5.14
3359 3468 1.821216 TGAAGAAGTCATTTCCCGGC 58.179 50.000 0.00 0.00 36.40 6.13
3360 3469 0.727398 GAAGAAGTCATTTCCCGGCG 59.273 55.000 0.00 0.00 36.40 6.46
3361 3470 1.305930 AAGAAGTCATTTCCCGGCGC 61.306 55.000 0.00 0.00 36.40 6.53
3362 3471 1.745489 GAAGTCATTTCCCGGCGCT 60.745 57.895 7.64 0.00 0.00 5.92
3363 3472 1.706287 GAAGTCATTTCCCGGCGCTC 61.706 60.000 7.64 0.00 0.00 5.03
3364 3473 2.435938 GTCATTTCCCGGCGCTCA 60.436 61.111 7.64 0.00 0.00 4.26
3413 3523 7.032580 CGACTCATCTTCACTAGAAAACTGAT 58.967 38.462 0.00 0.00 36.22 2.90
3437 3547 9.450807 GATAAAACTCCATGAAATTTACATCGG 57.549 33.333 0.00 2.76 0.00 4.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.489416 CAGTCGTCGTCATTGAACTTTGA 59.511 43.478 0.00 0.00 0.00 2.69
1 2 3.787826 CAGTCGTCGTCATTGAACTTTG 58.212 45.455 0.00 0.00 0.00 2.77
2 3 2.221055 GCAGTCGTCGTCATTGAACTTT 59.779 45.455 0.00 0.00 0.00 2.66
3 4 1.792949 GCAGTCGTCGTCATTGAACTT 59.207 47.619 0.00 0.00 0.00 2.66
4 5 1.269569 TGCAGTCGTCGTCATTGAACT 60.270 47.619 0.00 0.00 0.00 3.01
5 6 1.136690 TGCAGTCGTCGTCATTGAAC 58.863 50.000 0.00 0.00 0.00 3.18
6 7 1.525197 GTTGCAGTCGTCGTCATTGAA 59.475 47.619 0.00 0.00 0.00 2.69
7 8 1.136690 GTTGCAGTCGTCGTCATTGA 58.863 50.000 0.00 0.00 0.00 2.57
8 9 1.125021 GAGTTGCAGTCGTCGTCATTG 59.875 52.381 0.00 0.00 0.00 2.82
9 10 1.000163 AGAGTTGCAGTCGTCGTCATT 60.000 47.619 0.00 0.00 0.00 2.57
10 11 0.598562 AGAGTTGCAGTCGTCGTCAT 59.401 50.000 0.00 0.00 0.00 3.06
11 12 0.317854 CAGAGTTGCAGTCGTCGTCA 60.318 55.000 0.00 0.00 0.00 4.35
12 13 0.040336 TCAGAGTTGCAGTCGTCGTC 60.040 55.000 0.00 0.00 0.00 4.20
13 14 0.039978 CTCAGAGTTGCAGTCGTCGT 60.040 55.000 0.00 0.00 0.00 4.34
14 15 0.238553 TCTCAGAGTTGCAGTCGTCG 59.761 55.000 0.00 0.00 0.00 5.12
15 16 2.095008 TCATCTCAGAGTTGCAGTCGTC 60.095 50.000 3.82 0.00 0.00 4.20
16 17 1.889170 TCATCTCAGAGTTGCAGTCGT 59.111 47.619 3.82 0.00 0.00 4.34
17 18 2.643933 TCATCTCAGAGTTGCAGTCG 57.356 50.000 3.82 0.00 0.00 4.18
18 19 4.252073 ACAATCATCTCAGAGTTGCAGTC 58.748 43.478 3.82 0.00 0.00 3.51
19 20 4.252073 GACAATCATCTCAGAGTTGCAGT 58.748 43.478 3.82 2.79 0.00 4.40
20 21 3.622163 GGACAATCATCTCAGAGTTGCAG 59.378 47.826 3.82 0.03 0.00 4.41
21 22 3.262660 AGGACAATCATCTCAGAGTTGCA 59.737 43.478 3.82 0.00 0.00 4.08
22 23 3.871485 AGGACAATCATCTCAGAGTTGC 58.129 45.455 3.82 0.00 0.00 4.17
23 24 5.453057 CCCTAGGACAATCATCTCAGAGTTG 60.453 48.000 11.48 2.38 0.00 3.16
24 25 4.653341 CCCTAGGACAATCATCTCAGAGTT 59.347 45.833 11.48 0.00 0.00 3.01
25 26 4.078922 TCCCTAGGACAATCATCTCAGAGT 60.079 45.833 11.48 0.00 0.00 3.24
26 27 4.478203 TCCCTAGGACAATCATCTCAGAG 58.522 47.826 11.48 0.00 0.00 3.35
27 28 4.542906 TCCCTAGGACAATCATCTCAGA 57.457 45.455 11.48 0.00 0.00 3.27
40 41 4.159135 GTCTTCGTTTACATGTCCCTAGGA 59.841 45.833 11.48 0.00 0.00 2.94
41 42 4.159879 AGTCTTCGTTTACATGTCCCTAGG 59.840 45.833 0.00 0.06 0.00 3.02
42 43 5.326200 AGTCTTCGTTTACATGTCCCTAG 57.674 43.478 0.00 0.00 0.00 3.02
43 44 5.733620 AAGTCTTCGTTTACATGTCCCTA 57.266 39.130 0.00 0.00 0.00 3.53
44 45 4.618920 AAGTCTTCGTTTACATGTCCCT 57.381 40.909 0.00 0.00 0.00 4.20
45 46 4.153655 GGAAAGTCTTCGTTTACATGTCCC 59.846 45.833 0.00 0.00 31.77 4.46
46 47 4.753107 TGGAAAGTCTTCGTTTACATGTCC 59.247 41.667 0.00 0.00 31.77 4.02
47 48 5.465724 ACTGGAAAGTCTTCGTTTACATGTC 59.534 40.000 0.00 0.00 31.77 3.06
48 49 5.365619 ACTGGAAAGTCTTCGTTTACATGT 58.634 37.500 2.69 2.69 31.77 3.21
49 50 5.924475 ACTGGAAAGTCTTCGTTTACATG 57.076 39.130 0.00 0.00 31.77 3.21
50 51 5.820947 ACAACTGGAAAGTCTTCGTTTACAT 59.179 36.000 0.00 0.00 31.77 2.29
51 52 5.180271 ACAACTGGAAAGTCTTCGTTTACA 58.820 37.500 0.00 0.00 31.77 2.41
52 53 5.277202 GGACAACTGGAAAGTCTTCGTTTAC 60.277 44.000 0.00 0.00 31.77 2.01
53 54 4.812626 GGACAACTGGAAAGTCTTCGTTTA 59.187 41.667 0.00 0.00 31.77 2.01
54 55 3.626217 GGACAACTGGAAAGTCTTCGTTT 59.374 43.478 0.00 0.00 31.77 3.60
55 56 3.118371 AGGACAACTGGAAAGTCTTCGTT 60.118 43.478 0.00 0.00 31.77 3.85
56 57 2.434702 AGGACAACTGGAAAGTCTTCGT 59.565 45.455 0.00 0.00 31.77 3.85
57 58 3.113260 AGGACAACTGGAAAGTCTTCG 57.887 47.619 0.00 0.00 31.77 3.79
58 59 4.273724 GTCAAGGACAACTGGAAAGTCTTC 59.726 45.833 0.00 0.00 28.68 2.87
59 60 4.200092 GTCAAGGACAACTGGAAAGTCTT 58.800 43.478 0.00 0.00 28.68 3.01
60 61 3.199946 TGTCAAGGACAACTGGAAAGTCT 59.800 43.478 0.00 0.00 39.78 3.24
61 62 3.541632 TGTCAAGGACAACTGGAAAGTC 58.458 45.455 0.00 0.00 39.78 3.01
62 63 3.644966 TGTCAAGGACAACTGGAAAGT 57.355 42.857 0.00 0.00 39.78 2.66
63 64 4.558538 CTTGTCAAGGACAACTGGAAAG 57.441 45.455 7.66 0.00 45.88 2.62
76 77 2.751166 ATCGACCTCACCTTGTCAAG 57.249 50.000 5.53 5.53 0.00 3.02
77 78 2.289444 GGAATCGACCTCACCTTGTCAA 60.289 50.000 0.00 0.00 0.00 3.18
78 79 1.275291 GGAATCGACCTCACCTTGTCA 59.725 52.381 0.00 0.00 0.00 3.58
79 80 1.275291 TGGAATCGACCTCACCTTGTC 59.725 52.381 0.00 0.00 0.00 3.18
80 81 1.276421 CTGGAATCGACCTCACCTTGT 59.724 52.381 0.00 0.00 0.00 3.16
81 82 2.009042 GCTGGAATCGACCTCACCTTG 61.009 57.143 0.00 0.00 0.00 3.61
82 83 0.250513 GCTGGAATCGACCTCACCTT 59.749 55.000 0.00 0.00 0.00 3.50
83 84 0.616111 AGCTGGAATCGACCTCACCT 60.616 55.000 0.00 0.00 0.00 4.00
84 85 0.460987 CAGCTGGAATCGACCTCACC 60.461 60.000 5.57 0.00 0.00 4.02
85 86 0.460987 CCAGCTGGAATCGACCTCAC 60.461 60.000 29.88 0.00 37.39 3.51
86 87 1.617018 CCCAGCTGGAATCGACCTCA 61.617 60.000 34.91 0.00 37.39 3.86
87 88 1.144936 CCCAGCTGGAATCGACCTC 59.855 63.158 34.91 0.00 37.39 3.85
88 89 2.370445 CCCCAGCTGGAATCGACCT 61.370 63.158 34.91 0.00 37.39 3.85
89 90 2.190578 CCCCAGCTGGAATCGACC 59.809 66.667 34.91 0.00 37.39 4.79
90 91 1.144936 CTCCCCAGCTGGAATCGAC 59.855 63.158 34.91 0.00 37.39 4.20
91 92 2.735772 GCTCCCCAGCTGGAATCGA 61.736 63.158 34.91 20.46 43.09 3.59
92 93 2.203126 GCTCCCCAGCTGGAATCG 60.203 66.667 34.91 16.95 43.09 3.34
93 94 2.203126 CGCTCCCCAGCTGGAATC 60.203 66.667 34.91 17.65 44.40 2.52
94 95 2.688666 TCGCTCCCCAGCTGGAAT 60.689 61.111 34.91 0.00 44.40 3.01
95 96 3.393970 CTCGCTCCCCAGCTGGAA 61.394 66.667 34.91 19.99 44.40 3.53
98 99 4.154347 GTCCTCGCTCCCCAGCTG 62.154 72.222 6.78 6.78 44.40 4.24
99 100 4.704103 TGTCCTCGCTCCCCAGCT 62.704 66.667 0.00 0.00 44.40 4.24
100 101 3.036429 ATTGTCCTCGCTCCCCAGC 62.036 63.158 0.00 0.00 42.96 4.85
101 102 1.153289 CATTGTCCTCGCTCCCCAG 60.153 63.158 0.00 0.00 0.00 4.45
102 103 2.669133 CCATTGTCCTCGCTCCCCA 61.669 63.158 0.00 0.00 0.00 4.96
103 104 2.190578 CCATTGTCCTCGCTCCCC 59.809 66.667 0.00 0.00 0.00 4.81
104 105 2.514824 GCCATTGTCCTCGCTCCC 60.515 66.667 0.00 0.00 0.00 4.30
105 106 2.892425 CGCCATTGTCCTCGCTCC 60.892 66.667 0.00 0.00 0.00 4.70
106 107 2.892425 CCGCCATTGTCCTCGCTC 60.892 66.667 0.00 0.00 0.00 5.03
107 108 4.473520 CCCGCCATTGTCCTCGCT 62.474 66.667 0.00 0.00 0.00 4.93
108 109 4.778143 ACCCGCCATTGTCCTCGC 62.778 66.667 0.00 0.00 0.00 5.03
109 110 2.511600 GACCCGCCATTGTCCTCG 60.512 66.667 0.00 0.00 0.00 4.63
110 111 2.511600 CGACCCGCCATTGTCCTC 60.512 66.667 0.00 0.00 0.00 3.71
111 112 3.000819 TCGACCCGCCATTGTCCT 61.001 61.111 0.00 0.00 0.00 3.85
112 113 2.818274 GTCGACCCGCCATTGTCC 60.818 66.667 3.51 0.00 0.00 4.02
113 114 3.186047 CGTCGACCCGCCATTGTC 61.186 66.667 10.58 0.00 0.00 3.18
114 115 4.752879 CCGTCGACCCGCCATTGT 62.753 66.667 10.58 0.00 0.00 2.71
120 121 4.814294 AATGAGCCGTCGACCCGC 62.814 66.667 10.58 12.03 0.00 6.13
121 122 1.721664 TAGAATGAGCCGTCGACCCG 61.722 60.000 10.58 1.00 0.00 5.28
122 123 0.458669 TTAGAATGAGCCGTCGACCC 59.541 55.000 10.58 0.95 0.00 4.46
123 124 2.128035 CATTAGAATGAGCCGTCGACC 58.872 52.381 10.58 0.00 38.70 4.79
124 125 2.128035 CCATTAGAATGAGCCGTCGAC 58.872 52.381 5.18 5.18 38.70 4.20
125 126 1.538204 GCCATTAGAATGAGCCGTCGA 60.538 52.381 3.76 0.00 38.70 4.20
126 127 0.861837 GCCATTAGAATGAGCCGTCG 59.138 55.000 3.76 0.00 38.70 5.12
127 128 1.953559 TGCCATTAGAATGAGCCGTC 58.046 50.000 3.76 0.00 38.70 4.79
128 129 2.017049 GTTGCCATTAGAATGAGCCGT 58.983 47.619 3.76 0.00 38.70 5.68
129 130 2.016318 TGTTGCCATTAGAATGAGCCG 58.984 47.619 3.76 0.00 38.70 5.52
130 131 4.660789 ATTGTTGCCATTAGAATGAGCC 57.339 40.909 3.76 0.00 38.70 4.70
131 132 5.413499 ACAATTGTTGCCATTAGAATGAGC 58.587 37.500 4.92 6.35 38.70 4.26
132 133 5.740569 CGACAATTGTTGCCATTAGAATGAG 59.259 40.000 13.36 0.00 38.70 2.90
133 134 5.182950 ACGACAATTGTTGCCATTAGAATGA 59.817 36.000 23.25 0.00 34.26 2.57
134 135 5.401550 ACGACAATTGTTGCCATTAGAATG 58.598 37.500 23.25 0.00 33.40 2.67
135 136 5.643379 ACGACAATTGTTGCCATTAGAAT 57.357 34.783 23.25 0.33 32.66 2.40
136 137 5.446143 AACGACAATTGTTGCCATTAGAA 57.554 34.783 23.25 0.00 32.66 2.10
137 138 5.218885 CAAACGACAATTGTTGCCATTAGA 58.781 37.500 23.25 0.00 32.66 2.10
138 139 4.143347 GCAAACGACAATTGTTGCCATTAG 60.143 41.667 23.25 10.26 32.66 1.73
139 140 3.738282 GCAAACGACAATTGTTGCCATTA 59.262 39.130 23.25 0.00 32.66 1.90
140 141 2.543430 GCAAACGACAATTGTTGCCATT 59.457 40.909 23.25 14.03 32.66 3.16
141 142 2.134346 GCAAACGACAATTGTTGCCAT 58.866 42.857 23.25 9.20 32.66 4.40
142 143 1.565305 GCAAACGACAATTGTTGCCA 58.435 45.000 23.25 0.00 32.66 4.92
143 144 0.502275 CGCAAACGACAATTGTTGCC 59.498 50.000 23.25 5.77 43.93 4.52
144 145 0.502275 CCGCAAACGACAATTGTTGC 59.498 50.000 23.25 20.83 43.93 4.17
145 146 1.833860 ACCGCAAACGACAATTGTTG 58.166 45.000 22.00 22.00 43.93 3.33
146 147 2.159366 TGAACCGCAAACGACAATTGTT 60.159 40.909 13.36 0.00 43.93 2.83
147 148 1.402259 TGAACCGCAAACGACAATTGT 59.598 42.857 11.78 11.78 43.93 2.71
148 149 2.112475 TGAACCGCAAACGACAATTG 57.888 45.000 3.24 3.24 43.93 2.32
149 150 2.853731 TTGAACCGCAAACGACAATT 57.146 40.000 0.00 0.00 43.93 2.32
150 151 2.356382 TCTTTGAACCGCAAACGACAAT 59.644 40.909 0.00 0.00 41.37 2.71
151 152 1.738350 TCTTTGAACCGCAAACGACAA 59.262 42.857 0.00 0.00 41.37 3.18
152 153 1.062880 GTCTTTGAACCGCAAACGACA 59.937 47.619 0.00 0.00 41.37 4.35
153 154 1.596220 GGTCTTTGAACCGCAAACGAC 60.596 52.381 0.00 0.00 41.37 4.34
154 155 0.658897 GGTCTTTGAACCGCAAACGA 59.341 50.000 0.00 0.00 41.37 3.85
155 156 0.661020 AGGTCTTTGAACCGCAAACG 59.339 50.000 0.00 0.00 44.49 3.60
156 157 2.098443 TCAAGGTCTTTGAACCGCAAAC 59.902 45.455 0.00 0.00 42.69 2.93
157 158 2.370349 TCAAGGTCTTTGAACCGCAAA 58.630 42.857 0.00 0.00 42.69 3.68
158 159 2.045561 TCAAGGTCTTTGAACCGCAA 57.954 45.000 0.00 0.00 42.69 4.85
159 160 3.790691 TCAAGGTCTTTGAACCGCA 57.209 47.368 0.00 0.00 42.69 5.69
177 178 9.730420 GCACCTCGAACATAATAAAAATTACAT 57.270 29.630 0.00 0.00 0.00 2.29
178 179 8.952278 AGCACCTCGAACATAATAAAAATTACA 58.048 29.630 0.00 0.00 0.00 2.41
179 180 9.783256 AAGCACCTCGAACATAATAAAAATTAC 57.217 29.630 0.00 0.00 0.00 1.89
181 182 9.705290 AAAAGCACCTCGAACATAATAAAAATT 57.295 25.926 0.00 0.00 0.00 1.82
182 183 9.139174 CAAAAGCACCTCGAACATAATAAAAAT 57.861 29.630 0.00 0.00 0.00 1.82
183 184 8.138712 ACAAAAGCACCTCGAACATAATAAAAA 58.861 29.630 0.00 0.00 0.00 1.94
184 185 7.653647 ACAAAAGCACCTCGAACATAATAAAA 58.346 30.769 0.00 0.00 0.00 1.52
185 186 7.209471 ACAAAAGCACCTCGAACATAATAAA 57.791 32.000 0.00 0.00 0.00 1.40
186 187 6.811253 ACAAAAGCACCTCGAACATAATAA 57.189 33.333 0.00 0.00 0.00 1.40
187 188 7.766738 TCATACAAAAGCACCTCGAACATAATA 59.233 33.333 0.00 0.00 0.00 0.98
188 189 6.597672 TCATACAAAAGCACCTCGAACATAAT 59.402 34.615 0.00 0.00 0.00 1.28
189 190 5.935206 TCATACAAAAGCACCTCGAACATAA 59.065 36.000 0.00 0.00 0.00 1.90
190 191 5.483811 TCATACAAAAGCACCTCGAACATA 58.516 37.500 0.00 0.00 0.00 2.29
191 192 4.323417 TCATACAAAAGCACCTCGAACAT 58.677 39.130 0.00 0.00 0.00 2.71
192 193 3.734463 TCATACAAAAGCACCTCGAACA 58.266 40.909 0.00 0.00 0.00 3.18
193 194 4.946784 ATCATACAAAAGCACCTCGAAC 57.053 40.909 0.00 0.00 0.00 3.95
194 195 4.759693 ACAATCATACAAAAGCACCTCGAA 59.240 37.500 0.00 0.00 0.00 3.71
195 196 4.323417 ACAATCATACAAAAGCACCTCGA 58.677 39.130 0.00 0.00 0.00 4.04
196 197 4.685169 ACAATCATACAAAAGCACCTCG 57.315 40.909 0.00 0.00 0.00 4.63
197 198 8.028938 ACAAATACAATCATACAAAAGCACCTC 58.971 33.333 0.00 0.00 0.00 3.85
198 199 7.814107 CACAAATACAATCATACAAAAGCACCT 59.186 33.333 0.00 0.00 0.00 4.00
199 200 7.063308 CCACAAATACAATCATACAAAAGCACC 59.937 37.037 0.00 0.00 0.00 5.01
200 201 7.598493 ACCACAAATACAATCATACAAAAGCAC 59.402 33.333 0.00 0.00 0.00 4.40
201 202 7.665690 ACCACAAATACAATCATACAAAAGCA 58.334 30.769 0.00 0.00 0.00 3.91
202 203 9.632807 TTACCACAAATACAATCATACAAAAGC 57.367 29.630 0.00 0.00 0.00 3.51
207 208 9.915629 GGTTTTTACCACAAATACAATCATACA 57.084 29.630 0.00 0.00 0.00 2.29
278 279 7.499232 TCCTTTGTTTCCTTTTTGTGTTGAAAA 59.501 29.630 0.00 0.00 0.00 2.29
279 280 6.992715 TCCTTTGTTTCCTTTTTGTGTTGAAA 59.007 30.769 0.00 0.00 0.00 2.69
280 281 6.525629 TCCTTTGTTTCCTTTTTGTGTTGAA 58.474 32.000 0.00 0.00 0.00 2.69
281 282 6.102897 TCCTTTGTTTCCTTTTTGTGTTGA 57.897 33.333 0.00 0.00 0.00 3.18
282 283 6.793492 TTCCTTTGTTTCCTTTTTGTGTTG 57.207 33.333 0.00 0.00 0.00 3.33
283 284 7.809546 TTTTCCTTTGTTTCCTTTTTGTGTT 57.190 28.000 0.00 0.00 0.00 3.32
284 285 7.809546 TTTTTCCTTTGTTTCCTTTTTGTGT 57.190 28.000 0.00 0.00 0.00 3.72
312 313 2.286184 CCGTAGTATGCAAAATCGGTGC 60.286 50.000 0.00 0.00 42.55 5.01
313 314 2.286833 CCCGTAGTATGCAAAATCGGTG 59.713 50.000 15.49 7.11 35.59 4.94
314 315 2.557317 CCCGTAGTATGCAAAATCGGT 58.443 47.619 15.49 0.00 35.59 4.69
315 316 1.263217 GCCCGTAGTATGCAAAATCGG 59.737 52.381 11.72 11.72 36.85 4.18
316 317 1.263217 GGCCCGTAGTATGCAAAATCG 59.737 52.381 0.00 0.00 0.00 3.34
317 318 2.290641 CTGGCCCGTAGTATGCAAAATC 59.709 50.000 0.00 0.00 0.00 2.17
318 319 2.092646 TCTGGCCCGTAGTATGCAAAAT 60.093 45.455 0.00 0.00 0.00 1.82
319 320 1.279558 TCTGGCCCGTAGTATGCAAAA 59.720 47.619 0.00 0.00 0.00 2.44
320 321 0.906066 TCTGGCCCGTAGTATGCAAA 59.094 50.000 0.00 0.00 0.00 3.68
321 322 0.177141 GTCTGGCCCGTAGTATGCAA 59.823 55.000 0.00 0.00 0.00 4.08
322 323 1.682451 GGTCTGGCCCGTAGTATGCA 61.682 60.000 0.00 0.00 0.00 3.96
323 324 1.069258 GGTCTGGCCCGTAGTATGC 59.931 63.158 0.00 0.00 0.00 3.14
324 325 0.389391 CAGGTCTGGCCCGTAGTATG 59.611 60.000 0.00 0.00 38.26 2.39
325 326 0.759436 CCAGGTCTGGCCCGTAGTAT 60.759 60.000 0.00 0.00 44.73 2.12
326 327 1.380785 CCAGGTCTGGCCCGTAGTA 60.381 63.158 0.00 0.00 44.73 1.82
327 328 2.683933 CCAGGTCTGGCCCGTAGT 60.684 66.667 0.00 0.00 44.73 2.73
336 337 4.023137 CCCATTTGGCCAGGTCTG 57.977 61.111 5.11 2.11 0.00 3.51
353 354 2.690653 TATAACCATGGCCGGGCTGC 62.691 60.000 29.87 3.35 0.00 5.25
354 355 0.889186 GTATAACCATGGCCGGGCTG 60.889 60.000 29.87 22.43 0.00 4.85
355 356 1.349542 TGTATAACCATGGCCGGGCT 61.350 55.000 29.87 11.02 0.00 5.19
356 357 1.149627 TGTATAACCATGGCCGGGC 59.850 57.895 23.42 23.42 0.00 6.13
357 358 0.181587 TGTGTATAACCATGGCCGGG 59.818 55.000 13.04 11.54 0.00 5.73
358 359 1.593196 CTGTGTATAACCATGGCCGG 58.407 55.000 13.04 0.00 0.00 6.13
359 360 1.140052 TCCTGTGTATAACCATGGCCG 59.860 52.381 13.04 0.00 0.00 6.13
360 361 3.214328 CTTCCTGTGTATAACCATGGCC 58.786 50.000 13.04 0.00 0.00 5.36
361 362 3.214328 CCTTCCTGTGTATAACCATGGC 58.786 50.000 13.04 0.00 0.00 4.40
362 363 3.214328 GCCTTCCTGTGTATAACCATGG 58.786 50.000 11.19 11.19 0.00 3.66
363 364 3.627577 GTGCCTTCCTGTGTATAACCATG 59.372 47.826 0.00 0.00 0.00 3.66
364 365 3.681594 CGTGCCTTCCTGTGTATAACCAT 60.682 47.826 0.00 0.00 0.00 3.55
365 366 2.354303 CGTGCCTTCCTGTGTATAACCA 60.354 50.000 0.00 0.00 0.00 3.67
366 367 2.093869 TCGTGCCTTCCTGTGTATAACC 60.094 50.000 0.00 0.00 0.00 2.85
367 368 2.928116 GTCGTGCCTTCCTGTGTATAAC 59.072 50.000 0.00 0.00 0.00 1.89
368 369 2.563620 TGTCGTGCCTTCCTGTGTATAA 59.436 45.455 0.00 0.00 0.00 0.98
369 370 2.172679 TGTCGTGCCTTCCTGTGTATA 58.827 47.619 0.00 0.00 0.00 1.47
370 371 0.973632 TGTCGTGCCTTCCTGTGTAT 59.026 50.000 0.00 0.00 0.00 2.29
371 372 0.753867 TTGTCGTGCCTTCCTGTGTA 59.246 50.000 0.00 0.00 0.00 2.90
372 373 0.532862 CTTGTCGTGCCTTCCTGTGT 60.533 55.000 0.00 0.00 0.00 3.72
373 374 0.532862 ACTTGTCGTGCCTTCCTGTG 60.533 55.000 0.00 0.00 0.00 3.66
374 375 0.532862 CACTTGTCGTGCCTTCCTGT 60.533 55.000 0.00 0.00 36.72 4.00
375 376 2.238353 CACTTGTCGTGCCTTCCTG 58.762 57.895 0.00 0.00 36.72 3.86
376 377 4.779475 CACTTGTCGTGCCTTCCT 57.221 55.556 0.00 0.00 36.72 3.36
383 384 2.562912 GCCCATGCACTTGTCGTG 59.437 61.111 0.00 0.00 46.58 4.35
384 385 2.672996 GGCCCATGCACTTGTCGT 60.673 61.111 0.00 0.00 40.13 4.34
385 386 3.803082 CGGCCCATGCACTTGTCG 61.803 66.667 0.00 0.00 40.13 4.35
386 387 3.443045 CCGGCCCATGCACTTGTC 61.443 66.667 0.00 0.00 40.13 3.18
401 402 3.583276 TAGCAAGTGTGTCGGCCCG 62.583 63.158 0.00 0.00 0.00 6.13
402 403 2.033194 GTAGCAAGTGTGTCGGCCC 61.033 63.158 0.00 0.00 0.00 5.80
403 404 2.033194 GGTAGCAAGTGTGTCGGCC 61.033 63.158 0.00 0.00 0.00 6.13
404 405 2.033194 GGGTAGCAAGTGTGTCGGC 61.033 63.158 0.00 0.00 0.00 5.54
405 406 0.389948 GAGGGTAGCAAGTGTGTCGG 60.390 60.000 0.00 0.00 0.00 4.79
406 407 0.389948 GGAGGGTAGCAAGTGTGTCG 60.390 60.000 0.00 0.00 0.00 4.35
407 408 0.977395 AGGAGGGTAGCAAGTGTGTC 59.023 55.000 0.00 0.00 0.00 3.67
408 409 1.072331 CAAGGAGGGTAGCAAGTGTGT 59.928 52.381 0.00 0.00 0.00 3.72
409 410 1.611673 CCAAGGAGGGTAGCAAGTGTG 60.612 57.143 0.00 0.00 0.00 3.82
410 411 0.693049 CCAAGGAGGGTAGCAAGTGT 59.307 55.000 0.00 0.00 0.00 3.55
411 412 0.693049 ACCAAGGAGGGTAGCAAGTG 59.307 55.000 0.00 0.00 43.89 3.16
412 413 0.984995 GACCAAGGAGGGTAGCAAGT 59.015 55.000 0.00 0.00 42.53 3.16
413 414 0.108138 CGACCAAGGAGGGTAGCAAG 60.108 60.000 0.00 0.00 42.53 4.01
414 415 0.543410 TCGACCAAGGAGGGTAGCAA 60.543 55.000 0.00 0.00 42.53 3.91
415 416 1.077805 TCGACCAAGGAGGGTAGCA 59.922 57.895 0.00 0.00 42.53 3.49
416 417 1.516423 GTCGACCAAGGAGGGTAGC 59.484 63.158 3.51 0.00 42.53 3.58
417 418 1.807886 CGTCGACCAAGGAGGGTAG 59.192 63.158 10.58 0.00 42.53 3.18
418 419 2.345760 GCGTCGACCAAGGAGGGTA 61.346 63.158 10.58 0.00 42.53 3.69
419 420 3.692406 GCGTCGACCAAGGAGGGT 61.692 66.667 10.58 0.00 46.02 4.34
420 421 3.691342 TGCGTCGACCAAGGAGGG 61.691 66.667 10.58 0.00 43.89 4.30
421 422 2.432628 GTGCGTCGACCAAGGAGG 60.433 66.667 10.58 0.00 45.67 4.30
422 423 2.805353 CGTGCGTCGACCAAGGAG 60.805 66.667 10.58 0.00 42.86 3.69
423 424 3.289062 TCGTGCGTCGACCAAGGA 61.289 61.111 10.58 6.70 44.01 3.36
430 431 2.438975 ATAGGGGTCGTGCGTCGA 60.439 61.111 0.00 0.00 46.83 4.20
431 432 2.278596 CATAGGGGTCGTGCGTCG 60.279 66.667 0.00 0.00 41.41 5.12
432 433 0.457035 TAACATAGGGGTCGTGCGTC 59.543 55.000 0.00 0.00 0.00 5.19
433 434 0.174162 GTAACATAGGGGTCGTGCGT 59.826 55.000 0.00 0.00 0.00 5.24
434 435 0.173935 TGTAACATAGGGGTCGTGCG 59.826 55.000 0.00 0.00 0.00 5.34
435 436 1.648504 GTGTAACATAGGGGTCGTGC 58.351 55.000 0.00 0.00 36.32 5.34
436 437 1.470285 CCGTGTAACATAGGGGTCGTG 60.470 57.143 0.00 0.00 35.74 4.35
437 438 0.819582 CCGTGTAACATAGGGGTCGT 59.180 55.000 0.00 0.00 35.74 4.34
438 439 0.103572 CCCGTGTAACATAGGGGTCG 59.896 60.000 5.20 0.00 40.18 4.79
443 444 1.375551 GCCAACCCGTGTAACATAGG 58.624 55.000 0.00 0.00 35.74 2.57
444 445 1.003851 CGCCAACCCGTGTAACATAG 58.996 55.000 0.00 0.00 35.74 2.23
445 446 1.020333 GCGCCAACCCGTGTAACATA 61.020 55.000 0.00 0.00 35.74 2.29
446 447 2.329614 GCGCCAACCCGTGTAACAT 61.330 57.895 0.00 0.00 35.74 2.71
447 448 2.973600 GCGCCAACCCGTGTAACA 60.974 61.111 0.00 0.00 35.74 2.41
448 449 2.961669 CTGCGCCAACCCGTGTAAC 61.962 63.158 4.18 0.00 0.00 2.50
449 450 2.666862 CTGCGCCAACCCGTGTAA 60.667 61.111 4.18 0.00 0.00 2.41
450 451 3.583276 CTCTGCGCCAACCCGTGTA 62.583 63.158 4.18 0.00 0.00 2.90
451 452 4.988598 CTCTGCGCCAACCCGTGT 62.989 66.667 4.18 0.00 0.00 4.49
470 471 3.348236 GCTAGCATGCCAATCGGG 58.652 61.111 15.66 0.00 40.85 5.14
478 479 2.911819 TTTAACGTTGGCTAGCATGC 57.088 45.000 18.24 10.51 0.00 4.06
479 480 5.398169 TGAATTTTAACGTTGGCTAGCATG 58.602 37.500 18.24 4.81 0.00 4.06
480 481 5.637006 TGAATTTTAACGTTGGCTAGCAT 57.363 34.783 18.24 0.00 0.00 3.79
481 482 4.614993 GCTGAATTTTAACGTTGGCTAGCA 60.615 41.667 18.24 0.00 0.00 3.49
482 483 3.851969 GCTGAATTTTAACGTTGGCTAGC 59.148 43.478 11.99 6.04 0.00 3.42
483 484 4.412207 GGCTGAATTTTAACGTTGGCTAG 58.588 43.478 11.99 1.59 0.00 3.42
484 485 3.191791 GGGCTGAATTTTAACGTTGGCTA 59.808 43.478 11.99 0.00 0.00 3.93
485 486 2.029380 GGGCTGAATTTTAACGTTGGCT 60.029 45.455 11.99 0.00 0.00 4.75
486 487 2.288518 TGGGCTGAATTTTAACGTTGGC 60.289 45.455 11.99 3.42 0.00 4.52
487 488 3.651803 TGGGCTGAATTTTAACGTTGG 57.348 42.857 11.99 0.00 0.00 3.77
488 489 4.388469 CCAATGGGCTGAATTTTAACGTTG 59.612 41.667 11.99 0.00 0.00 4.10
489 490 4.562552 CCCAATGGGCTGAATTTTAACGTT 60.563 41.667 4.89 5.88 35.35 3.99
490 491 3.056179 CCCAATGGGCTGAATTTTAACGT 60.056 43.478 4.89 0.00 35.35 3.99
491 492 3.520569 CCCAATGGGCTGAATTTTAACG 58.479 45.455 4.89 0.00 35.35 3.18
519 520 7.501225 CACCCCAGTAGGTTTAATATAGGTTTG 59.499 40.741 0.00 0.00 38.39 2.93
520 521 7.185120 ACACCCCAGTAGGTTTAATATAGGTTT 59.815 37.037 0.00 0.00 38.39 3.27
529 530 9.825706 ATTTTTAATACACCCCAGTAGGTTTAA 57.174 29.630 0.00 0.00 38.39 1.52
533 534 9.825706 TTTTATTTTTAATACACCCCAGTAGGT 57.174 29.630 0.00 0.00 42.40 3.08
589 590 3.276846 GCACAGCACGACCCGTTT 61.277 61.111 0.00 0.00 38.32 3.60
606 607 2.125512 GCTGGGTACGAGTGCCAG 60.126 66.667 12.21 9.96 36.24 4.85
607 608 3.702048 GGCTGGGTACGAGTGCCA 61.702 66.667 12.21 1.20 42.79 4.92
659 672 1.265905 GGCCCGGCAAGTTTATAATCG 59.734 52.381 12.58 0.00 0.00 3.34
695 708 4.624364 TGATAGCCCATGCGCCCG 62.624 66.667 4.18 0.00 44.33 6.13
696 709 2.670934 CTGATAGCCCATGCGCCC 60.671 66.667 4.18 0.00 44.33 6.13
697 710 2.670934 CCTGATAGCCCATGCGCC 60.671 66.667 4.18 0.00 44.33 6.53
698 711 3.360340 GCCTGATAGCCCATGCGC 61.360 66.667 0.00 0.00 44.33 6.09
712 737 4.452733 GTCTTAGCGTGCCGGCCT 62.453 66.667 26.77 16.82 0.00 5.19
735 760 2.440409 AGTAGCAAACCTGGCTGAATG 58.560 47.619 0.00 0.00 42.62 2.67
740 765 1.545651 GGACAAGTAGCAAACCTGGCT 60.546 52.381 0.00 0.00 45.18 4.75
755 780 2.109128 AGAGACAGAGAGACAGGGACAA 59.891 50.000 0.00 0.00 0.00 3.18
756 781 1.707989 AGAGACAGAGAGACAGGGACA 59.292 52.381 0.00 0.00 0.00 4.02
776 801 1.002990 TCTACGCCCTGACTCGTGA 60.003 57.895 0.00 0.00 39.46 4.35
777 802 1.306642 ACTCTACGCCCTGACTCGTG 61.307 60.000 0.00 0.00 39.46 4.35
786 811 1.049289 AGGGGATGAACTCTACGCCC 61.049 60.000 0.00 0.00 36.27 6.13
818 847 1.213013 CGACTTCTGACGGGGAGTG 59.787 63.158 0.00 0.00 0.00 3.51
819 848 0.538977 TTCGACTTCTGACGGGGAGT 60.539 55.000 0.00 0.00 32.67 3.85
820 849 0.818296 ATTCGACTTCTGACGGGGAG 59.182 55.000 0.00 0.00 32.67 4.30
821 850 0.815734 GATTCGACTTCTGACGGGGA 59.184 55.000 0.00 0.00 32.67 4.81
822 851 0.525668 CGATTCGACTTCTGACGGGG 60.526 60.000 0.00 0.00 32.67 5.73
826 855 1.921230 GCTTCCGATTCGACTTCTGAC 59.079 52.381 7.83 0.00 0.00 3.51
899 931 6.629156 AGATAGAGTGATGATAAAGGGGAGT 58.371 40.000 0.00 0.00 0.00 3.85
941 973 4.262036 CCATGGAGAAATCGGAATCGTAGA 60.262 45.833 5.56 0.00 45.75 2.59
1136 1168 3.441290 CCGCCTCGAACTCGGTCT 61.441 66.667 10.42 0.00 40.29 3.85
1138 1170 2.987547 TTCCGCCTCGAACTCGGT 60.988 61.111 16.03 0.00 43.35 4.69
1140 1172 2.881352 GCTTCCGCCTCGAACTCG 60.881 66.667 0.00 0.00 41.45 4.18
1141 1173 1.807573 CTGCTTCCGCCTCGAACTC 60.808 63.158 0.00 0.00 34.43 3.01
1142 1174 2.219325 CTCTGCTTCCGCCTCGAACT 62.219 60.000 0.00 0.00 34.43 3.01
1143 1175 1.807573 CTCTGCTTCCGCCTCGAAC 60.808 63.158 0.00 0.00 34.43 3.95
1144 1176 2.276116 ACTCTGCTTCCGCCTCGAA 61.276 57.895 0.00 0.00 34.43 3.71
1145 1177 2.676822 ACTCTGCTTCCGCCTCGA 60.677 61.111 0.00 0.00 34.43 4.04
1152 1184 0.735632 CTCTGCGACACTCTGCTTCC 60.736 60.000 0.00 0.00 0.00 3.46
1155 1187 1.882311 CTCTCTGCGACACTCTGCT 59.118 57.895 0.00 0.00 0.00 4.24
1451 1483 2.481952 GCAGACTTTTCTTCGTCAGCAT 59.518 45.455 0.00 0.00 40.84 3.79
1488 1520 1.239347 TCACTCACTCACTGGACGAG 58.761 55.000 0.00 0.00 36.53 4.18
1524 1556 4.746535 TTACCACCATCGCTAATCTGAA 57.253 40.909 0.00 0.00 0.00 3.02
1539 1571 8.420374 TCGAATCTGACTAAAATCATTACCAC 57.580 34.615 0.00 0.00 0.00 4.16
1557 1617 8.207545 AGTATAAAGAAGAGCCATTTCGAATCT 58.792 33.333 0.00 0.00 0.00 2.40
1589 1651 7.051623 AGAGCGGGTAAACAAATATTCATACA 58.948 34.615 0.00 0.00 0.00 2.29
1685 1747 3.129988 GCACTGCAGAGGCTGATAAAAAT 59.870 43.478 23.35 0.00 41.06 1.82
1701 1763 2.098233 TAAAGCGCGGTAGCACTGC 61.098 57.895 12.91 9.30 46.66 4.40
1770 1843 7.397476 GGGAGTATATCATTGTCTGTCAGGATA 59.603 40.741 0.00 0.00 32.70 2.59
1786 1862 8.368668 ACAGCTTATTGTAGTTGGGAGTATATC 58.631 37.037 0.00 0.00 31.43 1.63
1792 1868 4.872691 CAGACAGCTTATTGTAGTTGGGAG 59.127 45.833 0.00 0.00 31.43 4.30
1793 1869 4.286032 ACAGACAGCTTATTGTAGTTGGGA 59.714 41.667 0.00 0.00 31.43 4.37
1794 1870 4.579869 ACAGACAGCTTATTGTAGTTGGG 58.420 43.478 0.00 0.00 31.43 4.12
1795 1871 7.667043 TTTACAGACAGCTTATTGTAGTTGG 57.333 36.000 0.00 0.00 31.43 3.77
1798 1874 9.084164 CGTTATTTACAGACAGCTTATTGTAGT 57.916 33.333 0.00 0.00 0.00 2.73
1799 1875 9.297586 TCGTTATTTACAGACAGCTTATTGTAG 57.702 33.333 0.00 0.00 0.00 2.74
1800 1876 9.642327 TTCGTTATTTACAGACAGCTTATTGTA 57.358 29.630 0.00 0.00 0.00 2.41
1801 1877 8.542497 TTCGTTATTTACAGACAGCTTATTGT 57.458 30.769 0.00 0.00 0.00 2.71
1806 1882 9.298774 GTAGTATTCGTTATTTACAGACAGCTT 57.701 33.333 0.00 0.00 0.00 3.74
1807 1883 8.464404 TGTAGTATTCGTTATTTACAGACAGCT 58.536 33.333 0.00 0.00 0.00 4.24
1808 1884 8.624701 TGTAGTATTCGTTATTTACAGACAGC 57.375 34.615 0.00 0.00 0.00 4.40
1820 1896 9.426837 ACAAACAGCTTATTGTAGTATTCGTTA 57.573 29.630 11.25 0.00 37.96 3.18
1821 1897 8.319143 ACAAACAGCTTATTGTAGTATTCGTT 57.681 30.769 11.25 0.00 37.96 3.85
1822 1898 7.900782 ACAAACAGCTTATTGTAGTATTCGT 57.099 32.000 11.25 0.00 37.96 3.85
1877 1953 7.061789 GTGTTGCCTTATTTTATACACACAAGC 59.938 37.037 0.00 0.00 35.66 4.01
1897 1973 2.336667 GCATTGGGTGTTATGTGTTGC 58.663 47.619 0.00 0.00 0.00 4.17
1955 2031 9.832445 CAAGGAGAAAAGCCTATATAAGTAACA 57.168 33.333 0.00 0.00 33.76 2.41
1963 2039 7.453141 AACCTACAAGGAGAAAAGCCTATAT 57.547 36.000 0.00 0.00 37.67 0.86
1966 2042 5.578157 AAACCTACAAGGAGAAAAGCCTA 57.422 39.130 0.00 0.00 37.67 3.93
1969 2045 6.819397 ATGTAAACCTACAAGGAGAAAAGC 57.181 37.500 0.00 0.00 41.36 3.51
1973 2049 8.832735 AGGAAATATGTAAACCTACAAGGAGAA 58.167 33.333 0.00 0.00 41.36 2.87
1977 2053 8.047310 ACAGAGGAAATATGTAAACCTACAAGG 58.953 37.037 0.00 0.00 41.36 3.61
2014 2090 9.601217 AAATAATGTAGTGATCTAAACGCTCTT 57.399 29.630 0.00 0.00 0.00 2.85
2047 2123 5.566469 AGGAATCGTGGGAAGATAAAACAA 58.434 37.500 0.00 0.00 0.00 2.83
2076 2152 4.160329 AGTCAGTCATCTGTAAGGGTTGA 58.840 43.478 0.00 0.00 41.91 3.18
2141 2232 9.506018 CCACCAAAATTTCTATGAAAATCCTTT 57.494 29.630 0.00 0.00 0.00 3.11
2194 2285 9.643693 GAATCCTATGAATCAAACAAACAACAT 57.356 29.630 0.00 0.00 0.00 2.71
2196 2287 9.474920 TTGAATCCTATGAATCAAACAAACAAC 57.525 29.630 0.00 0.00 37.44 3.32
2197 2288 9.695526 CTTGAATCCTATGAATCAAACAAACAA 57.304 29.630 0.99 0.00 39.33 2.83
2198 2289 7.814107 GCTTGAATCCTATGAATCAAACAAACA 59.186 33.333 0.99 0.00 39.33 2.83
2199 2290 7.814107 TGCTTGAATCCTATGAATCAAACAAAC 59.186 33.333 0.96 0.00 39.33 2.93
2201 2292 7.465353 TGCTTGAATCCTATGAATCAAACAA 57.535 32.000 0.96 0.00 39.33 2.83
2253 2344 8.325046 GGATGCTAGAAATCTATGGGAAATAGT 58.675 37.037 0.00 0.00 0.00 2.12
2259 2350 5.158141 AGTGGATGCTAGAAATCTATGGGA 58.842 41.667 0.00 0.00 0.00 4.37
2260 2351 5.012458 TGAGTGGATGCTAGAAATCTATGGG 59.988 44.000 0.00 0.00 0.00 4.00
2275 2367 5.416952 ACTTTTAAGCAGGATTGAGTGGATG 59.583 40.000 0.00 0.00 0.00 3.51
2299 2391 7.953005 TGCATCATAGGAAAAACAAAGGATA 57.047 32.000 0.00 0.00 0.00 2.59
2317 2409 4.412796 TTTGGGTTGTTTGATTGCATCA 57.587 36.364 0.00 0.00 37.55 3.07
2335 2427 9.117183 TGATCATCTCAATCCTACAAGATTTTG 57.883 33.333 0.00 0.00 40.24 2.44
2342 2434 7.128234 TGTCATGATCATCTCAATCCTACAA 57.872 36.000 4.86 0.00 37.44 2.41
2346 2438 6.838382 TGAATGTCATGATCATCTCAATCCT 58.162 36.000 4.86 0.00 37.44 3.24
2385 2477 4.775253 GGATTGTAAAAACCCTGGAATGGA 59.225 41.667 0.00 0.00 0.00 3.41
2387 2479 6.435904 TGTAGGATTGTAAAAACCCTGGAATG 59.564 38.462 0.00 0.00 0.00 2.67
2406 2498 7.453393 AGATTGTGTCTCTTTGATTTGTAGGA 58.547 34.615 0.00 0.00 28.45 2.94
2407 2499 7.678947 AGATTGTGTCTCTTTGATTTGTAGG 57.321 36.000 0.00 0.00 28.45 3.18
2410 2502 7.814264 AGAAGATTGTGTCTCTTTGATTTGT 57.186 32.000 0.00 0.00 35.67 2.83
2423 2515 4.262592 GGCCCAAAATCAAGAAGATTGTGT 60.263 41.667 0.00 0.00 46.35 3.72
2434 2527 0.468214 TGTCGTGGGCCCAAAATCAA 60.468 50.000 30.64 7.63 0.00 2.57
2437 2530 0.757188 TTGTGTCGTGGGCCCAAAAT 60.757 50.000 30.64 0.00 0.00 1.82
2467 2560 1.983691 CTGGATGGCCACATAGAGGAT 59.016 52.381 8.16 0.00 39.92 3.24
2469 2562 1.071385 GACTGGATGGCCACATAGAGG 59.929 57.143 8.16 0.00 39.92 3.69
2471 2564 1.878211 TGACTGGATGGCCACATAGA 58.122 50.000 8.16 0.00 39.92 1.98
2472 2565 2.715749 TTGACTGGATGGCCACATAG 57.284 50.000 8.16 9.18 39.92 2.23
2473 2566 2.509131 TGATTGACTGGATGGCCACATA 59.491 45.455 8.16 0.00 39.92 2.29
2474 2567 1.285667 TGATTGACTGGATGGCCACAT 59.714 47.619 8.16 0.00 39.92 3.21
2475 2568 0.697658 TGATTGACTGGATGGCCACA 59.302 50.000 8.16 0.36 39.92 4.17
2476 2569 1.679680 CATGATTGACTGGATGGCCAC 59.320 52.381 8.16 1.35 39.92 5.01
2477 2570 2.025344 GCATGATTGACTGGATGGCCA 61.025 52.381 8.56 8.56 43.47 5.36
2478 2571 0.672342 GCATGATTGACTGGATGGCC 59.328 55.000 0.00 0.00 0.00 5.36
2479 2572 1.607628 GAGCATGATTGACTGGATGGC 59.392 52.381 0.00 0.00 0.00 4.40
2480 2573 1.871676 CGAGCATGATTGACTGGATGG 59.128 52.381 0.00 0.00 0.00 3.51
2481 2574 1.871676 CCGAGCATGATTGACTGGATG 59.128 52.381 0.00 0.00 0.00 3.51
2482 2575 1.487976 ACCGAGCATGATTGACTGGAT 59.512 47.619 0.00 0.00 0.00 3.41
2483 2576 0.904649 ACCGAGCATGATTGACTGGA 59.095 50.000 0.00 0.00 0.00 3.86
2484 2577 1.012086 CACCGAGCATGATTGACTGG 58.988 55.000 0.00 0.00 0.00 4.00
2485 2578 1.931841 CTCACCGAGCATGATTGACTG 59.068 52.381 0.00 0.00 0.00 3.51
2486 2579 1.552337 ACTCACCGAGCATGATTGACT 59.448 47.619 0.00 0.00 32.04 3.41
2487 2580 2.015736 ACTCACCGAGCATGATTGAC 57.984 50.000 0.00 0.00 32.04 3.18
2488 2581 3.493176 CCATACTCACCGAGCATGATTGA 60.493 47.826 0.00 0.00 35.97 2.57
2489 2582 2.804527 CCATACTCACCGAGCATGATTG 59.195 50.000 0.00 0.00 35.97 2.67
2490 2583 2.435805 ACCATACTCACCGAGCATGATT 59.564 45.455 0.00 0.00 35.97 2.57
2491 2584 2.042464 ACCATACTCACCGAGCATGAT 58.958 47.619 0.00 0.00 35.97 2.45
2492 2585 1.136891 CACCATACTCACCGAGCATGA 59.863 52.381 0.00 0.00 35.97 3.07
2493 2586 1.134699 ACACCATACTCACCGAGCATG 60.135 52.381 0.00 0.00 34.28 4.06
2494 2587 1.195115 ACACCATACTCACCGAGCAT 58.805 50.000 0.00 0.00 32.04 3.79
2495 2588 0.973632 AACACCATACTCACCGAGCA 59.026 50.000 0.00 0.00 32.04 4.26
2496 2589 1.641577 GAACACCATACTCACCGAGC 58.358 55.000 0.00 0.00 32.04 5.03
2497 2590 1.548719 TGGAACACCATACTCACCGAG 59.451 52.381 0.00 0.00 35.52 4.63
2498 2591 1.634960 TGGAACACCATACTCACCGA 58.365 50.000 0.00 0.00 0.00 4.69
2511 2604 1.524961 ACGAAGTGCAGGTGGAACA 59.475 52.632 0.00 0.00 42.51 3.18
2512 2605 4.456806 ACGAAGTGCAGGTGGAAC 57.543 55.556 0.00 0.00 42.51 3.62
2528 2621 1.284982 AAGTGCGACATCGTGCTGAC 61.285 55.000 2.85 0.00 42.22 3.51
2529 2622 1.006220 AAGTGCGACATCGTGCTGA 60.006 52.632 2.85 0.00 42.22 4.26
2530 2623 1.131218 CAAGTGCGACATCGTGCTG 59.869 57.895 2.85 0.00 42.22 4.41
2531 2624 2.671177 GCAAGTGCGACATCGTGCT 61.671 57.895 2.85 0.00 42.22 4.40
2532 2625 2.202222 GCAAGTGCGACATCGTGC 60.202 61.111 2.85 1.15 42.22 5.34
2542 2635 2.979197 CTGCAGGCTGAGCAAGTGC 61.979 63.158 20.86 15.98 42.17 4.40
2543 2636 0.321034 TACTGCAGGCTGAGCAAGTG 60.321 55.000 20.86 1.16 42.17 3.16
2544 2637 0.617413 ATACTGCAGGCTGAGCAAGT 59.383 50.000 20.86 16.66 42.17 3.16
2545 2638 1.747709 AATACTGCAGGCTGAGCAAG 58.252 50.000 20.86 11.65 42.17 4.01
2546 2639 2.205022 AAATACTGCAGGCTGAGCAA 57.795 45.000 20.86 5.51 42.17 3.91
2551 2644 3.005684 TCAACCAAAAATACTGCAGGCTG 59.994 43.478 19.93 10.94 0.00 4.85
2558 2651 5.540911 ACAAGGCATCAACCAAAAATACTG 58.459 37.500 0.00 0.00 0.00 2.74
2574 2667 0.620556 GATCTCCCTCCAACAAGGCA 59.379 55.000 0.00 0.00 37.29 4.75
2580 2673 4.203226 GAGGAAATTGATCTCCCTCCAAC 58.797 47.826 0.00 0.00 37.91 3.77
2598 2691 0.976641 AACATCCAAGAGCGTGAGGA 59.023 50.000 0.00 0.00 34.12 3.71
2618 2711 5.722021 AATTGCCGGTGTTCTCTAAAAAT 57.278 34.783 1.90 0.00 0.00 1.82
2623 2716 4.638421 CCAATAAATTGCCGGTGTTCTCTA 59.362 41.667 1.90 0.00 36.48 2.43
2631 2724 3.511934 TGCTTAACCAATAAATTGCCGGT 59.488 39.130 1.90 0.00 36.48 5.28
2633 2726 5.347342 TGATGCTTAACCAATAAATTGCCG 58.653 37.500 0.00 0.00 36.48 5.69
2634 2727 7.334171 ACTTTGATGCTTAACCAATAAATTGCC 59.666 33.333 0.00 0.00 36.48 4.52
2635 2728 8.255394 ACTTTGATGCTTAACCAATAAATTGC 57.745 30.769 0.00 0.00 36.48 3.56
2646 2739 9.974750 GAAGACTATGTAACTTTGATGCTTAAC 57.025 33.333 0.00 0.00 0.00 2.01
2654 2747 7.907389 ACATCCTGAAGACTATGTAACTTTGA 58.093 34.615 0.00 0.00 30.99 2.69
2674 2769 2.910688 TTCTGCTCCGGATTACATCC 57.089 50.000 3.57 0.00 46.22 3.51
2678 2773 5.106317 TGTTTTTCATTCTGCTCCGGATTAC 60.106 40.000 3.57 0.00 0.00 1.89
2679 2774 5.007034 TGTTTTTCATTCTGCTCCGGATTA 58.993 37.500 3.57 0.00 0.00 1.75
2705 2800 9.649024 GTAAGTCGTGTATGAATTCTACTAGTC 57.351 37.037 7.05 4.24 0.00 2.59
2707 2802 8.838365 AGGTAAGTCGTGTATGAATTCTACTAG 58.162 37.037 7.05 0.00 0.00 2.57
2708 2803 8.743085 AGGTAAGTCGTGTATGAATTCTACTA 57.257 34.615 7.05 0.00 0.00 1.82
2709 2804 7.642082 AGGTAAGTCGTGTATGAATTCTACT 57.358 36.000 7.05 0.00 0.00 2.57
2710 2805 7.585573 CGTAGGTAAGTCGTGTATGAATTCTAC 59.414 40.741 7.05 7.42 0.00 2.59
2711 2806 7.495606 TCGTAGGTAAGTCGTGTATGAATTCTA 59.504 37.037 7.05 0.00 0.00 2.10
2712 2807 6.317140 TCGTAGGTAAGTCGTGTATGAATTCT 59.683 38.462 7.05 0.00 0.00 2.40
2713 2808 6.489675 TCGTAGGTAAGTCGTGTATGAATTC 58.510 40.000 0.00 0.00 0.00 2.17
2731 2828 2.354821 GGCCTTTAAGCATGTTCGTAGG 59.645 50.000 0.00 0.00 0.00 3.18
2733 2830 2.745281 GTGGCCTTTAAGCATGTTCGTA 59.255 45.455 3.32 0.00 0.00 3.43
2735 2832 1.135402 GGTGGCCTTTAAGCATGTTCG 60.135 52.381 3.32 0.00 0.00 3.95
2746 2843 1.073199 CTTCACCTCGGTGGCCTTT 59.927 57.895 15.58 0.00 45.43 3.11
2769 2866 8.959548 TGTAGTTGATATCAAACTTGCATCAAT 58.040 29.630 19.55 0.00 39.37 2.57
2774 2871 7.443879 TCAGTTGTAGTTGATATCAAACTTGCA 59.556 33.333 19.55 14.10 37.63 4.08
2790 2887 2.287427 CGTCTGTCGGTTCAGTTGTAGT 60.287 50.000 0.00 0.00 36.85 2.73
2832 2929 3.423154 GCTGGTTGAACGCCTCCG 61.423 66.667 0.00 0.00 41.14 4.63
2873 2971 7.229707 GCTCATGAGTAGAACTATGAGAAGGTA 59.770 40.741 23.38 0.00 45.82 3.08
2879 2977 5.781210 TGGCTCATGAGTAGAACTATGAG 57.219 43.478 23.38 0.00 45.75 2.90
2890 2989 2.632377 CGGTATGTTTGGCTCATGAGT 58.368 47.619 23.38 4.85 0.00 3.41
2932 3039 3.399330 GAGTTGGAACCTGAATTCACGA 58.601 45.455 3.38 0.00 0.00 4.35
2964 3071 2.291741 GCACTGTTGCTTGTTCTAAGCT 59.708 45.455 12.24 0.00 46.17 3.74
2987 3094 0.323725 GCATGGACCATGAAGGGTGT 60.324 55.000 34.15 0.00 43.81 4.16
2989 3096 1.307647 GGCATGGACCATGAAGGGT 59.692 57.895 34.15 0.00 43.81 4.34
3004 3111 1.003118 CTAGGGCTAGTGTTGTTGGCA 59.997 52.381 0.00 0.00 0.00 4.92
3022 3129 3.610040 TTTGCGAGAAAGGCATCTCTA 57.390 42.857 15.47 5.00 43.00 2.43
3030 3137 7.471721 TGATACAACAATATTTGCGAGAAAGG 58.528 34.615 0.00 0.00 0.00 3.11
3038 3145 9.571810 TTTCATGTCTGATACAACAATATTTGC 57.428 29.630 0.00 0.00 42.70 3.68
3051 3159 9.166173 CAGGTACAATTCTTTTCATGTCTGATA 57.834 33.333 0.00 0.00 0.00 2.15
3080 3188 1.065928 CGTCTATCTTTCCGCCGCT 59.934 57.895 0.00 0.00 0.00 5.52
3093 3201 5.717078 AACCACTATTTCAGTCACGTCTA 57.283 39.130 0.00 0.00 34.26 2.59
3122 3230 3.931578 ACAAATCTGCACCTGAGACTAC 58.068 45.455 0.00 0.00 0.00 2.73
3168 3276 6.971527 TTGCCATGAAAATTCAAGCTTATG 57.028 33.333 17.20 0.00 41.13 1.90
3177 3285 4.259371 CGCGTTACATTGCCATGAAAATTC 60.259 41.667 4.52 0.00 34.11 2.17
3181 3289 1.135546 CCGCGTTACATTGCCATGAAA 60.136 47.619 4.92 0.00 34.11 2.69
3190 3298 1.722011 CTCCTCAACCGCGTTACATT 58.278 50.000 4.92 0.00 0.00 2.71
3194 3302 2.221906 GAGGCTCCTCAACCGCGTTA 62.222 60.000 10.90 0.00 42.31 3.18
3196 3304 4.070552 GAGGCTCCTCAACCGCGT 62.071 66.667 10.90 0.00 42.31 6.01
3227 3335 2.198827 TGGGATGCACGAAATTCTGT 57.801 45.000 0.00 0.00 0.00 3.41
3257 3365 4.818546 AGCTACAATCATGGTTGATGCTAC 59.181 41.667 28.01 13.01 41.83 3.58
3258 3366 5.039920 AGCTACAATCATGGTTGATGCTA 57.960 39.130 28.01 12.00 41.83 3.49
3261 3369 5.823209 TGAAGCTACAATCATGGTTGATG 57.177 39.130 25.29 16.44 41.83 3.07
3262 3370 6.387041 CATGAAGCTACAATCATGGTTGAT 57.613 37.500 25.29 11.65 45.82 2.57
3263 3371 5.823209 CATGAAGCTACAATCATGGTTGA 57.177 39.130 25.29 8.03 45.82 3.18
3292 3400 0.524392 CTCGATTTCTCTCGCGTGCT 60.524 55.000 5.77 0.00 38.52 4.40
3329 3438 2.037121 TGACTTCTTCATGCGGTTCTCA 59.963 45.455 0.00 0.00 0.00 3.27
3336 3445 2.223112 CGGGAAATGACTTCTTCATGCG 60.223 50.000 0.00 0.00 44.86 4.73
3340 3449 1.821216 GCCGGGAAATGACTTCTTCA 58.179 50.000 2.18 0.00 39.11 3.02
3348 3457 2.435938 GTGAGCGCCGGGAAATGA 60.436 61.111 2.29 0.00 0.00 2.57
3359 3468 3.259633 AAGAGCAAGGGGGTGAGCG 62.260 63.158 0.00 0.00 0.00 5.03
3360 3469 1.676967 CAAGAGCAAGGGGGTGAGC 60.677 63.158 0.00 0.00 0.00 4.26
3361 3470 1.001641 CCAAGAGCAAGGGGGTGAG 60.002 63.158 0.00 0.00 0.00 3.51
3362 3471 3.170362 CCAAGAGCAAGGGGGTGA 58.830 61.111 0.00 0.00 0.00 4.02
3363 3472 2.677875 GCCAAGAGCAAGGGGGTG 60.678 66.667 0.00 0.00 42.97 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.