Multiple sequence alignment - TraesCS3A01G461100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G461100 chr3A 100.000 3679 0 0 976 4654 697252828 697249150 0.000000e+00 6794.0
1 TraesCS3A01G461100 chr3A 100.000 712 0 0 1 712 697253803 697253092 0.000000e+00 1315.0
2 TraesCS3A01G461100 chr3A 95.062 81 3 1 452 531 53550600 53550520 4.890000e-25 126.0
3 TraesCS3A01G461100 chr3D 93.581 2368 111 19 1918 4260 561102426 561100075 0.000000e+00 3493.0
4 TraesCS3A01G461100 chr3D 91.337 935 57 7 978 1899 561103413 561102490 0.000000e+00 1256.0
5 TraesCS3A01G461100 chr3D 87.886 421 34 6 1981 2384 561093925 561093505 3.260000e-131 479.0
6 TraesCS3A01G461100 chr3D 89.045 356 39 0 3286 3641 561092195 561091840 4.270000e-120 442.0
7 TraesCS3A01G461100 chr3D 92.481 133 10 0 4440 4572 561100020 561099888 1.710000e-44 191.0
8 TraesCS3A01G461100 chr3D 87.333 150 18 1 2269 2417 561101538 561101389 2.230000e-38 171.0
9 TraesCS3A01G461100 chr3D 95.238 105 4 1 607 710 561103537 561103433 1.040000e-36 165.0
10 TraesCS3A01G461100 chr3B 90.169 2543 186 31 1918 4436 747802750 747800248 0.000000e+00 3253.0
11 TraesCS3A01G461100 chr3B 93.204 412 26 2 980 1390 747803851 747803441 5.150000e-169 604.0
12 TraesCS3A01G461100 chr3B 89.083 458 37 5 1918 2367 817540084 817539632 1.460000e-154 556.0
13 TraesCS3A01G461100 chr3B 90.261 421 37 2 2898 3315 747782974 747782555 8.800000e-152 547.0
14 TraesCS3A01G461100 chr3B 92.208 308 23 1 1593 1899 710463256 710463563 7.150000e-118 435.0
15 TraesCS3A01G461100 chr3B 91.909 309 23 2 1593 1899 817540456 817540148 9.250000e-117 431.0
16 TraesCS3A01G461100 chr3B 89.931 288 24 2 1912 2199 710463622 710463904 2.650000e-97 366.0
17 TraesCS3A01G461100 chr3B 85.399 363 31 4 1981 2332 747704265 747703914 1.590000e-94 357.0
18 TraesCS3A01G461100 chr3B 91.416 233 20 0 1593 1825 285426687 285426919 2.090000e-83 320.0
19 TraesCS3A01G461100 chr3B 80.968 310 32 12 2109 2417 747802008 747801725 2.180000e-53 220.0
20 TraesCS3A01G461100 chr3B 92.958 142 9 1 2155 2295 747785110 747784969 6.100000e-49 206.0
21 TraesCS3A01G461100 chr3B 90.698 86 8 0 2898 2983 747703908 747703823 1.060000e-21 115.0
22 TraesCS3A01G461100 chr3B 93.617 47 1 1 2290 2334 747783031 747782985 8.360000e-08 69.4
23 TraesCS3A01G461100 chr7B 91.883 308 24 1 1593 1899 604534315 604534622 3.330000e-116 429.0
24 TraesCS3A01G461100 chr7B 89.583 288 25 2 1912 2199 604534680 604534962 1.230000e-95 361.0
25 TraesCS3A01G461100 chr7B 89.041 292 26 3 1912 2203 689376452 689376737 1.590000e-94 357.0
26 TraesCS3A01G461100 chr2B 90.909 308 27 1 1593 1899 40807669 40807362 3.350000e-111 412.0
27 TraesCS3A01G461100 chr2B 88.652 282 27 2 1918 2199 40807298 40807022 5.770000e-89 339.0
28 TraesCS3A01G461100 chr4B 90.584 308 28 1 1593 1899 84333228 84333535 1.560000e-109 407.0
29 TraesCS3A01G461100 chr4B 89.236 288 26 2 1912 2199 84333593 84333875 5.730000e-94 355.0
30 TraesCS3A01G461100 chr4B 91.845 233 19 0 1593 1825 402224607 402224839 4.490000e-85 326.0
31 TraesCS3A01G461100 chr5B 92.704 233 17 0 1593 1825 676301147 676301379 2.070000e-88 337.0
32 TraesCS3A01G461100 chr5B 90.217 92 9 0 2216 2307 46148329 46148238 2.270000e-23 121.0
33 TraesCS3A01G461100 chr4A 81.851 281 29 6 1929 2188 488492733 488492454 2.820000e-52 217.0
34 TraesCS3A01G461100 chr4A 100.000 74 0 0 452 525 465215875 465215802 2.260000e-28 137.0
35 TraesCS3A01G461100 chr4A 98.667 75 1 0 452 526 612118144 612118070 2.920000e-27 134.0
36 TraesCS3A01G461100 chr4A 91.837 49 2 1 4477 4525 165711858 165711904 3.010000e-07 67.6
37 TraesCS3A01G461100 chr7A 100.000 75 0 0 452 526 71448945 71449019 6.280000e-29 139.0
38 TraesCS3A01G461100 chr7A 98.649 74 1 0 452 525 696410103 696410030 1.050000e-26 132.0
39 TraesCS3A01G461100 chr7A 94.595 37 2 0 4491 4527 670284925 670284961 1.810000e-04 58.4
40 TraesCS3A01G461100 chr7A 96.970 33 1 0 4479 4511 556289462 556289494 6.510000e-04 56.5
41 TraesCS3A01G461100 chr5A 98.684 76 1 0 452 527 483383335 483383260 8.120000e-28 135.0
42 TraesCS3A01G461100 chr5A 98.649 74 1 0 452 525 544636436 544636509 1.050000e-26 132.0
43 TraesCS3A01G461100 chr2A 98.611 72 1 0 452 523 513828599 513828528 1.360000e-25 128.0
44 TraesCS3A01G461100 chr5D 93.827 81 5 0 452 532 236223068 236222988 6.320000e-24 122.0
45 TraesCS3A01G461100 chr6A 92.308 39 3 0 4487 4525 15377113 15377151 6.510000e-04 56.5
46 TraesCS3A01G461100 chr1B 100.000 28 0 0 4497 4524 384301538 384301511 8.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G461100 chr3A 697249150 697253803 4653 True 4054.500000 6794 100.000000 1 4654 2 chr3A.!!$R2 4653
1 TraesCS3A01G461100 chr3D 561099888 561103537 3649 True 1055.200000 3493 91.994000 607 4572 5 chr3D.!!$R2 3965
2 TraesCS3A01G461100 chr3D 561091840 561093925 2085 True 460.500000 479 88.465500 1981 3641 2 chr3D.!!$R1 1660
3 TraesCS3A01G461100 chr3B 747800248 747803851 3603 True 1359.000000 3253 88.113667 980 4436 3 chr3B.!!$R3 3456
4 TraesCS3A01G461100 chr3B 817539632 817540456 824 True 493.500000 556 90.496000 1593 2367 2 chr3B.!!$R4 774
5 TraesCS3A01G461100 chr3B 710463256 710463904 648 False 400.500000 435 91.069500 1593 2199 2 chr3B.!!$F2 606
6 TraesCS3A01G461100 chr3B 747782555 747785110 2555 True 274.133333 547 92.278667 2155 3315 3 chr3B.!!$R2 1160
7 TraesCS3A01G461100 chr7B 604534315 604534962 647 False 395.000000 429 90.733000 1593 2199 2 chr7B.!!$F2 606
8 TraesCS3A01G461100 chr2B 40807022 40807669 647 True 375.500000 412 89.780500 1593 2199 2 chr2B.!!$R1 606
9 TraesCS3A01G461100 chr4B 84333228 84333875 647 False 381.000000 407 89.910000 1593 2199 2 chr4B.!!$F2 606

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
378 379 0.108138 AAAATCCGAGAGACGCCCAG 60.108 55.0 0.00 0.00 41.07 4.45 F
502 503 0.383737 GCGACGACATTTTGACGCAA 60.384 50.0 10.42 0.00 44.29 4.85 F
1247 1248 0.525029 GGTAGCTTACGTCGACTGGC 60.525 60.0 14.70 11.68 0.00 4.85 F
1393 1394 0.248054 GTGGTGTGTTGTGCTTCGTG 60.248 55.0 0.00 0.00 0.00 4.35 F
1394 1395 0.675208 TGGTGTGTTGTGCTTCGTGT 60.675 50.0 0.00 0.00 0.00 4.49 F
2804 5015 0.881796 GTTAGGTTTGGAGGTGCTGC 59.118 55.0 0.00 0.00 0.00 5.25 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1318 1319 0.171007 AATCGGGCAATCGCACAAAG 59.829 50.000 0.00 0.0 44.10 2.77 R
1359 1360 0.687354 ACCACCTAGCAGAACACAGG 59.313 55.000 0.00 0.0 0.00 4.00 R
2621 4824 0.669077 ACGAGTTATAGCTCCGCCTG 59.331 55.000 10.63 0.0 32.11 4.85 R
2676 4880 1.530293 CTGTGACAAGCAGAAGCAGAC 59.470 52.381 0.00 0.0 45.49 3.51 R
3273 6474 1.670811 CGATTGTACCATCCCAGCAAC 59.329 52.381 1.56 0.0 0.00 4.17 R
3726 6927 0.178975 TCGGGCATTTTGTCCACCTT 60.179 50.000 0.00 0.0 43.88 3.50 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.508200 TTCTTTTTACGAGGCACAATTGT 57.492 34.783 4.92 4.92 0.00 2.71
36 37 4.481930 CACAATTGTGCCTCTCGTAAAA 57.518 40.909 24.69 0.00 39.39 1.52
37 38 4.466828 CACAATTGTGCCTCTCGTAAAAG 58.533 43.478 24.69 0.00 39.39 2.27
38 39 3.058224 ACAATTGTGCCTCTCGTAAAAGC 60.058 43.478 11.07 0.00 0.00 3.51
39 40 2.248280 TTGTGCCTCTCGTAAAAGCA 57.752 45.000 0.00 0.00 0.00 3.91
40 41 2.248280 TGTGCCTCTCGTAAAAGCAA 57.752 45.000 0.00 0.00 34.79 3.91
41 42 2.566913 TGTGCCTCTCGTAAAAGCAAA 58.433 42.857 0.00 0.00 34.79 3.68
42 43 3.146066 TGTGCCTCTCGTAAAAGCAAAT 58.854 40.909 0.00 0.00 34.79 2.32
43 44 4.320023 TGTGCCTCTCGTAAAAGCAAATA 58.680 39.130 0.00 0.00 34.79 1.40
44 45 4.941263 TGTGCCTCTCGTAAAAGCAAATAT 59.059 37.500 0.00 0.00 34.79 1.28
45 46 5.163764 TGTGCCTCTCGTAAAAGCAAATATG 60.164 40.000 0.00 0.00 34.79 1.78
46 47 4.941263 TGCCTCTCGTAAAAGCAAATATGT 59.059 37.500 0.00 0.00 0.00 2.29
47 48 5.163764 TGCCTCTCGTAAAAGCAAATATGTG 60.164 40.000 0.00 0.00 0.00 3.21
48 49 5.266242 CCTCTCGTAAAAGCAAATATGTGC 58.734 41.667 10.09 10.09 45.28 4.57
49 50 5.229921 TCTCGTAAAAGCAAATATGTGCC 57.770 39.130 14.50 0.00 46.14 5.01
50 51 4.941263 TCTCGTAAAAGCAAATATGTGCCT 59.059 37.500 14.50 0.00 46.14 4.75
51 52 5.064707 TCTCGTAAAAGCAAATATGTGCCTC 59.935 40.000 14.50 0.61 46.14 4.70
52 53 4.095782 TCGTAAAAGCAAATATGTGCCTCC 59.904 41.667 14.50 0.00 46.14 4.30
53 54 4.142491 CGTAAAAGCAAATATGTGCCTCCA 60.142 41.667 14.50 0.00 46.14 3.86
54 55 4.460948 AAAAGCAAATATGTGCCTCCAG 57.539 40.909 14.50 0.00 46.14 3.86
55 56 2.062971 AGCAAATATGTGCCTCCAGG 57.937 50.000 14.50 0.00 46.14 4.45
67 68 2.403252 CCTCCAGGCGAAGTAAATGT 57.597 50.000 0.00 0.00 0.00 2.71
68 69 2.009774 CCTCCAGGCGAAGTAAATGTG 58.990 52.381 0.00 0.00 0.00 3.21
69 70 2.615493 CCTCCAGGCGAAGTAAATGTGT 60.615 50.000 0.00 0.00 0.00 3.72
70 71 2.673368 CTCCAGGCGAAGTAAATGTGTC 59.327 50.000 0.00 0.00 0.00 3.67
71 72 1.737793 CCAGGCGAAGTAAATGTGTCC 59.262 52.381 0.00 0.00 0.00 4.02
72 73 1.737793 CAGGCGAAGTAAATGTGTCCC 59.262 52.381 0.00 0.00 0.00 4.46
73 74 1.628846 AGGCGAAGTAAATGTGTCCCT 59.371 47.619 0.00 0.00 0.00 4.20
74 75 2.007608 GGCGAAGTAAATGTGTCCCTC 58.992 52.381 0.00 0.00 0.00 4.30
75 76 2.354805 GGCGAAGTAAATGTGTCCCTCT 60.355 50.000 0.00 0.00 0.00 3.69
76 77 3.118884 GGCGAAGTAAATGTGTCCCTCTA 60.119 47.826 0.00 0.00 0.00 2.43
77 78 4.113354 GCGAAGTAAATGTGTCCCTCTAG 58.887 47.826 0.00 0.00 0.00 2.43
78 79 4.113354 CGAAGTAAATGTGTCCCTCTAGC 58.887 47.826 0.00 0.00 0.00 3.42
79 80 3.802948 AGTAAATGTGTCCCTCTAGCG 57.197 47.619 0.00 0.00 0.00 4.26
80 81 3.362706 AGTAAATGTGTCCCTCTAGCGA 58.637 45.455 0.00 0.00 0.00 4.93
81 82 3.767673 AGTAAATGTGTCCCTCTAGCGAA 59.232 43.478 0.00 0.00 0.00 4.70
82 83 3.695830 AAATGTGTCCCTCTAGCGAAA 57.304 42.857 0.00 0.00 0.00 3.46
83 84 2.969628 ATGTGTCCCTCTAGCGAAAG 57.030 50.000 0.00 0.00 0.00 2.62
84 85 1.919240 TGTGTCCCTCTAGCGAAAGA 58.081 50.000 0.00 0.00 0.00 2.52
85 86 2.244695 TGTGTCCCTCTAGCGAAAGAA 58.755 47.619 0.00 0.00 0.00 2.52
86 87 2.631062 TGTGTCCCTCTAGCGAAAGAAA 59.369 45.455 0.00 0.00 0.00 2.52
87 88 3.070446 TGTGTCCCTCTAGCGAAAGAAAA 59.930 43.478 0.00 0.00 0.00 2.29
88 89 4.062991 GTGTCCCTCTAGCGAAAGAAAAA 58.937 43.478 0.00 0.00 0.00 1.94
106 107 3.620427 AAAAACGTGCTTTCCCCTTTT 57.380 38.095 0.00 0.00 0.00 2.27
107 108 2.882927 AAACGTGCTTTCCCCTTTTC 57.117 45.000 0.00 0.00 0.00 2.29
108 109 1.770294 AACGTGCTTTCCCCTTTTCA 58.230 45.000 0.00 0.00 0.00 2.69
109 110 1.770294 ACGTGCTTTCCCCTTTTCAA 58.230 45.000 0.00 0.00 0.00 2.69
110 111 1.681264 ACGTGCTTTCCCCTTTTCAAG 59.319 47.619 0.00 0.00 0.00 3.02
119 120 3.986970 CCTTTTCAAGGGGCACAAC 57.013 52.632 0.00 0.00 45.27 3.32
120 121 1.118838 CCTTTTCAAGGGGCACAACA 58.881 50.000 0.00 0.00 45.27 3.33
121 122 1.484240 CCTTTTCAAGGGGCACAACAA 59.516 47.619 0.00 0.00 45.27 2.83
122 123 2.104622 CCTTTTCAAGGGGCACAACAAT 59.895 45.455 0.00 0.00 45.27 2.71
123 124 2.906691 TTTCAAGGGGCACAACAATG 57.093 45.000 0.00 0.00 0.00 2.82
124 125 0.392336 TTCAAGGGGCACAACAATGC 59.608 50.000 0.00 0.00 45.34 3.56
132 133 0.232816 GCACAACAATGCCTTTTGCG 59.767 50.000 0.00 0.00 45.60 4.85
133 134 0.860533 CACAACAATGCCTTTTGCGG 59.139 50.000 0.00 0.00 45.60 5.69
134 135 0.749649 ACAACAATGCCTTTTGCGGA 59.250 45.000 0.00 0.00 45.60 5.54
135 136 1.137872 ACAACAATGCCTTTTGCGGAA 59.862 42.857 0.00 0.00 45.60 4.30
136 137 1.794116 CAACAATGCCTTTTGCGGAAG 59.206 47.619 0.00 0.00 45.60 3.46
137 138 1.039856 ACAATGCCTTTTGCGGAAGT 58.960 45.000 0.00 0.00 45.60 3.01
138 139 2.235016 ACAATGCCTTTTGCGGAAGTA 58.765 42.857 0.00 0.00 45.60 2.24
139 140 2.625790 ACAATGCCTTTTGCGGAAGTAA 59.374 40.909 0.00 0.00 45.60 2.24
140 141 3.068873 ACAATGCCTTTTGCGGAAGTAAA 59.931 39.130 0.00 0.00 45.60 2.01
141 142 2.785713 TGCCTTTTGCGGAAGTAAAC 57.214 45.000 0.00 0.00 45.23 2.01
142 143 2.025155 TGCCTTTTGCGGAAGTAAACA 58.975 42.857 0.00 0.00 45.23 2.83
143 144 2.625790 TGCCTTTTGCGGAAGTAAACAT 59.374 40.909 0.00 0.00 45.23 2.71
144 145 2.986479 GCCTTTTGCGGAAGTAAACATG 59.014 45.455 0.00 0.00 45.23 3.21
145 146 3.552068 GCCTTTTGCGGAAGTAAACATGT 60.552 43.478 0.00 0.00 45.23 3.21
146 147 3.980775 CCTTTTGCGGAAGTAAACATGTG 59.019 43.478 0.00 0.00 45.23 3.21
147 148 2.697431 TTGCGGAAGTAAACATGTGC 57.303 45.000 0.00 0.00 31.06 4.57
148 149 0.878416 TGCGGAAGTAAACATGTGCC 59.122 50.000 0.00 0.00 0.00 5.01
149 150 1.165270 GCGGAAGTAAACATGTGCCT 58.835 50.000 0.00 0.00 0.00 4.75
150 151 1.130561 GCGGAAGTAAACATGTGCCTC 59.869 52.381 0.00 0.00 0.00 4.70
151 152 1.737793 CGGAAGTAAACATGTGCCTCC 59.262 52.381 0.00 1.16 0.00 4.30
152 153 2.790433 GGAAGTAAACATGTGCCTCCA 58.210 47.619 0.00 0.00 0.00 3.86
153 154 2.488153 GGAAGTAAACATGTGCCTCCAC 59.512 50.000 0.00 0.00 42.40 4.02
154 155 1.808411 AGTAAACATGTGCCTCCACG 58.192 50.000 0.00 0.00 45.04 4.94
155 156 1.346395 AGTAAACATGTGCCTCCACGA 59.654 47.619 0.00 0.00 45.04 4.35
156 157 1.732259 GTAAACATGTGCCTCCACGAG 59.268 52.381 0.00 0.00 45.04 4.18
157 158 0.396435 AAACATGTGCCTCCACGAGA 59.604 50.000 0.00 0.00 45.04 4.04
158 159 0.396435 AACATGTGCCTCCACGAGAA 59.604 50.000 0.00 0.00 45.04 2.87
159 160 0.396435 ACATGTGCCTCCACGAGAAA 59.604 50.000 0.00 0.00 45.04 2.52
160 161 0.798776 CATGTGCCTCCACGAGAAAC 59.201 55.000 0.00 0.00 45.04 2.78
161 162 0.396435 ATGTGCCTCCACGAGAAACA 59.604 50.000 0.00 0.00 45.04 2.83
162 163 0.179234 TGTGCCTCCACGAGAAACAA 59.821 50.000 0.00 0.00 45.04 2.83
163 164 1.305201 GTGCCTCCACGAGAAACAAA 58.695 50.000 0.00 0.00 31.34 2.83
164 165 1.880027 GTGCCTCCACGAGAAACAAAT 59.120 47.619 0.00 0.00 31.34 2.32
165 166 2.293399 GTGCCTCCACGAGAAACAAATT 59.707 45.455 0.00 0.00 31.34 1.82
166 167 2.955660 TGCCTCCACGAGAAACAAATTT 59.044 40.909 0.00 0.00 0.00 1.82
167 168 4.023536 GTGCCTCCACGAGAAACAAATTTA 60.024 41.667 0.00 0.00 31.34 1.40
168 169 4.764823 TGCCTCCACGAGAAACAAATTTAT 59.235 37.500 0.00 0.00 0.00 1.40
169 170 5.941058 TGCCTCCACGAGAAACAAATTTATA 59.059 36.000 0.00 0.00 0.00 0.98
170 171 6.128117 TGCCTCCACGAGAAACAAATTTATAC 60.128 38.462 0.00 0.00 0.00 1.47
171 172 6.677187 GCCTCCACGAGAAACAAATTTATACC 60.677 42.308 0.00 0.00 0.00 2.73
172 173 6.598064 CCTCCACGAGAAACAAATTTATACCT 59.402 38.462 0.00 0.00 0.00 3.08
173 174 7.201617 CCTCCACGAGAAACAAATTTATACCTC 60.202 40.741 0.00 0.00 0.00 3.85
174 175 7.391620 TCCACGAGAAACAAATTTATACCTCT 58.608 34.615 0.00 0.00 0.00 3.69
175 176 7.881232 TCCACGAGAAACAAATTTATACCTCTT 59.119 33.333 0.00 0.00 0.00 2.85
176 177 7.962918 CCACGAGAAACAAATTTATACCTCTTG 59.037 37.037 0.00 0.84 0.00 3.02
177 178 7.481798 CACGAGAAACAAATTTATACCTCTTGC 59.518 37.037 0.00 0.00 0.00 4.01
178 179 6.682863 CGAGAAACAAATTTATACCTCTTGCG 59.317 38.462 0.00 0.00 0.00 4.85
179 180 7.412563 CGAGAAACAAATTTATACCTCTTGCGA 60.413 37.037 0.00 0.00 0.00 5.10
180 181 8.106247 AGAAACAAATTTATACCTCTTGCGAA 57.894 30.769 0.00 0.00 0.00 4.70
181 182 8.573035 AGAAACAAATTTATACCTCTTGCGAAA 58.427 29.630 0.00 0.00 0.00 3.46
182 183 9.353999 GAAACAAATTTATACCTCTTGCGAAAT 57.646 29.630 0.00 0.00 0.00 2.17
220 221 7.891183 TTTTTCTCTTTCTTCTCACGGATAG 57.109 36.000 0.00 0.00 0.00 2.08
221 222 6.835819 TTTCTCTTTCTTCTCACGGATAGA 57.164 37.500 0.00 0.00 0.00 1.98
222 223 6.835819 TTCTCTTTCTTCTCACGGATAGAA 57.164 37.500 0.00 0.00 0.00 2.10
223 224 6.835819 TCTCTTTCTTCTCACGGATAGAAA 57.164 37.500 0.00 0.00 35.83 2.52
228 229 5.977489 TCTTCTCACGGATAGAAAGAACA 57.023 39.130 0.00 0.00 32.77 3.18
229 230 6.531503 TCTTCTCACGGATAGAAAGAACAT 57.468 37.500 0.00 0.00 32.77 2.71
230 231 6.936279 TCTTCTCACGGATAGAAAGAACATT 58.064 36.000 0.00 0.00 32.77 2.71
231 232 7.036220 TCTTCTCACGGATAGAAAGAACATTC 58.964 38.462 0.00 0.00 32.77 2.67
232 233 6.531503 TCTCACGGATAGAAAGAACATTCT 57.468 37.500 0.00 0.00 42.21 2.40
245 246 5.859205 AGAACATTCTTTTTCTTGCAGGT 57.141 34.783 0.00 0.00 32.55 4.00
246 247 5.594926 AGAACATTCTTTTTCTTGCAGGTG 58.405 37.500 0.00 0.00 32.55 4.00
247 248 3.721035 ACATTCTTTTTCTTGCAGGTGC 58.279 40.909 0.00 0.00 42.50 5.01
248 249 3.385755 ACATTCTTTTTCTTGCAGGTGCT 59.614 39.130 3.18 0.00 42.66 4.40
249 250 4.141869 ACATTCTTTTTCTTGCAGGTGCTT 60.142 37.500 3.18 0.00 42.66 3.91
250 251 5.068987 ACATTCTTTTTCTTGCAGGTGCTTA 59.931 36.000 3.18 0.00 42.66 3.09
251 252 5.789643 TTCTTTTTCTTGCAGGTGCTTAT 57.210 34.783 3.18 0.00 42.66 1.73
252 253 5.789643 TCTTTTTCTTGCAGGTGCTTATT 57.210 34.783 3.18 0.00 42.66 1.40
253 254 6.160576 TCTTTTTCTTGCAGGTGCTTATTT 57.839 33.333 3.18 0.00 42.66 1.40
254 255 6.581712 TCTTTTTCTTGCAGGTGCTTATTTT 58.418 32.000 3.18 0.00 42.66 1.82
255 256 7.047271 TCTTTTTCTTGCAGGTGCTTATTTTT 58.953 30.769 3.18 0.00 42.66 1.94
280 281 1.646540 TTTTTGAGTGTGCCTCGCG 59.353 52.632 0.00 0.00 43.64 5.87
281 282 2.387125 TTTTTGAGTGTGCCTCGCGC 62.387 55.000 0.00 0.00 43.64 6.86
285 286 4.961511 AGTGTGCCTCGCGCGAAA 62.962 61.111 33.99 19.17 42.51 3.46
286 287 4.430423 GTGTGCCTCGCGCGAAAG 62.430 66.667 33.99 27.08 42.51 2.62
300 301 2.693797 CGAAAGCAAGCATGTGTCTT 57.306 45.000 0.00 0.00 0.00 3.01
301 302 3.004024 CGAAAGCAAGCATGTGTCTTT 57.996 42.857 0.00 0.69 31.76 2.52
302 303 4.145876 CGAAAGCAAGCATGTGTCTTTA 57.854 40.909 0.00 0.00 30.31 1.85
303 304 4.536065 CGAAAGCAAGCATGTGTCTTTAA 58.464 39.130 0.00 0.00 30.31 1.52
304 305 4.614284 CGAAAGCAAGCATGTGTCTTTAAG 59.386 41.667 0.00 0.00 30.31 1.85
305 306 5.560760 CGAAAGCAAGCATGTGTCTTTAAGA 60.561 40.000 0.00 0.00 30.31 2.10
306 307 5.368256 AAGCAAGCATGTGTCTTTAAGAG 57.632 39.130 0.00 0.00 0.00 2.85
307 308 4.645535 AGCAAGCATGTGTCTTTAAGAGA 58.354 39.130 0.00 0.00 0.00 3.10
308 309 5.065914 AGCAAGCATGTGTCTTTAAGAGAA 58.934 37.500 0.00 0.00 35.79 2.87
309 310 5.180868 AGCAAGCATGTGTCTTTAAGAGAAG 59.819 40.000 0.00 0.00 35.79 2.85
310 311 5.388944 CAAGCATGTGTCTTTAAGAGAAGC 58.611 41.667 0.00 0.00 35.79 3.86
311 312 4.645535 AGCATGTGTCTTTAAGAGAAGCA 58.354 39.130 12.34 1.48 35.79 3.91
312 313 5.065914 AGCATGTGTCTTTAAGAGAAGCAA 58.934 37.500 12.34 0.00 35.79 3.91
313 314 5.532406 AGCATGTGTCTTTAAGAGAAGCAAA 59.468 36.000 12.34 0.00 35.79 3.68
314 315 6.039717 AGCATGTGTCTTTAAGAGAAGCAAAA 59.960 34.615 12.34 0.00 35.79 2.44
315 316 6.865205 GCATGTGTCTTTAAGAGAAGCAAAAT 59.135 34.615 0.00 0.00 35.79 1.82
316 317 7.383300 GCATGTGTCTTTAAGAGAAGCAAAATT 59.617 33.333 0.00 0.00 35.79 1.82
317 318 8.697067 CATGTGTCTTTAAGAGAAGCAAAATTG 58.303 33.333 0.00 0.00 35.79 2.32
318 319 7.771183 TGTGTCTTTAAGAGAAGCAAAATTGT 58.229 30.769 0.00 0.00 35.79 2.71
319 320 8.250332 TGTGTCTTTAAGAGAAGCAAAATTGTT 58.750 29.630 0.00 0.00 35.79 2.83
320 321 8.746751 GTGTCTTTAAGAGAAGCAAAATTGTTC 58.253 33.333 0.00 0.00 35.79 3.18
321 322 8.686334 TGTCTTTAAGAGAAGCAAAATTGTTCT 58.314 29.630 0.00 9.30 35.79 3.01
326 327 7.807977 AAGAGAAGCAAAATTGTTCTACTCA 57.192 32.000 0.00 0.00 32.60 3.41
327 328 7.195839 AGAGAAGCAAAATTGTTCTACTCAC 57.804 36.000 0.00 1.58 32.60 3.51
328 329 5.990408 AGAAGCAAAATTGTTCTACTCACG 58.010 37.500 8.32 0.00 31.53 4.35
329 330 5.758296 AGAAGCAAAATTGTTCTACTCACGA 59.242 36.000 0.00 0.00 31.53 4.35
330 331 6.260050 AGAAGCAAAATTGTTCTACTCACGAA 59.740 34.615 0.00 0.00 31.53 3.85
331 332 6.371809 AGCAAAATTGTTCTACTCACGAAA 57.628 33.333 0.00 0.00 0.00 3.46
332 333 6.430451 AGCAAAATTGTTCTACTCACGAAAG 58.570 36.000 0.00 0.00 0.00 2.62
333 334 5.625311 GCAAAATTGTTCTACTCACGAAAGG 59.375 40.000 0.00 0.00 0.00 3.11
334 335 6.512741 GCAAAATTGTTCTACTCACGAAAGGA 60.513 38.462 0.00 0.00 0.00 3.36
335 336 7.414436 CAAAATTGTTCTACTCACGAAAGGAA 58.586 34.615 0.00 0.00 0.00 3.36
336 337 7.562454 AAATTGTTCTACTCACGAAAGGAAA 57.438 32.000 0.00 0.00 0.00 3.13
337 338 7.562454 AATTGTTCTACTCACGAAAGGAAAA 57.438 32.000 0.00 0.00 0.00 2.29
338 339 6.988622 TTGTTCTACTCACGAAAGGAAAAA 57.011 33.333 0.00 0.00 0.00 1.94
374 375 5.720261 AATTAGAAAAATCCGAGAGACGC 57.280 39.130 0.00 0.00 41.07 5.19
375 376 2.011540 AGAAAAATCCGAGAGACGCC 57.988 50.000 0.00 0.00 41.07 5.68
376 377 1.007580 GAAAAATCCGAGAGACGCCC 58.992 55.000 0.00 0.00 41.07 6.13
377 378 0.323629 AAAAATCCGAGAGACGCCCA 59.676 50.000 0.00 0.00 41.07 5.36
378 379 0.108138 AAAATCCGAGAGACGCCCAG 60.108 55.000 0.00 0.00 41.07 4.45
379 380 2.579684 AAATCCGAGAGACGCCCAGC 62.580 60.000 0.00 0.00 41.07 4.85
381 382 3.842923 CCGAGAGACGCCCAGCAT 61.843 66.667 0.00 0.00 41.07 3.79
382 383 2.584418 CGAGAGACGCCCAGCATG 60.584 66.667 0.00 0.00 34.51 4.06
383 384 2.894387 GAGAGACGCCCAGCATGC 60.894 66.667 10.51 10.51 31.97 4.06
411 412 2.510906 AGCACGGCTCACCAAAGT 59.489 55.556 0.00 0.00 30.62 2.66
412 413 1.893808 AGCACGGCTCACCAAAGTG 60.894 57.895 0.00 0.00 46.00 3.16
425 426 4.664688 ACCAAAGTGATCCTTGGAGATT 57.335 40.909 19.73 1.12 32.32 2.40
426 427 5.003096 ACCAAAGTGATCCTTGGAGATTT 57.997 39.130 19.73 0.83 32.32 2.17
427 428 5.397360 ACCAAAGTGATCCTTGGAGATTTT 58.603 37.500 19.73 0.27 32.32 1.82
428 429 5.244626 ACCAAAGTGATCCTTGGAGATTTTG 59.755 40.000 19.73 6.63 32.32 2.44
429 430 5.477984 CCAAAGTGATCCTTGGAGATTTTGA 59.522 40.000 11.19 0.00 32.32 2.69
430 431 6.015180 CCAAAGTGATCCTTGGAGATTTTGAA 60.015 38.462 11.19 0.00 32.32 2.69
431 432 6.830873 AAGTGATCCTTGGAGATTTTGAAG 57.169 37.500 0.00 0.00 30.18 3.02
432 433 5.885465 AGTGATCCTTGGAGATTTTGAAGT 58.115 37.500 0.00 0.00 0.00 3.01
433 434 5.942826 AGTGATCCTTGGAGATTTTGAAGTC 59.057 40.000 0.00 0.00 0.00 3.01
434 435 5.124617 GTGATCCTTGGAGATTTTGAAGTCC 59.875 44.000 0.00 0.00 0.00 3.85
435 436 5.014544 TGATCCTTGGAGATTTTGAAGTCCT 59.985 40.000 0.00 0.00 0.00 3.85
436 437 5.324832 TCCTTGGAGATTTTGAAGTCCTT 57.675 39.130 0.00 0.00 0.00 3.36
437 438 5.705400 TCCTTGGAGATTTTGAAGTCCTTT 58.295 37.500 0.00 0.00 0.00 3.11
438 439 6.136155 TCCTTGGAGATTTTGAAGTCCTTTT 58.864 36.000 0.00 0.00 0.00 2.27
439 440 6.611236 TCCTTGGAGATTTTGAAGTCCTTTTT 59.389 34.615 0.00 0.00 0.00 1.94
458 459 1.448069 TTTTTCCTTTTGCCGGCCC 59.552 52.632 26.77 0.00 0.00 5.80
459 460 1.338136 TTTTTCCTTTTGCCGGCCCA 61.338 50.000 26.77 7.86 0.00 5.36
460 461 1.753368 TTTTCCTTTTGCCGGCCCAG 61.753 55.000 26.77 16.63 0.00 4.45
461 462 2.937959 TTTCCTTTTGCCGGCCCAGT 62.938 55.000 26.77 0.00 0.00 4.00
462 463 3.373565 CCTTTTGCCGGCCCAGTC 61.374 66.667 26.77 0.00 0.00 3.51
463 464 2.597217 CTTTTGCCGGCCCAGTCA 60.597 61.111 26.77 0.00 0.00 3.41
464 465 2.597217 TTTTGCCGGCCCAGTCAG 60.597 61.111 26.77 0.00 0.00 3.51
465 466 4.659172 TTTGCCGGCCCAGTCAGG 62.659 66.667 26.77 0.00 37.03 3.86
499 500 4.717917 GGCGACGACATTTTGACG 57.282 55.556 0.00 0.00 41.00 4.35
500 501 1.509162 GGCGACGACATTTTGACGC 60.509 57.895 7.32 7.32 38.98 5.19
501 502 1.203065 GCGACGACATTTTGACGCA 59.797 52.632 10.42 0.00 44.29 5.24
502 503 0.383737 GCGACGACATTTTGACGCAA 60.384 50.000 10.42 0.00 44.29 4.85
503 504 1.918112 GCGACGACATTTTGACGCAAA 60.918 47.619 10.42 1.63 44.29 3.68
504 505 1.962547 CGACGACATTTTGACGCAAAG 59.037 47.619 0.00 0.00 38.98 2.77
505 506 1.708680 GACGACATTTTGACGCAAAGC 59.291 47.619 0.00 0.00 38.98 3.51
516 517 4.670606 GCAAAGCGCGTCCAATAG 57.329 55.556 8.43 0.00 0.00 1.73
517 518 1.062525 GCAAAGCGCGTCCAATAGG 59.937 57.895 8.43 0.00 0.00 2.57
518 519 1.366111 GCAAAGCGCGTCCAATAGGA 61.366 55.000 8.43 0.00 43.21 2.94
519 520 0.652592 CAAAGCGCGTCCAATAGGAG 59.347 55.000 8.43 0.00 46.92 3.69
520 521 1.090052 AAAGCGCGTCCAATAGGAGC 61.090 55.000 8.43 0.00 46.92 4.70
521 522 1.961180 AAGCGCGTCCAATAGGAGCT 61.961 55.000 8.43 0.00 46.92 4.09
522 523 1.951631 GCGCGTCCAATAGGAGCTC 60.952 63.158 8.43 4.71 46.92 4.09
523 524 1.300233 CGCGTCCAATAGGAGCTCC 60.300 63.158 26.22 26.22 46.92 4.70
524 525 1.069935 GCGTCCAATAGGAGCTCCC 59.930 63.158 29.54 10.94 46.92 4.30
525 526 1.686325 GCGTCCAATAGGAGCTCCCA 61.686 60.000 29.54 17.52 46.92 4.37
526 527 1.051812 CGTCCAATAGGAGCTCCCAT 58.948 55.000 29.54 19.25 46.92 4.00
527 528 1.417890 CGTCCAATAGGAGCTCCCATT 59.582 52.381 29.54 24.21 46.92 3.16
528 529 2.158755 CGTCCAATAGGAGCTCCCATTT 60.159 50.000 29.54 16.94 46.92 2.32
529 530 3.685550 CGTCCAATAGGAGCTCCCATTTT 60.686 47.826 29.54 13.02 46.92 1.82
530 531 3.633986 GTCCAATAGGAGCTCCCATTTTG 59.366 47.826 29.54 23.58 46.92 2.44
531 532 3.527253 TCCAATAGGAGCTCCCATTTTGA 59.473 43.478 29.54 20.80 39.61 2.69
532 533 4.017591 TCCAATAGGAGCTCCCATTTTGAA 60.018 41.667 29.54 9.13 39.61 2.69
533 534 4.340381 CCAATAGGAGCTCCCATTTTGAAG 59.660 45.833 29.54 14.13 36.89 3.02
534 535 4.870021 ATAGGAGCTCCCATTTTGAAGT 57.130 40.909 29.54 9.11 37.41 3.01
535 536 3.078891 AGGAGCTCCCATTTTGAAGTC 57.921 47.619 29.54 0.00 37.41 3.01
536 537 2.646798 AGGAGCTCCCATTTTGAAGTCT 59.353 45.455 29.54 2.46 37.41 3.24
537 538 3.075134 AGGAGCTCCCATTTTGAAGTCTT 59.925 43.478 29.54 1.96 37.41 3.01
538 539 3.829026 GGAGCTCCCATTTTGAAGTCTTT 59.171 43.478 23.19 0.00 34.14 2.52
539 540 4.281941 GGAGCTCCCATTTTGAAGTCTTTT 59.718 41.667 23.19 0.00 34.14 2.27
540 541 5.221521 GGAGCTCCCATTTTGAAGTCTTTTT 60.222 40.000 23.19 0.00 34.14 1.94
570 571 7.609760 TCCTTTTTCCTTTTTCTTTGAAAGC 57.390 32.000 0.00 0.00 33.75 3.51
571 572 7.394016 TCCTTTTTCCTTTTTCTTTGAAAGCT 58.606 30.769 0.00 0.00 33.75 3.74
572 573 7.882791 TCCTTTTTCCTTTTTCTTTGAAAGCTT 59.117 29.630 0.00 0.00 33.75 3.74
573 574 8.514594 CCTTTTTCCTTTTTCTTTGAAAGCTTT 58.485 29.630 12.53 12.53 33.75 3.51
574 575 9.897744 CTTTTTCCTTTTTCTTTGAAAGCTTTT 57.102 25.926 14.05 0.00 33.75 2.27
576 577 9.891828 TTTTCCTTTTTCTTTGAAAGCTTTTTC 57.108 25.926 14.05 1.73 33.75 2.29
577 578 8.614469 TTCCTTTTTCTTTGAAAGCTTTTTCA 57.386 26.923 14.05 4.80 38.99 2.69
578 579 8.614469 TCCTTTTTCTTTGAAAGCTTTTTCAA 57.386 26.923 14.05 11.23 45.85 2.69
579 580 9.230122 TCCTTTTTCTTTGAAAGCTTTTTCAAT 57.770 25.926 14.05 0.00 46.47 2.57
589 590 8.931385 TGAAAGCTTTTTCAATATTCTATGGC 57.069 30.769 14.05 0.00 37.93 4.40
590 591 8.530311 TGAAAGCTTTTTCAATATTCTATGGCA 58.470 29.630 14.05 0.00 37.93 4.92
591 592 8.937634 AAAGCTTTTTCAATATTCTATGGCAG 57.062 30.769 5.69 0.00 0.00 4.85
592 593 7.047460 AGCTTTTTCAATATTCTATGGCAGG 57.953 36.000 0.00 0.00 0.00 4.85
593 594 6.041296 AGCTTTTTCAATATTCTATGGCAGGG 59.959 38.462 0.00 0.00 0.00 4.45
594 595 6.729690 TTTTTCAATATTCTATGGCAGGGG 57.270 37.500 0.00 0.00 0.00 4.79
595 596 3.439857 TCAATATTCTATGGCAGGGGC 57.560 47.619 0.00 0.00 40.13 5.80
596 597 2.988859 TCAATATTCTATGGCAGGGGCT 59.011 45.455 0.00 0.00 40.87 5.19
597 598 3.009473 TCAATATTCTATGGCAGGGGCTC 59.991 47.826 0.00 0.00 40.87 4.70
598 599 1.362224 TATTCTATGGCAGGGGCTCC 58.638 55.000 0.00 0.00 40.87 4.70
599 600 1.430369 ATTCTATGGCAGGGGCTCCC 61.430 60.000 0.00 0.00 45.90 4.30
635 636 1.287425 GTTCGTCTATTCGGCCTTGG 58.713 55.000 0.00 0.00 0.00 3.61
697 698 1.081892 GTGTACTCGCACTCGTCCTA 58.918 55.000 0.00 0.00 36.51 2.94
1247 1248 0.525029 GGTAGCTTACGTCGACTGGC 60.525 60.000 14.70 11.68 0.00 4.85
1258 1259 2.749441 GACTGGCCTGGCTGCTTC 60.749 66.667 19.68 6.51 0.00 3.86
1270 1271 1.916697 GCTGCTTCTTGCTCCGGTTC 61.917 60.000 0.00 0.00 43.37 3.62
1370 1371 1.648467 GCCGGATTCCTGTGTTCTGC 61.648 60.000 5.05 0.00 0.00 4.26
1379 1380 1.609061 CCTGTGTTCTGCTAGGTGGTG 60.609 57.143 0.00 0.00 0.00 4.17
1380 1381 1.070758 CTGTGTTCTGCTAGGTGGTGT 59.929 52.381 0.00 0.00 0.00 4.16
1381 1382 1.202639 TGTGTTCTGCTAGGTGGTGTG 60.203 52.381 0.00 0.00 0.00 3.82
1382 1383 1.128200 TGTTCTGCTAGGTGGTGTGT 58.872 50.000 0.00 0.00 0.00 3.72
1383 1384 1.488812 TGTTCTGCTAGGTGGTGTGTT 59.511 47.619 0.00 0.00 0.00 3.32
1384 1385 1.873591 GTTCTGCTAGGTGGTGTGTTG 59.126 52.381 0.00 0.00 0.00 3.33
1385 1386 1.128200 TCTGCTAGGTGGTGTGTTGT 58.872 50.000 0.00 0.00 0.00 3.32
1386 1387 1.202639 TCTGCTAGGTGGTGTGTTGTG 60.203 52.381 0.00 0.00 0.00 3.33
1387 1388 0.817634 TGCTAGGTGGTGTGTTGTGC 60.818 55.000 0.00 0.00 0.00 4.57
1388 1389 0.535102 GCTAGGTGGTGTGTTGTGCT 60.535 55.000 0.00 0.00 0.00 4.40
1389 1390 1.967319 CTAGGTGGTGTGTTGTGCTT 58.033 50.000 0.00 0.00 0.00 3.91
1390 1391 1.873591 CTAGGTGGTGTGTTGTGCTTC 59.126 52.381 0.00 0.00 0.00 3.86
1391 1392 1.095228 AGGTGGTGTGTTGTGCTTCG 61.095 55.000 0.00 0.00 0.00 3.79
1392 1393 1.373590 GGTGGTGTGTTGTGCTTCGT 61.374 55.000 0.00 0.00 0.00 3.85
1393 1394 0.248054 GTGGTGTGTTGTGCTTCGTG 60.248 55.000 0.00 0.00 0.00 4.35
1394 1395 0.675208 TGGTGTGTTGTGCTTCGTGT 60.675 50.000 0.00 0.00 0.00 4.49
1395 1396 1.292061 GGTGTGTTGTGCTTCGTGTA 58.708 50.000 0.00 0.00 0.00 2.90
1396 1397 1.871039 GGTGTGTTGTGCTTCGTGTAT 59.129 47.619 0.00 0.00 0.00 2.29
1397 1398 2.289547 GGTGTGTTGTGCTTCGTGTATT 59.710 45.455 0.00 0.00 0.00 1.89
1398 1399 3.242936 GGTGTGTTGTGCTTCGTGTATTT 60.243 43.478 0.00 0.00 0.00 1.40
1399 1400 4.347813 GTGTGTTGTGCTTCGTGTATTTT 58.652 39.130 0.00 0.00 0.00 1.82
1400 1401 4.436523 GTGTGTTGTGCTTCGTGTATTTTC 59.563 41.667 0.00 0.00 0.00 2.29
1401 1402 3.657625 GTGTTGTGCTTCGTGTATTTTCG 59.342 43.478 0.00 0.00 0.00 3.46
1402 1403 3.556365 TGTTGTGCTTCGTGTATTTTCGA 59.444 39.130 0.00 0.00 0.00 3.71
1403 1404 3.781341 TGTGCTTCGTGTATTTTCGAC 57.219 42.857 0.00 0.00 35.82 4.20
1404 1405 2.154198 TGTGCTTCGTGTATTTTCGACG 59.846 45.455 0.00 0.00 35.82 5.12
1414 1429 5.557405 CGTGTATTTTCGACGGTTTTACTTG 59.443 40.000 0.00 0.00 0.00 3.16
1523 1690 2.641305 GCTGATTGCATCTCCAGAGTT 58.359 47.619 8.66 0.00 42.31 3.01
1527 1694 4.965814 TGATTGCATCTCCAGAGTTATCC 58.034 43.478 0.00 0.00 0.00 2.59
1530 1697 2.103771 TGCATCTCCAGAGTTATCCAGC 59.896 50.000 0.00 0.00 0.00 4.85
1582 1749 5.722021 ATTGGGTTGATAAACAGTTGGTC 57.278 39.130 0.00 0.00 0.00 4.02
1647 1822 2.103094 GGATGTAGTCATGTAGGCAGCA 59.897 50.000 0.00 0.00 34.06 4.41
1719 1894 5.344743 TCATACTTTTGGTTTGGTTTGCA 57.655 34.783 0.00 0.00 0.00 4.08
1726 1901 3.902881 TGGTTTGGTTTGCAAATCTGT 57.097 38.095 22.40 0.00 0.00 3.41
1776 1951 4.006319 AGTTGACTAAAGGAATGCTCAGC 58.994 43.478 0.00 0.00 0.00 4.26
1809 1984 9.421806 GGAGATATCATATCACTATGCTAATGC 57.578 37.037 7.43 0.00 35.64 3.56
1819 1994 5.353956 TCACTATGCTAATGCGTTTCAACAT 59.646 36.000 0.00 0.00 43.34 2.71
1872 2048 7.382898 TGCTGATTATACGCAAACAGGATATA 58.617 34.615 0.00 0.00 0.00 0.86
1877 2053 7.806149 TTATACGCAAACAGGATATATCGTG 57.194 36.000 26.31 26.31 45.40 4.35
1881 2057 4.272504 CGCAAACAGGATATATCGTGGTTT 59.727 41.667 27.85 22.86 46.75 3.27
1884 2060 6.715464 CAAACAGGATATATCGTGGTTTGAC 58.285 40.000 30.21 11.67 46.75 3.18
1896 2072 6.335471 TCGTGGTTTGACTCAATACTCTTA 57.665 37.500 0.00 0.00 0.00 2.10
1897 2073 6.931838 TCGTGGTTTGACTCAATACTCTTAT 58.068 36.000 0.00 0.00 0.00 1.73
1900 2076 9.146984 CGTGGTTTGACTCAATACTCTTATTTA 57.853 33.333 0.00 0.00 0.00 1.40
1906 2082 8.718102 TGACTCAATACTCTTATTTACTTGGC 57.282 34.615 0.00 0.00 0.00 4.52
1907 2083 8.318412 TGACTCAATACTCTTATTTACTTGGCA 58.682 33.333 0.00 0.00 0.00 4.92
1910 2133 9.113838 CTCAATACTCTTATTTACTTGGCACAT 57.886 33.333 0.00 0.00 39.30 3.21
1945 2168 4.141846 ACCTGGCACATATGTAGTCTTCTG 60.142 45.833 8.32 0.00 38.20 3.02
2064 2296 6.473758 GTCAATAGTAGTTCTTCCCTGGTTT 58.526 40.000 0.00 0.00 0.00 3.27
2334 4522 9.739276 TGTATCTCACTAATGAAAGACCAAATT 57.261 29.630 0.00 0.00 33.30 1.82
2378 4566 5.722263 CTTGACTGATCAGTGATCACTTCT 58.278 41.667 32.50 15.47 43.11 2.85
2384 4572 6.873076 ACTGATCAGTGATCACTTCTTTTCTC 59.127 38.462 28.18 13.77 43.11 2.87
2385 4573 6.762333 TGATCAGTGATCACTTCTTTTCTCA 58.238 36.000 28.18 15.84 43.11 3.27
2386 4574 6.872547 TGATCAGTGATCACTTCTTTTCTCAG 59.127 38.462 28.18 10.54 43.11 3.35
2387 4575 4.993584 TCAGTGATCACTTCTTTTCTCAGC 59.006 41.667 25.84 0.00 40.20 4.26
2388 4576 4.753610 CAGTGATCACTTCTTTTCTCAGCA 59.246 41.667 25.84 0.00 40.20 4.41
2389 4577 5.411977 CAGTGATCACTTCTTTTCTCAGCAT 59.588 40.000 25.84 0.00 40.20 3.79
2390 4578 5.411977 AGTGATCACTTCTTTTCTCAGCATG 59.588 40.000 22.89 0.00 38.83 4.06
2391 4579 4.155462 TGATCACTTCTTTTCTCAGCATGC 59.845 41.667 10.51 10.51 34.76 4.06
2485 4688 7.554476 TGCTGCCAACATTGTACTATTATTGTA 59.446 33.333 0.00 0.00 0.00 2.41
2528 4731 5.128919 GCCAACATGAGATAGGATGTTCTT 58.871 41.667 0.00 0.00 40.12 2.52
2534 4737 6.596888 ACATGAGATAGGATGTTCTTGTTGTG 59.403 38.462 0.00 0.00 27.94 3.33
2579 4782 2.875087 TGCTTCATATGCATTGTGCC 57.125 45.000 3.54 0.00 44.23 5.01
2586 4789 7.092079 GCTTCATATGCATTGTGCCATAATAA 58.908 34.615 3.54 0.00 44.23 1.40
2621 4824 5.181748 AGTGCATGGAGAACTGAAATCTAC 58.818 41.667 0.00 0.00 0.00 2.59
2629 4832 2.969628 ACTGAAATCTACAGGCGGAG 57.030 50.000 0.00 0.00 39.38 4.63
2676 4880 6.986817 CAGAACAGGGAATATTGTAGTACAGG 59.013 42.308 2.68 0.00 0.00 4.00
2720 4926 4.776837 AGAGTAGGATTCTAGATGCATGGG 59.223 45.833 2.46 0.00 0.00 4.00
2747 4953 6.485648 TGCGAGTCTGCTCTATGTAGTTATAA 59.514 38.462 8.13 0.00 39.53 0.98
2748 4954 7.012989 TGCGAGTCTGCTCTATGTAGTTATAAA 59.987 37.037 8.13 0.00 39.53 1.40
2804 5015 0.881796 GTTAGGTTTGGAGGTGCTGC 59.118 55.000 0.00 0.00 0.00 5.25
2868 5079 7.345392 ACTGATGAAAGGCCAAAATACCAATAT 59.655 33.333 5.01 0.00 0.00 1.28
2885 5096 6.901265 ACCAATATTGCATTTTGTTTGCTTC 58.099 32.000 10.11 0.00 40.77 3.86
2892 5103 4.508492 TGCATTTTGTTTGCTTCAGTGATG 59.492 37.500 0.00 0.00 40.77 3.07
2893 5104 4.084223 GCATTTTGTTTGCTTCAGTGATGG 60.084 41.667 8.02 0.00 37.14 3.51
2896 5107 2.665165 TGTTTGCTTCAGTGATGGGTT 58.335 42.857 8.02 0.00 0.00 4.11
2915 5126 5.066375 TGGGTTATCATTTCATTTCTCAGCG 59.934 40.000 0.00 0.00 0.00 5.18
2923 5134 3.251479 TCATTTCTCAGCGTGCTGTAT 57.749 42.857 20.33 8.29 43.96 2.29
3003 5215 5.648178 TCAGTTTACGAGCCTATTGTACA 57.352 39.130 0.00 0.00 0.00 2.90
3073 6271 3.774216 AGATTCTAGGATATGAGCAGGCC 59.226 47.826 0.00 0.00 0.00 5.19
3273 6474 3.995199 TGCTTGTAGACCTCAAAGACAG 58.005 45.455 0.00 0.00 0.00 3.51
3416 6617 0.603975 GCTTGAAAGTGAGGCGGACT 60.604 55.000 0.00 0.00 0.00 3.85
3428 6629 0.749649 GGCGGACTGAGATGATGACT 59.250 55.000 0.00 0.00 0.00 3.41
3452 6653 3.366396 AGTCACGTTCTACATGATCCCT 58.634 45.455 0.00 0.00 0.00 4.20
3635 6836 1.303317 GGCCAAGGACACGATGGTT 60.303 57.895 0.00 0.00 36.57 3.67
3699 6900 2.438434 GATGCCACCAGGAACCCG 60.438 66.667 0.00 0.00 36.89 5.28
3723 6924 5.864474 GCCTATCTGTACACTGGAATAATCG 59.136 44.000 0.00 0.00 0.00 3.34
3726 6927 5.907866 TCTGTACACTGGAATAATCGTCA 57.092 39.130 0.00 0.00 0.00 4.35
3747 6948 1.584495 GTGGACAAAATGCCCGACC 59.416 57.895 0.00 0.00 0.00 4.79
3773 6974 3.860536 GGTTCTTCTTCTGTCTCGCATAC 59.139 47.826 0.00 0.00 0.00 2.39
3793 6994 2.094234 ACCAAGTTGCTGCGTTTTTCTT 60.094 40.909 0.00 0.00 0.00 2.52
3808 7009 9.974980 TGCGTTTTTCTTTTTCCTCTTATTATT 57.025 25.926 0.00 0.00 0.00 1.40
4006 7222 5.356751 TGCAATTGTTTCTCTGTGTTGTAGT 59.643 36.000 7.40 0.00 0.00 2.73
4036 7252 3.149196 GTCTGTTTGGAGCATGAAAGGA 58.851 45.455 0.00 0.00 0.00 3.36
4066 7282 3.341823 CTTTGTAACTCTGCCATCAGCT 58.658 45.455 0.00 0.00 44.23 4.24
4079 7295 3.668447 CCATCAGCTGGTACCATACATC 58.332 50.000 16.75 2.76 40.49 3.06
4085 7301 7.136822 TCAGCTGGTACCATACATCTAAATT 57.863 36.000 16.75 0.00 0.00 1.82
4096 7312 7.775561 ACCATACATCTAAATTTTCCAGGTCTC 59.224 37.037 0.00 0.00 0.00 3.36
4107 7323 3.095912 TCCAGGTCTCTGATTCCGTTA 57.904 47.619 0.00 0.00 43.49 3.18
4112 7328 3.769844 AGGTCTCTGATTCCGTTACATGT 59.230 43.478 2.69 2.69 0.00 3.21
4113 7329 3.865745 GGTCTCTGATTCCGTTACATGTG 59.134 47.826 9.11 0.00 0.00 3.21
4138 7354 4.500545 GCGAGATGATTGACAGACACCTAT 60.501 45.833 0.00 0.00 0.00 2.57
4158 7374 5.186603 CCTATTGACCAGCAGCTGATAGATA 59.813 44.000 24.90 14.21 32.44 1.98
4160 7376 5.557576 TTGACCAGCAGCTGATAGATAAT 57.442 39.130 24.90 0.00 32.44 1.28
4172 7388 6.210385 AGCTGATAGATAATAGTGGTGTCTGG 59.790 42.308 0.00 0.00 0.00 3.86
4177 7393 4.651503 AGATAATAGTGGTGTCTGGTGAGG 59.348 45.833 0.00 0.00 0.00 3.86
4261 7477 4.764896 CAGCATATGCAGCGGAGA 57.235 55.556 28.62 0.00 45.16 3.71
4262 7478 2.996444 CAGCATATGCAGCGGAGAA 58.004 52.632 28.62 0.00 45.16 2.87
4263 7479 1.520494 CAGCATATGCAGCGGAGAAT 58.480 50.000 28.62 2.35 45.16 2.40
4264 7480 2.691927 CAGCATATGCAGCGGAGAATA 58.308 47.619 28.62 0.00 45.16 1.75
4265 7481 3.069289 CAGCATATGCAGCGGAGAATAA 58.931 45.455 28.62 0.00 45.16 1.40
4266 7482 3.499537 CAGCATATGCAGCGGAGAATAAA 59.500 43.478 28.62 0.00 45.16 1.40
4267 7483 3.750130 AGCATATGCAGCGGAGAATAAAG 59.250 43.478 28.62 0.00 45.16 1.85
4268 7484 3.669023 GCATATGCAGCGGAGAATAAAGC 60.669 47.826 22.84 0.00 41.59 3.51
4269 7485 1.312815 ATGCAGCGGAGAATAAAGCC 58.687 50.000 0.00 0.00 0.00 4.35
4270 7486 0.253044 TGCAGCGGAGAATAAAGCCT 59.747 50.000 0.00 0.00 0.00 4.58
4271 7487 0.659957 GCAGCGGAGAATAAAGCCTG 59.340 55.000 0.00 0.00 0.00 4.85
4272 7488 2.014068 GCAGCGGAGAATAAAGCCTGT 61.014 52.381 0.00 0.00 0.00 4.00
4273 7489 2.359900 CAGCGGAGAATAAAGCCTGTT 58.640 47.619 0.00 0.00 0.00 3.16
4274 7490 2.749621 CAGCGGAGAATAAAGCCTGTTT 59.250 45.455 0.00 0.00 0.00 2.83
4275 7491 3.010420 AGCGGAGAATAAAGCCTGTTTC 58.990 45.455 0.00 0.00 0.00 2.78
4276 7492 2.223044 GCGGAGAATAAAGCCTGTTTCG 60.223 50.000 0.00 0.00 0.00 3.46
4277 7493 3.259064 CGGAGAATAAAGCCTGTTTCGA 58.741 45.455 0.00 0.00 0.00 3.71
4278 7494 3.307242 CGGAGAATAAAGCCTGTTTCGAG 59.693 47.826 0.00 0.00 0.00 4.04
4279 7495 4.504858 GGAGAATAAAGCCTGTTTCGAGA 58.495 43.478 0.00 0.00 0.00 4.04
4280 7496 4.568760 GGAGAATAAAGCCTGTTTCGAGAG 59.431 45.833 0.00 0.00 0.00 3.20
4296 7512 2.605823 CGAGAGAACACGAAGAAGCAGT 60.606 50.000 0.00 0.00 32.29 4.40
4308 7524 3.004752 AGAAGCAGTGTGTTTCTTGGT 57.995 42.857 0.62 0.00 43.84 3.67
4358 7574 1.302192 GCCACCGCCAGACTTGTAA 60.302 57.895 0.00 0.00 0.00 2.41
4363 7579 3.331150 CACCGCCAGACTTGTAAATGTA 58.669 45.455 0.00 0.00 0.00 2.29
4367 7583 4.142902 CCGCCAGACTTGTAAATGTACTTG 60.143 45.833 0.00 0.00 0.00 3.16
4374 7590 6.012658 ACTTGTAAATGTACTTGTGCATGG 57.987 37.500 5.19 0.00 0.00 3.66
4381 7597 2.289631 TGTACTTGTGCATGGTCCTCAG 60.290 50.000 0.00 0.00 0.00 3.35
4418 7634 5.483937 TCACATTCTGCTTCCCTACTTTCTA 59.516 40.000 0.00 0.00 0.00 2.10
4486 7709 8.625467 AATCCTTACTACTCCCTTTAGTGATT 57.375 34.615 0.00 0.00 31.99 2.57
4532 7755 8.749026 TTTACAAAGGGAGTACATGTGTAAAA 57.251 30.769 12.17 0.00 37.15 1.52
4534 7757 7.272037 ACAAAGGGAGTACATGTGTAAAAAG 57.728 36.000 9.11 0.00 31.52 2.27
4542 7765 7.190920 AGTACATGTGTAAAAAGACTCAAGC 57.809 36.000 9.11 0.00 31.52 4.01
4554 7777 1.615883 GACTCAAGCTGACAGTCTCCA 59.384 52.381 3.99 0.00 0.00 3.86
4562 7785 1.476085 CTGACAGTCTCCAGCTAGGTG 59.524 57.143 15.13 15.13 39.02 4.00
4564 7787 0.542938 ACAGTCTCCAGCTAGGTGCA 60.543 55.000 16.62 0.00 45.94 4.57
4572 7795 4.281941 TCTCCAGCTAGGTGCATAATGTAG 59.718 45.833 16.62 0.00 45.94 2.74
4573 7796 4.223144 TCCAGCTAGGTGCATAATGTAGA 58.777 43.478 16.62 2.25 45.94 2.59
4574 7797 4.840680 TCCAGCTAGGTGCATAATGTAGAT 59.159 41.667 16.62 0.00 45.94 1.98
4575 7798 5.307976 TCCAGCTAGGTGCATAATGTAGATT 59.692 40.000 16.62 0.00 45.94 2.40
4576 7799 6.496911 TCCAGCTAGGTGCATAATGTAGATTA 59.503 38.462 16.62 0.00 45.94 1.75
4577 7800 7.180946 TCCAGCTAGGTGCATAATGTAGATTAT 59.819 37.037 16.62 0.00 45.94 1.28
4578 7801 8.478066 CCAGCTAGGTGCATAATGTAGATTATA 58.522 37.037 16.62 0.00 45.94 0.98
4594 7817 9.742144 TGTAGATTATATAGTCTCCAACTCTCC 57.258 37.037 10.76 0.00 39.55 3.71
4595 7818 9.742144 GTAGATTATATAGTCTCCAACTCTCCA 57.258 37.037 10.76 0.00 39.55 3.86
4597 7820 9.253832 AGATTATATAGTCTCCAACTCTCCATG 57.746 37.037 2.04 0.00 39.55 3.66
4598 7821 7.782897 TTATATAGTCTCCAACTCTCCATGG 57.217 40.000 4.97 4.97 39.55 3.66
4599 7822 2.334006 AGTCTCCAACTCTCCATGGT 57.666 50.000 12.58 0.00 37.94 3.55
4600 7823 3.474798 AGTCTCCAACTCTCCATGGTA 57.525 47.619 12.58 0.07 37.94 3.25
4601 7824 3.791320 AGTCTCCAACTCTCCATGGTAA 58.209 45.455 12.58 0.00 37.94 2.85
4602 7825 3.772025 AGTCTCCAACTCTCCATGGTAAG 59.228 47.826 12.58 12.65 37.94 2.34
4603 7826 3.769844 GTCTCCAACTCTCCATGGTAAGA 59.230 47.826 12.58 7.33 37.94 2.10
4604 7827 4.026744 TCTCCAACTCTCCATGGTAAGAG 58.973 47.826 22.88 22.88 43.78 2.85
4610 7833 4.543590 CTCTCCATGGTAAGAGTTGTGT 57.456 45.455 18.34 0.00 35.37 3.72
4611 7834 4.499183 CTCTCCATGGTAAGAGTTGTGTC 58.501 47.826 18.34 0.00 35.37 3.67
4612 7835 3.260884 TCTCCATGGTAAGAGTTGTGTCC 59.739 47.826 12.58 0.00 0.00 4.02
4613 7836 2.304761 TCCATGGTAAGAGTTGTGTCCC 59.695 50.000 12.58 0.00 0.00 4.46
4614 7837 2.305927 CCATGGTAAGAGTTGTGTCCCT 59.694 50.000 2.57 0.00 0.00 4.20
4615 7838 3.244911 CCATGGTAAGAGTTGTGTCCCTT 60.245 47.826 2.57 0.00 0.00 3.95
4616 7839 4.398319 CATGGTAAGAGTTGTGTCCCTTT 58.602 43.478 0.00 0.00 0.00 3.11
4617 7840 4.081322 TGGTAAGAGTTGTGTCCCTTTC 57.919 45.455 0.00 0.00 0.00 2.62
4618 7841 3.456644 TGGTAAGAGTTGTGTCCCTTTCA 59.543 43.478 0.00 0.00 0.00 2.69
4619 7842 4.080243 TGGTAAGAGTTGTGTCCCTTTCAA 60.080 41.667 0.00 0.00 0.00 2.69
4620 7843 5.070685 GGTAAGAGTTGTGTCCCTTTCAAT 58.929 41.667 0.00 0.00 0.00 2.57
4621 7844 5.535030 GGTAAGAGTTGTGTCCCTTTCAATT 59.465 40.000 0.00 0.00 0.00 2.32
4622 7845 6.040504 GGTAAGAGTTGTGTCCCTTTCAATTT 59.959 38.462 0.00 0.00 0.00 1.82
4623 7846 7.229907 GGTAAGAGTTGTGTCCCTTTCAATTTA 59.770 37.037 0.00 0.00 0.00 1.40
4624 7847 6.884280 AGAGTTGTGTCCCTTTCAATTTAG 57.116 37.500 0.00 0.00 0.00 1.85
4625 7848 5.770162 AGAGTTGTGTCCCTTTCAATTTAGG 59.230 40.000 0.00 0.00 0.00 2.69
4626 7849 5.701224 AGTTGTGTCCCTTTCAATTTAGGA 58.299 37.500 0.00 0.00 33.13 2.94
4627 7850 5.770162 AGTTGTGTCCCTTTCAATTTAGGAG 59.230 40.000 0.00 0.00 33.13 3.69
4628 7851 4.662278 TGTGTCCCTTTCAATTTAGGAGG 58.338 43.478 0.00 0.00 33.13 4.30
4629 7852 4.105697 TGTGTCCCTTTCAATTTAGGAGGT 59.894 41.667 0.00 0.00 33.13 3.85
4630 7853 4.700692 GTGTCCCTTTCAATTTAGGAGGTC 59.299 45.833 0.00 0.00 33.13 3.85
4631 7854 4.601857 TGTCCCTTTCAATTTAGGAGGTCT 59.398 41.667 0.00 0.00 33.13 3.85
4632 7855 4.944317 GTCCCTTTCAATTTAGGAGGTCTG 59.056 45.833 0.00 0.00 33.13 3.51
4633 7856 3.696548 CCCTTTCAATTTAGGAGGTCTGC 59.303 47.826 0.00 0.00 33.13 4.26
4634 7857 4.568592 CCCTTTCAATTTAGGAGGTCTGCT 60.569 45.833 0.00 0.00 33.13 4.24
4635 7858 4.397417 CCTTTCAATTTAGGAGGTCTGCTG 59.603 45.833 2.18 0.00 33.13 4.41
4636 7859 4.908601 TTCAATTTAGGAGGTCTGCTGA 57.091 40.909 2.18 0.00 32.14 4.26
4637 7860 5.441718 TTCAATTTAGGAGGTCTGCTGAT 57.558 39.130 2.18 0.00 32.14 2.90
4638 7861 5.028549 TCAATTTAGGAGGTCTGCTGATC 57.971 43.478 2.18 0.00 32.14 2.92
4639 7862 4.471025 TCAATTTAGGAGGTCTGCTGATCA 59.529 41.667 6.63 0.00 32.14 2.92
4640 7863 4.686191 ATTTAGGAGGTCTGCTGATCAG 57.314 45.455 18.84 18.84 44.21 2.90
4641 7864 2.836636 TAGGAGGTCTGCTGATCAGT 57.163 50.000 23.38 2.60 43.32 3.41
4642 7865 1.484038 AGGAGGTCTGCTGATCAGTC 58.516 55.000 23.38 15.78 43.32 3.51
4643 7866 1.189752 GGAGGTCTGCTGATCAGTCA 58.810 55.000 23.38 19.10 43.32 3.41
4644 7867 1.552337 GGAGGTCTGCTGATCAGTCAA 59.448 52.381 23.38 9.29 43.32 3.18
4645 7868 2.170187 GGAGGTCTGCTGATCAGTCAAT 59.830 50.000 23.38 5.87 43.32 2.57
4646 7869 3.370315 GGAGGTCTGCTGATCAGTCAATT 60.370 47.826 23.38 6.09 43.32 2.32
4647 7870 4.141846 GGAGGTCTGCTGATCAGTCAATTA 60.142 45.833 23.38 8.07 43.32 1.40
4648 7871 5.454471 GGAGGTCTGCTGATCAGTCAATTAT 60.454 44.000 23.38 5.45 43.32 1.28
4649 7872 5.999044 AGGTCTGCTGATCAGTCAATTATT 58.001 37.500 23.38 1.37 43.32 1.40
4650 7873 6.054295 AGGTCTGCTGATCAGTCAATTATTC 58.946 40.000 23.38 4.56 43.32 1.75
4651 7874 5.050499 GGTCTGCTGATCAGTCAATTATTCG 60.050 44.000 23.38 8.68 43.32 3.34
4652 7875 4.509230 TCTGCTGATCAGTCAATTATTCGC 59.491 41.667 23.38 6.41 43.32 4.70
4653 7876 4.190772 TGCTGATCAGTCAATTATTCGCA 58.809 39.130 23.38 8.99 33.05 5.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.746245 CACAATTGTGCCTCGTAAAAAGAAA 59.254 36.000 24.69 0.00 39.39 2.52
1 2 5.277825 CACAATTGTGCCTCGTAAAAAGAA 58.722 37.500 24.69 0.00 39.39 2.52
2 3 4.854399 CACAATTGTGCCTCGTAAAAAGA 58.146 39.130 24.69 0.00 39.39 2.52
16 17 3.058224 GCTTTTACGAGAGGCACAATTGT 60.058 43.478 4.92 4.92 0.00 2.71
17 18 3.058293 TGCTTTTACGAGAGGCACAATTG 60.058 43.478 3.24 3.24 0.00 2.32
18 19 3.146066 TGCTTTTACGAGAGGCACAATT 58.854 40.909 0.00 0.00 0.00 2.32
19 20 2.778299 TGCTTTTACGAGAGGCACAAT 58.222 42.857 0.00 0.00 0.00 2.71
20 21 2.248280 TGCTTTTACGAGAGGCACAA 57.752 45.000 0.00 0.00 0.00 3.33
21 22 2.248280 TTGCTTTTACGAGAGGCACA 57.752 45.000 0.00 0.00 32.47 4.57
22 23 3.831715 ATTTGCTTTTACGAGAGGCAC 57.168 42.857 0.00 0.00 32.47 5.01
23 24 4.941263 ACATATTTGCTTTTACGAGAGGCA 59.059 37.500 0.00 0.00 0.00 4.75
24 25 5.266242 CACATATTTGCTTTTACGAGAGGC 58.734 41.667 0.00 0.00 0.00 4.70
25 26 5.266242 GCACATATTTGCTTTTACGAGAGG 58.734 41.667 6.60 0.00 39.59 3.69
26 27 5.065218 AGGCACATATTTGCTTTTACGAGAG 59.935 40.000 13.29 0.00 42.56 3.20
27 28 4.941263 AGGCACATATTTGCTTTTACGAGA 59.059 37.500 13.29 0.00 42.56 4.04
28 29 5.235305 AGGCACATATTTGCTTTTACGAG 57.765 39.130 13.29 0.00 42.56 4.18
29 30 4.095782 GGAGGCACATATTTGCTTTTACGA 59.904 41.667 13.29 0.00 42.56 3.43
30 31 4.142491 TGGAGGCACATATTTGCTTTTACG 60.142 41.667 13.29 0.00 42.56 3.18
31 32 5.323371 TGGAGGCACATATTTGCTTTTAC 57.677 39.130 13.29 2.15 42.56 2.01
32 33 4.402155 CCTGGAGGCACATATTTGCTTTTA 59.598 41.667 13.29 0.00 42.56 1.52
33 34 3.196254 CCTGGAGGCACATATTTGCTTTT 59.804 43.478 13.29 0.52 42.56 2.27
34 35 2.762327 CCTGGAGGCACATATTTGCTTT 59.238 45.455 13.29 2.87 42.56 3.51
35 36 2.381911 CCTGGAGGCACATATTTGCTT 58.618 47.619 13.29 5.98 42.56 3.91
36 37 2.062971 CCTGGAGGCACATATTTGCT 57.937 50.000 13.29 0.24 42.56 3.91
48 49 2.009774 CACATTTACTTCGCCTGGAGG 58.990 52.381 0.00 0.00 38.53 4.30
49 50 2.673368 GACACATTTACTTCGCCTGGAG 59.327 50.000 0.00 0.00 0.00 3.86
50 51 2.614481 GGACACATTTACTTCGCCTGGA 60.614 50.000 0.00 0.00 0.00 3.86
51 52 1.737793 GGACACATTTACTTCGCCTGG 59.262 52.381 0.00 0.00 0.00 4.45
52 53 1.737793 GGGACACATTTACTTCGCCTG 59.262 52.381 0.00 0.00 0.00 4.85
53 54 1.628846 AGGGACACATTTACTTCGCCT 59.371 47.619 0.00 0.00 0.00 5.52
54 55 2.007608 GAGGGACACATTTACTTCGCC 58.992 52.381 0.00 0.00 0.00 5.54
55 56 2.973945 AGAGGGACACATTTACTTCGC 58.026 47.619 0.00 0.00 0.00 4.70
56 57 4.113354 GCTAGAGGGACACATTTACTTCG 58.887 47.826 0.00 0.00 0.00 3.79
57 58 4.113354 CGCTAGAGGGACACATTTACTTC 58.887 47.826 0.00 0.00 0.00 3.01
58 59 3.767673 TCGCTAGAGGGACACATTTACTT 59.232 43.478 0.00 0.00 31.73 2.24
59 60 3.362706 TCGCTAGAGGGACACATTTACT 58.637 45.455 0.00 0.00 31.73 2.24
60 61 3.795623 TCGCTAGAGGGACACATTTAC 57.204 47.619 0.00 0.00 31.73 2.01
61 62 4.464951 TCTTTCGCTAGAGGGACACATTTA 59.535 41.667 0.00 0.00 36.70 1.40
62 63 3.260884 TCTTTCGCTAGAGGGACACATTT 59.739 43.478 0.00 0.00 36.70 2.32
63 64 2.832129 TCTTTCGCTAGAGGGACACATT 59.168 45.455 0.00 0.00 36.70 2.71
64 65 2.457598 TCTTTCGCTAGAGGGACACAT 58.542 47.619 0.00 0.00 36.70 3.21
65 66 1.919240 TCTTTCGCTAGAGGGACACA 58.081 50.000 0.00 0.00 36.70 3.72
66 67 3.314541 TTTCTTTCGCTAGAGGGACAC 57.685 47.619 0.00 0.00 36.70 3.67
67 68 4.345859 TTTTTCTTTCGCTAGAGGGACA 57.654 40.909 0.00 0.00 36.70 4.02
86 87 3.055747 TGAAAAGGGGAAAGCACGTTTTT 60.056 39.130 0.00 0.00 43.33 1.94
87 88 2.498078 TGAAAAGGGGAAAGCACGTTTT 59.502 40.909 0.00 0.00 45.24 2.43
88 89 2.104170 TGAAAAGGGGAAAGCACGTTT 58.896 42.857 0.00 0.00 37.12 3.60
89 90 1.770294 TGAAAAGGGGAAAGCACGTT 58.230 45.000 0.00 0.00 0.00 3.99
90 91 1.681264 CTTGAAAAGGGGAAAGCACGT 59.319 47.619 0.00 0.00 41.27 4.49
91 92 2.422276 CTTGAAAAGGGGAAAGCACG 57.578 50.000 0.00 0.00 41.27 5.34
102 103 2.977772 TTGTTGTGCCCCTTGAAAAG 57.022 45.000 0.00 0.00 45.69 2.27
103 104 2.744494 GCATTGTTGTGCCCCTTGAAAA 60.744 45.455 0.00 0.00 39.18 2.29
104 105 1.202627 GCATTGTTGTGCCCCTTGAAA 60.203 47.619 0.00 0.00 39.18 2.69
105 106 0.392336 GCATTGTTGTGCCCCTTGAA 59.608 50.000 0.00 0.00 39.18 2.69
106 107 2.048601 GCATTGTTGTGCCCCTTGA 58.951 52.632 0.00 0.00 39.18 3.02
107 108 4.679412 GCATTGTTGTGCCCCTTG 57.321 55.556 0.00 0.00 39.18 3.61
113 114 0.232816 CGCAAAAGGCATTGTTGTGC 59.767 50.000 5.18 3.88 45.17 4.57
114 115 0.860533 CCGCAAAAGGCATTGTTGTG 59.139 50.000 10.51 10.51 45.17 3.33
115 116 0.749649 TCCGCAAAAGGCATTGTTGT 59.250 45.000 5.18 0.00 45.17 3.32
116 117 1.794116 CTTCCGCAAAAGGCATTGTTG 59.206 47.619 5.18 0.00 45.17 3.33
117 118 1.412343 ACTTCCGCAAAAGGCATTGTT 59.588 42.857 5.18 0.00 45.17 2.83
118 119 1.039856 ACTTCCGCAAAAGGCATTGT 58.960 45.000 5.18 0.00 45.17 2.71
119 120 3.296322 TTACTTCCGCAAAAGGCATTG 57.704 42.857 0.00 0.00 45.17 2.82
120 121 3.068873 TGTTTACTTCCGCAAAAGGCATT 59.931 39.130 0.70 0.00 45.17 3.56
121 122 2.625790 TGTTTACTTCCGCAAAAGGCAT 59.374 40.909 0.70 0.00 45.17 4.40
122 123 2.025155 TGTTTACTTCCGCAAAAGGCA 58.975 42.857 0.70 0.00 45.17 4.75
123 124 2.785713 TGTTTACTTCCGCAAAAGGC 57.214 45.000 0.70 0.00 39.90 4.35
124 125 3.980775 CACATGTTTACTTCCGCAAAAGG 59.019 43.478 0.00 0.00 0.00 3.11
125 126 3.425193 GCACATGTTTACTTCCGCAAAAG 59.575 43.478 0.00 0.00 0.00 2.27
126 127 3.376540 GCACATGTTTACTTCCGCAAAA 58.623 40.909 0.00 0.00 0.00 2.44
127 128 2.287909 GGCACATGTTTACTTCCGCAAA 60.288 45.455 0.00 0.00 0.00 3.68
128 129 1.268352 GGCACATGTTTACTTCCGCAA 59.732 47.619 0.00 0.00 0.00 4.85
129 130 0.878416 GGCACATGTTTACTTCCGCA 59.122 50.000 0.00 0.00 0.00 5.69
130 131 1.130561 GAGGCACATGTTTACTTCCGC 59.869 52.381 0.00 0.00 0.00 5.54
131 132 1.737793 GGAGGCACATGTTTACTTCCG 59.262 52.381 0.00 0.00 0.00 4.30
132 133 2.488153 GTGGAGGCACATGTTTACTTCC 59.512 50.000 12.23 12.23 0.00 3.46
133 134 2.159627 CGTGGAGGCACATGTTTACTTC 59.840 50.000 0.00 0.00 0.00 3.01
134 135 2.151202 CGTGGAGGCACATGTTTACTT 58.849 47.619 0.00 0.00 0.00 2.24
135 136 1.346395 TCGTGGAGGCACATGTTTACT 59.654 47.619 0.00 0.00 0.00 2.24
136 137 1.732259 CTCGTGGAGGCACATGTTTAC 59.268 52.381 0.00 0.00 0.00 2.01
137 138 1.621317 TCTCGTGGAGGCACATGTTTA 59.379 47.619 0.00 0.00 0.00 2.01
138 139 0.396435 TCTCGTGGAGGCACATGTTT 59.604 50.000 0.00 0.00 0.00 2.83
139 140 0.396435 TTCTCGTGGAGGCACATGTT 59.604 50.000 0.00 0.00 0.00 2.71
140 141 0.396435 TTTCTCGTGGAGGCACATGT 59.604 50.000 0.00 0.00 0.00 3.21
141 142 0.798776 GTTTCTCGTGGAGGCACATG 59.201 55.000 0.00 0.00 0.00 3.21
142 143 0.396435 TGTTTCTCGTGGAGGCACAT 59.604 50.000 0.00 0.00 0.00 3.21
143 144 0.179234 TTGTTTCTCGTGGAGGCACA 59.821 50.000 0.00 0.00 0.00 4.57
144 145 1.305201 TTTGTTTCTCGTGGAGGCAC 58.695 50.000 0.00 0.00 0.00 5.01
145 146 2.270352 ATTTGTTTCTCGTGGAGGCA 57.730 45.000 0.00 0.00 0.00 4.75
146 147 3.643159 AAATTTGTTTCTCGTGGAGGC 57.357 42.857 0.00 0.00 0.00 4.70
147 148 6.598064 AGGTATAAATTTGTTTCTCGTGGAGG 59.402 38.462 0.00 0.00 0.00 4.30
148 149 7.549488 AGAGGTATAAATTTGTTTCTCGTGGAG 59.451 37.037 0.00 0.00 0.00 3.86
149 150 7.391620 AGAGGTATAAATTTGTTTCTCGTGGA 58.608 34.615 0.00 0.00 0.00 4.02
150 151 7.611213 AGAGGTATAAATTTGTTTCTCGTGG 57.389 36.000 0.00 0.00 0.00 4.94
151 152 7.481798 GCAAGAGGTATAAATTTGTTTCTCGTG 59.518 37.037 18.34 18.34 34.40 4.35
152 153 7.527457 GCAAGAGGTATAAATTTGTTTCTCGT 58.473 34.615 0.00 1.23 0.00 4.18
153 154 6.682863 CGCAAGAGGTATAAATTTGTTTCTCG 59.317 38.462 0.00 0.00 43.02 4.04
154 155 7.748847 TCGCAAGAGGTATAAATTTGTTTCTC 58.251 34.615 0.00 5.24 45.01 2.87
155 156 7.681939 TCGCAAGAGGTATAAATTTGTTTCT 57.318 32.000 0.00 0.00 45.01 2.52
196 197 7.667557 TCTATCCGTGAGAAGAAAGAGAAAAA 58.332 34.615 0.00 0.00 0.00 1.94
197 198 7.228314 TCTATCCGTGAGAAGAAAGAGAAAA 57.772 36.000 0.00 0.00 0.00 2.29
198 199 6.835819 TCTATCCGTGAGAAGAAAGAGAAA 57.164 37.500 0.00 0.00 0.00 2.52
199 200 6.835819 TTCTATCCGTGAGAAGAAAGAGAA 57.164 37.500 0.00 0.00 0.00 2.87
200 201 6.659668 TCTTTCTATCCGTGAGAAGAAAGAGA 59.340 38.462 22.88 13.28 34.50 3.10
201 202 6.857956 TCTTTCTATCCGTGAGAAGAAAGAG 58.142 40.000 22.88 12.08 34.50 2.85
202 203 6.835819 TCTTTCTATCCGTGAGAAGAAAGA 57.164 37.500 22.88 22.88 34.50 2.52
203 204 6.868864 TGTTCTTTCTATCCGTGAGAAGAAAG 59.131 38.462 20.77 20.77 34.50 2.62
204 205 6.755206 TGTTCTTTCTATCCGTGAGAAGAAA 58.245 36.000 0.00 10.75 34.50 2.52
205 206 6.340962 TGTTCTTTCTATCCGTGAGAAGAA 57.659 37.500 0.00 0.00 34.50 2.52
206 207 5.977489 TGTTCTTTCTATCCGTGAGAAGA 57.023 39.130 0.00 0.00 34.50 2.87
207 208 7.038659 AGAATGTTCTTTCTATCCGTGAGAAG 58.961 38.462 0.19 0.00 34.21 2.85
208 209 6.936279 AGAATGTTCTTTCTATCCGTGAGAA 58.064 36.000 0.19 0.00 34.21 2.87
209 210 6.531503 AGAATGTTCTTTCTATCCGTGAGA 57.468 37.500 0.19 0.00 34.21 3.27
217 218 9.688592 CTGCAAGAAAAAGAATGTTCTTTCTAT 57.311 29.630 18.11 9.84 46.37 1.98
218 219 8.137437 CCTGCAAGAAAAAGAATGTTCTTTCTA 58.863 33.333 18.11 1.43 46.37 2.10
219 220 6.982724 CCTGCAAGAAAAAGAATGTTCTTTCT 59.017 34.615 18.11 11.12 46.37 2.52
220 221 6.758416 ACCTGCAAGAAAAAGAATGTTCTTTC 59.242 34.615 18.11 9.34 46.37 2.62
222 223 6.044682 CACCTGCAAGAAAAAGAATGTTCTT 58.955 36.000 2.25 2.25 43.00 2.52
223 224 5.594926 CACCTGCAAGAAAAAGAATGTTCT 58.405 37.500 0.00 0.00 35.54 3.01
224 225 4.209911 GCACCTGCAAGAAAAAGAATGTTC 59.790 41.667 0.00 0.00 41.59 3.18
225 226 4.122046 GCACCTGCAAGAAAAAGAATGTT 58.878 39.130 0.00 0.00 41.59 2.71
226 227 3.385755 AGCACCTGCAAGAAAAAGAATGT 59.614 39.130 0.00 0.00 45.16 2.71
227 228 3.986277 AGCACCTGCAAGAAAAAGAATG 58.014 40.909 0.00 0.00 45.16 2.67
228 229 4.677673 AAGCACCTGCAAGAAAAAGAAT 57.322 36.364 0.00 0.00 45.16 2.40
229 230 5.789643 ATAAGCACCTGCAAGAAAAAGAA 57.210 34.783 0.00 0.00 45.16 2.52
230 231 5.789643 AATAAGCACCTGCAAGAAAAAGA 57.210 34.783 0.00 0.00 45.16 2.52
231 232 6.849588 AAAATAAGCACCTGCAAGAAAAAG 57.150 33.333 0.00 0.00 45.16 2.27
262 263 1.646540 CGCGAGGCACACTCAAAAA 59.353 52.632 0.00 0.00 46.98 1.94
263 264 2.892334 GCGCGAGGCACACTCAAAA 61.892 57.895 12.10 0.00 46.98 2.44
264 265 3.345808 GCGCGAGGCACACTCAAA 61.346 61.111 12.10 0.00 46.98 2.69
268 269 4.961511 TTTCGCGCGAGGCACACT 62.962 61.111 32.74 0.00 43.84 3.55
269 270 4.430423 CTTTCGCGCGAGGCACAC 62.430 66.667 32.74 0.00 43.84 3.82
273 274 4.801221 CTTGCTTTCGCGCGAGGC 62.801 66.667 35.53 35.53 37.69 4.70
274 275 4.801221 GCTTGCTTTCGCGCGAGG 62.801 66.667 32.74 27.53 40.92 4.63
275 276 3.372676 ATGCTTGCTTTCGCGCGAG 62.373 57.895 32.74 23.01 42.99 5.03
276 277 3.422303 ATGCTTGCTTTCGCGCGA 61.422 55.556 31.40 31.40 39.65 5.87
277 278 3.235437 CATGCTTGCTTTCGCGCG 61.235 61.111 26.76 26.76 39.65 6.86
278 279 2.126734 ACATGCTTGCTTTCGCGC 60.127 55.556 0.00 0.00 39.65 6.86
279 280 1.061799 GACACATGCTTGCTTTCGCG 61.062 55.000 0.00 0.00 39.65 5.87
280 281 0.239347 AGACACATGCTTGCTTTCGC 59.761 50.000 0.00 0.00 0.00 4.70
281 282 2.693797 AAGACACATGCTTGCTTTCG 57.306 45.000 0.00 0.00 0.00 3.46
282 283 5.762045 TCTTAAAGACACATGCTTGCTTTC 58.238 37.500 0.00 0.00 31.85 2.62
283 284 5.532406 TCTCTTAAAGACACATGCTTGCTTT 59.468 36.000 0.00 4.56 33.76 3.51
284 285 5.065914 TCTCTTAAAGACACATGCTTGCTT 58.934 37.500 0.00 0.00 0.00 3.91
285 286 4.645535 TCTCTTAAAGACACATGCTTGCT 58.354 39.130 0.00 0.00 0.00 3.91
286 287 5.362556 TTCTCTTAAAGACACATGCTTGC 57.637 39.130 0.00 0.00 32.27 4.01
287 288 5.049198 TGCTTCTCTTAAAGACACATGCTTG 60.049 40.000 0.00 0.00 32.27 4.01
288 289 5.065914 TGCTTCTCTTAAAGACACATGCTT 58.934 37.500 0.00 0.00 32.27 3.91
289 290 4.645535 TGCTTCTCTTAAAGACACATGCT 58.354 39.130 0.00 0.00 32.27 3.79
290 291 5.362556 TTGCTTCTCTTAAAGACACATGC 57.637 39.130 0.00 0.00 32.27 4.06
291 292 8.697067 CAATTTTGCTTCTCTTAAAGACACATG 58.303 33.333 0.00 0.00 32.27 3.21
292 293 8.416329 ACAATTTTGCTTCTCTTAAAGACACAT 58.584 29.630 0.00 0.00 32.27 3.21
293 294 7.771183 ACAATTTTGCTTCTCTTAAAGACACA 58.229 30.769 0.00 0.00 32.27 3.72
294 295 8.634475 AACAATTTTGCTTCTCTTAAAGACAC 57.366 30.769 0.00 0.00 32.27 3.67
295 296 8.686334 AGAACAATTTTGCTTCTCTTAAAGACA 58.314 29.630 0.00 0.00 32.27 3.41
300 301 9.337396 TGAGTAGAACAATTTTGCTTCTCTTAA 57.663 29.630 7.51 0.00 33.66 1.85
301 302 8.774586 GTGAGTAGAACAATTTTGCTTCTCTTA 58.225 33.333 7.51 0.00 33.66 2.10
302 303 7.519008 CGTGAGTAGAACAATTTTGCTTCTCTT 60.519 37.037 7.51 3.46 33.66 2.85
303 304 6.073548 CGTGAGTAGAACAATTTTGCTTCTCT 60.074 38.462 7.51 8.16 33.66 3.10
304 305 6.073765 TCGTGAGTAGAACAATTTTGCTTCTC 60.074 38.462 0.38 0.38 33.66 2.87
305 306 5.758296 TCGTGAGTAGAACAATTTTGCTTCT 59.242 36.000 10.67 10.67 34.90 2.85
306 307 5.985781 TCGTGAGTAGAACAATTTTGCTTC 58.014 37.500 0.00 0.00 0.00 3.86
307 308 6.371809 TTCGTGAGTAGAACAATTTTGCTT 57.628 33.333 0.00 0.00 0.00 3.91
308 309 6.371809 TTTCGTGAGTAGAACAATTTTGCT 57.628 33.333 0.00 0.00 0.00 3.91
309 310 5.625311 CCTTTCGTGAGTAGAACAATTTTGC 59.375 40.000 0.00 0.00 0.00 3.68
310 311 6.954944 TCCTTTCGTGAGTAGAACAATTTTG 58.045 36.000 0.00 0.00 0.00 2.44
311 312 7.562454 TTCCTTTCGTGAGTAGAACAATTTT 57.438 32.000 0.00 0.00 0.00 1.82
312 313 7.562454 TTTCCTTTCGTGAGTAGAACAATTT 57.438 32.000 0.00 0.00 0.00 1.82
313 314 7.562454 TTTTCCTTTCGTGAGTAGAACAATT 57.438 32.000 0.00 0.00 0.00 2.32
314 315 7.562454 TTTTTCCTTTCGTGAGTAGAACAAT 57.438 32.000 0.00 0.00 0.00 2.71
315 316 6.988622 TTTTTCCTTTCGTGAGTAGAACAA 57.011 33.333 0.00 0.00 0.00 2.83
348 349 8.173130 GCGTCTCTCGGATTTTTCTAATTAAAA 58.827 33.333 0.00 0.00 40.26 1.52
349 350 7.201582 GGCGTCTCTCGGATTTTTCTAATTAAA 60.202 37.037 0.00 0.00 40.26 1.52
350 351 6.257193 GGCGTCTCTCGGATTTTTCTAATTAA 59.743 38.462 0.00 0.00 40.26 1.40
351 352 5.751990 GGCGTCTCTCGGATTTTTCTAATTA 59.248 40.000 0.00 0.00 40.26 1.40
352 353 4.571176 GGCGTCTCTCGGATTTTTCTAATT 59.429 41.667 0.00 0.00 40.26 1.40
353 354 4.120589 GGCGTCTCTCGGATTTTTCTAAT 58.879 43.478 0.00 0.00 40.26 1.73
354 355 3.518590 GGCGTCTCTCGGATTTTTCTAA 58.481 45.455 0.00 0.00 40.26 2.10
355 356 2.159142 GGGCGTCTCTCGGATTTTTCTA 60.159 50.000 0.00 0.00 40.26 2.10
356 357 1.405661 GGGCGTCTCTCGGATTTTTCT 60.406 52.381 0.00 0.00 40.26 2.52
357 358 1.007580 GGGCGTCTCTCGGATTTTTC 58.992 55.000 0.00 0.00 40.26 2.29
358 359 0.323629 TGGGCGTCTCTCGGATTTTT 59.676 50.000 0.00 0.00 40.26 1.94
359 360 0.108138 CTGGGCGTCTCTCGGATTTT 60.108 55.000 0.00 0.00 40.26 1.82
360 361 1.517832 CTGGGCGTCTCTCGGATTT 59.482 57.895 0.00 0.00 40.26 2.17
361 362 3.082579 GCTGGGCGTCTCTCGGATT 62.083 63.158 0.00 0.00 40.26 3.01
362 363 3.532155 GCTGGGCGTCTCTCGGAT 61.532 66.667 0.00 0.00 40.26 4.18
364 365 3.842923 ATGCTGGGCGTCTCTCGG 61.843 66.667 0.00 0.00 40.26 4.63
365 366 2.584418 CATGCTGGGCGTCTCTCG 60.584 66.667 0.00 0.00 43.12 4.04
366 367 2.894387 GCATGCTGGGCGTCTCTC 60.894 66.667 11.37 0.00 0.00 3.20
394 395 1.893808 CACTTTGGTGAGCCGTGCT 60.894 57.895 0.00 0.00 45.61 4.40
395 396 1.891919 TCACTTTGGTGAGCCGTGC 60.892 57.895 0.00 0.00 46.19 5.34
396 397 4.454948 TCACTTTGGTGAGCCGTG 57.545 55.556 0.00 0.00 46.19 4.94
406 407 6.579666 TCAAAATCTCCAAGGATCACTTTG 57.420 37.500 0.00 0.00 37.29 2.77
407 408 6.779539 ACTTCAAAATCTCCAAGGATCACTTT 59.220 34.615 0.00 0.00 37.29 2.66
408 409 6.310149 ACTTCAAAATCTCCAAGGATCACTT 58.690 36.000 0.00 0.00 41.00 3.16
409 410 5.885465 ACTTCAAAATCTCCAAGGATCACT 58.115 37.500 0.00 0.00 0.00 3.41
410 411 5.124617 GGACTTCAAAATCTCCAAGGATCAC 59.875 44.000 0.00 0.00 0.00 3.06
411 412 5.014544 AGGACTTCAAAATCTCCAAGGATCA 59.985 40.000 0.00 0.00 0.00 2.92
412 413 5.504853 AGGACTTCAAAATCTCCAAGGATC 58.495 41.667 0.00 0.00 0.00 3.36
413 414 5.527026 AGGACTTCAAAATCTCCAAGGAT 57.473 39.130 0.00 0.00 0.00 3.24
414 415 5.324832 AAGGACTTCAAAATCTCCAAGGA 57.675 39.130 0.00 0.00 0.00 3.36
415 416 6.410942 AAAAGGACTTCAAAATCTCCAAGG 57.589 37.500 0.00 0.00 0.00 3.61
440 441 1.338136 TGGGCCGGCAAAAGGAAAAA 61.338 50.000 30.85 0.00 0.00 1.94
441 442 1.753368 CTGGGCCGGCAAAAGGAAAA 61.753 55.000 30.85 0.84 0.00 2.29
442 443 2.123251 TGGGCCGGCAAAAGGAAA 60.123 55.556 30.85 0.18 0.00 3.13
443 444 2.600173 CTGGGCCGGCAAAAGGAA 60.600 61.111 30.85 3.69 0.00 3.36
444 445 3.860930 GACTGGGCCGGCAAAAGGA 62.861 63.158 30.85 3.31 0.00 3.36
445 446 3.373565 GACTGGGCCGGCAAAAGG 61.374 66.667 30.85 15.10 0.00 3.11
446 447 2.597217 TGACTGGGCCGGCAAAAG 60.597 61.111 30.85 23.26 0.00 2.27
447 448 2.597217 CTGACTGGGCCGGCAAAA 60.597 61.111 30.85 12.04 0.00 2.44
448 449 4.659172 CCTGACTGGGCCGGCAAA 62.659 66.667 30.85 14.94 0.00 3.68
478 479 4.439472 AAAATGTCGTCGCCGCGC 62.439 61.111 8.21 0.00 0.00 6.86
479 480 2.570581 CAAAATGTCGTCGCCGCG 60.571 61.111 6.39 6.39 0.00 6.46
480 481 1.509162 GTCAAAATGTCGTCGCCGC 60.509 57.895 0.00 0.00 0.00 6.53
481 482 1.225368 CGTCAAAATGTCGTCGCCG 60.225 57.895 0.00 0.00 0.00 6.46
482 483 1.509162 GCGTCAAAATGTCGTCGCC 60.509 57.895 0.00 0.00 38.16 5.54
483 484 0.383737 TTGCGTCAAAATGTCGTCGC 60.384 50.000 0.00 0.00 43.14 5.19
484 485 1.962547 CTTTGCGTCAAAATGTCGTCG 59.037 47.619 6.50 0.00 32.75 5.12
485 486 1.708680 GCTTTGCGTCAAAATGTCGTC 59.291 47.619 6.50 0.00 32.75 4.20
486 487 1.753956 GCTTTGCGTCAAAATGTCGT 58.246 45.000 6.50 0.00 32.75 4.34
499 500 1.062525 CCTATTGGACGCGCTTTGC 59.937 57.895 5.73 0.00 36.23 3.68
500 501 0.652592 CTCCTATTGGACGCGCTTTG 59.347 55.000 5.73 0.00 37.46 2.77
501 502 1.090052 GCTCCTATTGGACGCGCTTT 61.090 55.000 5.73 0.00 37.46 3.51
502 503 1.521681 GCTCCTATTGGACGCGCTT 60.522 57.895 5.73 0.00 37.46 4.68
503 504 2.107141 GCTCCTATTGGACGCGCT 59.893 61.111 5.73 0.00 37.46 5.92
504 505 1.951631 GAGCTCCTATTGGACGCGC 60.952 63.158 5.73 0.00 39.66 6.86
505 506 1.300233 GGAGCTCCTATTGGACGCG 60.300 63.158 26.25 3.53 39.66 6.01
506 507 1.069935 GGGAGCTCCTATTGGACGC 59.930 63.158 31.36 8.41 37.46 5.19
507 508 1.051812 ATGGGAGCTCCTATTGGACG 58.948 55.000 31.36 0.00 37.46 4.79
508 509 3.584733 AAATGGGAGCTCCTATTGGAC 57.415 47.619 36.55 18.50 44.98 4.02
509 510 3.527253 TCAAAATGGGAGCTCCTATTGGA 59.473 43.478 36.55 31.80 44.98 3.53
510 511 3.902218 TCAAAATGGGAGCTCCTATTGG 58.098 45.455 36.55 30.47 44.98 3.16
511 512 4.952335 ACTTCAAAATGGGAGCTCCTATTG 59.048 41.667 36.55 28.41 44.98 1.90
513 514 4.476479 AGACTTCAAAATGGGAGCTCCTAT 59.524 41.667 31.36 28.20 39.03 2.57
514 515 3.846588 AGACTTCAAAATGGGAGCTCCTA 59.153 43.478 31.36 27.17 36.20 2.94
515 516 2.646798 AGACTTCAAAATGGGAGCTCCT 59.353 45.455 31.36 11.02 36.20 3.69
516 517 3.078891 AGACTTCAAAATGGGAGCTCC 57.921 47.619 25.59 25.59 0.00 4.70
517 518 5.459536 AAAAGACTTCAAAATGGGAGCTC 57.540 39.130 4.71 4.71 0.00 4.09
518 519 5.876651 AAAAAGACTTCAAAATGGGAGCT 57.123 34.783 0.00 0.00 0.00 4.09
544 545 8.511321 GCTTTCAAAGAAAAAGGAAAAAGGAAA 58.489 29.630 0.00 0.00 34.88 3.13
545 546 7.882791 AGCTTTCAAAGAAAAAGGAAAAAGGAA 59.117 29.630 0.00 0.00 34.88 3.36
546 547 7.394016 AGCTTTCAAAGAAAAAGGAAAAAGGA 58.606 30.769 0.00 0.00 34.88 3.36
547 548 7.615582 AGCTTTCAAAGAAAAAGGAAAAAGG 57.384 32.000 0.00 0.00 34.88 3.11
548 549 9.897744 AAAAGCTTTCAAAGAAAAAGGAAAAAG 57.102 25.926 13.10 0.00 34.88 2.27
550 551 9.891828 GAAAAAGCTTTCAAAGAAAAAGGAAAA 57.108 25.926 13.10 0.00 40.67 2.29
551 552 9.061435 TGAAAAAGCTTTCAAAGAAAAAGGAAA 57.939 25.926 13.10 0.00 46.24 3.13
552 553 8.614469 TGAAAAAGCTTTCAAAGAAAAAGGAA 57.386 26.923 13.10 0.00 46.24 3.36
565 566 8.931385 TGCCATAGAATATTGAAAAAGCTTTC 57.069 30.769 13.10 1.12 41.25 2.62
566 567 7.983484 CCTGCCATAGAATATTGAAAAAGCTTT 59.017 33.333 5.69 5.69 0.00 3.51
567 568 7.418254 CCCTGCCATAGAATATTGAAAAAGCTT 60.418 37.037 0.00 0.00 0.00 3.74
568 569 6.041296 CCCTGCCATAGAATATTGAAAAAGCT 59.959 38.462 0.00 0.00 0.00 3.74
569 570 6.218746 CCCTGCCATAGAATATTGAAAAAGC 58.781 40.000 0.00 0.00 0.00 3.51
570 571 6.739565 GCCCCTGCCATAGAATATTGAAAAAG 60.740 42.308 0.00 0.00 0.00 2.27
571 572 5.070313 GCCCCTGCCATAGAATATTGAAAAA 59.930 40.000 0.00 0.00 0.00 1.94
572 573 4.588528 GCCCCTGCCATAGAATATTGAAAA 59.411 41.667 0.00 0.00 0.00 2.29
573 574 4.140947 AGCCCCTGCCATAGAATATTGAAA 60.141 41.667 0.00 0.00 38.69 2.69
574 575 3.398967 AGCCCCTGCCATAGAATATTGAA 59.601 43.478 0.00 0.00 38.69 2.69
575 576 2.988859 AGCCCCTGCCATAGAATATTGA 59.011 45.455 0.00 0.00 38.69 2.57
576 577 3.350833 GAGCCCCTGCCATAGAATATTG 58.649 50.000 0.00 0.00 38.69 1.90
577 578 2.310052 GGAGCCCCTGCCATAGAATATT 59.690 50.000 0.00 0.00 38.69 1.28
578 579 1.918957 GGAGCCCCTGCCATAGAATAT 59.081 52.381 0.00 0.00 38.69 1.28
579 580 1.362224 GGAGCCCCTGCCATAGAATA 58.638 55.000 0.00 0.00 38.69 1.75
580 581 1.430369 GGGAGCCCCTGCCATAGAAT 61.430 60.000 3.16 0.00 41.77 2.40
581 582 2.078665 GGGAGCCCCTGCCATAGAA 61.079 63.158 3.16 0.00 41.77 2.10
582 583 2.448542 GGGAGCCCCTGCCATAGA 60.449 66.667 3.16 0.00 41.77 1.98
599 600 4.740822 CCAGGACCCCTTTGCCGG 62.741 72.222 0.00 0.00 0.00 6.13
600 601 3.507377 AACCAGGACCCCTTTGCCG 62.507 63.158 0.00 0.00 0.00 5.69
601 602 1.606601 GAACCAGGACCCCTTTGCC 60.607 63.158 0.00 0.00 0.00 4.52
602 603 1.971695 CGAACCAGGACCCCTTTGC 60.972 63.158 0.00 0.00 0.00 3.68
603 604 0.605589 GACGAACCAGGACCCCTTTG 60.606 60.000 0.00 0.00 0.00 2.77
604 605 0.767060 AGACGAACCAGGACCCCTTT 60.767 55.000 0.00 0.00 0.00 3.11
605 606 0.115745 TAGACGAACCAGGACCCCTT 59.884 55.000 0.00 0.00 0.00 3.95
635 636 1.208776 AGTATTACCGGCCCACACTTC 59.791 52.381 0.00 0.00 0.00 3.01
975 976 2.980568 TCTCTCTCTGTTCTCTCGGTC 58.019 52.381 0.00 0.00 0.00 4.79
976 977 3.426787 TTCTCTCTCTGTTCTCTCGGT 57.573 47.619 0.00 0.00 0.00 4.69
1216 1217 3.311322 CGTAAGCTACCAGACAGAGAGAG 59.689 52.174 0.00 0.00 0.00 3.20
1258 1259 2.045926 CCCCAGAACCGGAGCAAG 60.046 66.667 9.46 0.00 0.00 4.01
1284 1285 3.918220 GAACGAGCGGCGCATCAG 61.918 66.667 35.02 22.46 46.04 2.90
1318 1319 0.171007 AATCGGGCAATCGCACAAAG 59.829 50.000 0.00 0.00 44.10 2.77
1353 1354 2.544685 CTAGCAGAACACAGGAATCCG 58.455 52.381 0.00 0.00 0.00 4.18
1359 1360 0.687354 ACCACCTAGCAGAACACAGG 59.313 55.000 0.00 0.00 0.00 4.00
1370 1371 1.873591 GAAGCACAACACACCACCTAG 59.126 52.381 0.00 0.00 0.00 3.02
1379 1380 3.657625 CGAAAATACACGAAGCACAACAC 59.342 43.478 0.00 0.00 0.00 3.32
1380 1381 3.556365 TCGAAAATACACGAAGCACAACA 59.444 39.130 0.00 0.00 35.62 3.33
1381 1382 3.898361 GTCGAAAATACACGAAGCACAAC 59.102 43.478 0.00 0.00 40.12 3.32
1382 1383 3.362207 CGTCGAAAATACACGAAGCACAA 60.362 43.478 0.00 0.00 40.12 3.33
1383 1384 2.154198 CGTCGAAAATACACGAAGCACA 59.846 45.455 0.00 0.00 40.12 4.57
1384 1385 2.471749 CCGTCGAAAATACACGAAGCAC 60.472 50.000 0.00 0.00 40.12 4.40
1385 1386 1.722464 CCGTCGAAAATACACGAAGCA 59.278 47.619 0.00 0.00 40.12 3.91
1386 1387 1.723003 ACCGTCGAAAATACACGAAGC 59.277 47.619 0.00 0.00 40.12 3.86
1387 1388 4.379374 AAACCGTCGAAAATACACGAAG 57.621 40.909 0.00 0.00 40.12 3.79
1388 1389 4.792528 AAAACCGTCGAAAATACACGAA 57.207 36.364 0.00 0.00 40.12 3.85
1389 1390 4.981674 AGTAAAACCGTCGAAAATACACGA 59.018 37.500 0.00 0.00 35.49 4.35
1390 1391 5.254669 AGTAAAACCGTCGAAAATACACG 57.745 39.130 0.00 0.00 0.00 4.49
1391 1392 5.847515 CCAAGTAAAACCGTCGAAAATACAC 59.152 40.000 0.00 0.00 0.00 2.90
1392 1393 5.757320 TCCAAGTAAAACCGTCGAAAATACA 59.243 36.000 0.00 0.00 0.00 2.29
1393 1394 6.073369 GTCCAAGTAAAACCGTCGAAAATAC 58.927 40.000 0.00 0.00 0.00 1.89
1394 1395 5.990996 AGTCCAAGTAAAACCGTCGAAAATA 59.009 36.000 0.00 0.00 0.00 1.40
1395 1396 4.818005 AGTCCAAGTAAAACCGTCGAAAAT 59.182 37.500 0.00 0.00 0.00 1.82
1396 1397 4.190772 AGTCCAAGTAAAACCGTCGAAAA 58.809 39.130 0.00 0.00 0.00 2.29
1397 1398 3.795877 AGTCCAAGTAAAACCGTCGAAA 58.204 40.909 0.00 0.00 0.00 3.46
1398 1399 3.457610 AGTCCAAGTAAAACCGTCGAA 57.542 42.857 0.00 0.00 0.00 3.71
1399 1400 3.569701 AGTAGTCCAAGTAAAACCGTCGA 59.430 43.478 0.00 0.00 0.00 4.20
1400 1401 3.905784 AGTAGTCCAAGTAAAACCGTCG 58.094 45.455 0.00 0.00 0.00 5.12
1401 1402 4.861462 GCTAGTAGTCCAAGTAAAACCGTC 59.139 45.833 0.00 0.00 0.00 4.79
1402 1403 4.525874 AGCTAGTAGTCCAAGTAAAACCGT 59.474 41.667 0.00 0.00 0.00 4.83
1403 1404 5.069501 AGCTAGTAGTCCAAGTAAAACCG 57.930 43.478 0.00 0.00 0.00 4.44
1404 1405 6.228995 ACAAGCTAGTAGTCCAAGTAAAACC 58.771 40.000 0.00 0.00 0.00 3.27
1414 1429 4.409187 AGGCCTATACAAGCTAGTAGTCC 58.591 47.826 1.29 0.00 0.00 3.85
1485 1652 1.588082 CCAGCGCAAAGGCAAAGAT 59.412 52.632 11.47 0.00 41.24 2.40
1523 1690 4.690748 CAGTTTTCGTTCTCAAGCTGGATA 59.309 41.667 0.00 0.00 29.99 2.59
1527 1694 4.201812 TGTTCAGTTTTCGTTCTCAAGCTG 60.202 41.667 0.00 0.00 33.72 4.24
1530 1697 6.801862 AGTTTTGTTCAGTTTTCGTTCTCAAG 59.198 34.615 0.00 0.00 0.00 3.02
1582 1749 2.121564 CTATTGCGCCCGCCAATCTG 62.122 60.000 4.18 4.14 41.09 2.90
1613 1788 5.977635 TGACTACATCCCTAACTCAATGTG 58.022 41.667 0.00 0.00 34.39 3.21
1719 1894 8.424133 AGGCTGAAATTTAAGTGAAACAGATTT 58.576 29.630 4.42 0.00 41.43 2.17
1726 1901 5.772521 GCTCAGGCTGAAATTTAAGTGAAA 58.227 37.500 19.29 0.00 35.22 2.69
1809 1984 3.127548 CAGGAATCTCCCATGTTGAAACG 59.872 47.826 0.00 0.00 37.19 3.60
1872 2048 5.407407 AGAGTATTGAGTCAAACCACGAT 57.593 39.130 10.14 0.00 0.00 3.73
1881 2057 8.318412 TGCCAAGTAAATAAGAGTATTGAGTCA 58.682 33.333 0.00 0.00 30.04 3.41
1884 2060 8.492673 TGTGCCAAGTAAATAAGAGTATTGAG 57.507 34.615 0.00 0.00 30.04 3.02
1907 2083 5.714333 TGTGCCAGGTAATCACAAATAATGT 59.286 36.000 0.00 0.00 45.34 2.71
1910 2133 7.559533 ACATATGTGCCAGGTAATCACAAATAA 59.440 33.333 7.78 0.00 42.97 1.40
1914 2137 4.854173 ACATATGTGCCAGGTAATCACAA 58.146 39.130 7.78 0.00 42.97 3.33
1916 2139 5.611374 ACTACATATGTGCCAGGTAATCAC 58.389 41.667 18.81 0.00 0.00 3.06
1924 2147 5.016051 ACAGAAGACTACATATGTGCCAG 57.984 43.478 18.81 10.35 0.00 4.85
1945 2168 7.513190 CAGTACAGAGTGCATAAGAAACTAC 57.487 40.000 0.00 0.00 0.00 2.73
2064 2296 7.182026 TCCTCCTTTATATTTCAGTTCTCCACA 59.818 37.037 0.00 0.00 0.00 4.17
2262 2502 5.907207 TCACAAATCAGTACCTGCTAGATC 58.093 41.667 0.00 0.00 0.00 2.75
2334 4522 2.741228 GCAAACCAAATGCACTGTTGGA 60.741 45.455 25.01 0.00 46.11 3.53
2378 4566 5.710513 AATTGTACAGCATGCTGAGAAAA 57.289 34.783 45.50 33.11 46.30 2.29
2385 4573 7.661040 AGTTCTTAAAAATTGTACAGCATGCT 58.339 30.769 16.30 16.30 42.53 3.79
2386 4574 7.873739 AGTTCTTAAAAATTGTACAGCATGC 57.126 32.000 10.51 10.51 42.53 4.06
2389 4577 9.515020 CAGAAAGTTCTTAAAAATTGTACAGCA 57.485 29.630 0.00 0.00 34.74 4.41
2390 4578 9.516314 ACAGAAAGTTCTTAAAAATTGTACAGC 57.484 29.630 0.00 0.00 34.74 4.40
2447 4647 6.904463 ATGTTGGCAGCATCAATGAATATA 57.096 33.333 11.33 0.00 0.00 0.86
2448 4648 5.801531 ATGTTGGCAGCATCAATGAATAT 57.198 34.783 11.33 0.00 0.00 1.28
2485 4688 4.180817 GGCAGCACCGCTAAAATTATTTT 58.819 39.130 8.07 8.07 36.40 1.82
2498 4701 1.028330 ATCTCATGTTGGCAGCACCG 61.028 55.000 6.06 0.85 43.94 4.94
2528 4731 4.989797 GCACCATCAATGAATTTCACAACA 59.010 37.500 0.15 0.00 0.00 3.33
2534 4737 7.281991 GTGTAAAGCACCATCAATGAATTTC 57.718 36.000 0.00 0.00 42.10 2.17
2579 4782 6.582636 TGCACTAGGGAGAACAGTTATTATG 58.417 40.000 0.00 0.00 0.00 1.90
2586 4789 1.556911 CCATGCACTAGGGAGAACAGT 59.443 52.381 0.00 0.00 29.57 3.55
2621 4824 0.669077 ACGAGTTATAGCTCCGCCTG 59.331 55.000 10.63 0.00 32.11 4.85
2629 4832 4.984785 TGATGCAAGATGACGAGTTATAGC 59.015 41.667 0.00 0.00 0.00 2.97
2676 4880 1.530293 CTGTGACAAGCAGAAGCAGAC 59.470 52.381 0.00 0.00 45.49 3.51
2782 4992 3.872240 GCAGCACCTCCAAACCTAACATA 60.872 47.826 0.00 0.00 0.00 2.29
2804 5015 9.672086 GTAACTACATAGAGCAGACTCATAAAG 57.328 37.037 0.00 0.00 46.09 1.85
2868 5079 4.502016 TCACTGAAGCAAACAAAATGCAA 58.498 34.783 0.00 0.00 46.22 4.08
2885 5096 8.004087 AGAAATGAAATGATAACCCATCACTG 57.996 34.615 0.00 0.00 46.41 3.66
2892 5103 5.066505 ACGCTGAGAAATGAAATGATAACCC 59.933 40.000 0.00 0.00 0.00 4.11
2893 5104 5.967674 CACGCTGAGAAATGAAATGATAACC 59.032 40.000 0.00 0.00 0.00 2.85
2896 5107 4.877823 AGCACGCTGAGAAATGAAATGATA 59.122 37.500 0.00 0.00 0.00 2.15
2989 5201 7.380333 TGAATTATTACGTGTACAATAGGCTCG 59.620 37.037 0.00 0.00 0.00 5.03
3003 5215 6.588373 GGCACCACAAAAATGAATTATTACGT 59.412 34.615 0.00 0.00 0.00 3.57
3073 6271 2.179517 GTGCCACCGAGTCGAGAG 59.820 66.667 15.64 2.56 0.00 3.20
3273 6474 1.670811 CGATTGTACCATCCCAGCAAC 59.329 52.381 1.56 0.00 0.00 4.17
3428 6629 5.421056 AGGGATCATGTAGAACGTGACTTTA 59.579 40.000 4.18 0.00 45.78 1.85
3452 6653 0.037734 TCGACACCAGGAGCAGAGTA 59.962 55.000 0.00 0.00 0.00 2.59
3635 6836 6.769512 AGGCACTTAGAACAGATCAAAGTAA 58.230 36.000 0.00 0.00 27.25 2.24
3699 6900 5.864474 CGATTATTCCAGTGTACAGATAGGC 59.136 44.000 0.00 0.00 0.00 3.93
3702 6903 7.576861 TGACGATTATTCCAGTGTACAGATA 57.423 36.000 0.00 0.00 0.00 1.98
3723 6924 1.000843 GGGCATTTTGTCCACCTTGAC 59.999 52.381 0.00 0.00 42.98 3.18
3726 6927 0.178975 TCGGGCATTTTGTCCACCTT 60.179 50.000 0.00 0.00 43.88 3.50
3747 6948 2.333014 GAGACAGAAGAAGAACCAGCG 58.667 52.381 0.00 0.00 0.00 5.18
3773 6974 2.208326 AGAAAAACGCAGCAACTTGG 57.792 45.000 0.00 0.00 0.00 3.61
3808 7009 9.513906 TTACTTGTCCATTAATCAATCACAGAA 57.486 29.630 0.00 0.00 0.00 3.02
3809 7010 9.685276 ATTACTTGTCCATTAATCAATCACAGA 57.315 29.630 0.00 0.00 0.00 3.41
3838 7039 3.508012 AGCTAGTACTCTGTGACAACTGG 59.492 47.826 0.00 0.00 0.00 4.00
3951 7152 8.361169 ACAGGTAAACATGGCATTTACTAATT 57.639 30.769 18.24 0.00 40.72 1.40
3952 7153 7.954666 ACAGGTAAACATGGCATTTACTAAT 57.045 32.000 18.24 7.04 40.72 1.73
3987 7203 6.636705 ACACTACTACAACACAGAGAAACAA 58.363 36.000 0.00 0.00 0.00 2.83
3992 7208 4.466827 TGGACACTACTACAACACAGAGA 58.533 43.478 0.00 0.00 0.00 3.10
3993 7209 4.278669 ACTGGACACTACTACAACACAGAG 59.721 45.833 0.00 0.00 0.00 3.35
3994 7210 4.212716 ACTGGACACTACTACAACACAGA 58.787 43.478 0.00 0.00 0.00 3.41
3995 7211 4.278669 AGACTGGACACTACTACAACACAG 59.721 45.833 0.00 0.00 0.00 3.66
3996 7212 4.037565 CAGACTGGACACTACTACAACACA 59.962 45.833 0.00 0.00 0.00 3.72
4006 7222 2.037251 GCTCCAAACAGACTGGACACTA 59.963 50.000 7.51 0.00 38.07 2.74
4036 7252 3.131396 CAGAGTTACAAAGGCAACGAGT 58.869 45.455 0.00 0.00 46.39 4.18
4066 7282 7.777910 CCTGGAAAATTTAGATGTATGGTACCA 59.222 37.037 18.99 18.99 0.00 3.25
4079 7295 6.037610 CGGAATCAGAGACCTGGAAAATTTAG 59.962 42.308 0.00 0.00 40.76 1.85
4085 7301 2.257207 ACGGAATCAGAGACCTGGAAA 58.743 47.619 0.00 0.00 40.76 3.13
4096 7312 2.222796 CGCACACATGTAACGGAATCAG 60.223 50.000 0.00 0.00 0.00 2.90
4107 7323 2.674852 GTCAATCATCTCGCACACATGT 59.325 45.455 0.00 0.00 0.00 3.21
4112 7328 2.029110 TGTCTGTCAATCATCTCGCACA 60.029 45.455 0.00 0.00 0.00 4.57
4113 7329 2.346847 GTGTCTGTCAATCATCTCGCAC 59.653 50.000 0.00 0.00 0.00 5.34
4138 7354 5.557576 ATTATCTATCAGCTGCTGGTCAA 57.442 39.130 27.79 13.93 31.51 3.18
4158 7374 2.303022 CACCTCACCAGACACCACTATT 59.697 50.000 0.00 0.00 0.00 1.73
4160 7376 1.338107 CACCTCACCAGACACCACTA 58.662 55.000 0.00 0.00 0.00 2.74
4256 7472 3.259064 TCGAAACAGGCTTTATTCTCCG 58.741 45.455 0.00 0.00 0.00 4.63
4261 7477 5.179555 GTGTTCTCTCGAAACAGGCTTTATT 59.820 40.000 1.45 0.00 0.00 1.40
4262 7478 4.691216 GTGTTCTCTCGAAACAGGCTTTAT 59.309 41.667 1.45 0.00 0.00 1.40
4263 7479 4.056050 GTGTTCTCTCGAAACAGGCTTTA 58.944 43.478 1.45 0.00 0.00 1.85
4264 7480 2.872858 GTGTTCTCTCGAAACAGGCTTT 59.127 45.455 1.45 0.00 0.00 3.51
4265 7481 2.484889 GTGTTCTCTCGAAACAGGCTT 58.515 47.619 1.45 0.00 0.00 4.35
4266 7482 1.603172 CGTGTTCTCTCGAAACAGGCT 60.603 52.381 7.88 0.00 33.21 4.58
4267 7483 0.784778 CGTGTTCTCTCGAAACAGGC 59.215 55.000 7.88 0.00 33.21 4.85
4268 7484 2.417339 TCGTGTTCTCTCGAAACAGG 57.583 50.000 12.66 12.66 36.79 4.00
4269 7485 3.629058 TCTTCGTGTTCTCTCGAAACAG 58.371 45.455 1.45 0.00 44.71 3.16
4270 7486 3.703286 TCTTCGTGTTCTCTCGAAACA 57.297 42.857 0.00 0.00 44.71 2.83
4271 7487 3.121295 GCTTCTTCGTGTTCTCTCGAAAC 60.121 47.826 0.00 0.00 44.71 2.78
4272 7488 3.050619 GCTTCTTCGTGTTCTCTCGAAA 58.949 45.455 0.00 0.00 44.71 3.46
4273 7489 2.034179 TGCTTCTTCGTGTTCTCTCGAA 59.966 45.455 0.00 0.00 43.76 3.71
4274 7490 1.607148 TGCTTCTTCGTGTTCTCTCGA 59.393 47.619 0.00 0.00 37.71 4.04
4275 7491 1.982223 CTGCTTCTTCGTGTTCTCTCG 59.018 52.381 0.00 0.00 0.00 4.04
4276 7492 2.728839 CACTGCTTCTTCGTGTTCTCTC 59.271 50.000 0.00 0.00 0.00 3.20
4277 7493 2.101582 ACACTGCTTCTTCGTGTTCTCT 59.898 45.455 0.00 0.00 38.63 3.10
4278 7494 2.219674 CACACTGCTTCTTCGTGTTCTC 59.780 50.000 0.00 0.00 39.66 2.87
4279 7495 2.205074 CACACTGCTTCTTCGTGTTCT 58.795 47.619 0.00 0.00 39.66 3.01
4280 7496 1.933853 ACACACTGCTTCTTCGTGTTC 59.066 47.619 0.00 0.00 39.66 3.18
4290 7506 4.535526 AAAACCAAGAAACACACTGCTT 57.464 36.364 0.00 0.00 0.00 3.91
4324 7540 4.261280 GCGGTGGCAAGTTTTCTAGTAAAA 60.261 41.667 0.00 0.00 39.62 1.52
4325 7541 3.251487 GCGGTGGCAAGTTTTCTAGTAAA 59.749 43.478 0.00 0.00 39.62 2.01
4334 7550 2.193536 GTCTGGCGGTGGCAAGTTT 61.194 57.895 0.00 0.00 41.29 2.66
4358 7574 3.244875 TGAGGACCATGCACAAGTACATT 60.245 43.478 0.00 0.00 0.00 2.71
4363 7579 0.607489 GCTGAGGACCATGCACAAGT 60.607 55.000 0.00 0.00 0.00 3.16
4367 7583 1.002868 ACAGCTGAGGACCATGCAC 60.003 57.895 23.35 0.00 0.00 4.57
4374 7590 4.594367 CTGCTCACAGCTGAGGAC 57.406 61.111 23.35 8.99 43.90 3.85
4391 7607 0.674895 AGGGAAGCAGAATGTGACGC 60.675 55.000 0.00 0.00 39.31 5.19
4392 7608 2.093973 AGTAGGGAAGCAGAATGTGACG 60.094 50.000 0.00 0.00 39.31 4.35
4398 7614 5.961421 AGAGTAGAAAGTAGGGAAGCAGAAT 59.039 40.000 0.00 0.00 0.00 2.40
4493 7716 9.783256 CTCCCTTTGTAAAGAAATATAAAACCG 57.217 33.333 5.95 0.00 38.28 4.44
4513 7736 6.838382 AGTCTTTTTACACATGTACTCCCTT 58.162 36.000 0.00 0.00 0.00 3.95
4532 7755 2.298729 GGAGACTGTCAGCTTGAGTCTT 59.701 50.000 16.50 5.02 39.59 3.01
4534 7757 1.615883 TGGAGACTGTCAGCTTGAGTC 59.384 52.381 10.88 8.03 0.00 3.36
4542 7765 1.476085 CACCTAGCTGGAGACTGTCAG 59.524 57.143 10.88 0.00 39.71 3.51
4572 7795 8.474025 CCATGGAGAGTTGGAGACTATATAATC 58.526 40.741 5.56 0.00 39.19 1.75
4573 7796 7.958583 ACCATGGAGAGTTGGAGACTATATAAT 59.041 37.037 21.47 0.00 39.19 1.28
4574 7797 7.306013 ACCATGGAGAGTTGGAGACTATATAA 58.694 38.462 21.47 0.00 39.19 0.98
4575 7798 6.864421 ACCATGGAGAGTTGGAGACTATATA 58.136 40.000 21.47 0.00 39.19 0.86
4576 7799 5.721225 ACCATGGAGAGTTGGAGACTATAT 58.279 41.667 21.47 0.00 39.19 0.86
4577 7800 5.144159 ACCATGGAGAGTTGGAGACTATA 57.856 43.478 21.47 0.00 39.19 1.31
4578 7801 4.000928 ACCATGGAGAGTTGGAGACTAT 57.999 45.455 21.47 0.00 39.19 2.12
4579 7802 3.474798 ACCATGGAGAGTTGGAGACTA 57.525 47.619 21.47 0.00 39.19 2.59
4580 7803 2.334006 ACCATGGAGAGTTGGAGACT 57.666 50.000 21.47 0.00 42.70 3.24
4581 7804 3.769844 TCTTACCATGGAGAGTTGGAGAC 59.230 47.826 21.47 0.00 36.79 3.36
4582 7805 4.026744 CTCTTACCATGGAGAGTTGGAGA 58.973 47.826 21.47 8.10 35.72 3.71
4583 7806 4.399004 CTCTTACCATGGAGAGTTGGAG 57.601 50.000 21.47 11.18 35.72 3.86
4589 7812 4.499183 GACACAACTCTTACCATGGAGAG 58.501 47.826 22.88 22.88 43.90 3.20
4590 7813 3.260884 GGACACAACTCTTACCATGGAGA 59.739 47.826 21.47 11.06 34.11 3.71
4591 7814 3.600388 GGACACAACTCTTACCATGGAG 58.400 50.000 21.47 7.80 35.86 3.86
4592 7815 2.304761 GGGACACAACTCTTACCATGGA 59.695 50.000 21.47 0.00 0.00 3.41
4593 7816 2.305927 AGGGACACAACTCTTACCATGG 59.694 50.000 11.19 11.19 0.00 3.66
4594 7817 3.703001 AGGGACACAACTCTTACCATG 57.297 47.619 0.00 0.00 0.00 3.66
4595 7818 4.104102 TGAAAGGGACACAACTCTTACCAT 59.896 41.667 0.00 0.00 29.74 3.55
4596 7819 3.456644 TGAAAGGGACACAACTCTTACCA 59.543 43.478 0.00 0.00 29.74 3.25
4597 7820 4.081322 TGAAAGGGACACAACTCTTACC 57.919 45.455 0.00 0.00 29.74 2.85
4598 7821 6.635030 AATTGAAAGGGACACAACTCTTAC 57.365 37.500 0.00 0.00 29.74 2.34
4599 7822 7.447238 CCTAAATTGAAAGGGACACAACTCTTA 59.553 37.037 0.00 0.00 29.74 2.10
4600 7823 6.265422 CCTAAATTGAAAGGGACACAACTCTT 59.735 38.462 0.00 0.00 31.29 2.85
4601 7824 5.770162 CCTAAATTGAAAGGGACACAACTCT 59.230 40.000 0.00 0.00 0.00 3.24
4602 7825 5.768164 TCCTAAATTGAAAGGGACACAACTC 59.232 40.000 2.79 0.00 33.40 3.01
4603 7826 5.701224 TCCTAAATTGAAAGGGACACAACT 58.299 37.500 2.79 0.00 33.40 3.16
4604 7827 5.048013 CCTCCTAAATTGAAAGGGACACAAC 60.048 44.000 2.79 0.00 33.40 3.32
4605 7828 5.076873 CCTCCTAAATTGAAAGGGACACAA 58.923 41.667 2.79 0.00 33.40 3.33
4606 7829 4.105697 ACCTCCTAAATTGAAAGGGACACA 59.894 41.667 2.79 0.00 33.40 3.72
4607 7830 4.663334 ACCTCCTAAATTGAAAGGGACAC 58.337 43.478 2.79 0.00 33.40 3.67
4608 7831 4.601857 AGACCTCCTAAATTGAAAGGGACA 59.398 41.667 2.79 0.00 33.40 4.02
4609 7832 4.944317 CAGACCTCCTAAATTGAAAGGGAC 59.056 45.833 2.79 0.00 33.40 4.46
4610 7833 4.567747 GCAGACCTCCTAAATTGAAAGGGA 60.568 45.833 2.79 0.00 33.40 4.20
4611 7834 3.696548 GCAGACCTCCTAAATTGAAAGGG 59.303 47.826 2.79 0.00 33.40 3.95
4612 7835 4.397417 CAGCAGACCTCCTAAATTGAAAGG 59.603 45.833 0.00 0.00 0.00 3.11
4613 7836 5.248640 TCAGCAGACCTCCTAAATTGAAAG 58.751 41.667 0.00 0.00 0.00 2.62
4614 7837 5.241403 TCAGCAGACCTCCTAAATTGAAA 57.759 39.130 0.00 0.00 0.00 2.69
4615 7838 4.908601 TCAGCAGACCTCCTAAATTGAA 57.091 40.909 0.00 0.00 0.00 2.69
4616 7839 4.471025 TGATCAGCAGACCTCCTAAATTGA 59.529 41.667 0.00 0.00 0.00 2.57
4617 7840 4.774124 TGATCAGCAGACCTCCTAAATTG 58.226 43.478 0.00 0.00 0.00 2.32
4631 7854 4.190772 TGCGAATAATTGACTGATCAGCA 58.809 39.130 22.83 17.59 35.83 4.41
4632 7855 4.801147 TGCGAATAATTGACTGATCAGC 57.199 40.909 22.83 15.26 35.83 4.26


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.