Multiple sequence alignment - TraesCS3A01G454100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G454100 chr3A 100.000 2681 0 0 1 2681 692510635 692507955 0.000000e+00 4951.0
1 TraesCS3A01G454100 chr3A 78.857 700 79 22 1342 2002 692540719 692540050 2.480000e-110 409.0
2 TraesCS3A01G454100 chr3A 77.208 351 46 24 291 632 692603758 692603433 9.870000e-40 174.0
3 TraesCS3A01G454100 chr3A 86.792 53 7 0 293 345 38341438 38341490 2.880000e-05 60.2
4 TraesCS3A01G454100 chr3A 100.000 31 0 0 2007 2037 688902020 688901990 1.040000e-04 58.4
5 TraesCS3A01G454100 chr3D 92.953 823 38 13 1 810 555444543 555443728 0.000000e+00 1181.0
6 TraesCS3A01G454100 chr3D 86.478 636 54 10 2077 2680 555429744 555429109 0.000000e+00 669.0
7 TraesCS3A01G454100 chr3D 89.082 403 23 10 811 1192 555443686 555443284 5.190000e-132 481.0
8 TraesCS3A01G454100 chr3D 80.172 696 80 20 1348 2006 555448042 555447368 4.040000e-128 468.0
9 TraesCS3A01G454100 chr3D 84.259 216 25 9 1797 2005 555453608 555453395 4.530000e-48 202.0
10 TraesCS3A01G454100 chr3D 78.173 197 29 8 909 1105 555450220 555450038 2.180000e-21 113.0
11 TraesCS3A01G454100 chr3B 87.979 574 34 9 1297 1851 738629542 738628985 0.000000e+00 645.0
12 TraesCS3A01G454100 chr3B 83.613 714 57 22 1174 1857 738681474 738680791 1.360000e-172 616.0
13 TraesCS3A01G454100 chr3B 81.961 255 32 12 1752 1995 738684550 738684299 1.260000e-48 204.0
14 TraesCS3A01G454100 chrUn 82.793 401 62 5 1311 1711 302653816 302653423 4.250000e-93 351.0
15 TraesCS3A01G454100 chr4A 80.410 439 62 13 2009 2439 12376914 12377336 2.000000e-81 313.0
16 TraesCS3A01G454100 chr7D 83.333 306 45 4 1405 1710 590609790 590609491 7.310000e-71 278.0
17 TraesCS3A01G454100 chr7D 100.000 30 0 0 2007 2036 271752951 271752922 3.730000e-04 56.5
18 TraesCS3A01G454100 chr2A 84.236 203 18 6 2009 2211 245823832 245823644 4.560000e-43 185.0
19 TraesCS3A01G454100 chr5B 87.500 56 2 4 1982 2036 45943990 45943939 2.880000e-05 60.2
20 TraesCS3A01G454100 chr5B 100.000 30 0 0 2007 2036 610966975 610966946 3.730000e-04 56.5
21 TraesCS3A01G454100 chr6D 100.000 31 0 0 2007 2037 472716624 472716654 1.040000e-04 58.4
22 TraesCS3A01G454100 chr7B 100.000 30 0 0 2007 2036 34609757 34609728 3.730000e-04 56.5
23 TraesCS3A01G454100 chr6A 94.444 36 2 0 2000 2035 84047071 84047106 3.730000e-04 56.5
24 TraesCS3A01G454100 chr6A 100.000 30 0 0 2007 2036 517669805 517669776 3.730000e-04 56.5
25 TraesCS3A01G454100 chr1A 100.000 30 0 0 2006 2035 44365880 44365909 3.730000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G454100 chr3A 692507955 692510635 2680 True 4951 4951 100.0000 1 2681 1 chr3A.!!$R2 2680
1 TraesCS3A01G454100 chr3A 692540050 692540719 669 True 409 409 78.8570 1342 2002 1 chr3A.!!$R3 660
2 TraesCS3A01G454100 chr3D 555429109 555429744 635 True 669 669 86.4780 2077 2680 1 chr3D.!!$R1 603
3 TraesCS3A01G454100 chr3D 555443284 555453608 10324 True 489 1181 84.9278 1 2006 5 chr3D.!!$R2 2005
4 TraesCS3A01G454100 chr3B 738628985 738629542 557 True 645 645 87.9790 1297 1851 1 chr3B.!!$R1 554
5 TraesCS3A01G454100 chr3B 738680791 738684550 3759 True 410 616 82.7870 1174 1995 2 chr3B.!!$R2 821

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
150 151 0.254178 AGAGCATGCCCTTAGTGGTG 59.746 55.0 15.66 0.0 0.00 4.17 F
1054 1055 0.102481 AAGTGTATACGCCAGCCGAG 59.898 55.0 12.78 0.0 41.02 4.63 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1081 1082 0.035820 TATGTCCAGGCGAACAACCC 60.036 55.0 0.00 0.00 0.00 4.11 R
2004 6581 0.816373 GTGAACGGAGGGAGTAGTCC 59.184 60.0 8.22 8.22 43.05 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 9.862371 CATAGTAGAGAAGAGAGAGAGATACTC 57.138 40.741 0.00 0.00 45.22 2.59
37 38 2.946329 GAGAGATACTCGTCCTTGAGCA 59.054 50.000 0.00 0.00 39.68 4.26
38 39 2.685897 AGAGATACTCGTCCTTGAGCAC 59.314 50.000 0.00 0.00 39.68 4.40
39 40 2.423892 GAGATACTCGTCCTTGAGCACA 59.576 50.000 0.00 0.00 39.68 4.57
40 41 2.164624 AGATACTCGTCCTTGAGCACAC 59.835 50.000 0.00 0.00 39.68 3.82
41 42 1.617322 TACTCGTCCTTGAGCACACT 58.383 50.000 0.00 0.00 39.68 3.55
42 43 0.753262 ACTCGTCCTTGAGCACACTT 59.247 50.000 0.00 0.00 39.68 3.16
43 44 1.139058 ACTCGTCCTTGAGCACACTTT 59.861 47.619 0.00 0.00 39.68 2.66
44 45 2.213499 CTCGTCCTTGAGCACACTTTT 58.787 47.619 0.00 0.00 0.00 2.27
45 46 2.210116 TCGTCCTTGAGCACACTTTTC 58.790 47.619 0.00 0.00 0.00 2.29
46 47 2.158957 TCGTCCTTGAGCACACTTTTCT 60.159 45.455 0.00 0.00 0.00 2.52
49 50 4.354587 GTCCTTGAGCACACTTTTCTTTG 58.645 43.478 0.00 0.00 0.00 2.77
50 51 4.096382 GTCCTTGAGCACACTTTTCTTTGA 59.904 41.667 0.00 0.00 0.00 2.69
51 52 4.096382 TCCTTGAGCACACTTTTCTTTGAC 59.904 41.667 0.00 0.00 0.00 3.18
52 53 4.142403 CCTTGAGCACACTTTTCTTTGACA 60.142 41.667 0.00 0.00 0.00 3.58
53 54 5.384063 TTGAGCACACTTTTCTTTGACAA 57.616 34.783 0.00 0.00 0.00 3.18
54 55 5.384063 TGAGCACACTTTTCTTTGACAAA 57.616 34.783 0.00 0.00 0.00 2.83
55 56 5.777802 TGAGCACACTTTTCTTTGACAAAA 58.222 33.333 1.62 0.00 0.00 2.44
86 87 3.583526 GGAAACCCCTACTCTGAGTCTTT 59.416 47.826 14.62 5.49 0.00 2.52
87 88 4.041815 GGAAACCCCTACTCTGAGTCTTTT 59.958 45.833 14.62 7.51 0.00 2.27
89 90 4.893829 ACCCCTACTCTGAGTCTTTTTC 57.106 45.455 14.62 0.00 0.00 2.29
90 91 4.232091 ACCCCTACTCTGAGTCTTTTTCA 58.768 43.478 14.62 0.00 0.00 2.69
91 92 4.846940 ACCCCTACTCTGAGTCTTTTTCAT 59.153 41.667 14.62 0.00 0.00 2.57
92 93 5.310857 ACCCCTACTCTGAGTCTTTTTCATT 59.689 40.000 14.62 0.00 0.00 2.57
93 94 6.183361 ACCCCTACTCTGAGTCTTTTTCATTT 60.183 38.462 14.62 0.00 0.00 2.32
94 95 7.017254 ACCCCTACTCTGAGTCTTTTTCATTTA 59.983 37.037 14.62 0.00 0.00 1.40
123 124 5.076873 ACTAGTGGCAATGTAAAATGGTGT 58.923 37.500 0.00 0.00 0.00 4.16
124 125 6.242396 ACTAGTGGCAATGTAAAATGGTGTA 58.758 36.000 0.00 0.00 0.00 2.90
125 126 6.717540 ACTAGTGGCAATGTAAAATGGTGTAA 59.282 34.615 0.00 0.00 0.00 2.41
126 127 5.778862 AGTGGCAATGTAAAATGGTGTAAC 58.221 37.500 0.00 0.00 0.00 2.50
127 128 5.303078 AGTGGCAATGTAAAATGGTGTAACA 59.697 36.000 0.00 0.00 39.98 2.41
128 129 5.404066 GTGGCAATGTAAAATGGTGTAACAC 59.596 40.000 0.00 0.00 39.98 3.32
129 130 5.069119 TGGCAATGTAAAATGGTGTAACACA 59.931 36.000 0.00 0.00 39.98 3.72
130 131 5.986135 GGCAATGTAAAATGGTGTAACACAA 59.014 36.000 0.00 0.00 39.98 3.33
131 132 6.480320 GGCAATGTAAAATGGTGTAACACAAA 59.520 34.615 0.00 0.00 39.98 2.83
132 133 7.307101 GGCAATGTAAAATGGTGTAACACAAAG 60.307 37.037 0.00 0.00 39.98 2.77
133 134 7.436673 GCAATGTAAAATGGTGTAACACAAAGA 59.563 33.333 0.00 0.00 39.98 2.52
134 135 8.967218 CAATGTAAAATGGTGTAACACAAAGAG 58.033 33.333 0.00 0.00 39.98 2.85
135 136 6.500041 TGTAAAATGGTGTAACACAAAGAGC 58.500 36.000 0.00 0.00 39.98 4.09
136 137 5.590530 AAAATGGTGTAACACAAAGAGCA 57.409 34.783 0.00 0.00 39.98 4.26
137 138 5.789643 AAATGGTGTAACACAAAGAGCAT 57.210 34.783 0.00 0.00 39.98 3.79
138 139 4.771590 ATGGTGTAACACAAAGAGCATG 57.228 40.909 0.00 0.00 39.98 4.06
139 140 2.293122 TGGTGTAACACAAAGAGCATGC 59.707 45.455 10.51 10.51 39.98 4.06
140 141 2.351738 GGTGTAACACAAAGAGCATGCC 60.352 50.000 15.66 6.03 39.98 4.40
141 142 1.885887 TGTAACACAAAGAGCATGCCC 59.114 47.619 15.66 1.16 0.00 5.36
142 143 2.162681 GTAACACAAAGAGCATGCCCT 58.837 47.619 15.66 4.47 0.00 5.19
143 144 1.708341 AACACAAAGAGCATGCCCTT 58.292 45.000 15.66 12.16 0.00 3.95
144 145 2.584835 ACACAAAGAGCATGCCCTTA 57.415 45.000 15.42 0.00 0.00 2.69
145 146 2.440409 ACACAAAGAGCATGCCCTTAG 58.560 47.619 15.42 10.58 0.00 2.18
146 147 2.224867 ACACAAAGAGCATGCCCTTAGT 60.225 45.455 15.42 11.19 0.00 2.24
147 148 2.163010 CACAAAGAGCATGCCCTTAGTG 59.837 50.000 15.42 12.88 0.00 2.74
150 151 0.254178 AGAGCATGCCCTTAGTGGTG 59.746 55.000 15.66 0.00 0.00 4.17
151 152 0.749454 GAGCATGCCCTTAGTGGTGG 60.749 60.000 15.66 0.00 0.00 4.61
152 153 1.754234 GCATGCCCTTAGTGGTGGG 60.754 63.158 6.36 0.00 46.00 4.61
153 154 1.998530 CATGCCCTTAGTGGTGGGA 59.001 57.895 1.75 0.00 46.15 4.37
154 155 0.394352 CATGCCCTTAGTGGTGGGAC 60.394 60.000 1.75 0.00 46.15 4.46
155 156 1.571773 ATGCCCTTAGTGGTGGGACC 61.572 60.000 1.75 0.00 46.15 4.46
189 190 7.979115 TTTACACTTCACAACATAAGTTTGC 57.021 32.000 0.00 0.00 35.28 3.68
190 191 5.574891 ACACTTCACAACATAAGTTTGCA 57.425 34.783 0.00 0.00 35.28 4.08
191 192 5.960113 ACACTTCACAACATAAGTTTGCAA 58.040 33.333 0.00 0.00 35.28 4.08
192 193 6.035843 ACACTTCACAACATAAGTTTGCAAG 58.964 36.000 0.00 0.00 35.28 4.01
195 196 4.609947 TCACAACATAAGTTTGCAAGCTG 58.390 39.130 17.08 7.95 35.28 4.24
197 198 5.298026 TCACAACATAAGTTTGCAAGCTGTA 59.702 36.000 17.08 11.18 35.28 2.74
199 200 5.299279 ACAACATAAGTTTGCAAGCTGTAGT 59.701 36.000 17.08 11.92 35.28 2.73
200 201 6.183360 ACAACATAAGTTTGCAAGCTGTAGTT 60.183 34.615 17.08 16.59 35.28 2.24
201 202 6.391227 ACATAAGTTTGCAAGCTGTAGTTT 57.609 33.333 17.08 2.38 0.00 2.66
203 204 7.264947 ACATAAGTTTGCAAGCTGTAGTTTTT 58.735 30.769 17.08 0.89 0.00 1.94
232 233 8.432110 TTGCTTTTCTTTTTATTGGAAAGTCC 57.568 30.769 0.00 0.00 35.95 3.85
234 235 7.926018 TGCTTTTCTTTTTATTGGAAAGTCCTC 59.074 33.333 0.00 0.00 37.46 3.71
238 239 7.900782 TCTTTTTATTGGAAAGTCCTCGTAG 57.099 36.000 0.00 0.00 37.46 3.51
239 240 7.673180 TCTTTTTATTGGAAAGTCCTCGTAGA 58.327 34.615 0.00 0.00 37.46 2.59
240 241 7.817962 TCTTTTTATTGGAAAGTCCTCGTAGAG 59.182 37.037 0.00 0.00 42.91 2.43
241 242 7.413109 CTTTTTATTGGAAAGTCCTCGTAGAGC 60.413 40.741 0.00 0.00 39.87 4.09
251 252 3.588742 TCGTAGAGCATCAGTGGGA 57.411 52.632 0.00 0.00 37.82 4.37
253 254 2.388735 TCGTAGAGCATCAGTGGGATT 58.611 47.619 0.00 0.00 37.82 3.01
254 255 2.766263 TCGTAGAGCATCAGTGGGATTT 59.234 45.455 0.00 0.00 37.82 2.17
256 257 3.557595 CGTAGAGCATCAGTGGGATTTTC 59.442 47.826 0.00 0.00 37.82 2.29
258 259 5.451937 CGTAGAGCATCAGTGGGATTTTCTA 60.452 44.000 0.00 0.00 37.82 2.10
259 260 5.643421 AGAGCATCAGTGGGATTTTCTAT 57.357 39.130 0.00 0.00 37.82 1.98
262 263 5.136105 AGCATCAGTGGGATTTTCTATTCC 58.864 41.667 0.00 0.00 32.57 3.01
263 264 4.023707 GCATCAGTGGGATTTTCTATTCCG 60.024 45.833 0.00 0.00 32.57 4.30
264 265 4.837093 TCAGTGGGATTTTCTATTCCGT 57.163 40.909 0.00 0.00 32.48 4.69
265 266 4.513442 TCAGTGGGATTTTCTATTCCGTG 58.487 43.478 0.00 0.00 32.48 4.94
266 267 3.065371 CAGTGGGATTTTCTATTCCGTGC 59.935 47.826 0.00 0.00 32.48 5.34
267 268 2.031683 GTGGGATTTTCTATTCCGTGCG 59.968 50.000 0.00 0.00 32.48 5.34
270 271 2.031683 GGATTTTCTATTCCGTGCGTGG 59.968 50.000 0.00 0.00 0.00 4.94
272 273 1.022451 TTTCTATTCCGTGCGTGGGC 61.022 55.000 0.00 0.00 40.52 5.36
282 283 3.612517 TGCGTGGGCATCATAGATC 57.387 52.632 0.00 0.00 46.21 2.75
285 286 1.016130 CGTGGGCATCATAGATCGGC 61.016 60.000 0.00 0.00 0.00 5.54
286 287 0.674895 GTGGGCATCATAGATCGGCC 60.675 60.000 0.00 0.00 44.05 6.13
287 288 0.837691 TGGGCATCATAGATCGGCCT 60.838 55.000 0.00 0.00 44.11 5.19
288 289 1.195115 GGGCATCATAGATCGGCCTA 58.805 55.000 0.00 0.00 44.04 3.93
289 290 1.765314 GGGCATCATAGATCGGCCTAT 59.235 52.381 0.00 0.00 44.04 2.57
291 292 3.201290 GGCATCATAGATCGGCCTATTG 58.799 50.000 0.00 0.00 41.39 1.90
292 293 3.369892 GGCATCATAGATCGGCCTATTGT 60.370 47.826 0.00 0.00 41.39 2.71
294 295 4.331168 GCATCATAGATCGGCCTATTGTTC 59.669 45.833 0.00 0.00 0.00 3.18
297 298 6.174720 TCATAGATCGGCCTATTGTTCTTT 57.825 37.500 0.00 0.00 0.00 2.52
298 299 6.223852 TCATAGATCGGCCTATTGTTCTTTC 58.776 40.000 0.00 0.00 0.00 2.62
299 300 4.762289 AGATCGGCCTATTGTTCTTTCT 57.238 40.909 0.00 0.00 0.00 2.52
300 301 4.698575 AGATCGGCCTATTGTTCTTTCTC 58.301 43.478 0.00 0.00 0.00 2.87
301 302 3.261981 TCGGCCTATTGTTCTTTCTCC 57.738 47.619 0.00 0.00 0.00 3.71
303 304 2.355716 CGGCCTATTGTTCTTTCTCCCA 60.356 50.000 0.00 0.00 0.00 4.37
305 306 3.885901 GGCCTATTGTTCTTTCTCCCATC 59.114 47.826 0.00 0.00 0.00 3.51
306 307 3.561725 GCCTATTGTTCTTTCTCCCATCG 59.438 47.826 0.00 0.00 0.00 3.84
308 309 3.721087 ATTGTTCTTTCTCCCATCGGT 57.279 42.857 0.00 0.00 0.00 4.69
311 312 3.827722 TGTTCTTTCTCCCATCGGTTTT 58.172 40.909 0.00 0.00 0.00 2.43
312 313 3.568007 TGTTCTTTCTCCCATCGGTTTTG 59.432 43.478 0.00 0.00 0.00 2.44
313 314 2.790433 TCTTTCTCCCATCGGTTTTGG 58.210 47.619 0.00 0.00 0.00 3.28
320 321 1.627864 CCATCGGTTTTGGGAAGGTT 58.372 50.000 0.00 0.00 0.00 3.50
321 322 1.967779 CCATCGGTTTTGGGAAGGTTT 59.032 47.619 0.00 0.00 0.00 3.27
323 324 0.747852 TCGGTTTTGGGAAGGTTTGC 59.252 50.000 0.00 0.00 0.00 3.68
325 326 1.138069 CGGTTTTGGGAAGGTTTGCTT 59.862 47.619 0.00 0.00 0.00 3.91
326 327 2.801699 CGGTTTTGGGAAGGTTTGCTTC 60.802 50.000 0.00 0.00 0.00 3.86
327 328 2.434336 GGTTTTGGGAAGGTTTGCTTCT 59.566 45.455 0.00 0.00 0.00 2.85
328 329 3.639561 GGTTTTGGGAAGGTTTGCTTCTA 59.360 43.478 0.00 0.00 0.00 2.10
329 330 4.262036 GGTTTTGGGAAGGTTTGCTTCTAG 60.262 45.833 0.00 0.00 0.00 2.43
330 331 4.447138 TTTGGGAAGGTTTGCTTCTAGA 57.553 40.909 0.00 0.00 0.00 2.43
331 332 4.447138 TTGGGAAGGTTTGCTTCTAGAA 57.553 40.909 4.81 4.81 0.00 2.10
332 333 4.021102 TGGGAAGGTTTGCTTCTAGAAG 57.979 45.455 25.42 25.42 41.24 2.85
344 345 4.045636 CTTCTAGAAGCTTCTCTCCAGC 57.954 50.000 31.67 0.27 38.70 4.85
345 346 2.020720 TCTAGAAGCTTCTCTCCAGCG 58.979 52.381 31.67 12.52 42.55 5.18
346 347 2.020720 CTAGAAGCTTCTCTCCAGCGA 58.979 52.381 31.67 11.43 42.55 4.93
347 348 1.261480 AGAAGCTTCTCTCCAGCGAA 58.739 50.000 23.49 0.00 42.55 4.70
348 349 1.620819 AGAAGCTTCTCTCCAGCGAAA 59.379 47.619 23.49 0.00 42.55 3.46
349 350 2.037772 AGAAGCTTCTCTCCAGCGAAAA 59.962 45.455 23.49 0.00 42.55 2.29
350 351 2.777832 AGCTTCTCTCCAGCGAAAAT 57.222 45.000 0.00 0.00 42.55 1.82
351 352 2.626840 AGCTTCTCTCCAGCGAAAATC 58.373 47.619 0.00 0.00 42.55 2.17
353 354 3.006247 GCTTCTCTCCAGCGAAAATCTT 58.994 45.455 0.00 0.00 0.00 2.40
354 355 3.438434 GCTTCTCTCCAGCGAAAATCTTT 59.562 43.478 0.00 0.00 0.00 2.52
355 356 4.083057 GCTTCTCTCCAGCGAAAATCTTTT 60.083 41.667 0.00 0.00 0.00 2.27
356 357 5.563671 GCTTCTCTCCAGCGAAAATCTTTTT 60.564 40.000 0.00 0.00 0.00 1.94
383 384 9.787532 TCGATTTTTCTTTGCTGATTTAATAGG 57.212 29.630 0.00 0.00 0.00 2.57
384 385 9.573133 CGATTTTTCTTTGCTGATTTAATAGGT 57.427 29.630 0.00 0.00 0.00 3.08
390 391 8.281212 TCTTTGCTGATTTAATAGGTTTCTCC 57.719 34.615 0.00 0.00 0.00 3.71
391 392 7.339466 TCTTTGCTGATTTAATAGGTTTCTCCC 59.661 37.037 0.00 0.00 36.75 4.30
393 394 6.731467 TGCTGATTTAATAGGTTTCTCCCTT 58.269 36.000 0.00 0.00 35.97 3.95
394 395 7.182060 TGCTGATTTAATAGGTTTCTCCCTTT 58.818 34.615 0.00 0.00 35.97 3.11
395 396 7.673926 TGCTGATTTAATAGGTTTCTCCCTTTT 59.326 33.333 0.00 0.00 35.97 2.27
526 527 9.547753 TTTTTCATATTCGGAAATTGGTTTTGA 57.452 25.926 0.00 0.00 34.50 2.69
527 528 9.547753 TTTTCATATTCGGAAATTGGTTTTGAA 57.452 25.926 0.00 0.00 34.50 2.69
530 531 7.978975 TCATATTCGGAAATTGGTTTTGAATCC 59.021 33.333 0.00 0.00 35.80 3.01
532 533 5.736951 TCGGAAATTGGTTTTGAATCCAT 57.263 34.783 0.00 0.00 33.50 3.41
535 536 6.209589 TCGGAAATTGGTTTTGAATCCATACA 59.790 34.615 0.00 0.00 33.50 2.29
537 538 7.158021 GGAAATTGGTTTTGAATCCATACACA 58.842 34.615 0.00 0.00 33.50 3.72
538 539 7.823799 GGAAATTGGTTTTGAATCCATACACAT 59.176 33.333 0.00 0.00 33.50 3.21
539 540 9.868277 GAAATTGGTTTTGAATCCATACACATA 57.132 29.630 0.00 0.00 33.50 2.29
592 593 9.871238 ATTCATGAAGATTTTTGAGAATTCAGG 57.129 29.630 14.54 0.00 34.15 3.86
593 594 8.640063 TCATGAAGATTTTTGAGAATTCAGGA 57.360 30.769 8.44 0.00 35.76 3.86
594 595 9.251440 TCATGAAGATTTTTGAGAATTCAGGAT 57.749 29.630 8.44 0.00 33.93 3.24
668 669 8.317776 TCCAGGAATATTTTTAAATTCAGGGG 57.682 34.615 0.00 0.00 34.44 4.79
669 670 7.346960 TCCAGGAATATTTTTAAATTCAGGGGG 59.653 37.037 0.00 0.00 34.44 5.40
670 671 7.346960 CCAGGAATATTTTTAAATTCAGGGGGA 59.653 37.037 0.00 0.00 34.44 4.81
672 673 9.345254 AGGAATATTTTTAAATTCAGGGGGAAA 57.655 29.630 0.00 0.00 39.39 3.13
678 679 8.684386 TTTTTAAATTCAGGGGGAAAACAATC 57.316 30.769 0.00 0.00 39.39 2.67
680 681 7.625498 TTAAATTCAGGGGGAAAACAATCTT 57.375 32.000 0.00 0.00 39.39 2.40
681 682 8.728596 TTAAATTCAGGGGGAAAACAATCTTA 57.271 30.769 0.00 0.00 39.39 2.10
682 683 7.625498 AAATTCAGGGGGAAAACAATCTTAA 57.375 32.000 0.00 0.00 39.39 1.85
683 684 7.625498 AATTCAGGGGGAAAACAATCTTAAA 57.375 32.000 0.00 0.00 39.39 1.52
684 685 7.625498 ATTCAGGGGGAAAACAATCTTAAAA 57.375 32.000 0.00 0.00 39.39 1.52
685 686 6.413783 TCAGGGGGAAAACAATCTTAAAAC 57.586 37.500 0.00 0.00 0.00 2.43
686 687 6.140377 TCAGGGGGAAAACAATCTTAAAACT 58.860 36.000 0.00 0.00 0.00 2.66
687 688 6.613679 TCAGGGGGAAAACAATCTTAAAACTT 59.386 34.615 0.00 0.00 0.00 2.66
688 689 7.126573 TCAGGGGGAAAACAATCTTAAAACTTT 59.873 33.333 0.00 0.00 0.00 2.66
689 690 7.773224 CAGGGGGAAAACAATCTTAAAACTTTT 59.227 33.333 0.00 0.00 0.00 2.27
690 691 7.773224 AGGGGGAAAACAATCTTAAAACTTTTG 59.227 33.333 0.00 0.00 0.00 2.44
691 692 7.012894 GGGGGAAAACAATCTTAAAACTTTTGG 59.987 37.037 0.00 0.00 0.00 3.28
692 693 7.012894 GGGGAAAACAATCTTAAAACTTTTGGG 59.987 37.037 0.00 0.00 0.00 4.12
694 695 7.012894 GGAAAACAATCTTAAAACTTTTGGGGG 59.987 37.037 0.00 0.00 0.00 5.40
696 697 6.169557 ACAATCTTAAAACTTTTGGGGGTC 57.830 37.500 0.00 0.00 0.00 4.46
698 699 3.578978 TCTTAAAACTTTTGGGGGTCCC 58.421 45.455 0.00 0.00 45.71 4.46
710 711 1.202891 GGGGGTCCCGATTATTTCCTG 60.203 57.143 0.48 0.00 36.85 3.86
711 712 1.772453 GGGGTCCCGATTATTTCCTGA 59.228 52.381 0.48 0.00 0.00 3.86
712 713 2.173996 GGGGTCCCGATTATTTCCTGAA 59.826 50.000 0.48 0.00 0.00 3.02
713 714 3.372241 GGGGTCCCGATTATTTCCTGAAA 60.372 47.826 0.48 0.00 34.46 2.69
714 715 4.470602 GGGTCCCGATTATTTCCTGAAAT 58.529 43.478 9.81 9.81 42.95 2.17
715 716 4.893524 GGGTCCCGATTATTTCCTGAAATT 59.106 41.667 10.15 0.00 40.99 1.82
717 718 5.277828 GGTCCCGATTATTTCCTGAAATTCG 60.278 44.000 10.15 13.02 40.99 3.34
719 720 6.037830 GTCCCGATTATTTCCTGAAATTCGAA 59.962 38.462 20.20 0.00 40.59 3.71
720 721 6.600032 TCCCGATTATTTCCTGAAATTCGAAA 59.400 34.615 20.20 7.69 40.59 3.46
723 724 9.301153 CCGATTATTTCCTGAAATTCGAAATTT 57.699 29.630 20.20 3.62 40.59 1.82
729 730 9.996554 ATTTCCTGAAATTCGAAATTTTTAGGT 57.003 25.926 23.63 10.66 37.74 3.08
732 733 7.383843 TCCTGAAATTCGAAATTTTTAGGTTGC 59.616 33.333 23.63 4.73 32.41 4.17
734 735 9.405587 CTGAAATTCGAAATTTTTAGGTTGCTA 57.594 29.630 0.00 0.00 0.00 3.49
737 738 9.535878 AAATTCGAAATTTTTAGGTTGCTAACA 57.464 25.926 0.00 0.00 0.00 2.41
788 789 7.455641 TCACAAACACTTTTAAAAGTCTGGA 57.544 32.000 26.90 18.76 45.65 3.86
789 790 7.887381 TCACAAACACTTTTAAAAGTCTGGAA 58.113 30.769 26.90 14.75 45.65 3.53
790 791 8.361139 TCACAAACACTTTTAAAAGTCTGGAAA 58.639 29.630 26.90 12.91 45.65 3.13
791 792 9.150348 CACAAACACTTTTAAAAGTCTGGAAAT 57.850 29.630 26.90 9.88 45.65 2.17
795 796 9.719355 AACACTTTTAAAAGTCTGGAAATTTGT 57.281 25.926 26.90 16.19 45.65 2.83
796 797 9.719355 ACACTTTTAAAAGTCTGGAAATTTGTT 57.281 25.926 26.90 1.91 45.65 2.83
816 817 9.625747 ATTTGTTTCCAAATTACATGTCCTTTT 57.374 25.926 0.00 0.00 46.61 2.27
817 818 9.454859 TTTGTTTCCAAATTACATGTCCTTTTT 57.545 25.926 0.00 0.00 35.67 1.94
820 821 6.166984 TCCAAATTACATGTCCTTTTTGCA 57.833 33.333 0.00 0.00 0.00 4.08
821 822 6.586344 TCCAAATTACATGTCCTTTTTGCAA 58.414 32.000 0.00 0.00 0.00 4.08
822 823 7.222872 TCCAAATTACATGTCCTTTTTGCAAT 58.777 30.769 0.00 0.00 0.00 3.56
823 824 7.172875 TCCAAATTACATGTCCTTTTTGCAATG 59.827 33.333 0.00 0.00 0.00 2.82
826 827 9.723601 AAATTACATGTCCTTTTTGCAATGTAT 57.276 25.926 0.00 0.00 0.00 2.29
827 828 9.723601 AATTACATGTCCTTTTTGCAATGTATT 57.276 25.926 0.00 0.00 0.00 1.89
828 829 9.723601 ATTACATGTCCTTTTTGCAATGTATTT 57.276 25.926 0.00 0.00 0.00 1.40
831 832 9.553064 ACATGTCCTTTTTGCAATGTATTTTAA 57.447 25.926 0.00 0.00 0.00 1.52
872 873 9.914131 AATAACAAAATCTAGTCAAAAAGAGGC 57.086 29.630 0.00 0.00 0.00 4.70
874 875 6.974965 ACAAAATCTAGTCAAAAAGAGGCTG 58.025 36.000 0.00 0.00 0.00 4.85
875 876 6.015940 ACAAAATCTAGTCAAAAAGAGGCTGG 60.016 38.462 0.00 0.00 0.00 4.85
876 877 3.059352 TCTAGTCAAAAAGAGGCTGGC 57.941 47.619 0.00 0.00 0.00 4.85
877 878 2.371841 TCTAGTCAAAAAGAGGCTGGCA 59.628 45.455 3.38 0.00 0.00 4.92
878 879 2.071778 AGTCAAAAAGAGGCTGGCAA 57.928 45.000 3.38 0.00 0.00 4.52
879 880 2.387757 AGTCAAAAAGAGGCTGGCAAA 58.612 42.857 3.38 0.00 0.00 3.68
880 881 2.765699 AGTCAAAAAGAGGCTGGCAAAA 59.234 40.909 3.38 0.00 0.00 2.44
881 882 2.866156 GTCAAAAAGAGGCTGGCAAAAC 59.134 45.455 3.38 0.00 0.00 2.43
894 895 2.111041 GCAAAACGCCAGCATAGATC 57.889 50.000 0.00 0.00 32.94 2.75
895 896 1.672881 GCAAAACGCCAGCATAGATCT 59.327 47.619 0.00 0.00 32.94 2.75
896 897 2.098117 GCAAAACGCCAGCATAGATCTT 59.902 45.455 0.00 0.00 32.94 2.40
898 899 4.737054 CAAAACGCCAGCATAGATCTTTT 58.263 39.130 0.00 0.00 0.00 2.27
899 900 5.163513 CAAAACGCCAGCATAGATCTTTTT 58.836 37.500 0.00 0.00 0.00 1.94
900 901 4.361451 AACGCCAGCATAGATCTTTTTG 57.639 40.909 0.00 0.00 0.00 2.44
901 902 3.347216 ACGCCAGCATAGATCTTTTTGT 58.653 40.909 0.00 0.00 0.00 2.83
902 903 3.758554 ACGCCAGCATAGATCTTTTTGTT 59.241 39.130 0.00 0.00 0.00 2.83
904 905 5.163513 CGCCAGCATAGATCTTTTTGTTTT 58.836 37.500 0.00 0.00 0.00 2.43
909 910 8.829612 CCAGCATAGATCTTTTTGTTTTTGTTT 58.170 29.630 0.00 0.00 0.00 2.83
922 923 9.899226 TTTTGTTTTTGTTTTTGTATTTGAGGG 57.101 25.926 0.00 0.00 0.00 4.30
924 925 7.168905 TGTTTTTGTTTTTGTATTTGAGGGGT 58.831 30.769 0.00 0.00 0.00 4.95
925 926 8.319146 TGTTTTTGTTTTTGTATTTGAGGGGTA 58.681 29.630 0.00 0.00 0.00 3.69
926 927 8.822855 GTTTTTGTTTTTGTATTTGAGGGGTAG 58.177 33.333 0.00 0.00 0.00 3.18
927 928 7.663043 TTTGTTTTTGTATTTGAGGGGTAGT 57.337 32.000 0.00 0.00 0.00 2.73
929 930 7.989416 TGTTTTTGTATTTGAGGGGTAGTAG 57.011 36.000 0.00 0.00 0.00 2.57
930 931 7.747690 TGTTTTTGTATTTGAGGGGTAGTAGA 58.252 34.615 0.00 0.00 0.00 2.59
932 933 9.239551 GTTTTTGTATTTGAGGGGTAGTAGATT 57.760 33.333 0.00 0.00 0.00 2.40
933 934 9.816787 TTTTTGTATTTGAGGGGTAGTAGATTT 57.183 29.630 0.00 0.00 0.00 2.17
955 956 5.571778 TTTTTCTTTCGAGAAGACTACGC 57.428 39.130 8.83 0.00 0.00 4.42
956 957 3.909776 TTCTTTCGAGAAGACTACGCA 57.090 42.857 8.83 0.00 0.00 5.24
957 958 3.909776 TCTTTCGAGAAGACTACGCAA 57.090 42.857 6.10 0.00 0.00 4.85
958 959 3.562505 TCTTTCGAGAAGACTACGCAAC 58.437 45.455 6.10 0.00 0.00 4.17
959 960 3.004002 TCTTTCGAGAAGACTACGCAACA 59.996 43.478 6.10 0.00 0.00 3.33
961 962 2.929960 TCGAGAAGACTACGCAACAAG 58.070 47.619 0.00 0.00 0.00 3.16
962 963 1.387084 CGAGAAGACTACGCAACAAGC 59.613 52.381 0.00 0.00 40.87 4.01
963 964 2.678324 GAGAAGACTACGCAACAAGCT 58.322 47.619 0.00 0.00 42.61 3.74
965 966 3.839293 AGAAGACTACGCAACAAGCTAG 58.161 45.455 0.00 0.00 42.61 3.42
966 967 3.256136 AGAAGACTACGCAACAAGCTAGT 59.744 43.478 0.00 0.00 42.61 2.57
967 968 4.458295 AGAAGACTACGCAACAAGCTAGTA 59.542 41.667 0.00 0.00 42.61 1.82
968 969 4.358494 AGACTACGCAACAAGCTAGTAG 57.642 45.455 0.00 0.00 40.71 2.57
969 970 3.757493 AGACTACGCAACAAGCTAGTAGT 59.243 43.478 6.31 6.31 46.35 2.73
970 971 4.940046 AGACTACGCAACAAGCTAGTAGTA 59.060 41.667 6.56 2.45 44.84 1.82
971 972 5.064962 AGACTACGCAACAAGCTAGTAGTAG 59.935 44.000 6.56 0.00 44.84 2.57
974 975 5.130292 ACGCAACAAGCTAGTAGTAGAAA 57.870 39.130 8.87 0.00 42.61 2.52
975 976 5.162075 ACGCAACAAGCTAGTAGTAGAAAG 58.838 41.667 8.87 0.00 42.61 2.62
976 977 5.048224 ACGCAACAAGCTAGTAGTAGAAAGA 60.048 40.000 8.87 0.00 42.61 2.52
977 978 5.286558 CGCAACAAGCTAGTAGTAGAAAGAC 59.713 44.000 8.87 0.00 42.61 3.01
978 979 6.157211 GCAACAAGCTAGTAGTAGAAAGACA 58.843 40.000 8.87 0.00 41.15 3.41
979 980 6.309251 GCAACAAGCTAGTAGTAGAAAGACAG 59.691 42.308 8.87 0.00 41.15 3.51
980 981 7.594714 CAACAAGCTAGTAGTAGAAAGACAGA 58.405 38.462 8.87 0.00 0.00 3.41
981 982 7.762588 ACAAGCTAGTAGTAGAAAGACAGAA 57.237 36.000 8.87 0.00 0.00 3.02
982 983 8.179509 ACAAGCTAGTAGTAGAAAGACAGAAA 57.820 34.615 8.87 0.00 0.00 2.52
983 984 8.808092 ACAAGCTAGTAGTAGAAAGACAGAAAT 58.192 33.333 8.87 0.00 0.00 2.17
993 994 8.043710 AGTAGAAAGACAGAAATAAGTGATGGG 58.956 37.037 0.00 0.00 0.00 4.00
995 996 4.510167 AGACAGAAATAAGTGATGGGGG 57.490 45.455 0.00 0.00 0.00 5.40
997 998 2.310538 CAGAAATAAGTGATGGGGGCC 58.689 52.381 0.00 0.00 0.00 5.80
998 999 1.217942 AGAAATAAGTGATGGGGGCCC 59.782 52.381 15.76 15.76 0.00 5.80
1007 1008 3.260888 TGGGGGCCCAATGAACGA 61.261 61.111 26.86 0.00 44.12 3.85
1008 1009 2.440247 GGGGGCCCAATGAACGAG 60.440 66.667 26.86 0.00 35.81 4.18
1009 1010 2.355115 GGGGCCCAATGAACGAGT 59.645 61.111 26.86 0.00 0.00 4.18
1011 1012 0.182775 GGGGCCCAATGAACGAGTAT 59.817 55.000 26.86 0.00 0.00 2.12
1012 1013 1.308998 GGGCCCAATGAACGAGTATG 58.691 55.000 19.95 0.00 0.00 2.39
1013 1014 1.134220 GGGCCCAATGAACGAGTATGA 60.134 52.381 19.95 0.00 0.00 2.15
1014 1015 2.487265 GGGCCCAATGAACGAGTATGAT 60.487 50.000 19.95 0.00 0.00 2.45
1015 1016 3.244422 GGGCCCAATGAACGAGTATGATA 60.244 47.826 19.95 0.00 0.00 2.15
1016 1017 3.997021 GGCCCAATGAACGAGTATGATAG 59.003 47.826 0.00 0.00 0.00 2.08
1017 1018 4.262463 GGCCCAATGAACGAGTATGATAGA 60.262 45.833 0.00 0.00 0.00 1.98
1018 1019 5.297547 GCCCAATGAACGAGTATGATAGAA 58.702 41.667 0.00 0.00 0.00 2.10
1019 1020 5.406780 GCCCAATGAACGAGTATGATAGAAG 59.593 44.000 0.00 0.00 0.00 2.85
1020 1021 6.738731 GCCCAATGAACGAGTATGATAGAAGA 60.739 42.308 0.00 0.00 0.00 2.87
1022 1023 6.865726 CCAATGAACGAGTATGATAGAAGAGG 59.134 42.308 0.00 0.00 0.00 3.69
1024 1025 7.589958 ATGAACGAGTATGATAGAAGAGGTT 57.410 36.000 0.00 0.00 0.00 3.50
1025 1026 7.028926 TGAACGAGTATGATAGAAGAGGTTC 57.971 40.000 0.00 0.00 0.00 3.62
1027 1028 7.991460 TGAACGAGTATGATAGAAGAGGTTCTA 59.009 37.037 0.00 0.00 46.96 2.10
1028 1029 8.749026 AACGAGTATGATAGAAGAGGTTCTAA 57.251 34.615 0.00 0.00 46.22 2.10
1030 1031 9.186837 ACGAGTATGATAGAAGAGGTTCTAAAA 57.813 33.333 0.00 0.00 46.22 1.52
1041 1042 9.457436 AGAAGAGGTTCTAAAAACAAAAGTGTA 57.543 29.630 0.00 0.00 41.54 2.90
1045 1046 9.590088 GAGGTTCTAAAAACAAAAGTGTATACG 57.410 33.333 0.00 0.00 36.80 3.06
1046 1047 8.071967 AGGTTCTAAAAACAAAAGTGTATACGC 58.928 33.333 8.42 8.42 36.80 4.42
1048 1049 7.493743 TCTAAAAACAAAAGTGTATACGCCA 57.506 32.000 12.78 0.00 36.80 5.69
1049 1050 7.577979 TCTAAAAACAAAAGTGTATACGCCAG 58.422 34.615 12.78 3.58 36.80 4.85
1050 1051 3.824414 AACAAAAGTGTATACGCCAGC 57.176 42.857 12.78 0.00 36.80 4.85
1052 1053 1.062002 CAAAAGTGTATACGCCAGCCG 59.938 52.381 12.78 0.00 44.21 5.52
1054 1055 0.102481 AAGTGTATACGCCAGCCGAG 59.898 55.000 12.78 0.00 41.02 4.63
1055 1056 1.035932 AGTGTATACGCCAGCCGAGT 61.036 55.000 12.78 0.00 41.02 4.18
1056 1057 0.594284 GTGTATACGCCAGCCGAGTC 60.594 60.000 5.03 0.00 41.02 3.36
1059 1060 2.946172 TATACGCCAGCCGAGTCCGA 62.946 60.000 0.00 0.00 41.02 4.55
1062 1063 4.500116 GCCAGCCGAGTCCGACTC 62.500 72.222 17.31 17.31 41.71 3.36
1064 1065 4.180946 CAGCCGAGTCCGACTCCG 62.181 72.222 20.57 15.79 42.12 4.63
1068 1069 3.507009 CGAGTCCGACTCCGACCC 61.507 72.222 20.57 0.00 42.12 4.46
1069 1070 3.507009 GAGTCCGACTCCGACCCG 61.507 72.222 16.58 0.00 39.28 5.28
1071 1072 3.507009 GTCCGACTCCGACCCGAG 61.507 72.222 0.00 0.00 38.22 4.63
1072 1073 4.790962 TCCGACTCCGACCCGAGG 62.791 72.222 0.00 0.00 38.22 4.63
1074 1075 3.812019 CGACTCCGACCCGAGGTG 61.812 72.222 0.00 0.00 35.25 4.00
1075 1076 3.450115 GACTCCGACCCGAGGTGG 61.450 72.222 0.00 0.00 35.25 4.61
1087 1088 2.450502 AGGTGGCTCCTGGGTTGT 60.451 61.111 7.43 0.00 46.19 3.32
1088 1089 2.084930 AGGTGGCTCCTGGGTTGTT 61.085 57.895 7.43 0.00 46.19 2.83
1089 1090 1.603739 GGTGGCTCCTGGGTTGTTC 60.604 63.158 0.00 0.00 0.00 3.18
1090 1091 1.966451 GTGGCTCCTGGGTTGTTCG 60.966 63.158 0.00 0.00 0.00 3.95
1091 1092 3.056328 GGCTCCTGGGTTGTTCGC 61.056 66.667 0.00 0.00 0.00 4.70
1092 1093 3.056328 GCTCCTGGGTTGTTCGCC 61.056 66.667 0.00 0.00 0.00 5.54
1093 1094 2.750350 CTCCTGGGTTGTTCGCCT 59.250 61.111 0.00 0.00 0.00 5.52
1094 1095 1.672356 CTCCTGGGTTGTTCGCCTG 60.672 63.158 0.00 0.00 0.00 4.85
1095 1096 2.672996 CCTGGGTTGTTCGCCTGG 60.673 66.667 0.00 0.00 0.00 4.45
1097 1098 1.966451 CTGGGTTGTTCGCCTGGAC 60.966 63.158 0.00 0.00 0.00 4.02
1098 1099 2.112297 GGGTTGTTCGCCTGGACA 59.888 61.111 0.00 0.00 0.00 4.02
1099 1100 1.303317 GGGTTGTTCGCCTGGACAT 60.303 57.895 0.00 0.00 0.00 3.06
1100 1101 0.035820 GGGTTGTTCGCCTGGACATA 60.036 55.000 0.00 0.00 0.00 2.29
1102 1103 2.158871 GGGTTGTTCGCCTGGACATATA 60.159 50.000 0.00 0.00 0.00 0.86
1103 1104 3.496160 GGGTTGTTCGCCTGGACATATAT 60.496 47.826 0.00 0.00 0.00 0.86
1104 1105 4.262721 GGGTTGTTCGCCTGGACATATATA 60.263 45.833 0.00 0.00 0.00 0.86
1106 1107 4.168922 TGTTCGCCTGGACATATATACG 57.831 45.455 0.00 0.00 0.00 3.06
1107 1108 2.921754 GTTCGCCTGGACATATATACGC 59.078 50.000 0.00 0.00 0.00 4.42
1108 1109 1.475280 TCGCCTGGACATATATACGCC 59.525 52.381 0.00 0.00 0.00 5.68
1109 1110 1.203758 CGCCTGGACATATATACGCCA 59.796 52.381 0.00 0.00 0.00 5.69
1110 1111 2.735444 CGCCTGGACATATATACGCCAG 60.735 54.545 15.51 15.51 44.40 4.85
1111 1112 2.893637 CCTGGACATATATACGCCAGC 58.106 52.381 16.45 0.00 43.65 4.85
1112 1113 2.418746 CCTGGACATATATACGCCAGCC 60.419 54.545 16.45 0.00 43.65 4.85
1113 1114 1.553248 TGGACATATATACGCCAGCCC 59.447 52.381 0.00 0.00 0.00 5.19
1114 1115 1.134491 GGACATATATACGCCAGCCCC 60.134 57.143 0.00 0.00 0.00 5.80
1116 1117 0.179084 CATATATACGCCAGCCCCCG 60.179 60.000 0.00 0.00 0.00 5.73
1117 1118 1.968050 ATATATACGCCAGCCCCCGC 61.968 60.000 0.00 0.00 0.00 6.13
1132 1133 4.821589 CGCCGCCTCAACCTCCTC 62.822 72.222 0.00 0.00 0.00 3.71
1133 1134 4.475135 GCCGCCTCAACCTCCTCC 62.475 72.222 0.00 0.00 0.00 4.30
1134 1135 2.685380 CCGCCTCAACCTCCTCCT 60.685 66.667 0.00 0.00 0.00 3.69
1135 1136 2.581354 CGCCTCAACCTCCTCCTG 59.419 66.667 0.00 0.00 0.00 3.86
1137 1138 1.831652 CGCCTCAACCTCCTCCTGTT 61.832 60.000 0.00 0.00 0.00 3.16
1139 1140 1.202940 GCCTCAACCTCCTCCTGTTTT 60.203 52.381 0.00 0.00 0.00 2.43
1143 1144 2.783510 TCAACCTCCTCCTGTTTTCCTT 59.216 45.455 0.00 0.00 0.00 3.36
1144 1145 3.149981 CAACCTCCTCCTGTTTTCCTTC 58.850 50.000 0.00 0.00 0.00 3.46
1145 1146 2.418669 ACCTCCTCCTGTTTTCCTTCA 58.581 47.619 0.00 0.00 0.00 3.02
1146 1147 2.373502 ACCTCCTCCTGTTTTCCTTCAG 59.626 50.000 0.00 0.00 0.00 3.02
1147 1148 2.639839 CCTCCTCCTGTTTTCCTTCAGA 59.360 50.000 0.00 0.00 34.02 3.27
1148 1149 3.558109 CCTCCTCCTGTTTTCCTTCAGAC 60.558 52.174 0.00 0.00 34.02 3.51
1149 1150 2.372172 TCCTCCTGTTTTCCTTCAGACC 59.628 50.000 0.00 0.00 34.02 3.85
1152 1153 2.512056 TCCTGTTTTCCTTCAGACCCAA 59.488 45.455 0.00 0.00 34.02 4.12
1154 1155 2.290641 CTGTTTTCCTTCAGACCCAACG 59.709 50.000 0.00 0.00 34.02 4.10
1155 1156 2.092861 TGTTTTCCTTCAGACCCAACGA 60.093 45.455 0.00 0.00 0.00 3.85
1156 1157 2.543777 TTTCCTTCAGACCCAACGAG 57.456 50.000 0.00 0.00 0.00 4.18
1157 1158 1.712056 TTCCTTCAGACCCAACGAGA 58.288 50.000 0.00 0.00 0.00 4.04
1159 1160 1.203013 TCCTTCAGACCCAACGAGAGA 60.203 52.381 0.00 0.00 0.00 3.10
1160 1161 1.203523 CCTTCAGACCCAACGAGAGAG 59.796 57.143 0.00 0.00 0.00 3.20
1161 1162 2.163509 CTTCAGACCCAACGAGAGAGA 58.836 52.381 0.00 0.00 0.00 3.10
1162 1163 1.827681 TCAGACCCAACGAGAGAGAG 58.172 55.000 0.00 0.00 0.00 3.20
1163 1164 1.351350 TCAGACCCAACGAGAGAGAGA 59.649 52.381 0.00 0.00 0.00 3.10
1164 1165 1.470890 CAGACCCAACGAGAGAGAGAC 59.529 57.143 0.00 0.00 0.00 3.36
1166 1167 1.470890 GACCCAACGAGAGAGAGACAG 59.529 57.143 0.00 0.00 0.00 3.51
1168 1169 1.742831 CCCAACGAGAGAGAGACAGAG 59.257 57.143 0.00 0.00 0.00 3.35
1169 1170 2.616765 CCCAACGAGAGAGAGACAGAGA 60.617 54.545 0.00 0.00 0.00 3.10
1170 1171 3.078097 CCAACGAGAGAGAGACAGAGAA 58.922 50.000 0.00 0.00 0.00 2.87
1172 1173 4.157656 CCAACGAGAGAGAGACAGAGAAAT 59.842 45.833 0.00 0.00 0.00 2.17
1174 1175 3.945285 ACGAGAGAGAGACAGAGAAATCC 59.055 47.826 0.00 0.00 0.00 3.01
1175 1176 3.315191 CGAGAGAGAGACAGAGAAATCCC 59.685 52.174 0.00 0.00 0.00 3.85
1176 1177 3.636764 GAGAGAGAGACAGAGAAATCCCC 59.363 52.174 0.00 0.00 0.00 4.81
1177 1178 3.012274 AGAGAGAGACAGAGAAATCCCCA 59.988 47.826 0.00 0.00 0.00 4.96
1178 1179 3.772025 GAGAGAGACAGAGAAATCCCCAA 59.228 47.826 0.00 0.00 0.00 4.12
1180 1181 5.533112 AGAGAGACAGAGAAATCCCCAATA 58.467 41.667 0.00 0.00 0.00 1.90
1216 5700 2.737376 GTCGTTCACCGTCAGGGC 60.737 66.667 0.00 0.00 43.47 5.19
1248 5758 2.279784 CCGGAGGCTGCGATCTTC 60.280 66.667 30.40 0.00 46.14 2.87
1249 5759 2.496341 CGGAGGCTGCGATCTTCA 59.504 61.111 24.84 0.00 30.86 3.02
1250 5760 1.153568 CGGAGGCTGCGATCTTCAA 60.154 57.895 24.84 0.00 30.86 2.69
1251 5761 1.150567 CGGAGGCTGCGATCTTCAAG 61.151 60.000 24.84 0.00 30.86 3.02
1252 5762 0.813210 GGAGGCTGCGATCTTCAAGG 60.813 60.000 0.00 0.00 0.00 3.61
1253 5763 1.435408 GAGGCTGCGATCTTCAAGGC 61.435 60.000 0.00 0.00 0.00 4.35
1254 5764 2.476320 GGCTGCGATCTTCAAGGCC 61.476 63.158 0.00 0.00 0.00 5.19
1255 5765 1.746615 GCTGCGATCTTCAAGGCCA 60.747 57.895 5.01 0.00 0.00 5.36
1256 5766 1.308069 GCTGCGATCTTCAAGGCCAA 61.308 55.000 5.01 0.00 0.00 4.52
1257 5767 0.731417 CTGCGATCTTCAAGGCCAAG 59.269 55.000 5.01 0.00 0.00 3.61
1258 5768 0.036732 TGCGATCTTCAAGGCCAAGT 59.963 50.000 5.01 0.00 0.00 3.16
1259 5769 0.729690 GCGATCTTCAAGGCCAAGTC 59.270 55.000 5.01 0.15 0.00 3.01
1260 5770 1.373570 CGATCTTCAAGGCCAAGTCC 58.626 55.000 5.01 0.00 0.00 3.85
1261 5771 1.339055 CGATCTTCAAGGCCAAGTCCA 60.339 52.381 5.01 0.00 0.00 4.02
1262 5772 2.681976 CGATCTTCAAGGCCAAGTCCAT 60.682 50.000 5.01 0.00 0.00 3.41
1263 5773 2.205022 TCTTCAAGGCCAAGTCCATG 57.795 50.000 5.01 0.00 0.00 3.66
1264 5774 1.180029 CTTCAAGGCCAAGTCCATGG 58.820 55.000 4.97 4.97 43.70 3.66
1289 5799 2.361357 CGAGGAGGTGTCGTCCCT 60.361 66.667 5.10 0.00 39.00 4.20
1290 5800 2.408241 CGAGGAGGTGTCGTCCCTC 61.408 68.421 8.62 8.62 46.49 4.30
1294 5804 1.592223 GAGGTGTCGTCCCTCAAGG 59.408 63.158 11.25 0.00 46.46 3.61
1295 5805 2.047179 GGTGTCGTCCCTCAAGGC 60.047 66.667 0.00 0.00 34.51 4.35
1300 5810 1.535444 TCGTCCCTCAAGGCCAAGA 60.535 57.895 5.01 0.19 34.51 3.02
1553 6069 2.028476 CGCGGTGGGATATCTTTATGGA 60.028 50.000 0.00 0.00 0.00 3.41
1554 6070 3.600388 GCGGTGGGATATCTTTATGGAG 58.400 50.000 2.05 0.00 0.00 3.86
1555 6071 3.619979 GCGGTGGGATATCTTTATGGAGG 60.620 52.174 2.05 0.00 0.00 4.30
1583 6099 1.216710 CTCGCTTCCCTGACCAGAC 59.783 63.158 0.00 0.00 0.00 3.51
1602 6136 1.456518 GTACCGGGTCTACCTCCCC 60.457 68.421 6.32 0.00 41.78 4.81
1712 6262 3.281727 TCTGGTGTGAGATTATTGCCC 57.718 47.619 0.00 0.00 0.00 5.36
1715 6265 2.040947 TGGTGTGAGATTATTGCCCACA 59.959 45.455 0.00 0.00 35.65 4.17
1716 6266 3.764885 GTGTGAGATTATTGCCCACAC 57.235 47.619 0.00 0.00 46.75 3.82
1784 6346 1.617357 GCGTCGGAGGGGATAATAAGT 59.383 52.381 0.00 0.00 0.00 2.24
1791 6353 5.190132 TCGGAGGGGATAATAAGTTGAAACA 59.810 40.000 0.00 0.00 0.00 2.83
1795 6357 7.067129 GGAGGGGATAATAAGTTGAAACAAGAC 59.933 40.741 0.00 0.00 0.00 3.01
1809 6371 7.316544 TGAAACAAGACTTCTTTTGTAGGTC 57.683 36.000 0.00 0.00 36.56 3.85
1810 6372 5.986004 AACAAGACTTCTTTTGTAGGTCG 57.014 39.130 0.00 0.00 36.56 4.79
1812 6374 4.809426 ACAAGACTTCTTTTGTAGGTCGTG 59.191 41.667 0.00 0.00 40.35 4.35
1813 6375 3.991367 AGACTTCTTTTGTAGGTCGTGG 58.009 45.455 0.00 0.00 32.86 4.94
1814 6376 3.064931 GACTTCTTTTGTAGGTCGTGGG 58.935 50.000 0.00 0.00 0.00 4.61
1815 6377 2.436911 ACTTCTTTTGTAGGTCGTGGGT 59.563 45.455 0.00 0.00 0.00 4.51
1839 6416 9.581099 GGTTATTTCTTCAGTTCTTTTTGTTCA 57.419 29.630 0.00 0.00 0.00 3.18
1857 6434 3.542712 TCAGCGTTTCTGCTCAAAATC 57.457 42.857 0.00 0.00 45.23 2.17
1858 6435 2.096268 TCAGCGTTTCTGCTCAAAATCG 60.096 45.455 0.00 0.00 45.23 3.34
1859 6436 0.977674 GCGTTTCTGCTCAAAATCGC 59.022 50.000 0.00 0.00 33.01 4.58
1860 6437 1.606606 CGTTTCTGCTCAAAATCGCC 58.393 50.000 0.00 0.00 0.00 5.54
1861 6438 1.606606 GTTTCTGCTCAAAATCGCCG 58.393 50.000 0.00 0.00 0.00 6.46
1862 6439 0.521291 TTTCTGCTCAAAATCGCCGG 59.479 50.000 0.00 0.00 0.00 6.13
1863 6440 1.922135 TTCTGCTCAAAATCGCCGGC 61.922 55.000 19.07 19.07 0.00 6.13
1864 6441 3.723364 CTGCTCAAAATCGCCGGCG 62.723 63.158 42.13 42.13 41.35 6.46
1866 6443 4.536687 CTCAAAATCGCCGGCGCC 62.537 66.667 42.78 19.07 39.59 6.53
1868 6445 4.536687 CAAAATCGCCGGCGCCTC 62.537 66.667 42.78 15.19 39.59 4.70
1869 6446 4.778143 AAAATCGCCGGCGCCTCT 62.778 61.111 42.78 24.18 39.59 3.69
1881 6458 4.774503 GCCTCTGCGCTTGGAGCT 62.775 66.667 9.73 0.00 39.60 4.09
1882 6459 2.895680 CCTCTGCGCTTGGAGCTA 59.104 61.111 9.73 0.00 39.60 3.32
1883 6460 1.445095 CCTCTGCGCTTGGAGCTAT 59.555 57.895 9.73 0.00 39.60 2.97
1885 6462 1.274728 CCTCTGCGCTTGGAGCTATAT 59.725 52.381 9.73 0.00 39.60 0.86
1887 6464 1.001293 TCTGCGCTTGGAGCTATATGG 59.999 52.381 9.73 0.00 39.60 2.74
1889 6466 1.270305 TGCGCTTGGAGCTATATGGTC 60.270 52.381 9.73 0.00 39.60 4.02
1892 6469 2.998670 CGCTTGGAGCTATATGGTCATG 59.001 50.000 0.00 0.00 44.40 3.07
1896 6473 5.997746 GCTTGGAGCTATATGGTCATGTAAA 59.002 40.000 0.00 0.00 44.40 2.01
1899 6476 9.376075 CTTGGAGCTATATGGTCATGTAAATAG 57.624 37.037 0.00 0.00 44.40 1.73
1902 6479 9.944376 GGAGCTATATGGTCATGTAAATAGAAA 57.056 33.333 0.00 0.00 44.40 2.52
1953 6530 4.196971 TGTCTCGATTGGACTCGAATCTA 58.803 43.478 10.89 1.33 46.14 1.98
1980 6557 5.968528 AATTTGGCCGTATTGTCTTTGTA 57.031 34.783 0.00 0.00 0.00 2.41
2006 6583 8.739039 ACTCATTCATTTGATCAAATTTACGGA 58.261 29.630 27.30 18.96 38.84 4.69
2007 6584 8.909708 TCATTCATTTGATCAAATTTACGGAC 57.090 30.769 27.30 0.00 38.84 4.79
2011 6588 8.786826 TCATTTGATCAAATTTACGGACTACT 57.213 30.769 27.30 3.84 38.84 2.57
2012 6589 8.879759 TCATTTGATCAAATTTACGGACTACTC 58.120 33.333 27.30 0.00 38.84 2.59
2013 6590 7.605410 TTTGATCAAATTTACGGACTACTCC 57.395 36.000 16.91 0.00 0.00 3.85
2016 6593 5.334724 TCAAATTTACGGACTACTCCCTC 57.665 43.478 0.00 0.00 31.93 4.30
2017 6594 4.161001 TCAAATTTACGGACTACTCCCTCC 59.839 45.833 0.00 0.00 31.93 4.30
2021 6598 2.105124 CGGACTACTCCCTCCGTTC 58.895 63.158 0.00 0.00 43.79 3.95
2023 6600 0.816373 GGACTACTCCCTCCGTTCAC 59.184 60.000 0.00 0.00 0.00 3.18
2024 6601 1.616456 GGACTACTCCCTCCGTTCACT 60.616 57.143 0.00 0.00 0.00 3.41
2027 6604 2.970640 ACTACTCCCTCCGTTCACTTTT 59.029 45.455 0.00 0.00 0.00 2.27
2028 6605 4.154942 ACTACTCCCTCCGTTCACTTTTA 58.845 43.478 0.00 0.00 0.00 1.52
2029 6606 4.776308 ACTACTCCCTCCGTTCACTTTTAT 59.224 41.667 0.00 0.00 0.00 1.40
2030 6607 5.954150 ACTACTCCCTCCGTTCACTTTTATA 59.046 40.000 0.00 0.00 0.00 0.98
2031 6608 5.750352 ACTCCCTCCGTTCACTTTTATAA 57.250 39.130 0.00 0.00 0.00 0.98
2032 6609 5.731591 ACTCCCTCCGTTCACTTTTATAAG 58.268 41.667 0.00 0.00 37.40 1.73
2033 6610 5.247792 ACTCCCTCCGTTCACTTTTATAAGT 59.752 40.000 0.00 0.00 45.40 2.24
2036 6613 4.032558 CCTCCGTTCACTTTTATAAGTCGC 59.967 45.833 0.00 0.00 42.67 5.19
2039 6616 3.609373 CGTTCACTTTTATAAGTCGCGGA 59.391 43.478 6.13 0.00 42.67 5.54
2040 6617 4.259292 CGTTCACTTTTATAAGTCGCGGAG 60.259 45.833 6.13 0.00 42.67 4.63
2061 6638 5.446073 GGAGCAAAATTTAGTACAGACTCGC 60.446 44.000 0.00 0.00 37.10 5.03
2063 6640 5.348997 AGCAAAATTTAGTACAGACTCGCTC 59.651 40.000 0.00 0.00 37.10 5.03
2064 6641 5.446073 GCAAAATTTAGTACAGACTCGCTCC 60.446 44.000 0.00 0.00 37.10 4.70
2065 6642 3.694535 ATTTAGTACAGACTCGCTCCG 57.305 47.619 0.00 0.00 37.10 4.63
2066 6643 2.105006 TTAGTACAGACTCGCTCCGT 57.895 50.000 0.00 0.00 37.10 4.69
2068 6645 1.060622 GTACAGACTCGCTCCGTCG 59.939 63.158 0.00 0.00 36.53 5.12
2069 6646 2.747822 TACAGACTCGCTCCGTCGC 61.748 63.158 0.00 0.00 36.53 5.19
2101 6678 5.144100 AGTGTGTTGTCCATTTATTCCCAA 58.856 37.500 0.00 0.00 0.00 4.12
2118 6707 1.911766 AATGTCGGTCGGGGACACT 60.912 57.895 6.31 0.00 46.22 3.55
2132 6721 2.188817 GGACACTTCAGTAGGGGACAT 58.811 52.381 0.00 0.00 0.00 3.06
2134 6723 1.909302 ACACTTCAGTAGGGGACATGG 59.091 52.381 0.00 0.00 0.00 3.66
2166 6946 1.380403 CGCATCCCTCTCTCACTCGT 61.380 60.000 0.00 0.00 0.00 4.18
2176 6956 2.087646 CTCTCACTCGTGACTCATCCA 58.912 52.381 0.00 0.00 35.46 3.41
2264 8412 2.203788 TCCTCCCTCGCCTGTGTT 60.204 61.111 0.00 0.00 0.00 3.32
2268 8417 4.641645 CCCTCGCCTGTGTTGCCA 62.642 66.667 0.00 0.00 0.00 4.92
2270 8419 3.716006 CTCGCCTGTGTTGCCACG 61.716 66.667 0.00 0.00 44.92 4.94
2274 8423 4.954970 CCTGTGTTGCCACGCCCT 62.955 66.667 0.00 0.00 44.92 5.19
2275 8424 2.906897 CTGTGTTGCCACGCCCTT 60.907 61.111 0.00 0.00 44.92 3.95
2372 8523 0.820871 GCTCTCCGATCTTGAGTGGT 59.179 55.000 8.46 0.00 0.00 4.16
2386 8537 0.767375 AGTGGTGGTGCTCAATCTGT 59.233 50.000 0.00 0.00 0.00 3.41
2399 8550 1.199327 CAATCTGTGGAGTTGCTGCTG 59.801 52.381 0.00 0.00 0.00 4.41
2484 9127 5.716228 TGAAGATGTTGGAAATAAGCCATGT 59.284 36.000 0.00 0.00 34.90 3.21
2489 9132 0.307760 GGAAATAAGCCATGTCGCGG 59.692 55.000 6.13 0.00 0.00 6.46
2560 9666 4.328440 GCGCATTGTCTAGGCATTATCTAG 59.672 45.833 0.30 0.00 36.46 2.43
2606 10359 3.699038 AGTGTCTGGCTAGAATCTGAGTC 59.301 47.826 0.00 0.00 34.01 3.36
2628 10395 1.947146 GTGCGTGCGTCAGTGTGTA 60.947 57.895 0.00 0.00 0.00 2.90
2629 10396 1.947146 TGCGTGCGTCAGTGTGTAC 60.947 57.895 0.00 0.00 0.00 2.90
2634 10401 0.676736 TGCGTCAGTGTGTACATGGA 59.323 50.000 0.00 0.00 0.00 3.41
2656 10423 2.181954 TGCATGTGTGTGTGCATCTA 57.818 45.000 0.00 0.00 45.60 1.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 9.862371 GAGTATCTCTCTCTCTTCTCTACTATG 57.138 40.741 0.00 0.00 39.86 2.23
1 2 8.740906 CGAGTATCTCTCTCTCTTCTCTACTAT 58.259 40.741 0.00 0.00 40.75 2.12
2 3 7.722728 ACGAGTATCTCTCTCTCTTCTCTACTA 59.277 40.741 0.00 0.00 40.75 1.82
3 4 6.550108 ACGAGTATCTCTCTCTCTTCTCTACT 59.450 42.308 0.00 0.00 40.75 2.57
4 5 6.746120 ACGAGTATCTCTCTCTCTTCTCTAC 58.254 44.000 0.00 0.00 40.75 2.59
5 6 6.015688 GGACGAGTATCTCTCTCTCTTCTCTA 60.016 46.154 0.00 0.00 40.75 2.43
6 7 5.221461 GGACGAGTATCTCTCTCTCTTCTCT 60.221 48.000 0.00 0.00 40.75 3.10
7 8 4.989168 GGACGAGTATCTCTCTCTCTTCTC 59.011 50.000 0.00 0.00 40.75 2.87
8 9 4.654262 AGGACGAGTATCTCTCTCTCTTCT 59.346 45.833 0.00 0.00 40.75 2.85
9 10 4.957296 AGGACGAGTATCTCTCTCTCTTC 58.043 47.826 0.00 0.00 40.75 2.87
11 12 4.407621 TCAAGGACGAGTATCTCTCTCTCT 59.592 45.833 0.00 0.00 40.75 3.10
12 13 4.699637 TCAAGGACGAGTATCTCTCTCTC 58.300 47.826 0.00 0.00 40.75 3.20
13 14 4.703897 CTCAAGGACGAGTATCTCTCTCT 58.296 47.826 0.00 0.00 40.75 3.10
14 15 3.250040 GCTCAAGGACGAGTATCTCTCTC 59.750 52.174 0.00 0.00 40.75 3.20
17 18 2.685897 GTGCTCAAGGACGAGTATCTCT 59.314 50.000 0.00 0.00 35.33 3.10
18 19 2.423892 TGTGCTCAAGGACGAGTATCTC 59.576 50.000 0.00 0.00 39.39 2.75
19 20 2.164624 GTGTGCTCAAGGACGAGTATCT 59.835 50.000 0.00 0.00 39.39 1.98
20 21 2.164624 AGTGTGCTCAAGGACGAGTATC 59.835 50.000 0.00 0.00 39.39 2.24
21 22 2.171840 AGTGTGCTCAAGGACGAGTAT 58.828 47.619 0.00 0.00 39.39 2.12
22 23 1.617322 AGTGTGCTCAAGGACGAGTA 58.383 50.000 0.00 0.00 39.39 2.59
24 25 1.871080 AAAGTGTGCTCAAGGACGAG 58.129 50.000 0.00 0.00 39.39 4.18
25 26 2.158957 AGAAAAGTGTGCTCAAGGACGA 60.159 45.455 0.00 0.00 39.39 4.20
26 27 2.213499 AGAAAAGTGTGCTCAAGGACG 58.787 47.619 0.00 0.00 39.39 4.79
27 28 4.096382 TCAAAGAAAAGTGTGCTCAAGGAC 59.904 41.667 0.00 0.00 36.87 3.85
28 29 4.096382 GTCAAAGAAAAGTGTGCTCAAGGA 59.904 41.667 0.00 0.00 0.00 3.36
29 30 4.142403 TGTCAAAGAAAAGTGTGCTCAAGG 60.142 41.667 0.00 0.00 0.00 3.61
30 31 4.985413 TGTCAAAGAAAAGTGTGCTCAAG 58.015 39.130 0.00 0.00 0.00 3.02
31 32 5.384063 TTGTCAAAGAAAAGTGTGCTCAA 57.616 34.783 0.00 0.00 0.00 3.02
33 34 6.704512 TTTTTGTCAAAGAAAAGTGTGCTC 57.295 33.333 0.00 0.00 0.00 4.26
66 67 5.132144 TGAAAAAGACTCAGAGTAGGGGTTT 59.868 40.000 2.00 0.38 0.00 3.27
68 69 4.232091 TGAAAAAGACTCAGAGTAGGGGT 58.768 43.478 2.00 0.00 0.00 4.95
69 70 4.891992 TGAAAAAGACTCAGAGTAGGGG 57.108 45.455 2.00 0.00 0.00 4.79
96 97 8.250332 CACCATTTTACATTGCCACTAGTAATT 58.750 33.333 0.00 0.00 0.00 1.40
97 98 7.396055 ACACCATTTTACATTGCCACTAGTAAT 59.604 33.333 0.00 0.00 0.00 1.89
98 99 6.717540 ACACCATTTTACATTGCCACTAGTAA 59.282 34.615 0.00 0.00 0.00 2.24
100 101 5.076873 ACACCATTTTACATTGCCACTAGT 58.923 37.500 0.00 0.00 0.00 2.57
103 104 5.303078 TGTTACACCATTTTACATTGCCACT 59.697 36.000 0.00 0.00 0.00 4.00
104 105 5.404066 GTGTTACACCATTTTACATTGCCAC 59.596 40.000 3.79 0.00 0.00 5.01
105 106 5.069119 TGTGTTACACCATTTTACATTGCCA 59.931 36.000 13.29 0.00 32.73 4.92
106 107 5.533482 TGTGTTACACCATTTTACATTGCC 58.467 37.500 13.29 0.00 32.73 4.52
107 108 7.436673 TCTTTGTGTTACACCATTTTACATTGC 59.563 33.333 13.29 0.00 32.73 3.56
108 109 8.864069 TCTTTGTGTTACACCATTTTACATTG 57.136 30.769 13.29 0.00 32.73 2.82
109 110 7.651704 GCTCTTTGTGTTACACCATTTTACATT 59.348 33.333 13.29 0.00 32.73 2.71
110 111 7.145323 GCTCTTTGTGTTACACCATTTTACAT 58.855 34.615 13.29 0.00 32.73 2.29
111 112 6.095580 TGCTCTTTGTGTTACACCATTTTACA 59.904 34.615 13.29 0.99 32.73 2.41
112 113 6.500041 TGCTCTTTGTGTTACACCATTTTAC 58.500 36.000 13.29 0.00 32.73 2.01
113 114 6.701145 TGCTCTTTGTGTTACACCATTTTA 57.299 33.333 13.29 0.00 32.73 1.52
114 115 5.590530 TGCTCTTTGTGTTACACCATTTT 57.409 34.783 13.29 0.00 32.73 1.82
115 116 5.531634 CATGCTCTTTGTGTTACACCATTT 58.468 37.500 13.29 0.00 32.73 2.32
116 117 4.559300 GCATGCTCTTTGTGTTACACCATT 60.559 41.667 11.37 0.00 32.73 3.16
117 118 3.057315 GCATGCTCTTTGTGTTACACCAT 60.057 43.478 11.37 5.06 32.73 3.55
118 119 2.293122 GCATGCTCTTTGTGTTACACCA 59.707 45.455 11.37 0.00 32.73 4.17
119 120 2.351738 GGCATGCTCTTTGTGTTACACC 60.352 50.000 18.92 0.00 32.73 4.16
123 124 2.584835 AGGGCATGCTCTTTGTGTTA 57.415 45.000 16.33 0.00 0.00 2.41
124 125 1.708341 AAGGGCATGCTCTTTGTGTT 58.292 45.000 27.39 3.84 31.79 3.32
125 126 2.224867 ACTAAGGGCATGCTCTTTGTGT 60.225 45.455 36.03 27.78 40.06 3.72
126 127 2.440409 ACTAAGGGCATGCTCTTTGTG 58.560 47.619 36.03 27.25 40.06 3.33
127 128 2.440409 CACTAAGGGCATGCTCTTTGT 58.560 47.619 36.28 34.42 41.70 2.83
128 129 1.747355 CCACTAAGGGCATGCTCTTTG 59.253 52.381 36.28 33.75 37.92 2.77
129 130 1.355720 ACCACTAAGGGCATGCTCTTT 59.644 47.619 36.28 18.34 43.89 2.52
130 131 0.995024 ACCACTAAGGGCATGCTCTT 59.005 50.000 33.94 33.94 43.89 2.85
131 132 0.254178 CACCACTAAGGGCATGCTCT 59.746 55.000 16.33 16.33 43.89 4.09
132 133 0.749454 CCACCACTAAGGGCATGCTC 60.749 60.000 18.92 15.06 43.89 4.26
133 134 1.304282 CCACCACTAAGGGCATGCT 59.696 57.895 18.92 0.00 43.89 3.79
134 135 1.754234 CCCACCACTAAGGGCATGC 60.754 63.158 9.90 9.90 43.89 4.06
135 136 0.394352 GTCCCACCACTAAGGGCATG 60.394 60.000 0.00 0.00 45.07 4.06
136 137 1.571773 GGTCCCACCACTAAGGGCAT 61.572 60.000 0.00 0.00 45.07 4.40
137 138 2.228480 GGTCCCACCACTAAGGGCA 61.228 63.158 0.00 0.00 45.07 5.36
138 139 2.228480 TGGTCCCACCACTAAGGGC 61.228 63.158 0.00 0.00 44.79 5.19
139 140 4.243550 TGGTCCCACCACTAAGGG 57.756 61.111 0.00 0.00 44.79 3.95
163 164 8.865001 GCAAACTTATGTTGTGAAGTGTAAAAA 58.135 29.630 0.00 0.00 36.05 1.94
164 165 8.029522 TGCAAACTTATGTTGTGAAGTGTAAAA 58.970 29.630 0.00 0.00 36.05 1.52
165 166 7.539436 TGCAAACTTATGTTGTGAAGTGTAAA 58.461 30.769 0.00 0.00 36.05 2.01
166 167 7.089770 TGCAAACTTATGTTGTGAAGTGTAA 57.910 32.000 0.00 0.00 36.05 2.41
168 169 5.574891 TGCAAACTTATGTTGTGAAGTGT 57.425 34.783 0.00 0.00 36.05 3.55
169 170 5.051508 GCTTGCAAACTTATGTTGTGAAGTG 60.052 40.000 0.00 0.00 36.05 3.16
170 171 5.043248 GCTTGCAAACTTATGTTGTGAAGT 58.957 37.500 0.00 0.00 37.50 3.01
171 172 5.174398 CAGCTTGCAAACTTATGTTGTGAAG 59.826 40.000 0.00 0.05 36.39 3.02
173 174 4.097741 ACAGCTTGCAAACTTATGTTGTGA 59.902 37.500 0.00 0.00 36.39 3.58
174 175 4.362279 ACAGCTTGCAAACTTATGTTGTG 58.638 39.130 0.00 0.00 36.39 3.33
175 176 4.654091 ACAGCTTGCAAACTTATGTTGT 57.346 36.364 0.00 0.00 36.39 3.32
176 177 5.762045 ACTACAGCTTGCAAACTTATGTTG 58.238 37.500 0.00 4.73 36.39 3.33
177 178 6.391227 AACTACAGCTTGCAAACTTATGTT 57.609 33.333 0.00 2.96 38.16 2.71
178 179 6.391227 AAACTACAGCTTGCAAACTTATGT 57.609 33.333 0.00 3.60 0.00 2.29
179 180 7.698836 AAAAACTACAGCTTGCAAACTTATG 57.301 32.000 0.00 0.00 0.00 1.90
206 207 8.888716 GGACTTTCCAATAAAAAGAAAAGCAAA 58.111 29.630 2.84 0.00 37.22 3.68
208 209 7.791029 AGGACTTTCCAATAAAAAGAAAAGCA 58.209 30.769 2.84 0.00 39.61 3.91
209 210 7.114953 CGAGGACTTTCCAATAAAAAGAAAAGC 59.885 37.037 2.84 0.00 39.61 3.51
212 213 7.576861 ACGAGGACTTTCCAATAAAAAGAAA 57.423 32.000 2.84 0.00 39.61 2.52
213 214 8.152246 TCTACGAGGACTTTCCAATAAAAAGAA 58.848 33.333 2.84 0.00 39.61 2.52
215 216 7.413109 GCTCTACGAGGACTTTCCAATAAAAAG 60.413 40.741 0.00 0.00 39.61 2.27
216 217 6.370718 GCTCTACGAGGACTTTCCAATAAAAA 59.629 38.462 0.00 0.00 39.61 1.94
217 218 5.873164 GCTCTACGAGGACTTTCCAATAAAA 59.127 40.000 0.00 0.00 39.61 1.52
220 221 4.021229 TGCTCTACGAGGACTTTCCAATA 58.979 43.478 0.00 0.00 39.61 1.90
221 222 2.832129 TGCTCTACGAGGACTTTCCAAT 59.168 45.455 0.00 0.00 39.61 3.16
222 223 2.244695 TGCTCTACGAGGACTTTCCAA 58.755 47.619 0.00 0.00 39.61 3.53
223 224 1.919240 TGCTCTACGAGGACTTTCCA 58.081 50.000 0.00 0.00 39.61 3.53
225 226 3.129638 ACTGATGCTCTACGAGGACTTTC 59.870 47.826 0.00 0.00 31.84 2.62
227 228 2.425312 CACTGATGCTCTACGAGGACTT 59.575 50.000 0.00 0.00 31.84 3.01
228 229 2.020720 CACTGATGCTCTACGAGGACT 58.979 52.381 0.00 0.00 31.84 3.85
232 233 1.393603 TCCCACTGATGCTCTACGAG 58.606 55.000 0.00 0.00 0.00 4.18
234 235 2.898729 AATCCCACTGATGCTCTACG 57.101 50.000 0.00 0.00 32.68 3.51
238 239 5.240403 GGAATAGAAAATCCCACTGATGCTC 59.760 44.000 0.00 0.00 32.68 4.26
239 240 5.136105 GGAATAGAAAATCCCACTGATGCT 58.864 41.667 0.00 0.00 32.68 3.79
240 241 4.023707 CGGAATAGAAAATCCCACTGATGC 60.024 45.833 0.00 0.00 32.68 3.91
241 242 5.008019 CACGGAATAGAAAATCCCACTGATG 59.992 44.000 0.00 0.00 32.68 3.07
242 243 5.126067 CACGGAATAGAAAATCCCACTGAT 58.874 41.667 0.00 0.00 34.22 2.90
246 247 2.031683 CGCACGGAATAGAAAATCCCAC 59.968 50.000 0.00 0.00 31.73 4.61
248 249 2.031683 CACGCACGGAATAGAAAATCCC 59.968 50.000 0.00 0.00 31.73 3.85
250 251 2.031683 CCCACGCACGGAATAGAAAATC 59.968 50.000 0.00 0.00 0.00 2.17
251 252 2.014128 CCCACGCACGGAATAGAAAAT 58.986 47.619 0.00 0.00 0.00 1.82
253 254 1.022451 GCCCACGCACGGAATAGAAA 61.022 55.000 0.00 0.00 34.03 2.52
254 255 1.448893 GCCCACGCACGGAATAGAA 60.449 57.895 0.00 0.00 34.03 2.10
256 257 2.125310 TGCCCACGCACGGAATAG 60.125 61.111 0.00 0.00 41.12 1.73
265 266 1.016130 CCGATCTATGATGCCCACGC 61.016 60.000 0.00 0.00 0.00 5.34
266 267 1.016130 GCCGATCTATGATGCCCACG 61.016 60.000 0.00 0.00 0.00 4.94
267 268 0.674895 GGCCGATCTATGATGCCCAC 60.675 60.000 0.00 0.00 36.07 4.61
270 271 3.201290 CAATAGGCCGATCTATGATGCC 58.799 50.000 0.00 0.00 42.48 4.40
272 273 5.728471 AGAACAATAGGCCGATCTATGATG 58.272 41.667 0.00 0.00 31.01 3.07
273 274 6.365970 AAGAACAATAGGCCGATCTATGAT 57.634 37.500 0.00 0.00 31.01 2.45
275 276 6.226787 AGAAAGAACAATAGGCCGATCTATG 58.773 40.000 0.00 0.00 31.01 2.23
276 277 6.426646 AGAAAGAACAATAGGCCGATCTAT 57.573 37.500 0.00 0.00 0.00 1.98
277 278 5.221461 GGAGAAAGAACAATAGGCCGATCTA 60.221 44.000 0.00 0.00 0.00 1.98
279 280 3.810386 GGAGAAAGAACAATAGGCCGATC 59.190 47.826 0.00 0.00 0.00 3.69
280 281 3.433740 GGGAGAAAGAACAATAGGCCGAT 60.434 47.826 0.00 0.00 0.00 4.18
282 283 2.289565 GGGAGAAAGAACAATAGGCCG 58.710 52.381 0.00 0.00 0.00 6.13
285 286 4.130118 CCGATGGGAGAAAGAACAATAGG 58.870 47.826 0.00 0.00 34.06 2.57
286 287 4.770795 ACCGATGGGAGAAAGAACAATAG 58.229 43.478 0.00 0.00 36.97 1.73
287 288 4.837093 ACCGATGGGAGAAAGAACAATA 57.163 40.909 0.00 0.00 36.97 1.90
288 289 3.721087 ACCGATGGGAGAAAGAACAAT 57.279 42.857 0.00 0.00 36.97 2.71
289 290 3.502123 AACCGATGGGAGAAAGAACAA 57.498 42.857 0.00 0.00 36.97 2.83
291 292 3.057526 CCAAAACCGATGGGAGAAAGAAC 60.058 47.826 0.00 0.00 36.97 3.01
292 293 3.153919 CCAAAACCGATGGGAGAAAGAA 58.846 45.455 0.00 0.00 36.97 2.52
301 302 1.627864 AACCTTCCCAAAACCGATGG 58.372 50.000 0.00 0.00 37.71 3.51
303 304 1.343142 GCAAACCTTCCCAAAACCGAT 59.657 47.619 0.00 0.00 0.00 4.18
305 306 0.750249 AGCAAACCTTCCCAAAACCG 59.250 50.000 0.00 0.00 0.00 4.44
306 307 2.833794 GAAGCAAACCTTCCCAAAACC 58.166 47.619 0.00 0.00 43.39 3.27
323 324 3.489059 CGCTGGAGAGAAGCTTCTAGAAG 60.489 52.174 28.53 25.42 37.73 2.85
325 326 2.020720 CGCTGGAGAGAAGCTTCTAGA 58.979 52.381 28.53 11.69 37.73 2.43
326 327 2.020720 TCGCTGGAGAGAAGCTTCTAG 58.979 52.381 28.53 21.74 37.73 2.43
327 328 2.130272 TCGCTGGAGAGAAGCTTCTA 57.870 50.000 28.53 12.47 37.73 2.10
328 329 1.261480 TTCGCTGGAGAGAAGCTTCT 58.739 50.000 28.83 28.83 41.00 2.85
329 330 2.086054 TTTCGCTGGAGAGAAGCTTC 57.914 50.000 19.11 19.11 38.57 3.86
330 331 2.550830 TTTTCGCTGGAGAGAAGCTT 57.449 45.000 0.00 0.00 38.57 3.74
331 332 2.235898 AGATTTTCGCTGGAGAGAAGCT 59.764 45.455 0.00 0.00 38.57 3.74
332 333 2.626840 AGATTTTCGCTGGAGAGAAGC 58.373 47.619 0.00 0.00 35.39 3.86
333 334 5.619625 AAAAGATTTTCGCTGGAGAGAAG 57.380 39.130 0.00 0.00 35.39 2.85
357 358 9.787532 CCTATTAAATCAGCAAAGAAAAATCGA 57.212 29.630 0.00 0.00 0.00 3.59
358 359 9.573133 ACCTATTAAATCAGCAAAGAAAAATCG 57.427 29.630 0.00 0.00 0.00 3.34
364 365 8.739972 GGAGAAACCTATTAAATCAGCAAAGAA 58.260 33.333 0.00 0.00 35.41 2.52
365 366 7.339466 GGGAGAAACCTATTAAATCAGCAAAGA 59.661 37.037 0.00 0.00 38.98 2.52
366 367 7.340487 AGGGAGAAACCTATTAAATCAGCAAAG 59.660 37.037 0.00 0.00 39.65 2.77
369 370 6.327386 AGGGAGAAACCTATTAAATCAGCA 57.673 37.500 0.00 0.00 39.65 4.41
500 501 9.547753 TCAAAACCAATTTCCGAATATGAAAAA 57.452 25.926 0.00 0.00 35.52 1.94
501 502 9.547753 TTCAAAACCAATTTCCGAATATGAAAA 57.452 25.926 0.00 0.00 35.52 2.29
502 503 9.717942 ATTCAAAACCAATTTCCGAATATGAAA 57.282 25.926 0.00 0.00 36.26 2.69
506 507 7.846066 TGGATTCAAAACCAATTTCCGAATAT 58.154 30.769 0.00 0.00 33.34 1.28
507 508 7.233389 TGGATTCAAAACCAATTTCCGAATA 57.767 32.000 0.00 0.00 33.34 1.75
509 510 5.537300 TGGATTCAAAACCAATTTCCGAA 57.463 34.783 0.00 0.00 32.93 4.30
511 512 6.310224 GTGTATGGATTCAAAACCAATTTCCG 59.690 38.462 0.00 0.00 39.69 4.30
513 514 8.776376 ATGTGTATGGATTCAAAACCAATTTC 57.224 30.769 0.00 0.00 39.69 2.17
568 569 8.640063 TCCTGAATTCTCAAAAATCTTCATGA 57.360 30.769 7.05 0.00 0.00 3.07
643 644 7.346960 CCCCCTGAATTTAAAAATATTCCTGGA 59.653 37.037 0.00 0.00 31.09 3.86
644 645 7.346960 TCCCCCTGAATTTAAAAATATTCCTGG 59.653 37.037 0.00 0.00 31.29 4.45
645 646 8.317776 TCCCCCTGAATTTAAAAATATTCCTG 57.682 34.615 0.00 0.00 31.29 3.86
647 648 9.967451 TTTTCCCCCTGAATTTAAAAATATTCC 57.033 29.630 0.00 0.00 31.67 3.01
652 653 9.295825 GATTGTTTTCCCCCTGAATTTAAAAAT 57.704 29.630 0.00 0.00 31.67 1.82
653 654 8.498575 AGATTGTTTTCCCCCTGAATTTAAAAA 58.501 29.630 0.00 0.00 31.67 1.94
654 655 8.040002 AGATTGTTTTCCCCCTGAATTTAAAA 57.960 30.769 0.00 0.00 31.67 1.52
655 656 7.625498 AGATTGTTTTCCCCCTGAATTTAAA 57.375 32.000 0.00 0.00 31.67 1.52
656 657 7.625498 AAGATTGTTTTCCCCCTGAATTTAA 57.375 32.000 0.00 0.00 31.67 1.52
657 658 8.728596 TTAAGATTGTTTTCCCCCTGAATTTA 57.271 30.769 0.00 0.00 31.67 1.40
658 659 7.625498 TTAAGATTGTTTTCCCCCTGAATTT 57.375 32.000 0.00 0.00 31.67 1.82
661 662 6.613679 AGTTTTAAGATTGTTTTCCCCCTGAA 59.386 34.615 0.00 0.00 0.00 3.02
662 663 6.140377 AGTTTTAAGATTGTTTTCCCCCTGA 58.860 36.000 0.00 0.00 0.00 3.86
663 664 6.419484 AGTTTTAAGATTGTTTTCCCCCTG 57.581 37.500 0.00 0.00 0.00 4.45
664 665 7.446106 AAAGTTTTAAGATTGTTTTCCCCCT 57.554 32.000 0.00 0.00 0.00 4.79
665 666 7.012894 CCAAAAGTTTTAAGATTGTTTTCCCCC 59.987 37.037 0.00 0.00 0.00 5.40
666 667 7.012894 CCCAAAAGTTTTAAGATTGTTTTCCCC 59.987 37.037 0.00 0.00 0.00 4.81
668 669 7.012894 CCCCCAAAAGTTTTAAGATTGTTTTCC 59.987 37.037 0.00 0.00 0.00 3.13
669 670 7.554835 ACCCCCAAAAGTTTTAAGATTGTTTTC 59.445 33.333 0.00 0.00 0.00 2.29
670 671 7.406916 ACCCCCAAAAGTTTTAAGATTGTTTT 58.593 30.769 0.00 0.00 0.00 2.43
672 673 6.408776 GGACCCCCAAAAGTTTTAAGATTGTT 60.409 38.462 0.00 0.00 0.00 2.83
674 675 5.512404 GGGACCCCCAAAAGTTTTAAGATTG 60.512 44.000 0.00 0.00 44.65 2.67
675 676 4.595781 GGGACCCCCAAAAGTTTTAAGATT 59.404 41.667 0.00 0.00 44.65 2.40
676 677 4.164981 GGGACCCCCAAAAGTTTTAAGAT 58.835 43.478 0.00 0.00 44.65 2.40
677 678 3.578978 GGGACCCCCAAAAGTTTTAAGA 58.421 45.455 0.00 0.00 44.65 2.10
678 679 2.297880 CGGGACCCCCAAAAGTTTTAAG 59.702 50.000 4.46 0.00 45.83 1.85
680 681 1.498145 TCGGGACCCCCAAAAGTTTTA 59.502 47.619 4.46 0.00 45.83 1.52
681 682 0.262285 TCGGGACCCCCAAAAGTTTT 59.738 50.000 4.46 0.00 45.83 2.43
682 683 0.485543 ATCGGGACCCCCAAAAGTTT 59.514 50.000 4.46 0.00 45.83 2.66
683 684 0.485543 AATCGGGACCCCCAAAAGTT 59.514 50.000 4.46 0.00 45.83 2.66
684 685 1.374572 TAATCGGGACCCCCAAAAGT 58.625 50.000 4.46 0.00 45.83 2.66
685 686 2.748209 ATAATCGGGACCCCCAAAAG 57.252 50.000 4.46 0.00 45.83 2.27
686 687 3.367321 GAAATAATCGGGACCCCCAAAA 58.633 45.455 4.46 0.00 45.83 2.44
687 688 2.358405 GGAAATAATCGGGACCCCCAAA 60.358 50.000 4.46 0.00 45.83 3.28
688 689 1.215924 GGAAATAATCGGGACCCCCAA 59.784 52.381 4.46 0.00 45.83 4.12
689 690 0.848053 GGAAATAATCGGGACCCCCA 59.152 55.000 4.46 0.00 45.83 4.96
690 691 1.146452 AGGAAATAATCGGGACCCCC 58.854 55.000 4.46 0.00 41.09 5.40
691 692 1.772453 TCAGGAAATAATCGGGACCCC 59.228 52.381 4.46 0.00 0.00 4.95
692 693 3.570912 TTCAGGAAATAATCGGGACCC 57.429 47.619 0.00 0.00 0.00 4.46
694 695 5.526111 TCGAATTTCAGGAAATAATCGGGAC 59.474 40.000 20.13 3.80 39.54 4.46
696 697 6.371809 TTCGAATTTCAGGAAATAATCGGG 57.628 37.500 20.13 5.35 39.54 5.14
703 704 9.996554 ACCTAAAAATTTCGAATTTCAGGAAAT 57.003 25.926 16.92 1.50 42.35 2.17
705 706 9.255304 CAACCTAAAAATTTCGAATTTCAGGAA 57.745 29.630 16.92 0.00 32.18 3.36
707 708 7.384932 AGCAACCTAAAAATTTCGAATTTCAGG 59.615 33.333 10.64 10.64 33.16 3.86
711 712 9.535878 TGTTAGCAACCTAAAAATTTCGAATTT 57.464 25.926 0.00 0.00 35.43 1.82
712 713 9.705290 ATGTTAGCAACCTAAAAATTTCGAATT 57.295 25.926 0.00 0.00 35.43 2.17
794 795 7.011857 TGCAAAAAGGACATGTAATTTGGAAAC 59.988 33.333 18.70 8.82 0.00 2.78
795 796 7.050377 TGCAAAAAGGACATGTAATTTGGAAA 58.950 30.769 18.70 3.61 0.00 3.13
796 797 6.586344 TGCAAAAAGGACATGTAATTTGGAA 58.414 32.000 18.70 5.01 0.00 3.53
797 798 6.166984 TGCAAAAAGGACATGTAATTTGGA 57.833 33.333 18.70 15.61 0.00 3.53
798 799 6.857777 TTGCAAAAAGGACATGTAATTTGG 57.142 33.333 18.70 11.35 0.00 3.28
799 800 7.863666 ACATTGCAAAAAGGACATGTAATTTG 58.136 30.769 1.71 9.22 28.78 2.32
802 803 9.723601 AAATACATTGCAAAAAGGACATGTAAT 57.276 25.926 1.71 0.00 30.93 1.89
803 804 9.553064 AAAATACATTGCAAAAAGGACATGTAA 57.447 25.926 1.71 0.00 0.00 2.41
805 806 9.553064 TTAAAATACATTGCAAAAAGGACATGT 57.447 25.926 1.71 0.00 0.00 3.21
848 849 8.567948 CAGCCTCTTTTTGACTAGATTTTGTTA 58.432 33.333 0.00 0.00 0.00 2.41
849 850 7.428826 CAGCCTCTTTTTGACTAGATTTTGTT 58.571 34.615 0.00 0.00 0.00 2.83
853 854 4.460731 GCCAGCCTCTTTTTGACTAGATTT 59.539 41.667 0.00 0.00 0.00 2.17
854 855 4.013050 GCCAGCCTCTTTTTGACTAGATT 58.987 43.478 0.00 0.00 0.00 2.40
855 856 3.009473 TGCCAGCCTCTTTTTGACTAGAT 59.991 43.478 0.00 0.00 0.00 1.98
856 857 2.371841 TGCCAGCCTCTTTTTGACTAGA 59.628 45.455 0.00 0.00 0.00 2.43
857 858 2.783135 TGCCAGCCTCTTTTTGACTAG 58.217 47.619 0.00 0.00 0.00 2.57
858 859 2.949177 TGCCAGCCTCTTTTTGACTA 57.051 45.000 0.00 0.00 0.00 2.59
859 860 2.071778 TTGCCAGCCTCTTTTTGACT 57.928 45.000 0.00 0.00 0.00 3.41
860 861 2.866156 GTTTTGCCAGCCTCTTTTTGAC 59.134 45.455 0.00 0.00 0.00 3.18
861 862 2.481104 CGTTTTGCCAGCCTCTTTTTGA 60.481 45.455 0.00 0.00 0.00 2.69
862 863 1.860326 CGTTTTGCCAGCCTCTTTTTG 59.140 47.619 0.00 0.00 0.00 2.44
863 864 1.806247 GCGTTTTGCCAGCCTCTTTTT 60.806 47.619 0.00 0.00 37.76 1.94
864 865 0.249447 GCGTTTTGCCAGCCTCTTTT 60.249 50.000 0.00 0.00 37.76 2.27
865 866 1.363807 GCGTTTTGCCAGCCTCTTT 59.636 52.632 0.00 0.00 37.76 2.52
875 876 1.672881 AGATCTATGCTGGCGTTTTGC 59.327 47.619 0.00 0.00 45.38 3.68
876 877 4.361451 AAAGATCTATGCTGGCGTTTTG 57.639 40.909 0.00 0.00 0.00 2.44
877 878 5.163513 CAAAAAGATCTATGCTGGCGTTTT 58.836 37.500 0.00 0.00 0.00 2.43
878 879 4.218417 ACAAAAAGATCTATGCTGGCGTTT 59.782 37.500 0.00 0.00 0.00 3.60
879 880 3.758554 ACAAAAAGATCTATGCTGGCGTT 59.241 39.130 0.00 0.00 0.00 4.84
880 881 3.347216 ACAAAAAGATCTATGCTGGCGT 58.653 40.909 0.00 0.00 0.00 5.68
881 882 4.361451 AACAAAAAGATCTATGCTGGCG 57.639 40.909 0.00 0.00 0.00 5.69
896 897 9.899226 CCCTCAAATACAAAAACAAAAACAAAA 57.101 25.926 0.00 0.00 0.00 2.44
898 899 7.665974 ACCCCTCAAATACAAAAACAAAAACAA 59.334 29.630 0.00 0.00 0.00 2.83
899 900 7.168905 ACCCCTCAAATACAAAAACAAAAACA 58.831 30.769 0.00 0.00 0.00 2.83
900 901 7.618502 ACCCCTCAAATACAAAAACAAAAAC 57.381 32.000 0.00 0.00 0.00 2.43
901 902 8.541234 ACTACCCCTCAAATACAAAAACAAAAA 58.459 29.630 0.00 0.00 0.00 1.94
902 903 8.080363 ACTACCCCTCAAATACAAAAACAAAA 57.920 30.769 0.00 0.00 0.00 2.44
904 905 8.219178 TCTACTACCCCTCAAATACAAAAACAA 58.781 33.333 0.00 0.00 0.00 2.83
909 910 9.816787 AAAAATCTACTACCCCTCAAATACAAA 57.183 29.630 0.00 0.00 0.00 2.83
933 934 5.045215 TGCGTAGTCTTCTCGAAAGAAAAA 58.955 37.500 10.34 0.26 40.95 1.94
936 937 3.909776 TGCGTAGTCTTCTCGAAAGAA 57.090 42.857 10.34 0.22 41.32 2.52
937 938 3.004002 TGTTGCGTAGTCTTCTCGAAAGA 59.996 43.478 6.10 6.10 39.12 2.52
938 939 3.305964 TGTTGCGTAGTCTTCTCGAAAG 58.694 45.455 0.00 0.00 0.00 2.62
940 941 3.305964 CTTGTTGCGTAGTCTTCTCGAA 58.694 45.455 0.00 0.00 0.00 3.71
942 943 1.387084 GCTTGTTGCGTAGTCTTCTCG 59.613 52.381 0.00 0.00 0.00 4.04
944 945 8.488219 TACTACTAGCTTGTTGCGTAGTCTTCT 61.488 40.741 6.03 0.00 43.09 2.85
946 947 5.413833 TACTACTAGCTTGTTGCGTAGTCTT 59.586 40.000 6.03 0.00 43.09 3.01
947 948 4.940046 TACTACTAGCTTGTTGCGTAGTCT 59.060 41.667 6.03 0.00 43.09 3.24
948 949 5.064452 TCTACTACTAGCTTGTTGCGTAGTC 59.936 44.000 20.20 0.00 43.09 2.59
954 955 6.157211 TGTCTTTCTACTACTAGCTTGTTGC 58.843 40.000 6.03 0.00 43.29 4.17
955 956 7.594714 TCTGTCTTTCTACTACTAGCTTGTTG 58.405 38.462 6.03 7.18 0.00 3.33
956 957 7.762588 TCTGTCTTTCTACTACTAGCTTGTT 57.237 36.000 6.03 0.00 0.00 2.83
957 958 7.762588 TTCTGTCTTTCTACTACTAGCTTGT 57.237 36.000 6.00 6.00 0.00 3.16
967 968 8.043710 CCCATCACTTATTTCTGTCTTTCTACT 58.956 37.037 0.00 0.00 0.00 2.57
968 969 7.281100 CCCCATCACTTATTTCTGTCTTTCTAC 59.719 40.741 0.00 0.00 0.00 2.59
969 970 7.338710 CCCCATCACTTATTTCTGTCTTTCTA 58.661 38.462 0.00 0.00 0.00 2.10
970 971 6.183347 CCCCATCACTTATTTCTGTCTTTCT 58.817 40.000 0.00 0.00 0.00 2.52
971 972 5.358160 CCCCCATCACTTATTTCTGTCTTTC 59.642 44.000 0.00 0.00 0.00 2.62
974 975 3.372025 GCCCCCATCACTTATTTCTGTCT 60.372 47.826 0.00 0.00 0.00 3.41
975 976 2.952310 GCCCCCATCACTTATTTCTGTC 59.048 50.000 0.00 0.00 0.00 3.51
976 977 2.358195 GGCCCCCATCACTTATTTCTGT 60.358 50.000 0.00 0.00 0.00 3.41
977 978 2.310538 GGCCCCCATCACTTATTTCTG 58.689 52.381 0.00 0.00 0.00 3.02
978 979 1.217942 GGGCCCCCATCACTTATTTCT 59.782 52.381 12.23 0.00 35.81 2.52
979 980 1.063266 TGGGCCCCCATCACTTATTTC 60.063 52.381 22.27 0.00 41.89 2.17
980 981 1.014804 TGGGCCCCCATCACTTATTT 58.985 50.000 22.27 0.00 41.89 1.40
981 982 1.014804 TTGGGCCCCCATCACTTATT 58.985 50.000 22.27 0.00 46.64 1.40
982 983 1.133072 CATTGGGCCCCCATCACTTAT 60.133 52.381 22.27 0.00 46.64 1.73
983 984 0.261402 CATTGGGCCCCCATCACTTA 59.739 55.000 22.27 0.00 46.64 2.24
984 985 1.002017 CATTGGGCCCCCATCACTT 59.998 57.895 22.27 0.00 46.64 3.16
985 986 1.517538 TTCATTGGGCCCCCATCACT 61.518 55.000 22.27 0.00 46.64 3.41
986 987 1.001503 TTCATTGGGCCCCCATCAC 59.998 57.895 22.27 0.00 46.64 3.06
989 990 2.043046 CGTTCATTGGGCCCCCAT 60.043 61.111 22.27 8.82 46.64 4.00
991 992 1.917336 TACTCGTTCATTGGGCCCCC 61.917 60.000 22.27 0.00 0.00 5.40
992 993 0.182775 ATACTCGTTCATTGGGCCCC 59.817 55.000 22.27 0.23 0.00 5.80
993 994 1.134220 TCATACTCGTTCATTGGGCCC 60.134 52.381 17.59 17.59 0.00 5.80
995 996 4.883083 TCTATCATACTCGTTCATTGGGC 58.117 43.478 0.00 0.00 0.00 5.36
997 998 6.865726 CCTCTTCTATCATACTCGTTCATTGG 59.134 42.308 0.00 0.00 0.00 3.16
998 999 7.429633 ACCTCTTCTATCATACTCGTTCATTG 58.570 38.462 0.00 0.00 0.00 2.82
1000 1001 7.504238 AGAACCTCTTCTATCATACTCGTTCAT 59.496 37.037 0.00 0.00 34.74 2.57
1001 1002 6.829298 AGAACCTCTTCTATCATACTCGTTCA 59.171 38.462 0.00 0.00 34.74 3.18
1003 1004 8.749026 TTAGAACCTCTTCTATCATACTCGTT 57.251 34.615 0.00 0.00 38.54 3.85
1004 1005 8.749026 TTTAGAACCTCTTCTATCATACTCGT 57.251 34.615 0.00 0.00 38.54 4.18
1014 1015 9.457436 ACACTTTTGTTTTTAGAACCTCTTCTA 57.543 29.630 0.00 0.00 33.39 2.10
1015 1016 8.349568 ACACTTTTGTTTTTAGAACCTCTTCT 57.650 30.769 0.00 0.00 34.91 2.85
1019 1020 9.590088 CGTATACACTTTTGTTTTTAGAACCTC 57.410 33.333 3.32 0.00 37.15 3.85
1020 1021 8.071967 GCGTATACACTTTTGTTTTTAGAACCT 58.928 33.333 3.32 0.00 37.15 3.50
1022 1023 7.856894 TGGCGTATACACTTTTGTTTTTAGAAC 59.143 33.333 3.32 0.00 37.15 3.01
1024 1025 7.493743 TGGCGTATACACTTTTGTTTTTAGA 57.506 32.000 3.32 0.00 37.15 2.10
1025 1026 6.304683 GCTGGCGTATACACTTTTGTTTTTAG 59.695 38.462 3.32 0.00 37.15 1.85
1027 1028 4.979815 GCTGGCGTATACACTTTTGTTTTT 59.020 37.500 3.32 0.00 37.15 1.94
1028 1029 4.542735 GCTGGCGTATACACTTTTGTTTT 58.457 39.130 3.32 0.00 37.15 2.43
1030 1031 2.486592 GGCTGGCGTATACACTTTTGTT 59.513 45.455 3.32 0.00 37.15 2.83
1032 1033 1.062002 CGGCTGGCGTATACACTTTTG 59.938 52.381 16.07 0.00 0.00 2.44
1033 1034 1.066716 TCGGCTGGCGTATACACTTTT 60.067 47.619 23.07 0.00 0.00 2.27
1034 1035 0.533491 TCGGCTGGCGTATACACTTT 59.467 50.000 23.07 0.00 0.00 2.66
1037 1038 0.594284 GACTCGGCTGGCGTATACAC 60.594 60.000 23.07 6.83 0.00 2.90
1038 1039 1.731433 GGACTCGGCTGGCGTATACA 61.731 60.000 23.07 2.52 0.00 2.29
1039 1040 1.007618 GGACTCGGCTGGCGTATAC 60.008 63.158 23.07 9.71 0.00 1.47
1041 1042 3.900892 CGGACTCGGCTGGCGTAT 61.901 66.667 23.07 12.44 0.00 3.06
1049 1050 4.176851 GTCGGAGTCGGACTCGGC 62.177 72.222 30.12 22.64 45.96 5.54
1050 1051 3.507009 GGTCGGAGTCGGACTCGG 61.507 72.222 29.46 29.46 45.96 4.63
1052 1053 3.507009 CGGGTCGGAGTCGGACTC 61.507 72.222 26.28 26.28 44.32 3.36
1054 1055 3.507009 CTCGGGTCGGAGTCGGAC 61.507 72.222 19.67 19.67 36.95 4.79
1055 1056 4.790962 CCTCGGGTCGGAGTCGGA 62.791 72.222 0.00 0.00 36.95 4.55
1071 1072 1.603739 GAACAACCCAGGAGCCACC 60.604 63.158 0.00 0.00 39.35 4.61
1072 1073 1.966451 CGAACAACCCAGGAGCCAC 60.966 63.158 0.00 0.00 0.00 5.01
1074 1075 3.056328 GCGAACAACCCAGGAGCC 61.056 66.667 0.00 0.00 0.00 4.70
1075 1076 3.056328 GGCGAACAACCCAGGAGC 61.056 66.667 0.00 0.00 0.00 4.70
1076 1077 1.672356 CAGGCGAACAACCCAGGAG 60.672 63.158 0.00 0.00 0.00 3.69
1078 1079 2.672996 CCAGGCGAACAACCCAGG 60.673 66.667 0.00 0.00 0.00 4.45
1079 1080 1.966451 GTCCAGGCGAACAACCCAG 60.966 63.158 0.00 0.00 0.00 4.45
1081 1082 0.035820 TATGTCCAGGCGAACAACCC 60.036 55.000 0.00 0.00 0.00 4.11
1082 1083 2.038387 ATATGTCCAGGCGAACAACC 57.962 50.000 0.00 0.00 0.00 3.77
1083 1084 4.384846 CGTATATATGTCCAGGCGAACAAC 59.615 45.833 0.00 0.00 0.00 3.32
1084 1085 4.552355 CGTATATATGTCCAGGCGAACAA 58.448 43.478 0.00 0.00 0.00 2.83
1086 1087 2.921754 GCGTATATATGTCCAGGCGAAC 59.078 50.000 3.92 0.00 0.00 3.95
1087 1088 2.094390 GGCGTATATATGTCCAGGCGAA 60.094 50.000 3.92 0.00 0.00 4.70
1088 1089 1.475280 GGCGTATATATGTCCAGGCGA 59.525 52.381 3.92 0.00 0.00 5.54
1089 1090 1.203758 TGGCGTATATATGTCCAGGCG 59.796 52.381 11.73 0.00 0.00 5.52
1090 1091 2.893637 CTGGCGTATATATGTCCAGGC 58.106 52.381 23.95 7.11 40.34 4.85
1091 1092 2.418746 GGCTGGCGTATATATGTCCAGG 60.419 54.545 28.15 18.36 43.31 4.45
1092 1093 2.418746 GGGCTGGCGTATATATGTCCAG 60.419 54.545 25.68 25.68 45.26 3.86
1093 1094 1.553248 GGGCTGGCGTATATATGTCCA 59.447 52.381 13.89 13.89 0.00 4.02
1094 1095 1.134491 GGGGCTGGCGTATATATGTCC 60.134 57.143 4.12 6.34 0.00 4.02
1095 1096 1.134491 GGGGGCTGGCGTATATATGTC 60.134 57.143 0.00 0.00 0.00 3.06
1097 1098 0.179084 CGGGGGCTGGCGTATATATG 60.179 60.000 0.00 0.00 0.00 1.78
1098 1099 1.968050 GCGGGGGCTGGCGTATATAT 61.968 60.000 0.00 0.00 0.00 0.86
1099 1100 2.652095 GCGGGGGCTGGCGTATATA 61.652 63.158 0.00 0.00 0.00 0.86
1100 1101 4.016706 GCGGGGGCTGGCGTATAT 62.017 66.667 0.00 0.00 0.00 0.86
1116 1117 4.475135 GGAGGAGGTTGAGGCGGC 62.475 72.222 0.00 0.00 0.00 6.53
1117 1118 2.685380 AGGAGGAGGTTGAGGCGG 60.685 66.667 0.00 0.00 0.00 6.13
1118 1119 1.831652 AACAGGAGGAGGTTGAGGCG 61.832 60.000 0.00 0.00 0.00 5.52
1119 1120 0.402121 AAACAGGAGGAGGTTGAGGC 59.598 55.000 0.00 0.00 0.00 4.70
1120 1121 2.553247 GGAAAACAGGAGGAGGTTGAGG 60.553 54.545 0.00 0.00 0.00 3.86
1121 1122 2.373502 AGGAAAACAGGAGGAGGTTGAG 59.626 50.000 0.00 0.00 0.00 3.02
1122 1123 2.418669 AGGAAAACAGGAGGAGGTTGA 58.581 47.619 0.00 0.00 0.00 3.18
1123 1124 2.959465 AGGAAAACAGGAGGAGGTTG 57.041 50.000 0.00 0.00 0.00 3.77
1127 1128 3.558109 GGTCTGAAGGAAAACAGGAGGAG 60.558 52.174 0.00 0.00 35.20 3.69
1128 1129 2.372172 GGTCTGAAGGAAAACAGGAGGA 59.628 50.000 0.00 0.00 35.20 3.71
1129 1130 2.553247 GGGTCTGAAGGAAAACAGGAGG 60.553 54.545 0.00 0.00 35.20 4.30
1131 1132 2.131854 TGGGTCTGAAGGAAAACAGGA 58.868 47.619 0.00 0.00 35.20 3.86
1132 1133 2.623416 GTTGGGTCTGAAGGAAAACAGG 59.377 50.000 0.00 0.00 35.20 4.00
1133 1134 2.290641 CGTTGGGTCTGAAGGAAAACAG 59.709 50.000 0.00 0.00 35.72 3.16
1134 1135 2.092861 TCGTTGGGTCTGAAGGAAAACA 60.093 45.455 0.00 0.00 0.00 2.83
1135 1136 2.548480 CTCGTTGGGTCTGAAGGAAAAC 59.452 50.000 0.00 0.00 0.00 2.43
1137 1138 2.037251 CTCTCGTTGGGTCTGAAGGAAA 59.963 50.000 0.00 0.00 0.00 3.13
1139 1140 1.203013 TCTCTCGTTGGGTCTGAAGGA 60.203 52.381 0.00 0.00 0.00 3.36
1143 1144 1.351350 TCTCTCTCTCGTTGGGTCTGA 59.649 52.381 0.00 0.00 0.00 3.27
1144 1145 1.470890 GTCTCTCTCTCGTTGGGTCTG 59.529 57.143 0.00 0.00 0.00 3.51
1145 1146 1.074084 TGTCTCTCTCTCGTTGGGTCT 59.926 52.381 0.00 0.00 0.00 3.85
1146 1147 1.470890 CTGTCTCTCTCTCGTTGGGTC 59.529 57.143 0.00 0.00 0.00 4.46
1147 1148 1.074084 TCTGTCTCTCTCTCGTTGGGT 59.926 52.381 0.00 0.00 0.00 4.51
1148 1149 1.742831 CTCTGTCTCTCTCTCGTTGGG 59.257 57.143 0.00 0.00 0.00 4.12
1149 1150 2.705730 TCTCTGTCTCTCTCTCGTTGG 58.294 52.381 0.00 0.00 0.00 3.77
1152 1153 3.945285 GGATTTCTCTGTCTCTCTCTCGT 59.055 47.826 0.00 0.00 0.00 4.18
1154 1155 3.636764 GGGGATTTCTCTGTCTCTCTCTC 59.363 52.174 0.00 0.00 0.00 3.20
1155 1156 3.012274 TGGGGATTTCTCTGTCTCTCTCT 59.988 47.826 0.00 0.00 0.00 3.10
1156 1157 3.370104 TGGGGATTTCTCTGTCTCTCTC 58.630 50.000 0.00 0.00 0.00 3.20
1157 1158 3.481559 TGGGGATTTCTCTGTCTCTCT 57.518 47.619 0.00 0.00 0.00 3.10
1159 1160 5.032846 TGTATTGGGGATTTCTCTGTCTCT 58.967 41.667 0.00 0.00 0.00 3.10
1160 1161 5.119694 GTGTATTGGGGATTTCTCTGTCTC 58.880 45.833 0.00 0.00 0.00 3.36
1161 1162 4.080299 GGTGTATTGGGGATTTCTCTGTCT 60.080 45.833 0.00 0.00 0.00 3.41
1162 1163 4.200092 GGTGTATTGGGGATTTCTCTGTC 58.800 47.826 0.00 0.00 0.00 3.51
1163 1164 3.591527 TGGTGTATTGGGGATTTCTCTGT 59.408 43.478 0.00 0.00 0.00 3.41
1164 1165 4.235079 TGGTGTATTGGGGATTTCTCTG 57.765 45.455 0.00 0.00 0.00 3.35
1166 1167 4.855340 TCTTGGTGTATTGGGGATTTCTC 58.145 43.478 0.00 0.00 0.00 2.87
1168 1169 3.381590 GCTCTTGGTGTATTGGGGATTTC 59.618 47.826 0.00 0.00 0.00 2.17
1169 1170 3.365472 GCTCTTGGTGTATTGGGGATTT 58.635 45.455 0.00 0.00 0.00 2.17
1170 1171 2.358195 GGCTCTTGGTGTATTGGGGATT 60.358 50.000 0.00 0.00 0.00 3.01
1172 1173 0.623723 GGCTCTTGGTGTATTGGGGA 59.376 55.000 0.00 0.00 0.00 4.81
1174 1175 1.376609 GCGGCTCTTGGTGTATTGGG 61.377 60.000 0.00 0.00 0.00 4.12
1175 1176 1.376609 GGCGGCTCTTGGTGTATTGG 61.377 60.000 0.00 0.00 0.00 3.16
1176 1177 0.392998 AGGCGGCTCTTGGTGTATTG 60.393 55.000 5.25 0.00 0.00 1.90
1177 1178 0.107654 GAGGCGGCTCTTGGTGTATT 60.108 55.000 30.02 0.00 0.00 1.89
1178 1179 1.522569 GAGGCGGCTCTTGGTGTAT 59.477 57.895 30.02 0.00 0.00 2.29
1180 1181 4.379243 CGAGGCGGCTCTTGGTGT 62.379 66.667 32.85 0.00 0.00 4.16
1233 5743 0.813210 CCTTGAAGATCGCAGCCTCC 60.813 60.000 0.00 0.00 0.00 4.30
1239 5749 0.036732 ACTTGGCCTTGAAGATCGCA 59.963 50.000 3.32 0.00 0.00 5.10
1246 5756 3.362040 CCATGGACTTGGCCTTGAA 57.638 52.632 5.56 0.00 35.67 2.69
1259 5769 2.819595 CCTCGTTGTCCGCCATGG 60.820 66.667 7.63 7.63 40.09 3.66
1260 5770 1.811266 CTCCTCGTTGTCCGCCATG 60.811 63.158 0.00 0.00 36.19 3.66
1261 5771 2.579201 CTCCTCGTTGTCCGCCAT 59.421 61.111 0.00 0.00 36.19 4.40
1262 5772 3.691342 CCTCCTCGTTGTCCGCCA 61.691 66.667 0.00 0.00 36.19 5.69
1263 5773 3.692406 ACCTCCTCGTTGTCCGCC 61.692 66.667 0.00 0.00 36.19 6.13
1264 5774 2.432628 CACCTCCTCGTTGTCCGC 60.433 66.667 0.00 0.00 36.19 5.54
1265 5775 1.080705 GACACCTCCTCGTTGTCCG 60.081 63.158 0.00 0.00 38.13 4.79
1266 5776 1.080705 CGACACCTCCTCGTTGTCC 60.081 63.158 0.00 0.00 0.00 4.02
1267 5777 0.386985 GACGACACCTCCTCGTTGTC 60.387 60.000 0.00 0.00 44.28 3.18
1268 5778 1.658673 GACGACACCTCCTCGTTGT 59.341 57.895 0.00 0.00 44.28 3.32
1269 5779 1.080705 GGACGACACCTCCTCGTTG 60.081 63.158 0.00 0.00 44.28 4.10
1270 5780 2.273912 GGGACGACACCTCCTCGTT 61.274 63.158 0.00 0.00 44.28 3.85
1271 5781 2.675772 GGGACGACACCTCCTCGT 60.676 66.667 0.00 0.00 46.86 4.18
1272 5782 2.361357 AGGGACGACACCTCCTCG 60.361 66.667 0.00 0.00 31.01 4.63
1277 5787 2.584391 GCCTTGAGGGACGACACCT 61.584 63.158 0.00 0.00 42.18 4.00
1278 5788 2.047179 GCCTTGAGGGACGACACC 60.047 66.667 0.00 0.00 37.23 4.16
1279 5789 2.047179 GGCCTTGAGGGACGACAC 60.047 66.667 0.00 0.00 37.23 3.67
1284 5794 1.002011 GGTCTTGGCCTTGAGGGAC 60.002 63.158 3.32 3.23 45.52 4.46
1285 5795 1.065410 TTGGTCTTGGCCTTGAGGGA 61.065 55.000 3.32 0.00 37.23 4.20
1286 5796 0.610232 CTTGGTCTTGGCCTTGAGGG 60.610 60.000 3.32 0.00 35.18 4.30
1287 5797 0.610232 CCTTGGTCTTGGCCTTGAGG 60.610 60.000 3.32 0.00 38.53 3.86
1288 5798 1.246737 GCCTTGGTCTTGGCCTTGAG 61.247 60.000 3.32 0.00 43.11 3.02
1289 5799 1.228552 GCCTTGGTCTTGGCCTTGA 60.229 57.895 3.32 0.00 43.11 3.02
1290 5800 3.369921 GCCTTGGTCTTGGCCTTG 58.630 61.111 3.32 0.00 43.11 3.61
1295 5805 2.278330 GCCTTGGCCTTGGTCTTGG 61.278 63.158 3.32 0.00 0.00 3.61
1300 5810 2.203684 CTTGGCCTTGGCCTTGGT 60.204 61.111 28.37 0.00 0.00 3.67
1346 5859 3.804193 CCTTCGCCTTCGCCTTGC 61.804 66.667 0.00 0.00 35.26 4.01
1379 5892 2.273449 CCTTGGCCTTGCGGATCT 59.727 61.111 3.32 0.00 0.00 2.75
1407 5920 3.406595 GATGACCCCCGCCTCCTTG 62.407 68.421 0.00 0.00 0.00 3.61
1423 5936 2.754658 GCAGCAGCAGGCCTTGAT 60.755 61.111 0.00 0.00 46.50 2.57
1553 6069 1.305718 AAGCGAGCCTTCTCCTCCT 60.306 57.895 0.00 0.00 35.94 3.69
1554 6070 1.142965 GAAGCGAGCCTTCTCCTCC 59.857 63.158 0.00 0.00 45.27 4.30
1555 6071 4.825377 GAAGCGAGCCTTCTCCTC 57.175 61.111 0.00 0.00 45.27 3.71
1712 6262 0.589229 GCCGAGTCGTAGATCGTGTG 60.589 60.000 12.31 0.00 40.67 3.82
1715 6265 2.532256 CGGCCGAGTCGTAGATCGT 61.532 63.158 24.07 0.00 40.67 3.73
1716 6266 2.248724 CGGCCGAGTCGTAGATCG 59.751 66.667 24.07 4.05 40.67 3.69
1744 6295 1.409427 CTCTAGAAATCGAACCCGGCT 59.591 52.381 0.00 0.00 36.24 5.52
1784 6346 7.413657 CGACCTACAAAAGAAGTCTTGTTTCAA 60.414 37.037 8.07 0.00 37.05 2.69
1791 6353 4.377897 CCACGACCTACAAAAGAAGTCTT 58.622 43.478 0.00 0.00 37.91 3.01
1795 6357 3.121738 ACCCACGACCTACAAAAGAAG 57.878 47.619 0.00 0.00 0.00 2.85
1803 6365 4.824289 TGAAGAAATAACCCACGACCTAC 58.176 43.478 0.00 0.00 0.00 3.18
1806 6368 3.671716 ACTGAAGAAATAACCCACGACC 58.328 45.455 0.00 0.00 0.00 4.79
1809 6371 5.941948 AAGAACTGAAGAAATAACCCACG 57.058 39.130 0.00 0.00 0.00 4.94
1810 6372 7.979537 ACAAAAAGAACTGAAGAAATAACCCAC 59.020 33.333 0.00 0.00 0.00 4.61
1812 6374 8.942338 AACAAAAAGAACTGAAGAAATAACCC 57.058 30.769 0.00 0.00 0.00 4.11
1813 6375 9.581099 TGAACAAAAAGAACTGAAGAAATAACC 57.419 29.630 0.00 0.00 0.00 2.85
1815 6377 9.301153 GCTGAACAAAAAGAACTGAAGAAATAA 57.699 29.630 0.00 0.00 0.00 1.40
1872 6449 4.013267 ACATGACCATATAGCTCCAAGC 57.987 45.455 0.00 0.00 42.84 4.01
1873 6450 9.376075 CTATTTACATGACCATATAGCTCCAAG 57.624 37.037 0.00 0.00 0.00 3.61
1874 6451 9.100197 TCTATTTACATGACCATATAGCTCCAA 57.900 33.333 0.00 0.00 0.00 3.53
1875 6452 8.664669 TCTATTTACATGACCATATAGCTCCA 57.335 34.615 0.00 0.00 0.00 3.86
1876 6453 9.944376 TTTCTATTTACATGACCATATAGCTCC 57.056 33.333 0.00 0.00 0.00 4.70
1928 6505 3.217599 TCGAGTCCAATCGAGACAAAG 57.782 47.619 6.13 0.00 46.20 2.77
1953 6530 6.959639 AAGACAATACGGCCAAATTATCAT 57.040 33.333 2.24 0.00 0.00 2.45
1980 6557 8.739039 TCCGTAAATTTGATCAAATGAATGAGT 58.261 29.630 29.52 12.80 40.57 3.41
2004 6581 0.816373 GTGAACGGAGGGAGTAGTCC 59.184 60.000 8.22 8.22 43.05 3.85
2006 6583 2.305858 AAGTGAACGGAGGGAGTAGT 57.694 50.000 0.00 0.00 0.00 2.73
2007 6584 3.679824 AAAAGTGAACGGAGGGAGTAG 57.320 47.619 0.00 0.00 0.00 2.57
2009 6586 5.247792 ACTTATAAAAGTGAACGGAGGGAGT 59.752 40.000 0.00 0.00 44.40 3.85
2010 6587 5.731591 ACTTATAAAAGTGAACGGAGGGAG 58.268 41.667 0.00 0.00 44.40 4.30
2011 6588 5.622914 CGACTTATAAAAGTGAACGGAGGGA 60.623 44.000 0.00 0.00 46.09 4.20
2012 6589 4.565564 CGACTTATAAAAGTGAACGGAGGG 59.434 45.833 0.00 0.00 46.09 4.30
2013 6590 4.032558 GCGACTTATAAAAGTGAACGGAGG 59.967 45.833 0.00 0.00 46.09 4.30
2016 6593 3.241868 CCGCGACTTATAAAAGTGAACGG 60.242 47.826 8.23 2.82 46.09 4.44
2017 6594 3.609373 TCCGCGACTTATAAAAGTGAACG 59.391 43.478 8.23 0.00 46.09 3.95
2018 6595 4.492085 GCTCCGCGACTTATAAAAGTGAAC 60.492 45.833 8.23 0.00 46.09 3.18
2019 6596 3.615496 GCTCCGCGACTTATAAAAGTGAA 59.385 43.478 8.23 0.00 46.09 3.18
2021 6598 2.927477 TGCTCCGCGACTTATAAAAGTG 59.073 45.455 8.23 0.00 46.09 3.16
2023 6600 4.593597 TTTGCTCCGCGACTTATAAAAG 57.406 40.909 8.23 0.00 38.77 2.27
2024 6601 5.554822 ATTTTGCTCCGCGACTTATAAAA 57.445 34.783 8.23 7.96 0.00 1.52
2027 6604 5.813672 ACTAAATTTTGCTCCGCGACTTATA 59.186 36.000 8.23 0.00 0.00 0.98
2028 6605 4.634443 ACTAAATTTTGCTCCGCGACTTAT 59.366 37.500 8.23 0.00 0.00 1.73
2029 6606 3.998341 ACTAAATTTTGCTCCGCGACTTA 59.002 39.130 8.23 0.00 0.00 2.24
2030 6607 2.812011 ACTAAATTTTGCTCCGCGACTT 59.188 40.909 8.23 0.00 0.00 3.01
2031 6608 2.423577 ACTAAATTTTGCTCCGCGACT 58.576 42.857 8.23 0.00 0.00 4.18
2032 6609 2.894307 ACTAAATTTTGCTCCGCGAC 57.106 45.000 8.23 0.00 0.00 5.19
2033 6610 3.327626 TGTACTAAATTTTGCTCCGCGA 58.672 40.909 8.23 0.00 0.00 5.87
2036 6613 5.220228 CGAGTCTGTACTAAATTTTGCTCCG 60.220 44.000 0.00 0.00 35.56 4.63
2039 6616 5.238583 AGCGAGTCTGTACTAAATTTTGCT 58.761 37.500 0.00 0.00 35.56 3.91
2040 6617 5.446073 GGAGCGAGTCTGTACTAAATTTTGC 60.446 44.000 0.00 0.00 35.56 3.68
2041 6618 5.220228 CGGAGCGAGTCTGTACTAAATTTTG 60.220 44.000 0.00 0.00 35.56 2.44
2043 6620 4.082354 ACGGAGCGAGTCTGTACTAAATTT 60.082 41.667 0.00 0.00 43.56 1.82
2045 6622 3.015327 ACGGAGCGAGTCTGTACTAAAT 58.985 45.455 0.00 0.00 43.56 1.40
2046 6623 2.417933 GACGGAGCGAGTCTGTACTAAA 59.582 50.000 0.01 0.00 45.55 1.85
2049 6626 1.360194 CGACGGAGCGAGTCTGTACT 61.360 60.000 0.01 0.00 45.55 2.73
2051 6628 2.747822 GCGACGGAGCGAGTCTGTA 61.748 63.158 0.00 0.00 45.55 2.74
2061 6638 1.438710 CTTTTTGTGCGCGACGGAG 60.439 57.895 12.10 0.00 0.00 4.63
2063 6640 2.003443 CACTTTTTGTGCGCGACGG 61.003 57.895 12.10 0.00 40.06 4.79
2064 6641 3.498726 CACTTTTTGTGCGCGACG 58.501 55.556 12.10 0.00 40.06 5.12
2075 6652 6.098982 TGGGAATAAATGGACAACACACTTTT 59.901 34.615 0.00 0.00 0.00 2.27
2086 6663 3.951680 ACCGACATTGGGAATAAATGGAC 59.048 43.478 1.66 0.00 38.98 4.02
2101 6678 1.885163 GAAGTGTCCCCGACCGACAT 61.885 60.000 3.11 0.00 41.99 3.06
2118 6707 2.116238 GCTACCATGTCCCCTACTGAA 58.884 52.381 0.00 0.00 0.00 3.02
2166 6946 2.023598 AGGGAGAGATGTGGATGAGTCA 60.024 50.000 0.00 0.00 0.00 3.41
2176 6956 1.134580 CAATGTGCGAGGGAGAGATGT 60.135 52.381 0.00 0.00 0.00 3.06
2209 8090 4.821589 GGTGAGAGAAGGCGCCGG 62.822 72.222 23.20 0.00 0.00 6.13
2210 8091 4.821589 GGGTGAGAGAAGGCGCCG 62.822 72.222 23.20 0.00 35.54 6.46
2217 8098 3.691342 CCGGCGTGGGTGAGAGAA 61.691 66.667 6.01 0.00 0.00 2.87
2243 8391 3.535962 CAGGCGAGGGAGGAGCTC 61.536 72.222 4.71 4.71 0.00 4.09
2264 8412 4.344865 GAGGGAAAGGGCGTGGCA 62.345 66.667 0.00 0.00 0.00 4.92
2297 8446 2.362077 GGAGATGTGAGAGGAAGAGAGC 59.638 54.545 0.00 0.00 0.00 4.09
2363 8514 3.402186 TTGAGCACCACCACTCAAG 57.598 52.632 1.49 0.00 45.48 3.02
2372 8523 1.059098 ACTCCACAGATTGAGCACCA 58.941 50.000 0.00 0.00 31.65 4.17
2386 8537 2.281970 CCAGCAGCAGCAACTCCA 60.282 61.111 3.17 0.00 45.49 3.86
2447 8712 5.696724 CCAACATCTTCACTCGAAACTAACT 59.303 40.000 0.00 0.00 0.00 2.24
2458 8723 5.324409 TGGCTTATTTCCAACATCTTCACT 58.676 37.500 0.00 0.00 0.00 3.41
2560 9666 2.690326 GACACGCCCATACATGTCC 58.310 57.895 0.00 0.00 36.31 4.02
2606 10359 2.961721 ACTGACGCACGCACACAG 60.962 61.111 0.00 0.00 35.14 3.66
2629 10396 1.542472 ACACACACATGCACATCCATG 59.458 47.619 0.00 0.94 46.19 3.66
2634 10401 2.416901 TGCACACACACATGCACAT 58.583 47.368 0.00 0.00 46.63 3.21
2643 10410 0.865111 GCGTGTTAGATGCACACACA 59.135 50.000 16.32 4.05 44.14 3.72
2653 10420 1.136305 GCCCTACATCTGCGTGTTAGA 59.864 52.381 0.00 0.00 33.62 2.10
2656 10423 1.137086 CTAGCCCTACATCTGCGTGTT 59.863 52.381 0.00 0.00 33.62 3.32


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.