Multiple sequence alignment - TraesCS3A01G449600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G449600 chr3A 100.000 2384 0 0 1 2384 688908505 688906122 0.000000e+00 4403
1 TraesCS3A01G449600 chr3A 91.352 821 39 18 764 1573 688915889 688915090 0.000000e+00 1094
2 TraesCS3A01G449600 chr3A 88.746 702 53 15 704 1384 688899093 688898397 0.000000e+00 835
3 TraesCS3A01G449600 chr3A 86.612 605 62 11 795 1384 688987045 688986445 0.000000e+00 651
4 TraesCS3A01G449600 chr3A 86.016 615 70 9 785 1384 688965113 688964500 0.000000e+00 645
5 TraesCS3A01G449600 chr3A 98.204 167 3 0 326 492 208457088 208457254 2.320000e-75 292
6 TraesCS3A01G449600 chr3A 95.604 182 7 1 329 510 1759701 1759881 8.340000e-75 291
7 TraesCS3A01G449600 chr3A 88.115 244 28 1 2046 2289 688914748 688914506 3.000000e-74 289
8 TraesCS3A01G449600 chr3A 90.476 126 12 0 1607 1732 688915006 688914881 1.470000e-37 167
9 TraesCS3A01G449600 chr3D 87.515 825 77 19 764 1574 552424829 552424017 0.000000e+00 929
10 TraesCS3A01G449600 chr3D 86.705 880 58 21 723 1574 552416987 552416139 0.000000e+00 922
11 TraesCS3A01G449600 chr3D 86.876 701 64 16 703 1384 552289562 552288871 0.000000e+00 760
12 TraesCS3A01G449600 chr3D 85.667 607 67 13 795 1384 552609841 552609238 2.600000e-174 621
13 TraesCS3A01G449600 chr3D 85.460 619 57 22 795 1384 552576291 552575677 4.360000e-172 614
14 TraesCS3A01G449600 chr3D 86.826 334 38 6 1574 1905 552423986 552423657 3.740000e-98 368
15 TraesCS3A01G449600 chr3D 90.984 244 22 0 2046 2289 552415808 552415565 1.770000e-86 329
16 TraesCS3A01G449600 chr3D 85.163 337 26 5 1574 1905 552416108 552415791 8.220000e-85 324
17 TraesCS3A01G449600 chr3D 89.344 244 23 2 2046 2289 552423674 552423434 1.070000e-78 303
18 TraesCS3A01G449600 chr3D 92.708 192 12 2 311 501 23085026 23084836 2.330000e-70 276
19 TraesCS3A01G449600 chr3D 89.091 220 19 4 491 705 552289822 552289603 3.910000e-68 268
20 TraesCS3A01G449600 chr3D 92.262 168 9 3 1893 2058 320837496 320837331 3.960000e-58 235
21 TraesCS3A01G449600 chr3D 94.483 145 7 1 1904 2047 608403823 608403679 3.080000e-54 222
22 TraesCS3A01G449600 chr3B 87.623 816 56 24 779 1574 732857415 732856625 0.000000e+00 905
23 TraesCS3A01G449600 chr3B 87.834 674 64 7 769 1428 732845769 732845100 0.000000e+00 774
24 TraesCS3A01G449600 chr3B 85.596 722 64 25 701 1384 732841749 732841030 0.000000e+00 721
25 TraesCS3A01G449600 chr3B 84.119 636 73 15 754 1372 733270851 733271475 7.340000e-165 590
26 TraesCS3A01G449600 chr3B 89.666 329 29 2 1574 1902 732856594 732856271 4.740000e-112 414
27 TraesCS3A01G449600 chr3B 90.119 253 23 2 2045 2297 732844472 732844222 6.350000e-86 327
28 TraesCS3A01G449600 chr3B 87.255 204 17 7 493 691 732846229 732846030 8.580000e-55 224
29 TraesCS3A01G449600 chr3B 79.878 328 31 18 1420 1720 732844919 732844600 8.640000e-50 207
30 TraesCS3A01G449600 chr3B 84.817 191 26 3 31 219 732846566 732846377 3.130000e-44 189
31 TraesCS3A01G449600 chr6B 98.795 166 2 0 329 494 718313674 718313839 1.790000e-76 296
32 TraesCS3A01G449600 chr7A 98.788 165 2 0 328 492 66252932 66252768 6.440000e-76 294
33 TraesCS3A01G449600 chr7A 97.633 169 4 0 324 492 47626469 47626301 8.340000e-75 291
34 TraesCS3A01G449600 chr7A 93.122 189 12 1 305 492 70752895 70752707 2.330000e-70 276
35 TraesCS3A01G449600 chr4B 97.633 169 4 0 324 492 658178157 658178325 8.340000e-75 291
36 TraesCS3A01G449600 chr2A 95.580 181 6 2 313 492 709834343 709834522 3.000000e-74 289
37 TraesCS3A01G449600 chr7B 97.203 143 3 1 1903 2044 233227153 233227295 8.520000e-60 241
38 TraesCS3A01G449600 chr6D 91.228 171 11 4 1880 2048 328906110 328906278 1.840000e-56 230
39 TraesCS3A01G449600 chr2B 95.205 146 6 1 1904 2048 756829089 756828944 1.840000e-56 230
40 TraesCS3A01G449600 chr5D 93.548 155 7 3 1893 2045 181922955 181922802 6.630000e-56 228
41 TraesCS3A01G449600 chr4D 94.040 151 7 2 1903 2052 456565426 456565575 6.630000e-56 228
42 TraesCS3A01G449600 chr7D 90.533 169 13 3 1898 2063 260894105 260893937 1.110000e-53 220
43 TraesCS3A01G449600 chr2D 90.303 165 14 2 1882 2045 342876881 342877044 5.160000e-52 215


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G449600 chr3A 688906122 688908505 2383 True 4403.000000 4403 100.000000 1 2384 1 chr3A.!!$R2 2383
1 TraesCS3A01G449600 chr3A 688898397 688899093 696 True 835.000000 835 88.746000 704 1384 1 chr3A.!!$R1 680
2 TraesCS3A01G449600 chr3A 688986445 688987045 600 True 651.000000 651 86.612000 795 1384 1 chr3A.!!$R4 589
3 TraesCS3A01G449600 chr3A 688964500 688965113 613 True 645.000000 645 86.016000 785 1384 1 chr3A.!!$R3 599
4 TraesCS3A01G449600 chr3A 688914506 688915889 1383 True 516.666667 1094 89.981000 764 2289 3 chr3A.!!$R5 1525
5 TraesCS3A01G449600 chr3D 552609238 552609841 603 True 621.000000 621 85.667000 795 1384 1 chr3D.!!$R4 589
6 TraesCS3A01G449600 chr3D 552575677 552576291 614 True 614.000000 614 85.460000 795 1384 1 chr3D.!!$R3 589
7 TraesCS3A01G449600 chr3D 552423434 552424829 1395 True 533.333333 929 87.895000 764 2289 3 chr3D.!!$R8 1525
8 TraesCS3A01G449600 chr3D 552415565 552416987 1422 True 525.000000 922 87.617333 723 2289 3 chr3D.!!$R7 1566
9 TraesCS3A01G449600 chr3D 552288871 552289822 951 True 514.000000 760 87.983500 491 1384 2 chr3D.!!$R6 893
10 TraesCS3A01G449600 chr3B 732856271 732857415 1144 True 659.500000 905 88.644500 779 1902 2 chr3B.!!$R2 1123
11 TraesCS3A01G449600 chr3B 733270851 733271475 624 False 590.000000 590 84.119000 754 1372 1 chr3B.!!$F1 618
12 TraesCS3A01G449600 chr3B 732841030 732846566 5536 True 407.000000 774 85.916500 31 2297 6 chr3B.!!$R1 2266

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
898 1225 0.319555 CACGGTGTGGATGAAGTCGT 60.32 55.0 0.0 0.0 0.0 4.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2317 6860 0.033796 CATGGACAGGTGGGCTCAAT 60.034 55.0 0.0 0.0 0.0 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 6.980593 TCGGAATTGTTCATTTTCTGTCATT 58.019 32.000 0.00 0.00 0.00 2.57
46 47 6.862608 TCGGAATTGTTCATTTTCTGTCATTG 59.137 34.615 0.00 0.00 0.00 2.82
49 50 8.866956 GGAATTGTTCATTTTCTGTCATTGATC 58.133 33.333 0.00 0.00 0.00 2.92
69 70 1.066257 AAGCAGCCGTTTGTGCAAG 59.934 52.632 0.00 0.00 42.47 4.01
75 76 1.066257 CCGTTTGTGCAAGCAGCTT 59.934 52.632 0.21 0.21 45.94 3.74
76 77 0.528249 CCGTTTGTGCAAGCAGCTTT 60.528 50.000 4.38 0.00 45.94 3.51
77 78 1.280066 CGTTTGTGCAAGCAGCTTTT 58.720 45.000 4.38 0.00 45.94 2.27
78 79 1.660104 CGTTTGTGCAAGCAGCTTTTT 59.340 42.857 4.38 0.00 45.94 1.94
138 139 6.775629 ACCAAAACCACAGCTTCTTATTCTTA 59.224 34.615 0.00 0.00 0.00 2.10
172 173 4.236935 CATGTGTGGATTTAAAGTGGTGC 58.763 43.478 0.00 0.00 0.00 5.01
210 212 2.242572 CGATCGCTGGCCTGACATG 61.243 63.158 14.77 0.00 0.00 3.21
213 253 1.332889 ATCGCTGGCCTGACATGAGA 61.333 55.000 14.77 2.72 0.00 3.27
216 256 0.321919 GCTGGCCTGACATGAGACAA 60.322 55.000 14.77 0.00 0.00 3.18
233 273 5.523916 TGAGACAAGGAAAACGAGAGAAAAG 59.476 40.000 0.00 0.00 0.00 2.27
234 274 5.429130 AGACAAGGAAAACGAGAGAAAAGT 58.571 37.500 0.00 0.00 0.00 2.66
251 291 3.555324 TGAACTGGCCCGACTGCA 61.555 61.111 0.00 0.00 0.00 4.41
252 292 2.045926 GAACTGGCCCGACTGCAT 60.046 61.111 0.00 0.00 0.00 3.96
253 293 1.220749 GAACTGGCCCGACTGCATA 59.779 57.895 0.00 0.00 0.00 3.14
254 294 0.392461 GAACTGGCCCGACTGCATAA 60.392 55.000 0.00 0.00 0.00 1.90
298 339 4.721776 AGTACCTATCCTTCCATGAGCAAA 59.278 41.667 0.00 0.00 0.00 3.68
329 370 4.336433 GGCTACATGCATGCTTTCTTTCTA 59.664 41.667 26.53 7.11 45.15 2.10
330 371 5.269313 GCTACATGCATGCTTTCTTTCTAC 58.731 41.667 26.53 0.00 42.31 2.59
331 372 5.065731 GCTACATGCATGCTTTCTTTCTACT 59.934 40.000 26.53 4.76 42.31 2.57
332 373 5.557891 ACATGCATGCTTTCTTTCTACTC 57.442 39.130 26.53 0.00 0.00 2.59
333 374 4.397417 ACATGCATGCTTTCTTTCTACTCC 59.603 41.667 26.53 0.00 0.00 3.85
334 375 3.347216 TGCATGCTTTCTTTCTACTCCC 58.653 45.455 20.33 0.00 0.00 4.30
335 376 3.009473 TGCATGCTTTCTTTCTACTCCCT 59.991 43.478 20.33 0.00 0.00 4.20
336 377 3.625313 GCATGCTTTCTTTCTACTCCCTC 59.375 47.826 11.37 0.00 0.00 4.30
337 378 3.983044 TGCTTTCTTTCTACTCCCTCC 57.017 47.619 0.00 0.00 0.00 4.30
338 379 2.233922 TGCTTTCTTTCTACTCCCTCCG 59.766 50.000 0.00 0.00 0.00 4.63
339 380 2.234168 GCTTTCTTTCTACTCCCTCCGT 59.766 50.000 0.00 0.00 0.00 4.69
340 381 3.306849 GCTTTCTTTCTACTCCCTCCGTT 60.307 47.826 0.00 0.00 0.00 4.44
341 382 4.496360 CTTTCTTTCTACTCCCTCCGTTC 58.504 47.826 0.00 0.00 0.00 3.95
342 383 2.454538 TCTTTCTACTCCCTCCGTTCC 58.545 52.381 0.00 0.00 0.00 3.62
343 384 2.042706 TCTTTCTACTCCCTCCGTTCCT 59.957 50.000 0.00 0.00 0.00 3.36
344 385 3.267812 TCTTTCTACTCCCTCCGTTCCTA 59.732 47.826 0.00 0.00 0.00 2.94
345 386 3.744940 TTCTACTCCCTCCGTTCCTAA 57.255 47.619 0.00 0.00 0.00 2.69
346 387 3.744940 TCTACTCCCTCCGTTCCTAAA 57.255 47.619 0.00 0.00 0.00 1.85
347 388 4.261411 TCTACTCCCTCCGTTCCTAAAT 57.739 45.455 0.00 0.00 0.00 1.40
348 389 5.393068 TCTACTCCCTCCGTTCCTAAATA 57.607 43.478 0.00 0.00 0.00 1.40
349 390 5.136105 TCTACTCCCTCCGTTCCTAAATAC 58.864 45.833 0.00 0.00 0.00 1.89
350 391 3.991683 ACTCCCTCCGTTCCTAAATACT 58.008 45.455 0.00 0.00 0.00 2.12
351 392 4.359996 ACTCCCTCCGTTCCTAAATACTT 58.640 43.478 0.00 0.00 0.00 2.24
352 393 4.161754 ACTCCCTCCGTTCCTAAATACTTG 59.838 45.833 0.00 0.00 0.00 3.16
353 394 4.098894 TCCCTCCGTTCCTAAATACTTGT 58.901 43.478 0.00 0.00 0.00 3.16
354 395 4.161001 TCCCTCCGTTCCTAAATACTTGTC 59.839 45.833 0.00 0.00 0.00 3.18
355 396 4.161754 CCCTCCGTTCCTAAATACTTGTCT 59.838 45.833 0.00 0.00 0.00 3.41
356 397 5.338137 CCCTCCGTTCCTAAATACTTGTCTT 60.338 44.000 0.00 0.00 0.00 3.01
357 398 6.171213 CCTCCGTTCCTAAATACTTGTCTTT 58.829 40.000 0.00 0.00 0.00 2.52
358 399 6.313164 CCTCCGTTCCTAAATACTTGTCTTTC 59.687 42.308 0.00 0.00 0.00 2.62
359 400 7.001099 TCCGTTCCTAAATACTTGTCTTTCT 57.999 36.000 0.00 0.00 0.00 2.52
360 401 8.125978 TCCGTTCCTAAATACTTGTCTTTCTA 57.874 34.615 0.00 0.00 0.00 2.10
361 402 8.248945 TCCGTTCCTAAATACTTGTCTTTCTAG 58.751 37.037 0.00 0.00 0.00 2.43
362 403 7.491696 CCGTTCCTAAATACTTGTCTTTCTAGG 59.508 40.741 0.00 0.00 0.00 3.02
363 404 7.010275 CGTTCCTAAATACTTGTCTTTCTAGGC 59.990 40.741 0.00 0.00 0.00 3.93
364 405 7.490657 TCCTAAATACTTGTCTTTCTAGGCA 57.509 36.000 0.00 0.00 33.22 4.75
365 406 8.090788 TCCTAAATACTTGTCTTTCTAGGCAT 57.909 34.615 0.00 0.00 35.56 4.40
366 407 8.548877 TCCTAAATACTTGTCTTTCTAGGCATT 58.451 33.333 0.00 0.00 35.56 3.56
367 408 9.178758 CCTAAATACTTGTCTTTCTAGGCATTT 57.821 33.333 0.00 0.00 35.56 2.32
369 410 8.635765 AAATACTTGTCTTTCTAGGCATTTCA 57.364 30.769 0.00 0.00 35.56 2.69
370 411 8.635765 AATACTTGTCTTTCTAGGCATTTCAA 57.364 30.769 0.00 0.00 35.56 2.69
371 412 6.319141 ACTTGTCTTTCTAGGCATTTCAAC 57.681 37.500 0.00 0.00 35.56 3.18
372 413 5.827797 ACTTGTCTTTCTAGGCATTTCAACA 59.172 36.000 0.00 0.00 35.56 3.33
373 414 6.321181 ACTTGTCTTTCTAGGCATTTCAACAA 59.679 34.615 0.00 0.00 35.56 2.83
374 415 6.317789 TGTCTTTCTAGGCATTTCAACAAG 57.682 37.500 0.00 0.00 29.10 3.16
375 416 5.827797 TGTCTTTCTAGGCATTTCAACAAGT 59.172 36.000 0.00 0.00 29.10 3.16
376 417 6.145535 GTCTTTCTAGGCATTTCAACAAGTG 58.854 40.000 0.00 0.00 0.00 3.16
377 418 6.017109 GTCTTTCTAGGCATTTCAACAAGTGA 60.017 38.462 0.00 0.00 0.00 3.41
378 419 5.689383 TTCTAGGCATTTCAACAAGTGAC 57.311 39.130 0.00 0.00 35.39 3.67
379 420 4.973168 TCTAGGCATTTCAACAAGTGACT 58.027 39.130 0.00 0.00 40.60 3.41
380 421 6.109156 TCTAGGCATTTCAACAAGTGACTA 57.891 37.500 0.00 0.00 38.51 2.59
381 422 5.932303 TCTAGGCATTTCAACAAGTGACTAC 59.068 40.000 0.00 0.00 38.51 2.73
382 423 4.460263 AGGCATTTCAACAAGTGACTACA 58.540 39.130 0.00 0.00 35.84 2.74
383 424 5.072741 AGGCATTTCAACAAGTGACTACAT 58.927 37.500 0.00 0.00 35.84 2.29
384 425 6.237901 AGGCATTTCAACAAGTGACTACATA 58.762 36.000 0.00 0.00 35.84 2.29
385 426 6.149474 AGGCATTTCAACAAGTGACTACATAC 59.851 38.462 0.00 0.00 35.84 2.39
386 427 6.015504 GCATTTCAACAAGTGACTACATACG 58.984 40.000 0.00 0.00 35.39 3.06
387 428 6.128661 GCATTTCAACAAGTGACTACATACGA 60.129 38.462 0.00 0.00 35.39 3.43
388 429 7.570507 GCATTTCAACAAGTGACTACATACGAA 60.571 37.037 0.00 0.00 35.39 3.85
389 430 7.402811 TTTCAACAAGTGACTACATACGAAG 57.597 36.000 0.00 0.00 35.39 3.79
390 431 4.921515 TCAACAAGTGACTACATACGAAGC 59.078 41.667 0.00 0.00 0.00 3.86
391 432 4.514781 ACAAGTGACTACATACGAAGCA 57.485 40.909 0.00 0.00 0.00 3.91
392 433 4.878439 ACAAGTGACTACATACGAAGCAA 58.122 39.130 0.00 0.00 0.00 3.91
393 434 5.294356 ACAAGTGACTACATACGAAGCAAA 58.706 37.500 0.00 0.00 0.00 3.68
394 435 5.756347 ACAAGTGACTACATACGAAGCAAAA 59.244 36.000 0.00 0.00 0.00 2.44
395 436 6.426937 ACAAGTGACTACATACGAAGCAAAAT 59.573 34.615 0.00 0.00 0.00 1.82
396 437 6.408858 AGTGACTACATACGAAGCAAAATG 57.591 37.500 0.00 0.00 0.00 2.32
397 438 6.163476 AGTGACTACATACGAAGCAAAATGA 58.837 36.000 0.00 0.00 0.00 2.57
398 439 6.311445 AGTGACTACATACGAAGCAAAATGAG 59.689 38.462 0.00 0.00 0.00 2.90
399 440 6.090898 GTGACTACATACGAAGCAAAATGAGT 59.909 38.462 0.00 0.00 0.00 3.41
400 441 6.090763 TGACTACATACGAAGCAAAATGAGTG 59.909 38.462 0.00 0.00 0.00 3.51
401 442 6.163476 ACTACATACGAAGCAAAATGAGTGA 58.837 36.000 0.00 0.00 0.00 3.41
402 443 5.940192 ACATACGAAGCAAAATGAGTGAA 57.060 34.783 0.00 0.00 0.00 3.18
403 444 6.500684 ACATACGAAGCAAAATGAGTGAAT 57.499 33.333 0.00 0.00 0.00 2.57
404 445 6.546395 ACATACGAAGCAAAATGAGTGAATC 58.454 36.000 0.00 0.00 0.00 2.52
405 446 6.372659 ACATACGAAGCAAAATGAGTGAATCT 59.627 34.615 0.00 0.00 0.00 2.40
406 447 7.549134 ACATACGAAGCAAAATGAGTGAATCTA 59.451 33.333 0.00 0.00 0.00 1.98
407 448 6.170675 ACGAAGCAAAATGAGTGAATCTAC 57.829 37.500 0.00 0.00 0.00 2.59
408 449 5.700832 ACGAAGCAAAATGAGTGAATCTACA 59.299 36.000 0.00 0.00 0.00 2.74
409 450 6.017933 CGAAGCAAAATGAGTGAATCTACAC 58.982 40.000 0.00 0.00 40.60 2.90
451 492 6.073327 ACATCCGTATGTAGTAGTCATGTG 57.927 41.667 0.00 0.00 44.66 3.21
452 493 5.826208 ACATCCGTATGTAGTAGTCATGTGA 59.174 40.000 0.00 0.00 44.66 3.58
453 494 6.320418 ACATCCGTATGTAGTAGTCATGTGAA 59.680 38.462 0.00 0.00 44.66 3.18
454 495 6.762702 TCCGTATGTAGTAGTCATGTGAAA 57.237 37.500 0.00 0.00 0.00 2.69
455 496 7.342769 TCCGTATGTAGTAGTCATGTGAAAT 57.657 36.000 0.00 0.00 0.00 2.17
456 497 7.200455 TCCGTATGTAGTAGTCATGTGAAATG 58.800 38.462 0.00 0.00 0.00 2.32
457 498 6.978659 CCGTATGTAGTAGTCATGTGAAATGT 59.021 38.462 0.00 0.00 0.00 2.71
458 499 7.167635 CCGTATGTAGTAGTCATGTGAAATGTC 59.832 40.741 0.00 0.00 0.00 3.06
459 500 7.915923 CGTATGTAGTAGTCATGTGAAATGTCT 59.084 37.037 0.00 0.00 0.00 3.41
462 503 8.575649 TGTAGTAGTCATGTGAAATGTCTAGA 57.424 34.615 0.00 0.00 0.00 2.43
463 504 9.020731 TGTAGTAGTCATGTGAAATGTCTAGAA 57.979 33.333 0.00 0.00 0.00 2.10
464 505 9.856488 GTAGTAGTCATGTGAAATGTCTAGAAA 57.144 33.333 0.00 0.00 0.00 2.52
466 507 9.778741 AGTAGTCATGTGAAATGTCTAGAAAAA 57.221 29.630 0.00 0.00 0.00 1.94
467 508 9.813080 GTAGTCATGTGAAATGTCTAGAAAAAC 57.187 33.333 0.00 0.00 0.00 2.43
468 509 8.450578 AGTCATGTGAAATGTCTAGAAAAACA 57.549 30.769 0.00 0.00 0.00 2.83
469 510 8.902806 AGTCATGTGAAATGTCTAGAAAAACAA 58.097 29.630 0.00 0.00 0.00 2.83
470 511 9.515020 GTCATGTGAAATGTCTAGAAAAACAAA 57.485 29.630 0.00 0.00 0.00 2.83
486 527 8.520351 AGAAAAACAAATATTTAGGAACGGAGG 58.480 33.333 0.00 0.00 0.00 4.30
487 528 6.769134 AAACAAATATTTAGGAACGGAGGG 57.231 37.500 0.00 0.00 0.00 4.30
488 529 5.703730 ACAAATATTTAGGAACGGAGGGA 57.296 39.130 0.00 0.00 0.00 4.20
489 530 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
496 537 1.382692 GGAACGGAGGGAGTACTCGG 61.383 65.000 16.56 5.98 41.81 4.63
543 584 7.913789 TGACATATATGGGTCCAAATAGTACC 58.086 38.462 16.96 0.00 33.09 3.34
549 590 3.054948 TGGGTCCAAATAGTACCTTTCGG 60.055 47.826 0.00 0.00 33.59 4.30
658 712 7.577303 ACTATTGGATGAATCACTAATGGTGT 58.423 34.615 8.84 3.10 45.50 4.16
701 757 8.732413 CTCGTACTACAGTACTAGTAGATGAG 57.268 42.308 25.96 22.97 46.43 2.90
850 1174 1.739338 GCCGTCCTCCGATGATCACT 61.739 60.000 0.00 0.00 39.56 3.41
898 1225 0.319555 CACGGTGTGGATGAAGTCGT 60.320 55.000 0.00 0.00 0.00 4.34
1193 5654 4.489771 CAGGATGGACGGGTGCCC 62.490 72.222 0.00 0.00 0.00 5.36
1480 5957 6.966632 TCTGACGAACAATTCAGAAGTTTTTG 59.033 34.615 0.00 0.00 44.19 2.44
1481 5958 5.514914 TGACGAACAATTCAGAAGTTTTTGC 59.485 36.000 0.00 0.00 0.00 3.68
1484 5961 4.751767 ACAATTCAGAAGTTTTTGCCCA 57.248 36.364 0.00 0.00 0.00 5.36
1485 5962 4.696455 ACAATTCAGAAGTTTTTGCCCAG 58.304 39.130 0.00 0.00 0.00 4.45
1486 5963 4.405358 ACAATTCAGAAGTTTTTGCCCAGA 59.595 37.500 0.00 0.00 0.00 3.86
1487 5964 5.104982 ACAATTCAGAAGTTTTTGCCCAGAA 60.105 36.000 0.00 0.00 0.00 3.02
1488 5965 5.813513 ATTCAGAAGTTTTTGCCCAGAAT 57.186 34.783 0.00 0.00 0.00 2.40
1489 5966 4.589216 TCAGAAGTTTTTGCCCAGAATG 57.411 40.909 0.00 0.00 0.00 2.67
1490 5967 4.214310 TCAGAAGTTTTTGCCCAGAATGA 58.786 39.130 0.00 0.00 39.69 2.57
1491 5968 4.279169 TCAGAAGTTTTTGCCCAGAATGAG 59.721 41.667 0.00 0.00 39.69 2.90
1493 5976 3.243359 AGTTTTTGCCCAGAATGAGGA 57.757 42.857 0.00 0.00 39.69 3.71
1498 5981 1.288188 TGCCCAGAATGAGGACATGA 58.712 50.000 0.00 0.00 39.69 3.07
1500 5983 2.242965 TGCCCAGAATGAGGACATGATT 59.757 45.455 0.00 0.00 39.69 2.57
1501 5984 2.621998 GCCCAGAATGAGGACATGATTG 59.378 50.000 0.00 0.00 39.69 2.67
1518 6002 4.808558 TGATTGCTCTTTTTGGTGTATGC 58.191 39.130 0.00 0.00 0.00 3.14
1519 6003 4.523943 TGATTGCTCTTTTTGGTGTATGCT 59.476 37.500 0.00 0.00 0.00 3.79
1521 6005 2.483877 TGCTCTTTTTGGTGTATGCTCG 59.516 45.455 0.00 0.00 0.00 5.03
1522 6006 2.742053 GCTCTTTTTGGTGTATGCTCGA 59.258 45.455 0.00 0.00 0.00 4.04
1523 6007 3.424962 GCTCTTTTTGGTGTATGCTCGAC 60.425 47.826 0.00 0.00 0.00 4.20
1524 6008 3.997021 CTCTTTTTGGTGTATGCTCGACT 59.003 43.478 0.00 0.00 0.00 4.18
1525 6009 5.142061 TCTTTTTGGTGTATGCTCGACTA 57.858 39.130 0.00 0.00 0.00 2.59
1526 6010 4.927425 TCTTTTTGGTGTATGCTCGACTAC 59.073 41.667 0.00 0.00 0.00 2.73
1601 6136 4.258543 GGATGTGTTCGATTTCCAGGTTA 58.741 43.478 0.00 0.00 0.00 2.85
1604 6139 4.258543 TGTGTTCGATTTCCAGGTTATCC 58.741 43.478 0.00 0.00 0.00 2.59
1605 6140 3.308866 GTGTTCGATTTCCAGGTTATCCG 59.691 47.826 0.00 0.00 39.05 4.18
1631 6166 4.104102 TGTTATCCTCAGTTTGTGGGAGTT 59.896 41.667 0.00 0.00 32.20 3.01
1683 6218 9.027129 CAAATGTTAGCATATGAAACTCCAATG 57.973 33.333 6.97 3.77 34.39 2.82
1705 6240 5.416083 TGTAAGACTTTATGATCCCACACG 58.584 41.667 0.00 0.00 0.00 4.49
1714 6249 6.875948 TTATGATCCCACACGGAATAAATG 57.124 37.500 0.00 0.00 46.47 2.32
1724 6259 4.102524 ACACGGAATAAATGGAGAGGCATA 59.897 41.667 0.00 0.00 0.00 3.14
1810 6345 3.064820 ACAAAAACGTTAGCCAGTCACTG 59.935 43.478 0.00 0.00 0.00 3.66
1811 6346 2.614829 AAACGTTAGCCAGTCACTGT 57.385 45.000 0.00 0.00 0.00 3.55
1855 6396 2.098117 GCTATCGCACTGAAAATGCCTT 59.902 45.455 0.00 0.00 40.09 4.35
1860 6402 2.543445 CGCACTGAAAATGCCTTTCACA 60.543 45.455 6.91 1.91 46.80 3.58
1902 6445 2.029828 ACACCACAACTTCAACGCAAAA 60.030 40.909 0.00 0.00 0.00 2.44
1904 6447 3.060628 CACCACAACTTCAACGCAAAAAG 59.939 43.478 0.00 0.00 0.00 2.27
1905 6448 2.029124 CCACAACTTCAACGCAAAAAGC 59.971 45.455 0.00 0.00 40.87 3.51
1906 6449 2.665537 CACAACTTCAACGCAAAAAGCA 59.334 40.909 0.00 0.00 46.13 3.91
1907 6450 2.923020 ACAACTTCAACGCAAAAAGCAG 59.077 40.909 0.00 0.00 46.13 4.24
1908 6451 3.178267 CAACTTCAACGCAAAAAGCAGA 58.822 40.909 0.00 0.00 46.13 4.26
1909 6452 3.715628 ACTTCAACGCAAAAAGCAGAT 57.284 38.095 0.00 0.00 46.13 2.90
1910 6453 4.045636 ACTTCAACGCAAAAAGCAGATT 57.954 36.364 0.00 0.00 46.13 2.40
1911 6454 5.181690 ACTTCAACGCAAAAAGCAGATTA 57.818 34.783 0.00 0.00 46.13 1.75
1912 6455 5.587289 ACTTCAACGCAAAAAGCAGATTAA 58.413 33.333 0.00 0.00 46.13 1.40
1913 6456 5.687285 ACTTCAACGCAAAAAGCAGATTAAG 59.313 36.000 0.00 0.00 46.13 1.85
1914 6457 4.545610 TCAACGCAAAAAGCAGATTAAGG 58.454 39.130 0.00 0.00 46.13 2.69
1915 6458 2.946564 ACGCAAAAAGCAGATTAAGGC 58.053 42.857 0.00 0.00 46.13 4.35
1916 6459 2.295909 ACGCAAAAAGCAGATTAAGGCA 59.704 40.909 0.00 0.00 46.13 4.75
1917 6460 3.056607 ACGCAAAAAGCAGATTAAGGCAT 60.057 39.130 0.00 0.00 46.13 4.40
1918 6461 4.157656 ACGCAAAAAGCAGATTAAGGCATA 59.842 37.500 0.00 0.00 46.13 3.14
1919 6462 4.736793 CGCAAAAAGCAGATTAAGGCATAG 59.263 41.667 0.00 0.00 46.13 2.23
1920 6463 4.505556 GCAAAAAGCAGATTAAGGCATAGC 59.494 41.667 0.00 0.00 44.79 2.97
1921 6464 6.472055 GCAAAAAGCAGATTAAGGCATAGCC 61.472 44.000 0.00 0.00 46.53 3.93
1931 6474 1.451936 GGCATAGCCTAGTGGTGGG 59.548 63.158 0.00 0.00 46.69 4.61
1932 6475 1.054406 GGCATAGCCTAGTGGTGGGA 61.054 60.000 0.00 0.00 46.69 4.37
1933 6476 0.837272 GCATAGCCTAGTGGTGGGAA 59.163 55.000 0.00 0.00 35.27 3.97
1934 6477 1.202698 GCATAGCCTAGTGGTGGGAAG 60.203 57.143 0.00 0.00 35.27 3.46
1935 6478 1.417890 CATAGCCTAGTGGTGGGAAGG 59.582 57.143 0.00 0.00 35.27 3.46
1936 6479 0.326238 TAGCCTAGTGGTGGGAAGGG 60.326 60.000 0.00 0.00 35.27 3.95
1937 6480 2.680370 GCCTAGTGGTGGGAAGGGG 61.680 68.421 0.00 0.00 35.27 4.79
1938 6481 1.229853 CCTAGTGGTGGGAAGGGGT 60.230 63.158 0.00 0.00 0.00 4.95
1939 6482 0.845102 CCTAGTGGTGGGAAGGGGTT 60.845 60.000 0.00 0.00 0.00 4.11
1940 6483 0.328258 CTAGTGGTGGGAAGGGGTTG 59.672 60.000 0.00 0.00 0.00 3.77
1941 6484 0.104356 TAGTGGTGGGAAGGGGTTGA 60.104 55.000 0.00 0.00 0.00 3.18
1942 6485 0.776080 AGTGGTGGGAAGGGGTTGAT 60.776 55.000 0.00 0.00 0.00 2.57
1943 6486 0.611896 GTGGTGGGAAGGGGTTGATG 60.612 60.000 0.00 0.00 0.00 3.07
1944 6487 1.682344 GGTGGGAAGGGGTTGATGC 60.682 63.158 0.00 0.00 0.00 3.91
1945 6488 1.682344 GTGGGAAGGGGTTGATGCC 60.682 63.158 0.00 0.00 0.00 4.40
1946 6489 1.856873 TGGGAAGGGGTTGATGCCT 60.857 57.895 0.00 0.00 0.00 4.75
1947 6490 1.388133 GGGAAGGGGTTGATGCCTT 59.612 57.895 0.00 0.00 0.00 4.35
1948 6491 0.684479 GGGAAGGGGTTGATGCCTTC 60.684 60.000 0.00 0.00 38.23 3.46
1949 6492 2.887790 GAAGGGGTTGATGCCTTCC 58.112 57.895 0.00 0.00 34.40 3.46
1950 6493 0.684479 GAAGGGGTTGATGCCTTCCC 60.684 60.000 0.00 0.00 39.22 3.97
1951 6494 1.442886 AAGGGGTTGATGCCTTCCCA 61.443 55.000 0.00 0.00 41.51 4.37
1952 6495 1.682344 GGGGTTGATGCCTTCCCAC 60.682 63.158 0.00 0.00 41.51 4.61
1953 6496 1.682344 GGGTTGATGCCTTCCCACC 60.682 63.158 0.00 0.00 39.68 4.61
1954 6497 1.682344 GGTTGATGCCTTCCCACCC 60.682 63.158 0.00 0.00 0.00 4.61
1955 6498 1.076549 GTTGATGCCTTCCCACCCA 59.923 57.895 0.00 0.00 0.00 4.51
1956 6499 1.076549 TTGATGCCTTCCCACCCAC 59.923 57.895 0.00 0.00 0.00 4.61
1957 6500 2.043953 GATGCCTTCCCACCCACC 60.044 66.667 0.00 0.00 0.00 4.61
1958 6501 3.662117 GATGCCTTCCCACCCACCC 62.662 68.421 0.00 0.00 0.00 4.61
1960 6503 4.366684 GCCTTCCCACCCACCCAG 62.367 72.222 0.00 0.00 0.00 4.45
1961 6504 3.661648 CCTTCCCACCCACCCAGG 61.662 72.222 0.00 0.00 37.03 4.45
1962 6505 2.858974 CTTCCCACCCACCCAGGT 60.859 66.667 0.00 0.00 42.40 4.00
1963 6506 2.370403 TTCCCACCCACCCAGGTT 60.370 61.111 0.00 0.00 38.39 3.50
1964 6507 2.426305 CTTCCCACCCACCCAGGTTC 62.426 65.000 0.00 0.00 38.39 3.62
1965 6508 3.182263 CCCACCCACCCAGGTTCA 61.182 66.667 0.00 0.00 38.39 3.18
1966 6509 2.773527 CCCACCCACCCAGGTTCAA 61.774 63.158 0.00 0.00 38.39 2.69
1967 6510 1.228552 CCACCCACCCAGGTTCAAG 60.229 63.158 0.00 0.00 38.39 3.02
1968 6511 1.228552 CACCCACCCAGGTTCAAGG 60.229 63.158 0.00 0.00 38.39 3.61
1969 6512 2.283173 CCCACCCAGGTTCAAGGC 60.283 66.667 0.00 0.00 34.66 4.35
1970 6513 2.520458 CCACCCAGGTTCAAGGCA 59.480 61.111 0.00 0.00 0.00 4.75
1971 6514 1.077265 CCACCCAGGTTCAAGGCAT 59.923 57.895 0.00 0.00 0.00 4.40
1972 6515 1.252904 CCACCCAGGTTCAAGGCATG 61.253 60.000 0.00 0.00 0.00 4.06
1973 6516 1.077265 ACCCAGGTTCAAGGCATGG 59.923 57.895 0.00 0.00 37.52 3.66
1974 6517 1.077265 CCCAGGTTCAAGGCATGGT 59.923 57.895 0.00 0.00 36.19 3.55
1975 6518 0.331278 CCCAGGTTCAAGGCATGGTA 59.669 55.000 0.00 0.00 36.19 3.25
1976 6519 1.463674 CCAGGTTCAAGGCATGGTAC 58.536 55.000 0.00 0.00 33.58 3.34
1977 6520 1.004745 CCAGGTTCAAGGCATGGTACT 59.995 52.381 0.00 0.00 33.58 2.73
1978 6521 2.555227 CCAGGTTCAAGGCATGGTACTT 60.555 50.000 0.00 0.00 33.58 2.24
1979 6522 2.489329 CAGGTTCAAGGCATGGTACTTG 59.511 50.000 0.00 0.00 44.09 3.16
1980 6523 1.202348 GGTTCAAGGCATGGTACTTGC 59.798 52.381 11.43 11.43 42.82 4.01
1981 6524 1.885887 GTTCAAGGCATGGTACTTGCA 59.114 47.619 18.60 0.00 42.82 4.08
1982 6525 2.284754 TCAAGGCATGGTACTTGCAA 57.715 45.000 18.60 0.00 42.82 4.08
1983 6526 2.806434 TCAAGGCATGGTACTTGCAAT 58.194 42.857 18.60 7.66 42.82 3.56
1984 6527 3.164268 TCAAGGCATGGTACTTGCAATT 58.836 40.909 18.60 0.00 42.82 2.32
1985 6528 3.577848 TCAAGGCATGGTACTTGCAATTT 59.422 39.130 18.60 9.78 42.82 1.82
1986 6529 3.598019 AGGCATGGTACTTGCAATTTG 57.402 42.857 18.60 0.00 41.95 2.32
1987 6530 2.234414 AGGCATGGTACTTGCAATTTGG 59.766 45.455 18.60 0.00 41.95 3.28
1988 6531 2.620242 GCATGGTACTTGCAATTTGGG 58.380 47.619 14.01 0.00 39.90 4.12
1989 6532 2.677613 GCATGGTACTTGCAATTTGGGG 60.678 50.000 14.01 0.00 39.90 4.96
1990 6533 2.390225 TGGTACTTGCAATTTGGGGT 57.610 45.000 0.00 0.00 0.00 4.95
1991 6534 2.683768 TGGTACTTGCAATTTGGGGTT 58.316 42.857 0.00 0.00 0.00 4.11
1992 6535 2.366916 TGGTACTTGCAATTTGGGGTTG 59.633 45.455 0.00 0.00 0.00 3.77
1993 6536 2.367241 GGTACTTGCAATTTGGGGTTGT 59.633 45.455 0.00 0.00 0.00 3.32
1994 6537 3.181459 GGTACTTGCAATTTGGGGTTGTT 60.181 43.478 0.00 0.00 0.00 2.83
1995 6538 2.916640 ACTTGCAATTTGGGGTTGTTG 58.083 42.857 0.00 0.00 0.00 3.33
1996 6539 1.603326 CTTGCAATTTGGGGTTGTTGC 59.397 47.619 0.00 2.25 45.27 4.17
1997 6540 3.393472 GCAATTTGGGGTTGTTGCA 57.607 47.368 4.26 0.00 44.63 4.08
1998 6541 0.943673 GCAATTTGGGGTTGTTGCAC 59.056 50.000 4.26 0.00 44.63 4.57
1999 6542 1.592064 CAATTTGGGGTTGTTGCACC 58.408 50.000 0.00 0.00 35.88 5.01
2000 6543 1.134280 CAATTTGGGGTTGTTGCACCA 60.134 47.619 0.00 0.00 40.77 4.17
2002 6545 2.922162 TTGGGGTTGTTGCACCAAT 58.078 47.368 0.00 0.00 46.07 3.16
2003 6546 2.088104 TTGGGGTTGTTGCACCAATA 57.912 45.000 0.00 0.00 46.07 1.90
2004 6547 2.317371 TGGGGTTGTTGCACCAATAT 57.683 45.000 0.00 0.00 39.32 1.28
2005 6548 3.458044 TGGGGTTGTTGCACCAATATA 57.542 42.857 0.00 0.00 39.32 0.86
2006 6549 3.093057 TGGGGTTGTTGCACCAATATAC 58.907 45.455 0.00 0.00 39.32 1.47
2007 6550 2.429250 GGGGTTGTTGCACCAATATACC 59.571 50.000 0.00 0.00 38.79 2.73
2008 6551 2.098443 GGGTTGTTGCACCAATATACCG 59.902 50.000 0.00 0.00 38.79 4.02
2009 6552 2.750712 GGTTGTTGCACCAATATACCGT 59.249 45.455 0.00 0.00 36.73 4.83
2010 6553 3.940221 GGTTGTTGCACCAATATACCGTA 59.060 43.478 0.00 0.00 36.73 4.02
2011 6554 4.034742 GGTTGTTGCACCAATATACCGTAG 59.965 45.833 0.00 0.00 36.73 3.51
2012 6555 6.933063 GGTTGTTGCACCAATATACCGTAGG 61.933 48.000 0.00 0.00 45.93 3.18
2032 6575 3.520691 GGGGTTCCCTTACAGTCTTTT 57.479 47.619 7.87 0.00 41.34 2.27
2033 6576 3.840991 GGGGTTCCCTTACAGTCTTTTT 58.159 45.455 7.87 0.00 41.34 1.94
2034 6577 4.989277 GGGGTTCCCTTACAGTCTTTTTA 58.011 43.478 7.87 0.00 41.34 1.52
2035 6578 5.577100 GGGGTTCCCTTACAGTCTTTTTAT 58.423 41.667 7.87 0.00 41.34 1.40
2036 6579 6.014647 GGGGTTCCCTTACAGTCTTTTTATT 58.985 40.000 7.87 0.00 41.34 1.40
2037 6580 7.177184 GGGGTTCCCTTACAGTCTTTTTATTA 58.823 38.462 7.87 0.00 41.34 0.98
2038 6581 7.670979 GGGGTTCCCTTACAGTCTTTTTATTAA 59.329 37.037 7.87 0.00 41.34 1.40
2039 6582 9.081204 GGGTTCCCTTACAGTCTTTTTATTAAA 57.919 33.333 0.00 0.00 0.00 1.52
2100 6643 3.153919 TCAACATCAGCCTACCAAAACC 58.846 45.455 0.00 0.00 0.00 3.27
2102 6645 3.456380 ACATCAGCCTACCAAAACCAT 57.544 42.857 0.00 0.00 0.00 3.55
2105 6648 3.237268 TCAGCCTACCAAAACCATGTT 57.763 42.857 0.00 0.00 0.00 2.71
2125 6668 2.034066 TGCCACTGCCAGCCTTAC 59.966 61.111 0.00 0.00 36.33 2.34
2138 6681 4.624125 GCCAGCCTTACTAAACTCAGTCAT 60.624 45.833 0.00 0.00 0.00 3.06
2142 6685 7.040409 CCAGCCTTACTAAACTCAGTCATTTTT 60.040 37.037 0.00 0.00 0.00 1.94
2188 6731 2.000447 GTACAATGAGCGGAAGACCAC 59.000 52.381 0.00 0.00 35.59 4.16
2286 6829 5.514659 CCCTCCCAAAAGGTTGCAATAATTT 60.515 40.000 0.59 1.42 36.75 1.82
2289 6832 7.067496 TCCCAAAAGGTTGCAATAATTTACA 57.933 32.000 0.59 0.00 36.75 2.41
2290 6833 6.931840 TCCCAAAAGGTTGCAATAATTTACAC 59.068 34.615 0.59 0.00 36.75 2.90
2291 6834 6.708054 CCCAAAAGGTTGCAATAATTTACACA 59.292 34.615 0.59 0.00 33.01 3.72
2292 6835 7.307692 CCCAAAAGGTTGCAATAATTTACACAC 60.308 37.037 0.59 0.00 33.01 3.82
2293 6836 7.307692 CCAAAAGGTTGCAATAATTTACACACC 60.308 37.037 0.59 0.00 33.01 4.16
2294 6837 6.664428 AAGGTTGCAATAATTTACACACCT 57.336 33.333 0.59 0.00 0.00 4.00
2295 6838 6.024552 AGGTTGCAATAATTTACACACCTG 57.975 37.500 0.59 0.00 0.00 4.00
2296 6839 5.772672 AGGTTGCAATAATTTACACACCTGA 59.227 36.000 0.59 0.00 0.00 3.86
2297 6840 6.437162 AGGTTGCAATAATTTACACACCTGAT 59.563 34.615 0.59 0.00 0.00 2.90
2298 6841 7.613801 AGGTTGCAATAATTTACACACCTGATA 59.386 33.333 0.59 0.00 0.00 2.15
2299 6842 8.247562 GGTTGCAATAATTTACACACCTGATAA 58.752 33.333 0.59 0.00 0.00 1.75
2300 6843 9.801873 GTTGCAATAATTTACACACCTGATAAT 57.198 29.630 0.59 0.00 0.00 1.28
2302 6845 8.341903 TGCAATAATTTACACACCTGATAATCG 58.658 33.333 0.00 0.00 0.00 3.34
2303 6846 7.803189 GCAATAATTTACACACCTGATAATCGG 59.197 37.037 0.00 0.00 0.00 4.18
2304 6847 9.051679 CAATAATTTACACACCTGATAATCGGA 57.948 33.333 0.00 0.00 0.00 4.55
2305 6848 8.833231 ATAATTTACACACCTGATAATCGGAG 57.167 34.615 0.00 0.00 0.00 4.63
2306 6849 5.925506 TTTACACACCTGATAATCGGAGA 57.074 39.130 0.00 0.00 45.75 3.71
2307 6850 5.925506 TTACACACCTGATAATCGGAGAA 57.074 39.130 0.00 0.00 43.58 2.87
2308 6851 4.819105 ACACACCTGATAATCGGAGAAA 57.181 40.909 0.00 0.00 43.58 2.52
2309 6852 5.160607 ACACACCTGATAATCGGAGAAAA 57.839 39.130 0.00 0.00 43.58 2.29
2310 6853 5.178797 ACACACCTGATAATCGGAGAAAAG 58.821 41.667 0.00 0.00 43.58 2.27
2311 6854 4.572389 CACACCTGATAATCGGAGAAAAGG 59.428 45.833 0.00 0.00 43.58 3.11
2312 6855 4.469945 ACACCTGATAATCGGAGAAAAGGA 59.530 41.667 0.00 0.00 43.58 3.36
2313 6856 5.131142 ACACCTGATAATCGGAGAAAAGGAT 59.869 40.000 0.00 0.00 43.58 3.24
2314 6857 6.326583 ACACCTGATAATCGGAGAAAAGGATA 59.673 38.462 0.00 0.00 43.58 2.59
2315 6858 7.147549 ACACCTGATAATCGGAGAAAAGGATAA 60.148 37.037 0.00 0.00 43.58 1.75
2316 6859 7.715249 CACCTGATAATCGGAGAAAAGGATAAA 59.285 37.037 0.00 0.00 43.58 1.40
2317 6860 8.272173 ACCTGATAATCGGAGAAAAGGATAAAA 58.728 33.333 0.00 0.00 43.58 1.52
2318 6861 9.289782 CCTGATAATCGGAGAAAAGGATAAAAT 57.710 33.333 0.00 0.00 43.58 1.82
2323 6866 6.436843 TCGGAGAAAAGGATAAAATTGAGC 57.563 37.500 0.00 0.00 0.00 4.26
2324 6867 5.357032 TCGGAGAAAAGGATAAAATTGAGCC 59.643 40.000 0.00 0.00 0.00 4.70
2325 6868 5.450550 CGGAGAAAAGGATAAAATTGAGCCC 60.451 44.000 0.00 0.00 0.00 5.19
2326 6869 5.422012 GGAGAAAAGGATAAAATTGAGCCCA 59.578 40.000 0.00 0.00 0.00 5.36
2327 6870 6.286240 AGAAAAGGATAAAATTGAGCCCAC 57.714 37.500 0.00 0.00 0.00 4.61
2328 6871 5.187772 AGAAAAGGATAAAATTGAGCCCACC 59.812 40.000 0.00 0.00 0.00 4.61
2329 6872 4.337264 AAGGATAAAATTGAGCCCACCT 57.663 40.909 0.00 0.00 0.00 4.00
2330 6873 3.635591 AGGATAAAATTGAGCCCACCTG 58.364 45.455 0.00 0.00 0.00 4.00
2331 6874 3.011708 AGGATAAAATTGAGCCCACCTGT 59.988 43.478 0.00 0.00 0.00 4.00
2332 6875 3.381590 GGATAAAATTGAGCCCACCTGTC 59.618 47.826 0.00 0.00 0.00 3.51
2333 6876 1.632589 AAAATTGAGCCCACCTGTCC 58.367 50.000 0.00 0.00 0.00 4.02
2334 6877 0.482446 AAATTGAGCCCACCTGTCCA 59.518 50.000 0.00 0.00 0.00 4.02
2335 6878 0.706433 AATTGAGCCCACCTGTCCAT 59.294 50.000 0.00 0.00 0.00 3.41
2336 6879 0.033796 ATTGAGCCCACCTGTCCATG 60.034 55.000 0.00 0.00 0.00 3.66
2337 6880 2.141011 TTGAGCCCACCTGTCCATGG 62.141 60.000 4.97 4.97 35.59 3.66
2338 6881 4.052518 AGCCCACCTGTCCATGGC 62.053 66.667 6.96 2.72 42.48 4.40
2339 6882 4.365111 GCCCACCTGTCCATGGCA 62.365 66.667 6.96 7.80 41.76 4.92
2340 6883 2.440147 CCCACCTGTCCATGGCAA 59.560 61.111 6.96 0.00 34.37 4.52
2341 6884 1.000739 CCCACCTGTCCATGGCAAT 59.999 57.895 6.96 0.00 34.37 3.56
2342 6885 1.324740 CCCACCTGTCCATGGCAATG 61.325 60.000 6.96 9.45 34.37 2.82
2343 6886 1.514087 CACCTGTCCATGGCAATGC 59.486 57.895 6.96 0.00 31.93 3.56
2354 6897 2.103538 GCAATGCCTCGCCACATG 59.896 61.111 0.00 0.00 0.00 3.21
2355 6898 2.409055 GCAATGCCTCGCCACATGA 61.409 57.895 0.00 0.00 0.00 3.07
2356 6899 1.731433 GCAATGCCTCGCCACATGAT 61.731 55.000 0.00 0.00 0.00 2.45
2357 6900 0.309922 CAATGCCTCGCCACATGATC 59.690 55.000 0.00 0.00 0.00 2.92
2358 6901 0.182061 AATGCCTCGCCACATGATCT 59.818 50.000 0.00 0.00 0.00 2.75
2359 6902 0.250209 ATGCCTCGCCACATGATCTC 60.250 55.000 0.00 0.00 0.00 2.75
2360 6903 1.144716 GCCTCGCCACATGATCTCA 59.855 57.895 0.00 0.00 0.00 3.27
2361 6904 1.156645 GCCTCGCCACATGATCTCAC 61.157 60.000 0.00 0.00 0.00 3.51
2362 6905 0.463204 CCTCGCCACATGATCTCACT 59.537 55.000 0.00 0.00 0.00 3.41
2363 6906 1.537776 CCTCGCCACATGATCTCACTC 60.538 57.143 0.00 0.00 0.00 3.51
2364 6907 1.135721 CTCGCCACATGATCTCACTCA 59.864 52.381 0.00 0.00 0.00 3.41
2365 6908 1.134995 TCGCCACATGATCTCACTCAC 60.135 52.381 0.00 0.00 0.00 3.51
2366 6909 1.284657 GCCACATGATCTCACTCACG 58.715 55.000 0.00 0.00 0.00 4.35
2367 6910 1.284657 CCACATGATCTCACTCACGC 58.715 55.000 0.00 0.00 0.00 5.34
2368 6911 1.284657 CACATGATCTCACTCACGCC 58.715 55.000 0.00 0.00 0.00 5.68
2369 6912 0.897621 ACATGATCTCACTCACGCCA 59.102 50.000 0.00 0.00 0.00 5.69
2370 6913 1.483827 ACATGATCTCACTCACGCCAT 59.516 47.619 0.00 0.00 0.00 4.40
2371 6914 1.865340 CATGATCTCACTCACGCCATG 59.135 52.381 0.00 0.00 0.00 3.66
2372 6915 0.897621 TGATCTCACTCACGCCATGT 59.102 50.000 0.00 0.00 0.00 3.21
2373 6916 1.134995 TGATCTCACTCACGCCATGTC 60.135 52.381 0.00 0.00 0.00 3.06
2374 6917 0.176680 ATCTCACTCACGCCATGTCC 59.823 55.000 0.00 0.00 0.00 4.02
2375 6918 1.184970 TCTCACTCACGCCATGTCCA 61.185 55.000 0.00 0.00 0.00 4.02
2376 6919 1.005037 TCACTCACGCCATGTCCAC 60.005 57.895 0.00 0.00 0.00 4.02
2377 6920 2.048222 ACTCACGCCATGTCCACG 60.048 61.111 0.00 0.00 0.00 4.94
2378 6921 3.490759 CTCACGCCATGTCCACGC 61.491 66.667 0.00 0.00 0.00 5.34
2379 6922 4.306967 TCACGCCATGTCCACGCA 62.307 61.111 0.00 0.00 0.00 5.24
2380 6923 3.353029 CACGCCATGTCCACGCAA 61.353 61.111 0.00 0.00 0.00 4.85
2381 6924 2.359850 ACGCCATGTCCACGCAAT 60.360 55.556 0.00 0.00 0.00 3.56
2382 6925 1.971167 ACGCCATGTCCACGCAATT 60.971 52.632 0.00 0.00 0.00 2.32
2383 6926 1.226379 CGCCATGTCCACGCAATTC 60.226 57.895 0.00 0.00 0.00 2.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
15 16 9.396022 ACAGAAAATGAACAATTCCGAGTATAT 57.604 29.630 0.00 0.00 0.00 0.86
16 17 8.786826 ACAGAAAATGAACAATTCCGAGTATA 57.213 30.769 0.00 0.00 0.00 1.47
17 18 7.390440 TGACAGAAAATGAACAATTCCGAGTAT 59.610 33.333 0.00 0.00 0.00 2.12
18 19 6.708502 TGACAGAAAATGAACAATTCCGAGTA 59.291 34.615 0.00 0.00 0.00 2.59
19 20 5.530915 TGACAGAAAATGAACAATTCCGAGT 59.469 36.000 0.00 0.00 0.00 4.18
20 21 6.000891 TGACAGAAAATGAACAATTCCGAG 57.999 37.500 0.00 0.00 0.00 4.63
21 22 6.573664 ATGACAGAAAATGAACAATTCCGA 57.426 33.333 0.00 0.00 0.00 4.55
22 23 6.862608 TCAATGACAGAAAATGAACAATTCCG 59.137 34.615 0.00 0.00 0.00 4.30
23 24 8.767478 ATCAATGACAGAAAATGAACAATTCC 57.233 30.769 0.00 0.00 0.00 3.01
24 25 8.866956 GGATCAATGACAGAAAATGAACAATTC 58.133 33.333 0.00 0.00 0.00 2.17
25 26 8.369424 TGGATCAATGACAGAAAATGAACAATT 58.631 29.630 0.00 0.00 0.00 2.32
26 27 7.898918 TGGATCAATGACAGAAAATGAACAAT 58.101 30.769 0.00 0.00 0.00 2.71
27 28 7.287512 TGGATCAATGACAGAAAATGAACAA 57.712 32.000 0.00 0.00 0.00 2.83
28 29 6.897706 TGGATCAATGACAGAAAATGAACA 57.102 33.333 0.00 0.00 0.00 3.18
29 30 6.309737 GCTTGGATCAATGACAGAAAATGAAC 59.690 38.462 0.00 0.00 0.00 3.18
45 46 0.537143 ACAAACGGCTGCTTGGATCA 60.537 50.000 13.06 0.00 0.00 2.92
46 47 0.109597 CACAAACGGCTGCTTGGATC 60.110 55.000 13.06 0.00 0.00 3.36
49 50 2.355009 GCACAAACGGCTGCTTGG 60.355 61.111 13.06 3.69 0.00 3.61
96 97 8.804204 TGGTTTTGGTTATATCCGTACATTTTT 58.196 29.630 0.00 0.00 0.00 1.94
97 98 8.245491 GTGGTTTTGGTTATATCCGTACATTTT 58.755 33.333 0.00 0.00 0.00 1.82
100 101 6.416415 TGTGGTTTTGGTTATATCCGTACAT 58.584 36.000 0.00 0.00 0.00 2.29
101 102 5.802465 TGTGGTTTTGGTTATATCCGTACA 58.198 37.500 0.00 0.00 0.00 2.90
105 106 3.945285 AGCTGTGGTTTTGGTTATATCCG 59.055 43.478 0.00 0.00 0.00 4.18
120 121 5.587844 ACTGCATAAGAATAAGAAGCTGTGG 59.412 40.000 0.00 0.00 32.71 4.17
166 167 4.351192 CTCAACTTTGTTTACAGCACCAC 58.649 43.478 0.00 0.00 0.00 4.16
167 168 3.380004 CCTCAACTTTGTTTACAGCACCA 59.620 43.478 0.00 0.00 0.00 4.17
168 169 3.243401 CCCTCAACTTTGTTTACAGCACC 60.243 47.826 0.00 0.00 0.00 5.01
170 171 3.626930 ACCCTCAACTTTGTTTACAGCA 58.373 40.909 0.00 0.00 0.00 4.41
171 172 3.303791 CGACCCTCAACTTTGTTTACAGC 60.304 47.826 0.00 0.00 0.00 4.40
172 173 4.124238 TCGACCCTCAACTTTGTTTACAG 58.876 43.478 0.00 0.00 0.00 2.74
210 212 5.524281 ACTTTTCTCTCGTTTTCCTTGTCTC 59.476 40.000 0.00 0.00 0.00 3.36
213 253 5.183228 TCACTTTTCTCTCGTTTTCCTTGT 58.817 37.500 0.00 0.00 0.00 3.16
216 256 5.294552 CAGTTCACTTTTCTCTCGTTTTCCT 59.705 40.000 0.00 0.00 0.00 3.36
233 273 3.050275 GCAGTCGGGCCAGTTCAC 61.050 66.667 4.39 0.00 0.00 3.18
234 274 1.549243 TATGCAGTCGGGCCAGTTCA 61.549 55.000 4.39 0.00 0.00 3.18
273 313 4.345257 TGCTCATGGAAGGATAGGTACTTC 59.655 45.833 0.00 0.00 43.44 3.01
275 315 3.928754 TGCTCATGGAAGGATAGGTACT 58.071 45.455 0.00 0.00 46.37 2.73
276 316 4.689612 TTGCTCATGGAAGGATAGGTAC 57.310 45.455 0.00 0.00 0.00 3.34
280 320 3.535561 ACGTTTGCTCATGGAAGGATAG 58.464 45.455 0.00 0.00 0.00 2.08
285 325 4.007282 CATGTACGTTTGCTCATGGAAG 57.993 45.455 0.00 0.00 35.47 3.46
290 330 2.113860 AGCCATGTACGTTTGCTCAT 57.886 45.000 0.00 0.00 0.00 2.90
294 335 3.051606 CATGTAGCCATGTACGTTTGC 57.948 47.619 0.00 0.00 42.92 3.68
316 357 3.118592 CGGAGGGAGTAGAAAGAAAGCAT 60.119 47.826 0.00 0.00 0.00 3.79
318 359 2.234168 ACGGAGGGAGTAGAAAGAAAGC 59.766 50.000 0.00 0.00 0.00 3.51
329 370 3.991683 AGTATTTAGGAACGGAGGGAGT 58.008 45.455 0.00 0.00 0.00 3.85
330 371 4.161754 ACAAGTATTTAGGAACGGAGGGAG 59.838 45.833 0.00 0.00 0.00 4.30
331 372 4.098894 ACAAGTATTTAGGAACGGAGGGA 58.901 43.478 0.00 0.00 0.00 4.20
332 373 4.161754 AGACAAGTATTTAGGAACGGAGGG 59.838 45.833 0.00 0.00 0.00 4.30
333 374 5.340439 AGACAAGTATTTAGGAACGGAGG 57.660 43.478 0.00 0.00 0.00 4.30
334 375 7.097834 AGAAAGACAAGTATTTAGGAACGGAG 58.902 38.462 0.00 0.00 0.00 4.63
335 376 7.001099 AGAAAGACAAGTATTTAGGAACGGA 57.999 36.000 0.00 0.00 0.00 4.69
336 377 7.491696 CCTAGAAAGACAAGTATTTAGGAACGG 59.508 40.741 4.01 0.00 26.70 4.44
337 378 7.010275 GCCTAGAAAGACAAGTATTTAGGAACG 59.990 40.741 11.40 0.00 26.70 3.95
338 379 7.822822 TGCCTAGAAAGACAAGTATTTAGGAAC 59.177 37.037 11.40 0.00 26.70 3.62
339 380 7.913789 TGCCTAGAAAGACAAGTATTTAGGAA 58.086 34.615 11.40 1.02 26.70 3.36
340 381 7.490657 TGCCTAGAAAGACAAGTATTTAGGA 57.509 36.000 11.40 0.00 26.70 2.94
341 382 8.738645 AATGCCTAGAAAGACAAGTATTTAGG 57.261 34.615 5.26 5.26 0.00 2.69
343 384 9.733556 TGAAATGCCTAGAAAGACAAGTATTTA 57.266 29.630 0.00 0.00 0.00 1.40
344 385 8.635765 TGAAATGCCTAGAAAGACAAGTATTT 57.364 30.769 0.00 0.00 0.00 1.40
345 386 8.515414 GTTGAAATGCCTAGAAAGACAAGTATT 58.485 33.333 0.00 0.00 0.00 1.89
346 387 7.665559 TGTTGAAATGCCTAGAAAGACAAGTAT 59.334 33.333 0.00 0.00 0.00 2.12
347 388 6.995686 TGTTGAAATGCCTAGAAAGACAAGTA 59.004 34.615 0.00 0.00 0.00 2.24
348 389 5.827797 TGTTGAAATGCCTAGAAAGACAAGT 59.172 36.000 0.00 0.00 0.00 3.16
349 390 6.317789 TGTTGAAATGCCTAGAAAGACAAG 57.682 37.500 0.00 0.00 0.00 3.16
350 391 6.321181 ACTTGTTGAAATGCCTAGAAAGACAA 59.679 34.615 0.00 0.00 0.00 3.18
351 392 5.827797 ACTTGTTGAAATGCCTAGAAAGACA 59.172 36.000 0.00 0.00 0.00 3.41
352 393 6.017109 TCACTTGTTGAAATGCCTAGAAAGAC 60.017 38.462 0.00 0.00 0.00 3.01
353 394 6.017109 GTCACTTGTTGAAATGCCTAGAAAGA 60.017 38.462 0.00 0.00 35.39 2.52
354 395 6.016777 AGTCACTTGTTGAAATGCCTAGAAAG 60.017 38.462 0.00 0.00 35.39 2.62
355 396 5.827797 AGTCACTTGTTGAAATGCCTAGAAA 59.172 36.000 0.00 0.00 35.39 2.52
356 397 5.376625 AGTCACTTGTTGAAATGCCTAGAA 58.623 37.500 0.00 0.00 35.39 2.10
357 398 4.973168 AGTCACTTGTTGAAATGCCTAGA 58.027 39.130 0.00 0.00 35.39 2.43
358 399 5.700832 TGTAGTCACTTGTTGAAATGCCTAG 59.299 40.000 0.00 0.00 35.39 3.02
359 400 5.616270 TGTAGTCACTTGTTGAAATGCCTA 58.384 37.500 0.00 0.00 35.39 3.93
360 401 4.460263 TGTAGTCACTTGTTGAAATGCCT 58.540 39.130 0.00 0.00 35.39 4.75
361 402 4.829064 TGTAGTCACTTGTTGAAATGCC 57.171 40.909 0.00 0.00 35.39 4.40
362 403 6.015504 CGTATGTAGTCACTTGTTGAAATGC 58.984 40.000 0.00 0.00 35.39 3.56
363 404 7.346208 TCGTATGTAGTCACTTGTTGAAATG 57.654 36.000 0.00 0.00 35.39 2.32
364 405 7.360101 GCTTCGTATGTAGTCACTTGTTGAAAT 60.360 37.037 0.00 0.00 35.39 2.17
365 406 6.073980 GCTTCGTATGTAGTCACTTGTTGAAA 60.074 38.462 0.00 0.00 35.39 2.69
366 407 5.404366 GCTTCGTATGTAGTCACTTGTTGAA 59.596 40.000 0.00 0.00 35.39 2.69
367 408 4.921515 GCTTCGTATGTAGTCACTTGTTGA 59.078 41.667 0.00 0.00 0.00 3.18
368 409 4.684242 TGCTTCGTATGTAGTCACTTGTTG 59.316 41.667 0.00 0.00 0.00 3.33
369 410 4.878439 TGCTTCGTATGTAGTCACTTGTT 58.122 39.130 0.00 0.00 0.00 2.83
370 411 4.514781 TGCTTCGTATGTAGTCACTTGT 57.485 40.909 0.00 0.00 0.00 3.16
371 412 5.839262 TTTGCTTCGTATGTAGTCACTTG 57.161 39.130 0.00 0.00 0.00 3.16
372 413 6.649141 TCATTTTGCTTCGTATGTAGTCACTT 59.351 34.615 0.00 0.00 0.00 3.16
373 414 6.163476 TCATTTTGCTTCGTATGTAGTCACT 58.837 36.000 0.00 0.00 0.00 3.41
374 415 6.090898 ACTCATTTTGCTTCGTATGTAGTCAC 59.909 38.462 0.00 0.00 0.00 3.67
375 416 6.090763 CACTCATTTTGCTTCGTATGTAGTCA 59.909 38.462 0.00 0.00 0.00 3.41
376 417 6.310467 TCACTCATTTTGCTTCGTATGTAGTC 59.690 38.462 0.00 0.00 0.00 2.59
377 418 6.163476 TCACTCATTTTGCTTCGTATGTAGT 58.837 36.000 0.00 0.00 0.00 2.73
378 419 6.647212 TCACTCATTTTGCTTCGTATGTAG 57.353 37.500 0.00 0.00 0.00 2.74
379 420 7.549134 AGATTCACTCATTTTGCTTCGTATGTA 59.451 33.333 0.00 0.00 0.00 2.29
380 421 5.940192 TTCACTCATTTTGCTTCGTATGT 57.060 34.783 0.00 0.00 0.00 2.29
381 422 6.779117 AGATTCACTCATTTTGCTTCGTATG 58.221 36.000 0.00 0.00 0.00 2.39
382 423 6.992063 AGATTCACTCATTTTGCTTCGTAT 57.008 33.333 0.00 0.00 0.00 3.06
383 424 6.871492 TGTAGATTCACTCATTTTGCTTCGTA 59.129 34.615 0.00 0.00 0.00 3.43
384 425 5.700832 TGTAGATTCACTCATTTTGCTTCGT 59.299 36.000 0.00 0.00 0.00 3.85
385 426 6.017933 GTGTAGATTCACTCATTTTGCTTCG 58.982 40.000 0.00 0.00 35.68 3.79
386 427 7.138692 AGTGTAGATTCACTCATTTTGCTTC 57.861 36.000 0.00 0.00 44.07 3.86
426 467 7.664318 TCACATGACTACTACATACGGATGTAT 59.336 37.037 20.64 13.02 45.42 2.29
427 468 6.993902 TCACATGACTACTACATACGGATGTA 59.006 38.462 19.32 19.32 44.77 2.29
429 470 6.313744 TCACATGACTACTACATACGGATG 57.686 41.667 5.94 5.94 39.16 3.51
430 471 6.954487 TTCACATGACTACTACATACGGAT 57.046 37.500 0.00 0.00 0.00 4.18
431 472 6.762702 TTTCACATGACTACTACATACGGA 57.237 37.500 0.00 0.00 0.00 4.69
432 473 6.978659 ACATTTCACATGACTACTACATACGG 59.021 38.462 0.00 0.00 0.00 4.02
433 474 7.915923 AGACATTTCACATGACTACTACATACG 59.084 37.037 0.00 0.00 0.00 3.06
436 477 9.190317 TCTAGACATTTCACATGACTACTACAT 57.810 33.333 0.00 0.00 0.00 2.29
437 478 8.575649 TCTAGACATTTCACATGACTACTACA 57.424 34.615 0.00 0.00 0.00 2.74
438 479 9.856488 TTTCTAGACATTTCACATGACTACTAC 57.144 33.333 0.00 0.00 0.00 2.73
440 481 9.778741 TTTTTCTAGACATTTCACATGACTACT 57.221 29.630 0.00 0.00 0.00 2.57
441 482 9.813080 GTTTTTCTAGACATTTCACATGACTAC 57.187 33.333 0.00 0.00 0.00 2.73
442 483 9.554395 TGTTTTTCTAGACATTTCACATGACTA 57.446 29.630 0.00 0.00 0.00 2.59
443 484 8.450578 TGTTTTTCTAGACATTTCACATGACT 57.549 30.769 0.00 0.00 0.00 3.41
444 485 9.515020 TTTGTTTTTCTAGACATTTCACATGAC 57.485 29.630 0.00 0.00 0.00 3.06
460 501 8.520351 CCTCCGTTCCTAAATATTTGTTTTTCT 58.480 33.333 11.05 0.00 0.00 2.52
461 502 7.758076 CCCTCCGTTCCTAAATATTTGTTTTTC 59.242 37.037 11.05 0.00 0.00 2.29
462 503 7.452189 TCCCTCCGTTCCTAAATATTTGTTTTT 59.548 33.333 11.05 0.00 0.00 1.94
463 504 6.949463 TCCCTCCGTTCCTAAATATTTGTTTT 59.051 34.615 11.05 0.00 0.00 2.43
464 505 6.486941 TCCCTCCGTTCCTAAATATTTGTTT 58.513 36.000 11.05 0.00 0.00 2.83
465 506 6.069705 TCCCTCCGTTCCTAAATATTTGTT 57.930 37.500 11.05 0.00 0.00 2.83
466 507 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
467 508 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
468 509 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
469 510 6.141790 AGTACTCCCTCCGTTCCTAAATATT 58.858 40.000 0.00 0.00 0.00 1.28
470 511 5.713807 AGTACTCCCTCCGTTCCTAAATAT 58.286 41.667 0.00 0.00 0.00 1.28
471 512 5.134725 AGTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
472 513 3.959449 GAGTACTCCCTCCGTTCCTAAAT 59.041 47.826 12.13 0.00 0.00 1.40
473 514 3.359950 GAGTACTCCCTCCGTTCCTAAA 58.640 50.000 12.13 0.00 0.00 1.85
474 515 2.681976 CGAGTACTCCCTCCGTTCCTAA 60.682 54.545 17.23 0.00 0.00 2.69
475 516 1.134280 CGAGTACTCCCTCCGTTCCTA 60.134 57.143 17.23 0.00 0.00 2.94
476 517 0.394080 CGAGTACTCCCTCCGTTCCT 60.394 60.000 17.23 0.00 0.00 3.36
477 518 1.382692 CCGAGTACTCCCTCCGTTCC 61.383 65.000 17.23 0.00 0.00 3.62
478 519 2.002509 GCCGAGTACTCCCTCCGTTC 62.003 65.000 17.23 0.00 0.00 3.95
479 520 2.050934 GCCGAGTACTCCCTCCGTT 61.051 63.158 17.23 0.00 0.00 4.44
480 521 2.439883 GCCGAGTACTCCCTCCGT 60.440 66.667 17.23 0.00 0.00 4.69
481 522 1.601419 TTTGCCGAGTACTCCCTCCG 61.601 60.000 17.23 5.64 0.00 4.63
482 523 0.108281 GTTTGCCGAGTACTCCCTCC 60.108 60.000 17.23 3.87 0.00 4.30
483 524 0.606604 TGTTTGCCGAGTACTCCCTC 59.393 55.000 17.23 6.97 0.00 4.30
484 525 0.608640 CTGTTTGCCGAGTACTCCCT 59.391 55.000 17.23 0.00 0.00 4.20
485 526 0.606604 TCTGTTTGCCGAGTACTCCC 59.393 55.000 17.23 9.03 0.00 4.30
486 527 2.067013 GTTCTGTTTGCCGAGTACTCC 58.933 52.381 17.23 4.79 0.00 3.85
487 528 2.750948 TGTTCTGTTTGCCGAGTACTC 58.249 47.619 13.18 13.18 0.00 2.59
488 529 2.902705 TGTTCTGTTTGCCGAGTACT 57.097 45.000 0.00 0.00 0.00 2.73
489 530 3.746492 AGATTGTTCTGTTTGCCGAGTAC 59.254 43.478 0.00 0.00 0.00 2.73
496 537 7.862372 TGTCAGAAAATAGATTGTTCTGTTTGC 59.138 33.333 17.28 0.00 45.50 3.68
543 584 7.865385 TCAAGTTTAAAAATGGATGACCGAAAG 59.135 33.333 0.00 0.00 39.42 2.62
549 590 9.346725 GTGAGATCAAGTTTAAAAATGGATGAC 57.653 33.333 0.00 0.00 0.00 3.06
701 757 4.642885 AGGATGTGCTCTGAAGTAGACTAC 59.357 45.833 4.32 4.32 0.00 2.73
898 1225 1.440938 CCGTTGCCGTTGAAGACCAA 61.441 55.000 0.00 0.00 0.00 3.67
1472 5949 3.321968 GTCCTCATTCTGGGCAAAAACTT 59.678 43.478 0.00 0.00 0.00 2.66
1474 5951 2.627699 TGTCCTCATTCTGGGCAAAAAC 59.372 45.455 0.00 0.00 36.11 2.43
1475 5952 2.956132 TGTCCTCATTCTGGGCAAAAA 58.044 42.857 0.00 0.00 36.11 1.94
1480 5957 2.621998 CAATCATGTCCTCATTCTGGGC 59.378 50.000 0.00 0.00 31.15 5.36
1481 5958 2.621998 GCAATCATGTCCTCATTCTGGG 59.378 50.000 0.00 0.00 31.15 4.45
1484 5961 4.774660 AGAGCAATCATGTCCTCATTCT 57.225 40.909 0.00 0.00 31.15 2.40
1485 5962 5.831702 AAAGAGCAATCATGTCCTCATTC 57.168 39.130 0.00 0.00 31.15 2.67
1486 5963 6.395629 CAAAAAGAGCAATCATGTCCTCATT 58.604 36.000 0.00 0.00 31.15 2.57
1487 5964 5.105473 CCAAAAAGAGCAATCATGTCCTCAT 60.105 40.000 0.00 0.00 34.21 2.90
1488 5965 4.219070 CCAAAAAGAGCAATCATGTCCTCA 59.781 41.667 0.00 0.00 0.00 3.86
1489 5966 4.219288 ACCAAAAAGAGCAATCATGTCCTC 59.781 41.667 0.00 0.00 0.00 3.71
1490 5967 4.021719 CACCAAAAAGAGCAATCATGTCCT 60.022 41.667 0.00 0.00 0.00 3.85
1491 5968 4.240096 CACCAAAAAGAGCAATCATGTCC 58.760 43.478 0.00 0.00 0.00 4.02
1493 5976 4.942761 ACACCAAAAAGAGCAATCATGT 57.057 36.364 0.00 0.00 0.00 3.21
1498 5981 4.379813 CGAGCATACACCAAAAAGAGCAAT 60.380 41.667 0.00 0.00 0.00 3.56
1500 5983 2.483877 CGAGCATACACCAAAAAGAGCA 59.516 45.455 0.00 0.00 0.00 4.26
1501 5984 2.742053 TCGAGCATACACCAAAAAGAGC 59.258 45.455 0.00 0.00 0.00 4.09
1547 6032 7.226918 TGTGTTGAAACTATGGTCGTGAAATAA 59.773 33.333 0.00 0.00 0.00 1.40
1549 6034 5.529430 TGTGTTGAAACTATGGTCGTGAAAT 59.471 36.000 0.00 0.00 0.00 2.17
1601 6136 4.253685 CAAACTGAGGATAACACACGGAT 58.746 43.478 0.00 0.00 0.00 4.18
1604 6139 3.186409 CCACAAACTGAGGATAACACACG 59.814 47.826 0.00 0.00 28.90 4.49
1605 6140 3.502211 CCCACAAACTGAGGATAACACAC 59.498 47.826 0.00 0.00 28.90 3.82
1683 6218 4.809426 CCGTGTGGGATCATAAAGTCTTAC 59.191 45.833 0.00 0.00 38.47 2.34
1744 6279 4.341520 AGAGGCCGACGACTAATTTATTCT 59.658 41.667 0.00 0.00 0.00 2.40
1746 6281 4.667519 AGAGGCCGACGACTAATTTATT 57.332 40.909 0.00 0.00 0.00 1.40
1747 6282 4.369182 CAAGAGGCCGACGACTAATTTAT 58.631 43.478 0.00 0.00 0.00 1.40
1748 6283 3.429822 CCAAGAGGCCGACGACTAATTTA 60.430 47.826 0.00 0.00 0.00 1.40
1749 6284 2.618053 CAAGAGGCCGACGACTAATTT 58.382 47.619 0.00 0.00 0.00 1.82
1781 6316 3.057456 TGGCTAACGTTTTTGTGTGTGTT 60.057 39.130 5.91 0.00 0.00 3.32
1810 6345 1.279840 GTTGCGTCTGCCAGTGAAC 59.720 57.895 0.00 0.00 41.78 3.18
1811 6346 0.746204 TTGTTGCGTCTGCCAGTGAA 60.746 50.000 0.00 0.00 41.78 3.18
1855 6396 6.983890 GCCCTATTGAACTTTCTTTTTGTGAA 59.016 34.615 0.00 0.00 0.00 3.18
1860 6402 6.280643 GTGTGCCCTATTGAACTTTCTTTTT 58.719 36.000 0.00 0.00 0.00 1.94
1914 6457 0.837272 TTCCCACCACTAGGCTATGC 59.163 55.000 0.00 0.00 39.06 3.14
1915 6458 1.417890 CCTTCCCACCACTAGGCTATG 59.582 57.143 0.00 0.00 39.06 2.23
1916 6459 1.695989 CCCTTCCCACCACTAGGCTAT 60.696 57.143 0.00 0.00 39.06 2.97
1917 6460 0.326238 CCCTTCCCACCACTAGGCTA 60.326 60.000 0.00 0.00 39.06 3.93
1918 6461 1.616628 CCCTTCCCACCACTAGGCT 60.617 63.158 0.00 0.00 39.06 4.58
1919 6462 2.680370 CCCCTTCCCACCACTAGGC 61.680 68.421 0.00 0.00 39.06 3.93
1920 6463 0.845102 AACCCCTTCCCACCACTAGG 60.845 60.000 0.00 0.00 42.21 3.02
1921 6464 0.328258 CAACCCCTTCCCACCACTAG 59.672 60.000 0.00 0.00 0.00 2.57
1922 6465 0.104356 TCAACCCCTTCCCACCACTA 60.104 55.000 0.00 0.00 0.00 2.74
1923 6466 0.776080 ATCAACCCCTTCCCACCACT 60.776 55.000 0.00 0.00 0.00 4.00
1924 6467 0.611896 CATCAACCCCTTCCCACCAC 60.612 60.000 0.00 0.00 0.00 4.16
1925 6468 1.773635 CATCAACCCCTTCCCACCA 59.226 57.895 0.00 0.00 0.00 4.17
1926 6469 1.682344 GCATCAACCCCTTCCCACC 60.682 63.158 0.00 0.00 0.00 4.61
1927 6470 1.682344 GGCATCAACCCCTTCCCAC 60.682 63.158 0.00 0.00 0.00 4.61
1928 6471 1.442886 AAGGCATCAACCCCTTCCCA 61.443 55.000 0.00 0.00 36.78 4.37
1929 6472 1.388133 AAGGCATCAACCCCTTCCC 59.612 57.895 0.00 0.00 36.78 3.97
1932 6475 1.388133 GGGAAGGCATCAACCCCTT 59.612 57.895 0.00 0.00 43.87 3.95
1933 6476 1.856873 TGGGAAGGCATCAACCCCT 60.857 57.895 0.00 0.00 41.44 4.79
1934 6477 1.682344 GTGGGAAGGCATCAACCCC 60.682 63.158 0.00 0.00 41.44 4.95
1935 6478 1.682344 GGTGGGAAGGCATCAACCC 60.682 63.158 0.00 0.00 42.37 4.11
1936 6479 1.682344 GGGTGGGAAGGCATCAACC 60.682 63.158 5.53 5.53 36.20 3.77
1937 6480 1.076549 TGGGTGGGAAGGCATCAAC 59.923 57.895 0.00 0.00 0.00 3.18
1938 6481 1.076549 GTGGGTGGGAAGGCATCAA 59.923 57.895 0.00 0.00 0.00 2.57
1939 6482 2.763215 GTGGGTGGGAAGGCATCA 59.237 61.111 0.00 0.00 0.00 3.07
1940 6483 2.043953 GGTGGGTGGGAAGGCATC 60.044 66.667 0.00 0.00 0.00 3.91
1941 6484 3.672503 GGGTGGGTGGGAAGGCAT 61.673 66.667 0.00 0.00 0.00 4.40
1943 6486 4.366684 CTGGGTGGGTGGGAAGGC 62.367 72.222 0.00 0.00 0.00 4.35
1944 6487 3.661648 CCTGGGTGGGTGGGAAGG 61.662 72.222 0.00 0.00 0.00 3.46
1945 6488 2.426305 GAACCTGGGTGGGTGGGAAG 62.426 65.000 0.00 0.00 39.85 3.46
1946 6489 2.370403 AACCTGGGTGGGTGGGAA 60.370 61.111 0.00 0.00 39.85 3.97
1947 6490 2.856988 GAACCTGGGTGGGTGGGA 60.857 66.667 0.00 0.00 39.85 4.37
1948 6491 2.713531 CTTGAACCTGGGTGGGTGGG 62.714 65.000 0.00 0.00 39.85 4.61
1949 6492 1.228552 CTTGAACCTGGGTGGGTGG 60.229 63.158 0.00 0.00 39.85 4.61
1950 6493 1.228552 CCTTGAACCTGGGTGGGTG 60.229 63.158 0.00 0.00 39.85 4.61
1951 6494 3.146828 GCCTTGAACCTGGGTGGGT 62.147 63.158 0.00 0.00 42.05 4.51
1952 6495 2.283173 GCCTTGAACCTGGGTGGG 60.283 66.667 0.00 0.00 41.11 4.61
1953 6496 1.077265 ATGCCTTGAACCTGGGTGG 59.923 57.895 0.00 0.00 42.93 4.61
1954 6497 1.252904 CCATGCCTTGAACCTGGGTG 61.253 60.000 0.00 0.00 0.00 4.61
1955 6498 1.077265 CCATGCCTTGAACCTGGGT 59.923 57.895 0.00 0.00 0.00 4.51
1956 6499 0.331278 TACCATGCCTTGAACCTGGG 59.669 55.000 0.00 0.00 0.00 4.45
1957 6500 1.004745 AGTACCATGCCTTGAACCTGG 59.995 52.381 0.00 0.00 0.00 4.45
1958 6501 2.489329 CAAGTACCATGCCTTGAACCTG 59.511 50.000 10.72 0.00 40.36 4.00
1959 6502 2.795329 CAAGTACCATGCCTTGAACCT 58.205 47.619 10.72 0.00 40.36 3.50
1960 6503 1.202348 GCAAGTACCATGCCTTGAACC 59.798 52.381 17.22 2.20 40.36 3.62
1961 6504 1.885887 TGCAAGTACCATGCCTTGAAC 59.114 47.619 16.17 5.82 43.16 3.18
1962 6505 2.284754 TGCAAGTACCATGCCTTGAA 57.715 45.000 16.17 7.93 43.16 2.69
1963 6506 2.284754 TTGCAAGTACCATGCCTTGA 57.715 45.000 16.17 0.00 43.16 3.02
1964 6507 3.598019 AATTGCAAGTACCATGCCTTG 57.402 42.857 16.17 11.51 43.16 3.61
1965 6508 3.306919 CCAAATTGCAAGTACCATGCCTT 60.307 43.478 16.17 8.78 43.16 4.35
1966 6509 2.234414 CCAAATTGCAAGTACCATGCCT 59.766 45.455 16.17 3.91 43.16 4.75
1967 6510 2.620242 CCAAATTGCAAGTACCATGCC 58.380 47.619 16.17 2.49 43.16 4.40
1968 6511 2.620242 CCCAAATTGCAAGTACCATGC 58.380 47.619 4.94 12.96 44.08 4.06
1969 6512 2.566724 ACCCCAAATTGCAAGTACCATG 59.433 45.455 4.94 0.00 0.00 3.66
1970 6513 2.901291 ACCCCAAATTGCAAGTACCAT 58.099 42.857 4.94 0.00 0.00 3.55
1971 6514 2.366916 CAACCCCAAATTGCAAGTACCA 59.633 45.455 4.94 0.00 0.00 3.25
1972 6515 2.367241 ACAACCCCAAATTGCAAGTACC 59.633 45.455 4.94 0.00 0.00 3.34
1973 6516 3.744238 ACAACCCCAAATTGCAAGTAC 57.256 42.857 4.94 0.00 0.00 2.73
1974 6517 3.742640 GCAACAACCCCAAATTGCAAGTA 60.743 43.478 4.94 0.00 45.38 2.24
1975 6518 2.916640 CAACAACCCCAAATTGCAAGT 58.083 42.857 4.94 0.00 0.00 3.16
1976 6519 1.603326 GCAACAACCCCAAATTGCAAG 59.397 47.619 4.94 0.00 45.38 4.01
1977 6520 1.673168 GCAACAACCCCAAATTGCAA 58.327 45.000 0.00 0.00 45.38 4.08
1978 6521 3.393472 GCAACAACCCCAAATTGCA 57.607 47.368 3.06 0.00 45.38 4.08
1979 6522 0.943673 GTGCAACAACCCCAAATTGC 59.056 50.000 0.00 0.94 46.08 3.56
1980 6523 1.134280 TGGTGCAACAACCCCAAATTG 60.134 47.619 0.00 0.00 39.70 2.32
1981 6524 1.207791 TGGTGCAACAACCCCAAATT 58.792 45.000 0.00 0.00 39.70 1.82
1982 6525 1.207791 TTGGTGCAACAACCCCAAAT 58.792 45.000 14.57 0.00 39.70 2.32
1983 6526 1.207791 ATTGGTGCAACAACCCCAAA 58.792 45.000 21.66 0.00 40.16 3.28
1984 6527 2.088104 TATTGGTGCAACAACCCCAA 57.912 45.000 21.66 13.19 39.70 4.12
1985 6528 2.317371 ATATTGGTGCAACAACCCCA 57.683 45.000 21.66 2.74 39.70 4.96
1986 6529 2.429250 GGTATATTGGTGCAACAACCCC 59.571 50.000 21.66 13.13 39.70 4.95
1987 6530 2.098443 CGGTATATTGGTGCAACAACCC 59.902 50.000 21.66 15.74 39.70 4.11
1988 6531 2.750712 ACGGTATATTGGTGCAACAACC 59.249 45.455 21.66 16.44 39.98 3.77
1989 6532 4.034742 CCTACGGTATATTGGTGCAACAAC 59.965 45.833 21.66 7.65 39.98 3.32
1990 6533 4.193090 CCTACGGTATATTGGTGCAACAA 58.807 43.478 21.46 21.46 39.98 2.83
1991 6534 3.432467 CCCTACGGTATATTGGTGCAACA 60.432 47.826 0.00 0.00 39.98 3.33
1992 6535 3.135994 CCCTACGGTATATTGGTGCAAC 58.864 50.000 0.00 0.00 0.00 4.17
1993 6536 2.105134 CCCCTACGGTATATTGGTGCAA 59.895 50.000 0.00 0.00 0.00 4.08
1994 6537 1.695242 CCCCTACGGTATATTGGTGCA 59.305 52.381 0.00 0.00 0.00 4.57
1995 6538 1.002773 CCCCCTACGGTATATTGGTGC 59.997 57.143 0.00 0.00 0.00 5.01
1996 6539 2.332117 ACCCCCTACGGTATATTGGTG 58.668 52.381 0.00 0.00 33.04 4.17
1997 6540 2.801282 ACCCCCTACGGTATATTGGT 57.199 50.000 0.00 0.00 33.04 3.67
1998 6541 2.303890 GGAACCCCCTACGGTATATTGG 59.696 54.545 0.00 0.00 33.98 3.16
1999 6542 3.690475 GGAACCCCCTACGGTATATTG 57.310 52.381 0.00 0.00 33.98 1.90
2042 6585 7.414814 TTTTCTCTTTTGCGTTGAAGTTTTT 57.585 28.000 0.00 0.00 0.00 1.94
2043 6586 7.414814 TTTTTCTCTTTTGCGTTGAAGTTTT 57.585 28.000 0.00 0.00 0.00 2.43
2100 6643 2.191354 CTGGCAGTGGCACGAACATG 62.191 60.000 16.56 5.69 43.71 3.21
2102 6645 2.591429 CTGGCAGTGGCACGAACA 60.591 61.111 16.56 11.07 43.71 3.18
2142 6685 3.842007 TTGTACTCCGGTTTCCTTGAA 57.158 42.857 0.00 0.00 0.00 2.69
2145 6688 3.118149 ACACTTTGTACTCCGGTTTCCTT 60.118 43.478 0.00 0.00 0.00 3.36
2247 6790 2.123640 GGGAGGGAGAGAGACGGG 60.124 72.222 0.00 0.00 0.00 5.28
2286 6829 5.925506 TTTCTCCGATTATCAGGTGTGTA 57.074 39.130 0.00 0.00 0.00 2.90
2289 6832 4.469945 TCCTTTTCTCCGATTATCAGGTGT 59.530 41.667 0.00 0.00 0.00 4.16
2290 6833 5.023533 TCCTTTTCTCCGATTATCAGGTG 57.976 43.478 0.00 0.00 0.00 4.00
2291 6834 5.896073 ATCCTTTTCTCCGATTATCAGGT 57.104 39.130 0.00 0.00 0.00 4.00
2292 6835 8.677148 TTTTATCCTTTTCTCCGATTATCAGG 57.323 34.615 0.00 0.00 0.00 3.86
2297 6840 8.621286 GCTCAATTTTATCCTTTTCTCCGATTA 58.379 33.333 0.00 0.00 0.00 1.75
2298 6841 7.416777 GGCTCAATTTTATCCTTTTCTCCGATT 60.417 37.037 0.00 0.00 0.00 3.34
2299 6842 6.039829 GGCTCAATTTTATCCTTTTCTCCGAT 59.960 38.462 0.00 0.00 0.00 4.18
2300 6843 5.357032 GGCTCAATTTTATCCTTTTCTCCGA 59.643 40.000 0.00 0.00 0.00 4.55
2301 6844 5.450550 GGGCTCAATTTTATCCTTTTCTCCG 60.451 44.000 0.00 0.00 0.00 4.63
2302 6845 5.422012 TGGGCTCAATTTTATCCTTTTCTCC 59.578 40.000 0.00 0.00 0.00 3.71
2303 6846 6.333416 GTGGGCTCAATTTTATCCTTTTCTC 58.667 40.000 0.00 0.00 0.00 2.87
2304 6847 5.187772 GGTGGGCTCAATTTTATCCTTTTCT 59.812 40.000 0.00 0.00 0.00 2.52
2305 6848 5.187772 AGGTGGGCTCAATTTTATCCTTTTC 59.812 40.000 0.00 0.00 0.00 2.29
2306 6849 5.046376 CAGGTGGGCTCAATTTTATCCTTTT 60.046 40.000 0.00 0.00 0.00 2.27
2307 6850 4.467438 CAGGTGGGCTCAATTTTATCCTTT 59.533 41.667 0.00 0.00 0.00 3.11
2308 6851 4.026052 CAGGTGGGCTCAATTTTATCCTT 58.974 43.478 0.00 0.00 0.00 3.36
2309 6852 3.011708 ACAGGTGGGCTCAATTTTATCCT 59.988 43.478 0.00 0.00 0.00 3.24
2310 6853 3.365472 ACAGGTGGGCTCAATTTTATCC 58.635 45.455 0.00 0.00 0.00 2.59
2311 6854 3.381590 GGACAGGTGGGCTCAATTTTATC 59.618 47.826 0.00 0.00 0.00 1.75
2312 6855 3.245586 TGGACAGGTGGGCTCAATTTTAT 60.246 43.478 0.00 0.00 0.00 1.40
2313 6856 2.109128 TGGACAGGTGGGCTCAATTTTA 59.891 45.455 0.00 0.00 0.00 1.52
2314 6857 1.133199 TGGACAGGTGGGCTCAATTTT 60.133 47.619 0.00 0.00 0.00 1.82
2315 6858 0.482446 TGGACAGGTGGGCTCAATTT 59.518 50.000 0.00 0.00 0.00 1.82
2316 6859 0.706433 ATGGACAGGTGGGCTCAATT 59.294 50.000 0.00 0.00 0.00 2.32
2317 6860 0.033796 CATGGACAGGTGGGCTCAAT 60.034 55.000 0.00 0.00 0.00 2.57
2318 6861 1.379916 CATGGACAGGTGGGCTCAA 59.620 57.895 0.00 0.00 0.00 3.02
2319 6862 2.605607 CCATGGACAGGTGGGCTCA 61.606 63.158 5.56 0.00 0.00 4.26
2320 6863 2.273449 CCATGGACAGGTGGGCTC 59.727 66.667 5.56 0.00 0.00 4.70
2321 6864 4.052518 GCCATGGACAGGTGGGCT 62.053 66.667 18.40 0.00 41.39 5.19
2322 6865 3.884704 TTGCCATGGACAGGTGGGC 62.885 63.158 18.40 0.00 44.82 5.36
2323 6866 1.000739 ATTGCCATGGACAGGTGGG 59.999 57.895 18.40 0.00 36.00 4.61
2324 6867 1.952102 GCATTGCCATGGACAGGTGG 61.952 60.000 18.40 5.25 38.55 4.61
2325 6868 1.514087 GCATTGCCATGGACAGGTG 59.486 57.895 18.40 15.33 0.00 4.00
2326 6869 4.023137 GCATTGCCATGGACAGGT 57.977 55.556 18.40 3.36 0.00 4.00
2337 6880 1.731433 ATCATGTGGCGAGGCATTGC 61.731 55.000 0.78 0.78 34.78 3.56
2338 6881 0.309922 GATCATGTGGCGAGGCATTG 59.690 55.000 1.94 4.63 0.00 2.82
2339 6882 0.182061 AGATCATGTGGCGAGGCATT 59.818 50.000 1.94 0.00 0.00 3.56
2340 6883 0.250209 GAGATCATGTGGCGAGGCAT 60.250 55.000 1.94 0.00 0.00 4.40
2341 6884 1.144716 GAGATCATGTGGCGAGGCA 59.855 57.895 0.00 0.00 0.00 4.75
2342 6885 1.144716 TGAGATCATGTGGCGAGGC 59.855 57.895 0.00 0.00 0.00 4.70
2343 6886 0.463204 AGTGAGATCATGTGGCGAGG 59.537 55.000 0.00 0.00 0.00 4.63
2344 6887 1.135721 TGAGTGAGATCATGTGGCGAG 59.864 52.381 0.00 0.00 0.00 5.03
2345 6888 1.134995 GTGAGTGAGATCATGTGGCGA 60.135 52.381 0.00 0.00 0.00 5.54
2346 6889 1.284657 GTGAGTGAGATCATGTGGCG 58.715 55.000 0.00 0.00 0.00 5.69
2347 6890 1.284657 CGTGAGTGAGATCATGTGGC 58.715 55.000 0.00 0.00 32.56 5.01
2348 6891 1.284657 GCGTGAGTGAGATCATGTGG 58.715 55.000 0.00 0.00 38.28 4.17
2349 6892 1.284657 GGCGTGAGTGAGATCATGTG 58.715 55.000 0.00 0.00 38.28 3.21
2350 6893 0.897621 TGGCGTGAGTGAGATCATGT 59.102 50.000 0.00 0.00 38.28 3.21
2351 6894 1.865340 CATGGCGTGAGTGAGATCATG 59.135 52.381 0.00 0.00 38.90 3.07
2352 6895 1.483827 ACATGGCGTGAGTGAGATCAT 59.516 47.619 14.82 0.00 0.00 2.45
2353 6896 0.897621 ACATGGCGTGAGTGAGATCA 59.102 50.000 14.82 0.00 0.00 2.92
2354 6897 1.565305 GACATGGCGTGAGTGAGATC 58.435 55.000 14.82 0.00 0.00 2.75
2355 6898 0.176680 GGACATGGCGTGAGTGAGAT 59.823 55.000 14.82 0.00 0.00 2.75
2356 6899 1.184970 TGGACATGGCGTGAGTGAGA 61.185 55.000 14.82 0.00 0.00 3.27
2357 6900 1.016130 GTGGACATGGCGTGAGTGAG 61.016 60.000 14.82 0.00 0.00 3.51
2358 6901 1.005037 GTGGACATGGCGTGAGTGA 60.005 57.895 14.82 0.00 0.00 3.41
2359 6902 2.382746 CGTGGACATGGCGTGAGTG 61.383 63.158 14.82 0.00 0.00 3.51
2360 6903 2.048222 CGTGGACATGGCGTGAGT 60.048 61.111 14.82 0.00 0.00 3.41
2361 6904 3.490759 GCGTGGACATGGCGTGAG 61.491 66.667 14.82 0.57 0.00 3.51
2362 6905 3.816367 TTGCGTGGACATGGCGTGA 62.816 57.895 14.82 0.00 0.00 4.35
2363 6906 2.198906 AATTGCGTGGACATGGCGTG 62.199 55.000 4.87 4.87 0.00 5.34
2364 6907 1.922135 GAATTGCGTGGACATGGCGT 61.922 55.000 0.00 0.00 0.00 5.68
2365 6908 1.226379 GAATTGCGTGGACATGGCG 60.226 57.895 0.00 0.00 0.00 5.69
2366 6909 4.792106 GAATTGCGTGGACATGGC 57.208 55.556 0.00 0.00 0.00 4.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.