Multiple sequence alignment - TraesCS3A01G447000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G447000 chr3A 100.000 1311 0 0 997 2307 687059108 687057798 0.000000e+00 2422
1 TraesCS3A01G447000 chr3A 100.000 516 0 0 1 516 687060104 687059589 0.000000e+00 953
2 TraesCS3A01G447000 chr3A 100.000 442 0 0 2534 2975 687057571 687057130 0.000000e+00 817
3 TraesCS3A01G447000 chr3B 92.282 1192 53 12 1000 2174 729706022 729704853 0.000000e+00 1655
4 TraesCS3A01G447000 chr3B 87.500 344 28 8 187 516 729706516 729706174 1.670000e-102 383
5 TraesCS3A01G447000 chr3D 90.799 1152 50 22 997 2129 550244345 550243231 0.000000e+00 1489
6 TraesCS3A01G447000 chr3D 93.664 363 8 6 160 516 550244847 550244494 2.030000e-146 529
7 TraesCS3A01G447000 chr6D 87.580 314 29 4 1488 1801 424712580 424712883 3.650000e-94 355
8 TraesCS3A01G447000 chr6D 85.669 314 35 4 1488 1801 424745258 424745561 3.700000e-84 322
9 TraesCS3A01G447000 chr6D 90.385 104 10 0 1168 1271 424712400 424712503 1.440000e-28 137
10 TraesCS3A01G447000 chr6A 84.407 295 37 3 1490 1784 569589872 569590157 6.280000e-72 281
11 TraesCS3A01G447000 chr6A 95.597 159 5 1 1 159 608156880 608157036 1.370000e-63 254
12 TraesCS3A01G447000 chr6A 95.570 158 6 1 2 159 558022879 558022723 4.920000e-63 252
13 TraesCS3A01G447000 chr5A 98.113 159 3 0 1 159 662001599 662001441 8.120000e-71 278
14 TraesCS3A01G447000 chr5A 94.771 153 8 0 1 153 352795877 352796029 3.830000e-59 239
15 TraesCS3A01G447000 chr2A 95.597 159 7 0 1 159 709200655 709200813 3.810000e-64 255
16 TraesCS3A01G447000 chr7A 95.513 156 7 0 4 159 629069332 629069177 1.770000e-62 250
17 TraesCS3A01G447000 chr7A 93.082 159 11 0 1 159 2202640 2202798 1.780000e-57 233
18 TraesCS3A01G447000 chr5D 94.904 157 8 0 1 157 267826576 267826420 2.290000e-61 246
19 TraesCS3A01G447000 chr1A 94.231 156 7 1 4 159 442618367 442618520 1.380000e-58 237


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G447000 chr3A 687057130 687060104 2974 True 1397.333333 2422 100.0000 1 2975 3 chr3A.!!$R1 2974
1 TraesCS3A01G447000 chr3B 729704853 729706516 1663 True 1019.000000 1655 89.8910 187 2174 2 chr3B.!!$R1 1987
2 TraesCS3A01G447000 chr3D 550243231 550244847 1616 True 1009.000000 1489 92.2315 160 2129 2 chr3D.!!$R1 1969

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
461 481 0.390472 AAGGAAAAGCGAGCGAGGAG 60.39 55.0 0.0 0.0 0.0 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2156 2216 3.252944 TGATCAAGTTACCACGTACACGA 59.747 43.478 9.04 0.0 43.02 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 7.621428 ACGAATGTGATCTGAAGATGAAATT 57.379 32.000 0.00 0.00 34.37 1.82
26 27 8.048534 ACGAATGTGATCTGAAGATGAAATTT 57.951 30.769 0.00 0.00 34.37 1.82
27 28 8.517878 ACGAATGTGATCTGAAGATGAAATTTT 58.482 29.630 0.00 0.00 34.37 1.82
28 29 8.795341 CGAATGTGATCTGAAGATGAAATTTTG 58.205 33.333 0.00 0.00 34.37 2.44
29 30 8.475331 AATGTGATCTGAAGATGAAATTTTGC 57.525 30.769 0.00 0.00 34.37 3.68
30 31 6.983984 TGTGATCTGAAGATGAAATTTTGCA 58.016 32.000 0.00 0.00 34.37 4.08
31 32 7.435305 TGTGATCTGAAGATGAAATTTTGCAA 58.565 30.769 0.00 0.00 34.37 4.08
32 33 7.597369 TGTGATCTGAAGATGAAATTTTGCAAG 59.403 33.333 0.00 0.00 34.37 4.01
33 34 6.588756 TGATCTGAAGATGAAATTTTGCAAGC 59.411 34.615 0.00 0.00 34.37 4.01
34 35 5.232463 TCTGAAGATGAAATTTTGCAAGCC 58.768 37.500 0.00 0.00 0.00 4.35
35 36 3.989167 TGAAGATGAAATTTTGCAAGCCG 59.011 39.130 0.00 0.00 0.00 5.52
36 37 3.665745 AGATGAAATTTTGCAAGCCGT 57.334 38.095 0.00 0.00 0.00 5.68
37 38 3.993920 AGATGAAATTTTGCAAGCCGTT 58.006 36.364 0.00 0.00 0.00 4.44
38 39 5.132897 AGATGAAATTTTGCAAGCCGTTA 57.867 34.783 0.00 0.00 0.00 3.18
39 40 5.163513 AGATGAAATTTTGCAAGCCGTTAG 58.836 37.500 0.00 0.00 0.00 2.34
40 41 4.576216 TGAAATTTTGCAAGCCGTTAGA 57.424 36.364 0.00 0.00 0.00 2.10
41 42 4.938080 TGAAATTTTGCAAGCCGTTAGAA 58.062 34.783 0.00 0.00 0.00 2.10
42 43 4.742659 TGAAATTTTGCAAGCCGTTAGAAC 59.257 37.500 0.00 0.00 0.00 3.01
43 44 4.314740 AATTTTGCAAGCCGTTAGAACA 57.685 36.364 0.00 0.00 0.00 3.18
44 45 4.519540 ATTTTGCAAGCCGTTAGAACAT 57.480 36.364 0.00 0.00 0.00 2.71
45 46 4.314740 TTTTGCAAGCCGTTAGAACATT 57.685 36.364 0.00 0.00 0.00 2.71
46 47 4.314740 TTTGCAAGCCGTTAGAACATTT 57.685 36.364 0.00 0.00 0.00 2.32
47 48 3.281341 TGCAAGCCGTTAGAACATTTG 57.719 42.857 0.00 0.00 0.00 2.32
48 49 2.621055 TGCAAGCCGTTAGAACATTTGT 59.379 40.909 0.00 0.00 0.00 2.83
49 50 3.234386 GCAAGCCGTTAGAACATTTGTC 58.766 45.455 0.00 0.00 0.00 3.18
50 51 3.304391 GCAAGCCGTTAGAACATTTGTCA 60.304 43.478 0.00 0.00 0.00 3.58
51 52 4.791411 GCAAGCCGTTAGAACATTTGTCAA 60.791 41.667 0.00 0.00 0.00 3.18
52 53 5.277825 CAAGCCGTTAGAACATTTGTCAAA 58.722 37.500 0.00 0.00 0.00 2.69
53 54 5.108385 AGCCGTTAGAACATTTGTCAAAG 57.892 39.130 4.03 0.00 0.00 2.77
54 55 4.578928 AGCCGTTAGAACATTTGTCAAAGT 59.421 37.500 4.03 0.09 0.00 2.66
55 56 5.067283 AGCCGTTAGAACATTTGTCAAAGTT 59.933 36.000 4.03 8.17 0.00 2.66
56 57 5.398416 GCCGTTAGAACATTTGTCAAAGTTC 59.602 40.000 21.03 21.03 40.37 3.01
57 58 6.491394 CCGTTAGAACATTTGTCAAAGTTCA 58.509 36.000 25.61 16.58 42.01 3.18
58 59 7.138736 CCGTTAGAACATTTGTCAAAGTTCAT 58.861 34.615 25.61 18.46 42.01 2.57
59 60 7.323656 CCGTTAGAACATTTGTCAAAGTTCATC 59.676 37.037 25.61 18.64 42.01 2.92
60 61 7.855409 CGTTAGAACATTTGTCAAAGTTCATCA 59.145 33.333 25.61 15.88 42.01 3.07
61 62 8.958043 GTTAGAACATTTGTCAAAGTTCATCAC 58.042 33.333 25.61 19.22 42.01 3.06
62 63 7.099266 AGAACATTTGTCAAAGTTCATCACA 57.901 32.000 25.61 0.00 42.01 3.58
63 64 7.546358 AGAACATTTGTCAAAGTTCATCACAA 58.454 30.769 25.61 4.24 42.01 3.33
64 65 8.034215 AGAACATTTGTCAAAGTTCATCACAAA 58.966 29.630 25.61 11.11 42.01 2.83
65 66 8.545229 AACATTTGTCAAAGTTCATCACAAAA 57.455 26.923 4.03 0.00 39.66 2.44
66 67 8.545229 ACATTTGTCAAAGTTCATCACAAAAA 57.455 26.923 4.03 0.00 39.66 1.94
123 124 6.452494 TTTTTGATTTTACTGTTCACCCGA 57.548 33.333 0.00 0.00 0.00 5.14
124 125 5.682943 TTTGATTTTACTGTTCACCCGAG 57.317 39.130 0.00 0.00 0.00 4.63
125 126 3.071479 TGATTTTACTGTTCACCCGAGC 58.929 45.455 0.00 0.00 0.00 5.03
126 127 2.922740 TTTTACTGTTCACCCGAGCT 57.077 45.000 0.00 0.00 0.00 4.09
127 128 2.450609 TTTACTGTTCACCCGAGCTC 57.549 50.000 2.73 2.73 0.00 4.09
128 129 1.334160 TTACTGTTCACCCGAGCTCA 58.666 50.000 15.40 0.00 0.00 4.26
129 130 1.557099 TACTGTTCACCCGAGCTCAT 58.443 50.000 15.40 0.00 0.00 2.90
130 131 0.687354 ACTGTTCACCCGAGCTCATT 59.313 50.000 15.40 0.00 0.00 2.57
131 132 1.072331 ACTGTTCACCCGAGCTCATTT 59.928 47.619 15.40 0.00 0.00 2.32
132 133 1.466167 CTGTTCACCCGAGCTCATTTG 59.534 52.381 15.40 6.81 0.00 2.32
133 134 1.071542 TGTTCACCCGAGCTCATTTGA 59.928 47.619 15.40 9.18 0.00 2.69
134 135 1.734465 GTTCACCCGAGCTCATTTGAG 59.266 52.381 15.40 3.13 44.75 3.02
143 144 3.540211 CTCATTTGAGCTCGGGTGT 57.460 52.632 9.64 0.00 35.13 4.16
144 145 2.672961 CTCATTTGAGCTCGGGTGTA 57.327 50.000 9.64 0.00 35.13 2.90
145 146 2.544685 CTCATTTGAGCTCGGGTGTAG 58.455 52.381 9.64 0.00 35.13 2.74
146 147 2.166459 CTCATTTGAGCTCGGGTGTAGA 59.834 50.000 9.64 0.00 35.13 2.59
147 148 2.766263 TCATTTGAGCTCGGGTGTAGAT 59.234 45.455 9.64 0.00 0.00 1.98
148 149 3.958147 TCATTTGAGCTCGGGTGTAGATA 59.042 43.478 9.64 0.00 0.00 1.98
149 150 3.795623 TTTGAGCTCGGGTGTAGATAC 57.204 47.619 9.64 0.00 0.00 2.24
150 151 2.730934 TGAGCTCGGGTGTAGATACT 57.269 50.000 9.64 0.00 0.00 2.12
151 152 2.573369 TGAGCTCGGGTGTAGATACTC 58.427 52.381 9.64 0.00 0.00 2.59
152 153 1.881324 GAGCTCGGGTGTAGATACTCC 59.119 57.143 0.00 3.04 38.72 3.85
153 154 1.214673 AGCTCGGGTGTAGATACTCCA 59.785 52.381 11.95 0.00 40.63 3.86
154 155 1.337387 GCTCGGGTGTAGATACTCCAC 59.663 57.143 11.95 0.00 40.63 4.02
155 156 1.602851 CTCGGGTGTAGATACTCCACG 59.397 57.143 11.95 12.01 40.63 4.94
156 157 1.065199 TCGGGTGTAGATACTCCACGT 60.065 52.381 11.95 0.00 40.63 4.49
157 158 1.332997 CGGGTGTAGATACTCCACGTC 59.667 57.143 11.95 0.00 40.63 4.34
158 159 1.680207 GGGTGTAGATACTCCACGTCC 59.320 57.143 11.95 0.00 40.63 4.79
173 174 2.092211 CACGTCCAGTTAACGAAGCATC 59.908 50.000 0.00 0.00 42.62 3.91
243 249 2.929398 TGCATGTGTACGCAATGTCTAG 59.071 45.455 14.03 0.00 34.59 2.43
272 278 2.880890 CTGAACTTGTCTGAACCAAGGG 59.119 50.000 11.32 0.00 42.84 3.95
294 300 2.801342 GCAAGGTCAGAAGGATAGCGAG 60.801 54.545 0.00 0.00 0.00 5.03
381 401 4.426313 CGGCCCTTCCCCACCTTC 62.426 72.222 0.00 0.00 0.00 3.46
387 407 1.140134 CCTTCCCCACCTTCCTTCCA 61.140 60.000 0.00 0.00 0.00 3.53
389 409 0.777446 TTCCCCACCTTCCTTCCAAG 59.223 55.000 0.00 0.00 0.00 3.61
390 410 0.402861 TCCCCACCTTCCTTCCAAGT 60.403 55.000 0.00 0.00 0.00 3.16
391 411 0.482887 CCCCACCTTCCTTCCAAGTT 59.517 55.000 0.00 0.00 0.00 2.66
392 412 1.620822 CCCACCTTCCTTCCAAGTTG 58.379 55.000 0.00 0.00 0.00 3.16
393 413 1.620822 CCACCTTCCTTCCAAGTTGG 58.379 55.000 16.36 16.36 39.43 3.77
394 414 0.961753 CACCTTCCTTCCAAGTTGGC 59.038 55.000 17.68 0.00 37.47 4.52
444 464 1.790387 CGAGCGCAAAAGGAGGAAG 59.210 57.895 11.47 0.00 0.00 3.46
461 481 0.390472 AAGGAAAAGCGAGCGAGGAG 60.390 55.000 0.00 0.00 0.00 3.69
1020 1045 2.726912 GCCGACGACGACGAACAA 60.727 61.111 20.63 0.00 42.66 2.83
1045 1071 0.799393 CGAGCGAACAGAGAGTCAGA 59.201 55.000 0.00 0.00 0.00 3.27
1047 1073 1.132262 GAGCGAACAGAGAGTCAGAGG 59.868 57.143 0.00 0.00 0.00 3.69
1051 1077 0.600557 AACAGAGAGTCAGAGGCACG 59.399 55.000 0.00 0.00 0.00 5.34
1073 1099 1.539065 CGACACAGACAGGCTTGAGTT 60.539 52.381 1.40 0.00 0.00 3.01
1092 1118 1.611556 GAGGGGGAAGGTGGTACGT 60.612 63.158 0.00 0.00 0.00 3.57
1261 1287 2.182030 GTCGCCAACCTCCTCTCG 59.818 66.667 0.00 0.00 0.00 4.04
1777 1812 0.549950 TCCCGTACTACCTCCAGGAG 59.450 60.000 9.90 9.90 38.94 3.69
1816 1851 2.362717 GAGCCGATGAAGTTACCTAGCT 59.637 50.000 0.00 0.00 0.00 3.32
1817 1852 2.101582 AGCCGATGAAGTTACCTAGCTG 59.898 50.000 0.00 0.00 0.00 4.24
1873 1908 2.198827 TTCCATGATTGCTTGGACGT 57.801 45.000 0.00 0.00 45.07 4.34
1874 1909 1.452110 TCCATGATTGCTTGGACGTG 58.548 50.000 0.00 0.00 41.80 4.49
1875 1910 0.452987 CCATGATTGCTTGGACGTGG 59.547 55.000 0.00 0.00 40.77 4.94
1876 1911 1.167851 CATGATTGCTTGGACGTGGT 58.832 50.000 0.00 0.00 0.00 4.16
1877 1912 1.135603 CATGATTGCTTGGACGTGGTG 60.136 52.381 0.00 0.00 0.00 4.17
1878 1913 0.888736 TGATTGCTTGGACGTGGTGG 60.889 55.000 0.00 0.00 0.00 4.61
2069 2121 6.012745 ACCCTCTTCTTTTTCTGCATGTATT 58.987 36.000 0.00 0.00 0.00 1.89
2122 2182 2.990740 TGGGTTTTAGTTGCTGGGAT 57.009 45.000 0.00 0.00 0.00 3.85
2130 2190 6.404734 GGTTTTAGTTGCTGGGATCAAGTATG 60.405 42.308 0.00 0.00 31.65 2.39
2153 2213 7.493743 TGCTTTGCATTGTAAATTTCATTGT 57.506 28.000 0.00 0.00 31.71 2.71
2154 2214 8.599055 TGCTTTGCATTGTAAATTTCATTGTA 57.401 26.923 0.00 0.00 31.71 2.41
2171 2231 5.572511 TCATTGTATTCGTGTACGTGGTAAC 59.427 40.000 0.00 0.00 40.80 2.50
2174 2234 4.916831 TGTATTCGTGTACGTGGTAACTTG 59.083 41.667 0.00 0.00 40.80 3.16
2175 2235 3.706802 TTCGTGTACGTGGTAACTTGA 57.293 42.857 0.00 0.00 40.80 3.02
2176 2236 3.921119 TCGTGTACGTGGTAACTTGAT 57.079 42.857 0.00 0.00 40.80 2.57
2177 2237 3.825308 TCGTGTACGTGGTAACTTGATC 58.175 45.455 0.00 0.00 40.80 2.92
2178 2238 3.252944 TCGTGTACGTGGTAACTTGATCA 59.747 43.478 0.00 0.00 40.80 2.92
2179 2239 3.982701 CGTGTACGTGGTAACTTGATCAA 59.017 43.478 8.12 8.12 37.61 2.57
2180 2240 4.624024 CGTGTACGTGGTAACTTGATCAAT 59.376 41.667 8.96 0.00 37.61 2.57
2181 2241 5.801444 CGTGTACGTGGTAACTTGATCAATA 59.199 40.000 8.96 0.00 37.61 1.90
2182 2242 6.474427 CGTGTACGTGGTAACTTGATCAATAT 59.526 38.462 8.96 3.53 37.61 1.28
2183 2243 7.644945 CGTGTACGTGGTAACTTGATCAATATA 59.355 37.037 8.96 2.52 37.61 0.86
2184 2244 9.472361 GTGTACGTGGTAACTTGATCAATATAT 57.528 33.333 8.96 0.00 37.61 0.86
2185 2245 9.471084 TGTACGTGGTAACTTGATCAATATATG 57.529 33.333 8.96 0.00 37.61 1.78
2186 2246 9.472361 GTACGTGGTAACTTGATCAATATATGT 57.528 33.333 8.96 0.00 37.61 2.29
2187 2247 8.958119 ACGTGGTAACTTGATCAATATATGTT 57.042 30.769 8.96 11.36 37.61 2.71
2188 2248 9.391006 ACGTGGTAACTTGATCAATATATGTTT 57.609 29.630 8.96 0.00 37.61 2.83
2224 2284 9.850628 AAACTTGATCAATATATATGTGCATGC 57.149 29.630 11.82 11.82 0.00 4.06
2225 2285 7.993101 ACTTGATCAATATATATGTGCATGCC 58.007 34.615 16.68 7.25 0.00 4.40
2226 2286 7.612633 ACTTGATCAATATATATGTGCATGCCA 59.387 33.333 16.68 13.21 0.00 4.92
2227 2287 8.528044 TTGATCAATATATATGTGCATGCCAT 57.472 30.769 16.68 19.15 0.00 4.40
2228 2288 8.161699 TGATCAATATATATGTGCATGCCATC 57.838 34.615 20.47 10.39 0.00 3.51
2229 2289 7.996644 TGATCAATATATATGTGCATGCCATCT 59.003 33.333 20.47 15.11 0.00 2.90
2230 2290 9.498176 GATCAATATATATGTGCATGCCATCTA 57.502 33.333 20.47 16.40 0.00 1.98
2237 2297 4.895668 TGTGCATGCCATCTATATCTCA 57.104 40.909 16.68 0.00 0.00 3.27
2238 2298 4.572909 TGTGCATGCCATCTATATCTCAC 58.427 43.478 16.68 1.92 0.00 3.51
2239 2299 4.285260 TGTGCATGCCATCTATATCTCACT 59.715 41.667 16.68 0.00 0.00 3.41
2240 2300 5.221783 TGTGCATGCCATCTATATCTCACTT 60.222 40.000 16.68 0.00 0.00 3.16
2241 2301 5.350914 GTGCATGCCATCTATATCTCACTTC 59.649 44.000 16.68 0.00 0.00 3.01
2242 2302 5.247792 TGCATGCCATCTATATCTCACTTCT 59.752 40.000 16.68 0.00 0.00 2.85
2243 2303 6.438425 TGCATGCCATCTATATCTCACTTCTA 59.562 38.462 16.68 0.00 0.00 2.10
2244 2304 7.038799 TGCATGCCATCTATATCTCACTTCTAA 60.039 37.037 16.68 0.00 0.00 2.10
2245 2305 7.277539 GCATGCCATCTATATCTCACTTCTAAC 59.722 40.741 6.36 0.00 0.00 2.34
2246 2306 8.530311 CATGCCATCTATATCTCACTTCTAACT 58.470 37.037 0.00 0.00 0.00 2.24
2247 2307 8.484214 TGCCATCTATATCTCACTTCTAACTT 57.516 34.615 0.00 0.00 0.00 2.66
2248 2308 8.928448 TGCCATCTATATCTCACTTCTAACTTT 58.072 33.333 0.00 0.00 0.00 2.66
2249 2309 9.202273 GCCATCTATATCTCACTTCTAACTTTG 57.798 37.037 0.00 0.00 0.00 2.77
2253 2313 9.702253 TCTATATCTCACTTCTAACTTTGAGGT 57.298 33.333 0.00 0.00 36.84 3.85
2257 2317 8.880991 ATCTCACTTCTAACTTTGAGGTACTA 57.119 34.615 0.00 0.00 41.55 1.82
2258 2318 8.880991 TCTCACTTCTAACTTTGAGGTACTAT 57.119 34.615 0.00 0.00 41.55 2.12
2259 2319 9.310449 TCTCACTTCTAACTTTGAGGTACTATT 57.690 33.333 0.00 0.00 41.55 1.73
2260 2320 9.575783 CTCACTTCTAACTTTGAGGTACTATTC 57.424 37.037 0.00 0.00 41.55 1.75
2261 2321 8.529476 TCACTTCTAACTTTGAGGTACTATTCC 58.471 37.037 0.00 0.00 41.55 3.01
2262 2322 7.764901 CACTTCTAACTTTGAGGTACTATTCCC 59.235 40.741 0.00 0.00 41.55 3.97
2263 2323 7.456902 ACTTCTAACTTTGAGGTACTATTCCCA 59.543 37.037 0.00 0.00 41.55 4.37
2264 2324 7.989947 TCTAACTTTGAGGTACTATTCCCAT 57.010 36.000 0.00 0.00 41.55 4.00
2265 2325 8.019656 TCTAACTTTGAGGTACTATTCCCATC 57.980 38.462 0.00 0.00 41.55 3.51
2266 2326 5.632034 ACTTTGAGGTACTATTCCCATCC 57.368 43.478 0.00 0.00 41.55 3.51
2267 2327 5.289510 ACTTTGAGGTACTATTCCCATCCT 58.710 41.667 0.00 0.00 41.55 3.24
2268 2328 6.449956 ACTTTGAGGTACTATTCCCATCCTA 58.550 40.000 0.00 0.00 41.55 2.94
2269 2329 7.082972 ACTTTGAGGTACTATTCCCATCCTAT 58.917 38.462 0.00 0.00 41.55 2.57
2270 2330 7.572861 ACTTTGAGGTACTATTCCCATCCTATT 59.427 37.037 0.00 0.00 41.55 1.73
2271 2331 7.554959 TTGAGGTACTATTCCCATCCTATTC 57.445 40.000 0.00 0.00 41.55 1.75
2272 2332 6.630131 TGAGGTACTATTCCCATCCTATTCA 58.370 40.000 0.00 0.00 41.55 2.57
2273 2333 7.256399 TGAGGTACTATTCCCATCCTATTCAT 58.744 38.462 0.00 0.00 41.55 2.57
2274 2334 8.406643 TGAGGTACTATTCCCATCCTATTCATA 58.593 37.037 0.00 0.00 41.55 2.15
2275 2335 9.440761 GAGGTACTATTCCCATCCTATTCATAT 57.559 37.037 0.00 0.00 41.55 1.78
2280 2340 9.574577 ACTATTCCCATCCTATTCATATACCAA 57.425 33.333 0.00 0.00 0.00 3.67
2282 2342 7.888514 TTCCCATCCTATTCATATACCAAGT 57.111 36.000 0.00 0.00 0.00 3.16
2283 2343 7.496346 TCCCATCCTATTCATATACCAAGTC 57.504 40.000 0.00 0.00 0.00 3.01
2284 2344 6.443849 TCCCATCCTATTCATATACCAAGTCC 59.556 42.308 0.00 0.00 0.00 3.85
2285 2345 6.215431 CCCATCCTATTCATATACCAAGTCCA 59.785 42.308 0.00 0.00 0.00 4.02
2286 2346 7.257016 CCCATCCTATTCATATACCAAGTCCAA 60.257 40.741 0.00 0.00 0.00 3.53
2287 2347 7.826252 CCATCCTATTCATATACCAAGTCCAAG 59.174 40.741 0.00 0.00 0.00 3.61
2288 2348 7.316393 TCCTATTCATATACCAAGTCCAAGG 57.684 40.000 0.00 0.00 0.00 3.61
2289 2349 6.272324 TCCTATTCATATACCAAGTCCAAGGG 59.728 42.308 0.00 0.00 0.00 3.95
2290 2350 5.994416 ATTCATATACCAAGTCCAAGGGT 57.006 39.130 0.00 0.00 38.70 4.34
2291 2351 7.236847 CCTATTCATATACCAAGTCCAAGGGTA 59.763 40.741 0.00 0.00 41.12 3.69
2292 2352 6.894735 TTCATATACCAAGTCCAAGGGTAA 57.105 37.500 0.00 0.00 40.33 2.85
2293 2353 6.894735 TCATATACCAAGTCCAAGGGTAAA 57.105 37.500 0.00 0.00 40.33 2.01
2294 2354 7.460214 TCATATACCAAGTCCAAGGGTAAAT 57.540 36.000 0.00 0.00 40.33 1.40
2295 2355 7.287061 TCATATACCAAGTCCAAGGGTAAATG 58.713 38.462 0.00 0.00 40.33 2.32
2296 2356 3.895704 ACCAAGTCCAAGGGTAAATGT 57.104 42.857 0.00 0.00 31.89 2.71
2297 2357 6.645884 ATACCAAGTCCAAGGGTAAATGTA 57.354 37.500 0.00 0.00 40.33 2.29
2298 2358 5.530176 ACCAAGTCCAAGGGTAAATGTAT 57.470 39.130 0.00 0.00 31.89 2.29
2299 2359 5.899278 ACCAAGTCCAAGGGTAAATGTATT 58.101 37.500 0.00 0.00 31.89 1.89
2300 2360 6.319715 ACCAAGTCCAAGGGTAAATGTATTT 58.680 36.000 0.00 0.00 31.89 1.40
2301 2361 6.785466 ACCAAGTCCAAGGGTAAATGTATTTT 59.215 34.615 0.00 0.00 31.89 1.82
2302 2362 7.951245 ACCAAGTCCAAGGGTAAATGTATTTTA 59.049 33.333 0.00 0.00 31.89 1.52
2303 2363 8.808092 CCAAGTCCAAGGGTAAATGTATTTTAA 58.192 33.333 0.00 0.00 31.69 1.52
2304 2364 9.855021 CAAGTCCAAGGGTAAATGTATTTTAAG 57.145 33.333 0.00 0.00 31.69 1.85
2305 2365 9.596308 AAGTCCAAGGGTAAATGTATTTTAAGT 57.404 29.630 0.00 0.00 31.69 2.24
2306 2366 9.020731 AGTCCAAGGGTAAATGTATTTTAAGTG 57.979 33.333 0.00 0.00 31.69 3.16
2557 2617 6.263344 CAATACAAGAAAGATGCACAGATGG 58.737 40.000 0.00 0.00 0.00 3.51
2558 2618 2.490903 ACAAGAAAGATGCACAGATGGC 59.509 45.455 0.00 0.00 0.00 4.40
2559 2619 1.376543 AGAAAGATGCACAGATGGCG 58.623 50.000 0.00 0.00 0.00 5.69
2560 2620 0.248377 GAAAGATGCACAGATGGCGC 60.248 55.000 0.00 0.00 0.00 6.53
2561 2621 0.679002 AAAGATGCACAGATGGCGCT 60.679 50.000 7.64 0.00 0.00 5.92
2562 2622 0.178767 AAGATGCACAGATGGCGCTA 59.821 50.000 7.64 0.00 0.00 4.26
2563 2623 0.531532 AGATGCACAGATGGCGCTAC 60.532 55.000 7.64 0.00 0.00 3.58
2564 2624 1.502163 GATGCACAGATGGCGCTACC 61.502 60.000 7.64 0.00 39.84 3.18
2565 2625 3.264897 GCACAGATGGCGCTACCG 61.265 66.667 7.64 0.00 43.94 4.02
2576 2636 2.971997 CGCTACCGCACATGTATGT 58.028 52.632 0.00 0.00 42.84 2.29
2577 2637 2.128367 CGCTACCGCACATGTATGTA 57.872 50.000 0.00 0.00 39.39 2.29
2578 2638 1.784856 CGCTACCGCACATGTATGTAC 59.215 52.381 0.00 0.00 39.39 2.90
2579 2639 2.796735 CGCTACCGCACATGTATGTACA 60.797 50.000 0.00 0.00 39.39 2.90
2580 2640 3.390135 GCTACCGCACATGTATGTACAT 58.610 45.455 13.93 13.93 40.75 2.29
2591 2651 5.828299 ATGTATGTACATGGAAAAACGGG 57.172 39.130 18.81 0.00 44.66 5.28
2592 2652 3.440872 TGTATGTACATGGAAAAACGGGC 59.559 43.478 18.81 0.00 0.00 6.13
2593 2653 1.249407 TGTACATGGAAAAACGGGCC 58.751 50.000 0.00 0.00 0.00 5.80
2594 2654 0.528924 GTACATGGAAAAACGGGCCC 59.471 55.000 13.57 13.57 0.00 5.80
2595 2655 0.612453 TACATGGAAAAACGGGCCCC 60.612 55.000 18.66 0.00 0.00 5.80
2596 2656 1.910772 CATGGAAAAACGGGCCCCA 60.911 57.895 18.66 6.66 0.00 4.96
2597 2657 1.609210 ATGGAAAAACGGGCCCCAG 60.609 57.895 18.66 5.47 0.00 4.45
2598 2658 2.203582 GGAAAAACGGGCCCCAGT 60.204 61.111 18.66 6.29 0.00 4.00
2599 2659 1.835267 GGAAAAACGGGCCCCAGTT 60.835 57.895 18.66 13.24 0.00 3.16
2600 2660 1.404479 GGAAAAACGGGCCCCAGTTT 61.404 55.000 18.66 18.86 41.72 2.66
2601 2661 4.384720 AAAACGGGCCCCAGTTTT 57.615 50.000 26.19 26.19 43.27 2.43
2602 2662 1.687660 GAAAAACGGGCCCCAGTTTTA 59.312 47.619 29.68 0.00 46.11 1.52
2603 2663 2.018355 AAAACGGGCCCCAGTTTTAT 57.982 45.000 28.89 13.85 45.33 1.40
2604 2664 2.018355 AAACGGGCCCCAGTTTTATT 57.982 45.000 18.66 0.00 37.27 1.40
2605 2665 2.018355 AACGGGCCCCAGTTTTATTT 57.982 45.000 18.66 0.00 0.00 1.40
2606 2666 2.018355 ACGGGCCCCAGTTTTATTTT 57.982 45.000 18.66 0.00 0.00 1.82
2607 2667 3.172471 ACGGGCCCCAGTTTTATTTTA 57.828 42.857 18.66 0.00 0.00 1.52
2608 2668 3.715287 ACGGGCCCCAGTTTTATTTTAT 58.285 40.909 18.66 0.00 0.00 1.40
2609 2669 4.098155 ACGGGCCCCAGTTTTATTTTATT 58.902 39.130 18.66 0.00 0.00 1.40
2610 2670 4.532916 ACGGGCCCCAGTTTTATTTTATTT 59.467 37.500 18.66 0.00 0.00 1.40
2611 2671 4.873259 CGGGCCCCAGTTTTATTTTATTTG 59.127 41.667 18.66 0.00 0.00 2.32
2612 2672 5.337652 CGGGCCCCAGTTTTATTTTATTTGA 60.338 40.000 18.66 0.00 0.00 2.69
2613 2673 6.112734 GGGCCCCAGTTTTATTTTATTTGAG 58.887 40.000 12.23 0.00 0.00 3.02
2614 2674 6.296202 GGGCCCCAGTTTTATTTTATTTGAGT 60.296 38.462 12.23 0.00 0.00 3.41
2615 2675 7.165485 GGCCCCAGTTTTATTTTATTTGAGTT 58.835 34.615 0.00 0.00 0.00 3.01
2616 2676 7.119116 GGCCCCAGTTTTATTTTATTTGAGTTG 59.881 37.037 0.00 0.00 0.00 3.16
2617 2677 7.875554 GCCCCAGTTTTATTTTATTTGAGTTGA 59.124 33.333 0.00 0.00 0.00 3.18
2618 2678 9.771534 CCCCAGTTTTATTTTATTTGAGTTGAA 57.228 29.630 0.00 0.00 0.00 2.69
2624 2684 8.825667 TTTATTTTATTTGAGTTGAACCAGCC 57.174 30.769 0.00 0.00 0.00 4.85
2625 2685 6.670695 ATTTTATTTGAGTTGAACCAGCCT 57.329 33.333 0.00 0.00 0.00 4.58
2626 2686 5.705609 TTTATTTGAGTTGAACCAGCCTC 57.294 39.130 0.00 0.00 0.00 4.70
2627 2687 1.981256 TTTGAGTTGAACCAGCCTCC 58.019 50.000 0.00 0.00 0.00 4.30
2628 2688 0.250295 TTGAGTTGAACCAGCCTCCG 60.250 55.000 0.00 0.00 0.00 4.63
2629 2689 1.118965 TGAGTTGAACCAGCCTCCGA 61.119 55.000 0.00 0.00 0.00 4.55
2630 2690 0.034896 GAGTTGAACCAGCCTCCGAA 59.965 55.000 0.00 0.00 0.00 4.30
2631 2691 0.693049 AGTTGAACCAGCCTCCGAAT 59.307 50.000 0.00 0.00 0.00 3.34
2632 2692 1.073923 AGTTGAACCAGCCTCCGAATT 59.926 47.619 0.00 0.00 0.00 2.17
2633 2693 1.200020 GTTGAACCAGCCTCCGAATTG 59.800 52.381 0.00 0.00 0.00 2.32
2634 2694 0.322456 TGAACCAGCCTCCGAATTGG 60.322 55.000 0.00 0.00 40.09 3.16
2635 2695 0.322546 GAACCAGCCTCCGAATTGGT 60.323 55.000 0.00 0.00 45.47 3.67
2636 2696 0.988832 AACCAGCCTCCGAATTGGTA 59.011 50.000 0.00 0.00 42.86 3.25
2637 2697 0.541863 ACCAGCCTCCGAATTGGTAG 59.458 55.000 0.00 0.00 41.92 3.18
2638 2698 0.541863 CCAGCCTCCGAATTGGTAGT 59.458 55.000 0.00 0.00 39.52 2.73
2639 2699 1.656652 CAGCCTCCGAATTGGTAGTG 58.343 55.000 0.00 0.00 39.52 2.74
2640 2700 0.541863 AGCCTCCGAATTGGTAGTGG 59.458 55.000 0.00 0.00 39.52 4.00
2641 2701 0.463833 GCCTCCGAATTGGTAGTGGG 60.464 60.000 0.00 0.00 39.52 4.61
2642 2702 1.200519 CCTCCGAATTGGTAGTGGGA 58.799 55.000 0.00 0.00 39.52 4.37
2643 2703 1.557832 CCTCCGAATTGGTAGTGGGAA 59.442 52.381 0.00 0.00 39.52 3.97
2644 2704 2.172717 CCTCCGAATTGGTAGTGGGAAT 59.827 50.000 0.00 0.00 39.52 3.01
2645 2705 3.389983 CCTCCGAATTGGTAGTGGGAATA 59.610 47.826 0.00 0.00 39.52 1.75
2646 2706 4.041691 CCTCCGAATTGGTAGTGGGAATAT 59.958 45.833 0.00 0.00 39.52 1.28
2647 2707 4.968259 TCCGAATTGGTAGTGGGAATATG 58.032 43.478 0.00 0.00 39.52 1.78
2648 2708 4.072131 CCGAATTGGTAGTGGGAATATGG 58.928 47.826 0.00 0.00 0.00 2.74
2649 2709 4.445735 CCGAATTGGTAGTGGGAATATGGT 60.446 45.833 0.00 0.00 0.00 3.55
2650 2710 5.130350 CGAATTGGTAGTGGGAATATGGTT 58.870 41.667 0.00 0.00 0.00 3.67
2651 2711 5.592688 CGAATTGGTAGTGGGAATATGGTTT 59.407 40.000 0.00 0.00 0.00 3.27
2652 2712 6.096282 CGAATTGGTAGTGGGAATATGGTTTT 59.904 38.462 0.00 0.00 0.00 2.43
2653 2713 7.418337 AATTGGTAGTGGGAATATGGTTTTC 57.582 36.000 0.00 0.00 0.00 2.29
2654 2714 5.522315 TGGTAGTGGGAATATGGTTTTCA 57.478 39.130 0.00 0.00 0.00 2.69
2655 2715 5.258051 TGGTAGTGGGAATATGGTTTTCAC 58.742 41.667 0.00 0.00 0.00 3.18
2656 2716 5.014755 TGGTAGTGGGAATATGGTTTTCACT 59.985 40.000 0.00 0.00 37.66 3.41
2657 2717 5.949952 GGTAGTGGGAATATGGTTTTCACTT 59.050 40.000 0.00 0.00 35.84 3.16
2658 2718 6.436218 GGTAGTGGGAATATGGTTTTCACTTT 59.564 38.462 0.00 0.00 35.84 2.66
2659 2719 6.590234 AGTGGGAATATGGTTTTCACTTTC 57.410 37.500 0.00 0.00 30.95 2.62
2660 2720 6.074648 AGTGGGAATATGGTTTTCACTTTCA 58.925 36.000 0.00 0.00 30.95 2.69
2661 2721 6.209391 AGTGGGAATATGGTTTTCACTTTCAG 59.791 38.462 0.00 0.00 30.95 3.02
2662 2722 6.015434 GTGGGAATATGGTTTTCACTTTCAGT 60.015 38.462 0.00 0.00 0.00 3.41
2682 2742 7.851822 TCAGTGAAAATTATCGAAGTTTTGC 57.148 32.000 9.55 0.90 33.20 3.68
2683 2743 7.421599 TCAGTGAAAATTATCGAAGTTTTGCA 58.578 30.769 9.55 3.14 33.20 4.08
2684 2744 7.918033 TCAGTGAAAATTATCGAAGTTTTGCAA 59.082 29.630 0.00 0.00 33.20 4.08
2685 2745 8.538856 CAGTGAAAATTATCGAAGTTTTGCAAA 58.461 29.630 8.05 8.05 33.20 3.68
2686 2746 9.260002 AGTGAAAATTATCGAAGTTTTGCAAAT 57.740 25.926 13.65 0.00 33.20 2.32
2687 2747 9.862585 GTGAAAATTATCGAAGTTTTGCAAATT 57.137 25.926 13.65 5.11 33.20 1.82
2692 2752 8.816640 ATTATCGAAGTTTTGCAAATTTCAGT 57.183 26.923 24.64 18.08 0.00 3.41
2693 2753 6.753897 ATCGAAGTTTTGCAAATTTCAGTC 57.246 33.333 24.64 13.05 0.00 3.51
2694 2754 5.645624 TCGAAGTTTTGCAAATTTCAGTCA 58.354 33.333 24.64 5.17 0.00 3.41
2695 2755 5.514914 TCGAAGTTTTGCAAATTTCAGTCAC 59.485 36.000 24.64 14.55 0.00 3.67
2696 2756 5.516339 CGAAGTTTTGCAAATTTCAGTCACT 59.484 36.000 24.64 16.09 0.00 3.41
2697 2757 6.034898 CGAAGTTTTGCAAATTTCAGTCACTT 59.965 34.615 24.64 21.31 0.00 3.16
2698 2758 6.892310 AGTTTTGCAAATTTCAGTCACTTC 57.108 33.333 13.65 0.00 0.00 3.01
2699 2759 5.516339 AGTTTTGCAAATTTCAGTCACTTCG 59.484 36.000 13.65 0.00 0.00 3.79
2700 2760 4.630894 TTGCAAATTTCAGTCACTTCGT 57.369 36.364 0.00 0.00 0.00 3.85
2701 2761 4.630894 TGCAAATTTCAGTCACTTCGTT 57.369 36.364 0.00 0.00 0.00 3.85
2702 2762 5.743026 TGCAAATTTCAGTCACTTCGTTA 57.257 34.783 0.00 0.00 0.00 3.18
2703 2763 6.312399 TGCAAATTTCAGTCACTTCGTTAT 57.688 33.333 0.00 0.00 0.00 1.89
2704 2764 6.142139 TGCAAATTTCAGTCACTTCGTTATG 58.858 36.000 0.00 0.00 0.00 1.90
2705 2765 6.017523 TGCAAATTTCAGTCACTTCGTTATGA 60.018 34.615 0.00 0.00 0.00 2.15
2706 2766 6.855914 GCAAATTTCAGTCACTTCGTTATGAA 59.144 34.615 0.00 0.00 34.74 2.57
2707 2767 7.378461 GCAAATTTCAGTCACTTCGTTATGAAA 59.622 33.333 0.00 0.00 39.96 2.69
2708 2768 9.398170 CAAATTTCAGTCACTTCGTTATGAAAT 57.602 29.630 5.40 5.40 44.79 2.17
2715 2775 9.916397 CAGTCACTTCGTTATGAAATAATTACC 57.084 33.333 0.00 0.00 41.51 2.85
2716 2776 9.886132 AGTCACTTCGTTATGAAATAATTACCT 57.114 29.630 0.00 0.00 41.51 3.08
2740 2800 9.956720 CCTTTTGGTCAGAATATTTCATCATAC 57.043 33.333 0.00 0.00 34.07 2.39
2745 2805 9.764363 TGGTCAGAATATTTCATCATACTACAC 57.236 33.333 0.00 0.00 0.00 2.90
2746 2806 9.764363 GGTCAGAATATTTCATCATACTACACA 57.236 33.333 0.00 0.00 0.00 3.72
2812 2872 9.953565 ATTCATCAGTTGGATTTCAATCAAATT 57.046 25.926 2.04 0.00 37.73 1.82
2813 2873 9.781633 TTCATCAGTTGGATTTCAATCAAATTT 57.218 25.926 2.04 0.00 37.73 1.82
2831 2891 8.655651 TCAAATTTAAGTGAAAATTGTGGTCC 57.344 30.769 1.46 0.00 38.53 4.46
2832 2892 7.713073 TCAAATTTAAGTGAAAATTGTGGTCCC 59.287 33.333 1.46 0.00 38.53 4.46
2833 2893 6.994421 ATTTAAGTGAAAATTGTGGTCCCT 57.006 33.333 0.00 0.00 0.00 4.20
2834 2894 6.800072 TTTAAGTGAAAATTGTGGTCCCTT 57.200 33.333 0.00 0.00 0.00 3.95
2835 2895 4.937201 AAGTGAAAATTGTGGTCCCTTC 57.063 40.909 0.00 0.00 0.00 3.46
2836 2896 2.884639 AGTGAAAATTGTGGTCCCTTCG 59.115 45.455 0.00 0.00 0.00 3.79
2837 2897 1.611491 TGAAAATTGTGGTCCCTTCGC 59.389 47.619 0.00 0.00 0.00 4.70
2838 2898 0.966179 AAAATTGTGGTCCCTTCGCC 59.034 50.000 0.00 0.00 0.00 5.54
2839 2899 1.241315 AAATTGTGGTCCCTTCGCCG 61.241 55.000 0.00 0.00 0.00 6.46
2840 2900 2.119484 AATTGTGGTCCCTTCGCCGA 62.119 55.000 0.00 0.00 0.00 5.54
2841 2901 2.119484 ATTGTGGTCCCTTCGCCGAA 62.119 55.000 0.00 0.00 0.00 4.30
2842 2902 2.031465 GTGGTCCCTTCGCCGAAA 59.969 61.111 0.00 0.00 0.00 3.46
2843 2903 1.376812 GTGGTCCCTTCGCCGAAAT 60.377 57.895 0.00 0.00 0.00 2.17
2844 2904 1.376683 TGGTCCCTTCGCCGAAATG 60.377 57.895 0.00 0.00 0.00 2.32
2845 2905 1.078708 GGTCCCTTCGCCGAAATGA 60.079 57.895 0.00 0.00 0.00 2.57
2846 2906 0.675522 GGTCCCTTCGCCGAAATGAA 60.676 55.000 0.00 0.00 0.00 2.57
2847 2907 1.161843 GTCCCTTCGCCGAAATGAAA 58.838 50.000 0.00 0.00 0.00 2.69
2848 2908 1.538075 GTCCCTTCGCCGAAATGAAAA 59.462 47.619 0.00 0.00 0.00 2.29
2849 2909 1.538075 TCCCTTCGCCGAAATGAAAAC 59.462 47.619 0.00 0.00 0.00 2.43
2850 2910 1.402325 CCCTTCGCCGAAATGAAAACC 60.402 52.381 0.00 0.00 0.00 3.27
2851 2911 1.268352 CCTTCGCCGAAATGAAAACCA 59.732 47.619 0.00 0.00 0.00 3.67
2852 2912 2.287909 CCTTCGCCGAAATGAAAACCAA 60.288 45.455 0.00 0.00 0.00 3.67
2853 2913 2.697431 TCGCCGAAATGAAAACCAAG 57.303 45.000 0.00 0.00 0.00 3.61
2854 2914 1.268352 TCGCCGAAATGAAAACCAAGG 59.732 47.619 0.00 0.00 0.00 3.61
2855 2915 1.268352 CGCCGAAATGAAAACCAAGGA 59.732 47.619 0.00 0.00 0.00 3.36
2856 2916 2.287909 CGCCGAAATGAAAACCAAGGAA 60.288 45.455 0.00 0.00 0.00 3.36
2857 2917 3.723260 GCCGAAATGAAAACCAAGGAAA 58.277 40.909 0.00 0.00 0.00 3.13
2858 2918 3.493129 GCCGAAATGAAAACCAAGGAAAC 59.507 43.478 0.00 0.00 0.00 2.78
2859 2919 3.733727 CCGAAATGAAAACCAAGGAAACG 59.266 43.478 0.00 0.00 0.00 3.60
2860 2920 3.181575 CGAAATGAAAACCAAGGAAACGC 59.818 43.478 0.00 0.00 0.00 4.84
2861 2921 4.368315 GAAATGAAAACCAAGGAAACGCT 58.632 39.130 0.00 0.00 0.00 5.07
2862 2922 5.523438 AAATGAAAACCAAGGAAACGCTA 57.477 34.783 0.00 0.00 0.00 4.26
2863 2923 5.523438 AATGAAAACCAAGGAAACGCTAA 57.477 34.783 0.00 0.00 0.00 3.09
2864 2924 4.985538 TGAAAACCAAGGAAACGCTAAA 57.014 36.364 0.00 0.00 0.00 1.85
2865 2925 5.523438 TGAAAACCAAGGAAACGCTAAAT 57.477 34.783 0.00 0.00 0.00 1.40
2866 2926 5.908341 TGAAAACCAAGGAAACGCTAAATT 58.092 33.333 0.00 0.00 0.00 1.82
2867 2927 5.980715 TGAAAACCAAGGAAACGCTAAATTC 59.019 36.000 0.00 0.00 0.00 2.17
2868 2928 3.824414 ACCAAGGAAACGCTAAATTCG 57.176 42.857 0.00 0.00 0.00 3.34
2869 2929 2.486592 ACCAAGGAAACGCTAAATTCGG 59.513 45.455 0.00 0.00 0.00 4.30
2870 2930 2.486592 CCAAGGAAACGCTAAATTCGGT 59.513 45.455 0.00 0.00 0.00 4.69
2871 2931 3.488489 CAAGGAAACGCTAAATTCGGTG 58.512 45.455 0.00 0.00 0.00 4.94
2872 2932 3.048337 AGGAAACGCTAAATTCGGTGA 57.952 42.857 0.00 0.00 0.00 4.02
2873 2933 3.404899 AGGAAACGCTAAATTCGGTGAA 58.595 40.909 0.00 0.00 0.00 3.18
2874 2934 3.816523 AGGAAACGCTAAATTCGGTGAAA 59.183 39.130 0.00 0.00 0.00 2.69
2875 2935 4.276431 AGGAAACGCTAAATTCGGTGAAAA 59.724 37.500 0.00 0.00 0.00 2.29
2876 2936 5.048294 AGGAAACGCTAAATTCGGTGAAAAT 60.048 36.000 0.00 0.00 0.00 1.82
2877 2937 5.285370 GGAAACGCTAAATTCGGTGAAAATC 59.715 40.000 0.00 0.00 0.00 2.17
2878 2938 5.365403 AACGCTAAATTCGGTGAAAATCA 57.635 34.783 0.00 0.00 0.00 2.57
2879 2939 4.969816 ACGCTAAATTCGGTGAAAATCAG 58.030 39.130 0.00 0.00 0.00 2.90
2880 2940 4.454504 ACGCTAAATTCGGTGAAAATCAGT 59.545 37.500 0.00 0.00 0.00 3.41
2881 2941 5.640357 ACGCTAAATTCGGTGAAAATCAGTA 59.360 36.000 0.00 0.00 0.00 2.74
2882 2942 6.148150 ACGCTAAATTCGGTGAAAATCAGTAA 59.852 34.615 0.00 0.00 0.00 2.24
2883 2943 7.148306 ACGCTAAATTCGGTGAAAATCAGTAAT 60.148 33.333 0.00 0.00 0.00 1.89
2884 2944 8.332464 CGCTAAATTCGGTGAAAATCAGTAATA 58.668 33.333 0.00 0.00 0.00 0.98
2888 2948 6.838198 TTCGGTGAAAATCAGTAATATCGG 57.162 37.500 0.00 0.00 0.00 4.18
2889 2949 4.748102 TCGGTGAAAATCAGTAATATCGGC 59.252 41.667 0.00 0.00 0.00 5.54
2890 2950 4.084013 CGGTGAAAATCAGTAATATCGGCC 60.084 45.833 0.00 0.00 0.00 6.13
2891 2951 4.819630 GGTGAAAATCAGTAATATCGGCCA 59.180 41.667 2.24 0.00 0.00 5.36
2892 2952 5.277828 GGTGAAAATCAGTAATATCGGCCAC 60.278 44.000 2.24 0.00 0.00 5.01
2893 2953 4.509970 TGAAAATCAGTAATATCGGCCACG 59.490 41.667 2.24 0.00 42.74 4.94
2894 2954 2.080286 ATCAGTAATATCGGCCACGC 57.920 50.000 2.24 0.00 40.69 5.34
2895 2955 0.032952 TCAGTAATATCGGCCACGCC 59.967 55.000 2.24 0.00 46.75 5.68
2910 2970 5.173774 GCCACGCCAAATATATGATATGG 57.826 43.478 0.00 0.00 0.00 2.74
2923 2983 4.961438 ATGATATGGCATTCAAAACCCC 57.039 40.909 4.78 0.00 0.00 4.95
2924 2984 3.992999 TGATATGGCATTCAAAACCCCT 58.007 40.909 4.78 0.00 0.00 4.79
2925 2985 5.136068 TGATATGGCATTCAAAACCCCTA 57.864 39.130 4.78 0.00 0.00 3.53
2926 2986 5.523588 TGATATGGCATTCAAAACCCCTAA 58.476 37.500 4.78 0.00 0.00 2.69
2927 2987 5.960811 TGATATGGCATTCAAAACCCCTAAA 59.039 36.000 4.78 0.00 0.00 1.85
2928 2988 6.441924 TGATATGGCATTCAAAACCCCTAAAA 59.558 34.615 4.78 0.00 0.00 1.52
2929 2989 5.574970 ATGGCATTCAAAACCCCTAAAAA 57.425 34.783 0.00 0.00 0.00 1.94
2930 2990 5.574970 TGGCATTCAAAACCCCTAAAAAT 57.425 34.783 0.00 0.00 0.00 1.82
2931 2991 5.312079 TGGCATTCAAAACCCCTAAAAATG 58.688 37.500 0.00 0.00 0.00 2.32
2932 2992 4.155826 GGCATTCAAAACCCCTAAAAATGC 59.844 41.667 8.28 8.28 44.07 3.56
2933 2993 4.759183 GCATTCAAAACCCCTAAAAATGCA 59.241 37.500 11.16 0.00 44.16 3.96
2934 2994 5.240403 GCATTCAAAACCCCTAAAAATGCAA 59.760 36.000 11.16 0.00 44.16 4.08
2935 2995 6.667370 CATTCAAAACCCCTAAAAATGCAAC 58.333 36.000 0.00 0.00 0.00 4.17
2936 2996 5.622346 TCAAAACCCCTAAAAATGCAACT 57.378 34.783 0.00 0.00 0.00 3.16
2937 2997 5.995446 TCAAAACCCCTAAAAATGCAACTT 58.005 33.333 0.00 0.00 0.00 2.66
2938 2998 6.052360 TCAAAACCCCTAAAAATGCAACTTC 58.948 36.000 0.00 0.00 0.00 3.01
2939 2999 5.887214 AAACCCCTAAAAATGCAACTTCT 57.113 34.783 0.00 0.00 0.00 2.85
2940 3000 6.987403 AAACCCCTAAAAATGCAACTTCTA 57.013 33.333 0.00 0.00 0.00 2.10
2941 3001 6.987403 AACCCCTAAAAATGCAACTTCTAA 57.013 33.333 0.00 0.00 0.00 2.10
2942 3002 6.340962 ACCCCTAAAAATGCAACTTCTAAC 57.659 37.500 0.00 0.00 0.00 2.34
2943 3003 5.836358 ACCCCTAAAAATGCAACTTCTAACA 59.164 36.000 0.00 0.00 0.00 2.41
2944 3004 6.156519 CCCCTAAAAATGCAACTTCTAACAC 58.843 40.000 0.00 0.00 0.00 3.32
2945 3005 6.015434 CCCCTAAAAATGCAACTTCTAACACT 60.015 38.462 0.00 0.00 0.00 3.55
2946 3006 7.433680 CCCTAAAAATGCAACTTCTAACACTT 58.566 34.615 0.00 0.00 0.00 3.16
2947 3007 8.573035 CCCTAAAAATGCAACTTCTAACACTTA 58.427 33.333 0.00 0.00 0.00 2.24
2951 3011 9.683069 AAAAATGCAACTTCTAACACTTATCAG 57.317 29.630 0.00 0.00 0.00 2.90
2952 3012 5.862924 TGCAACTTCTAACACTTATCAGC 57.137 39.130 0.00 0.00 0.00 4.26
2953 3013 5.304778 TGCAACTTCTAACACTTATCAGCA 58.695 37.500 0.00 0.00 0.00 4.41
2954 3014 5.409520 TGCAACTTCTAACACTTATCAGCAG 59.590 40.000 0.00 0.00 0.00 4.24
2955 3015 5.409826 GCAACTTCTAACACTTATCAGCAGT 59.590 40.000 0.00 0.00 0.00 4.40
2956 3016 6.401581 GCAACTTCTAACACTTATCAGCAGTC 60.402 42.308 0.00 0.00 0.00 3.51
2957 3017 6.346477 ACTTCTAACACTTATCAGCAGTCA 57.654 37.500 0.00 0.00 0.00 3.41
2958 3018 6.393990 ACTTCTAACACTTATCAGCAGTCAG 58.606 40.000 0.00 0.00 0.00 3.51
2959 3019 6.209589 ACTTCTAACACTTATCAGCAGTCAGA 59.790 38.462 0.00 0.00 0.00 3.27
2960 3020 6.201226 TCTAACACTTATCAGCAGTCAGAG 57.799 41.667 0.00 0.00 0.00 3.35
2961 3021 3.883830 ACACTTATCAGCAGTCAGAGG 57.116 47.619 0.00 0.00 0.00 3.69
2962 3022 3.169099 ACACTTATCAGCAGTCAGAGGT 58.831 45.455 0.00 0.00 0.00 3.85
2963 3023 3.580458 ACACTTATCAGCAGTCAGAGGTT 59.420 43.478 0.00 0.00 0.00 3.50
2964 3024 4.040952 ACACTTATCAGCAGTCAGAGGTTT 59.959 41.667 0.00 0.00 0.00 3.27
2965 3025 4.391216 CACTTATCAGCAGTCAGAGGTTTG 59.609 45.833 0.00 0.00 0.00 2.93
2966 3026 4.284490 ACTTATCAGCAGTCAGAGGTTTGA 59.716 41.667 0.00 0.00 0.00 2.69
2967 3027 2.827800 TCAGCAGTCAGAGGTTTGAG 57.172 50.000 0.00 0.00 0.00 3.02
2968 3028 2.042464 TCAGCAGTCAGAGGTTTGAGT 58.958 47.619 0.00 0.00 0.00 3.41
2969 3029 2.141517 CAGCAGTCAGAGGTTTGAGTG 58.858 52.381 6.50 6.50 46.53 3.51
2970 3030 1.765314 AGCAGTCAGAGGTTTGAGTGT 59.235 47.619 11.26 0.00 45.87 3.55
2971 3031 1.869767 GCAGTCAGAGGTTTGAGTGTG 59.130 52.381 11.26 0.00 45.87 3.82
2972 3032 1.869767 CAGTCAGAGGTTTGAGTGTGC 59.130 52.381 3.31 0.00 41.49 4.57
2973 3033 1.765314 AGTCAGAGGTTTGAGTGTGCT 59.235 47.619 0.00 0.00 29.75 4.40
2974 3034 1.869767 GTCAGAGGTTTGAGTGTGCTG 59.130 52.381 0.00 0.00 0.00 4.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.413018 TTTCATCTTCAGATCACATTCGTG 57.587 37.500 0.00 0.00 45.08 4.35
1 2 7.621428 AATTTCATCTTCAGATCACATTCGT 57.379 32.000 0.00 0.00 31.21 3.85
2 3 8.795341 CAAAATTTCATCTTCAGATCACATTCG 58.205 33.333 0.00 0.00 31.21 3.34
3 4 8.592998 GCAAAATTTCATCTTCAGATCACATTC 58.407 33.333 0.00 0.00 31.21 2.67
4 5 8.092068 TGCAAAATTTCATCTTCAGATCACATT 58.908 29.630 0.00 0.00 31.21 2.71
5 6 7.608153 TGCAAAATTTCATCTTCAGATCACAT 58.392 30.769 0.00 0.00 31.21 3.21
6 7 6.983984 TGCAAAATTTCATCTTCAGATCACA 58.016 32.000 0.00 0.00 31.21 3.58
7 8 7.411588 GCTTGCAAAATTTCATCTTCAGATCAC 60.412 37.037 0.00 0.00 31.21 3.06
8 9 6.588756 GCTTGCAAAATTTCATCTTCAGATCA 59.411 34.615 0.00 0.00 31.21 2.92
9 10 6.035758 GGCTTGCAAAATTTCATCTTCAGATC 59.964 38.462 0.00 0.00 31.21 2.75
10 11 5.873164 GGCTTGCAAAATTTCATCTTCAGAT 59.127 36.000 0.00 0.00 34.56 2.90
11 12 5.232463 GGCTTGCAAAATTTCATCTTCAGA 58.768 37.500 0.00 0.00 0.00 3.27
12 13 4.090930 CGGCTTGCAAAATTTCATCTTCAG 59.909 41.667 0.00 0.00 0.00 3.02
13 14 3.989167 CGGCTTGCAAAATTTCATCTTCA 59.011 39.130 0.00 0.00 0.00 3.02
14 15 3.989817 ACGGCTTGCAAAATTTCATCTTC 59.010 39.130 0.00 0.00 0.00 2.87
15 16 3.993920 ACGGCTTGCAAAATTTCATCTT 58.006 36.364 0.00 0.00 0.00 2.40
16 17 3.665745 ACGGCTTGCAAAATTTCATCT 57.334 38.095 0.00 0.00 0.00 2.90
17 18 5.160641 TCTAACGGCTTGCAAAATTTCATC 58.839 37.500 0.00 0.00 0.00 2.92
18 19 5.132897 TCTAACGGCTTGCAAAATTTCAT 57.867 34.783 0.00 0.00 0.00 2.57
19 20 4.576216 TCTAACGGCTTGCAAAATTTCA 57.424 36.364 0.00 0.00 0.00 2.69
20 21 4.742659 TGTTCTAACGGCTTGCAAAATTTC 59.257 37.500 0.00 0.00 0.00 2.17
21 22 4.688021 TGTTCTAACGGCTTGCAAAATTT 58.312 34.783 0.00 0.00 0.00 1.82
22 23 4.314740 TGTTCTAACGGCTTGCAAAATT 57.685 36.364 0.00 0.00 0.00 1.82
23 24 4.519540 ATGTTCTAACGGCTTGCAAAAT 57.480 36.364 0.00 0.00 0.00 1.82
24 25 4.314740 AATGTTCTAACGGCTTGCAAAA 57.685 36.364 0.00 0.00 0.00 2.44
25 26 4.047822 CAAATGTTCTAACGGCTTGCAAA 58.952 39.130 0.00 0.00 0.00 3.68
26 27 3.067461 ACAAATGTTCTAACGGCTTGCAA 59.933 39.130 0.00 0.00 0.00 4.08
27 28 2.621055 ACAAATGTTCTAACGGCTTGCA 59.379 40.909 0.00 0.00 0.00 4.08
28 29 3.234386 GACAAATGTTCTAACGGCTTGC 58.766 45.455 0.00 0.00 0.00 4.01
29 30 4.481930 TGACAAATGTTCTAACGGCTTG 57.518 40.909 0.00 0.00 0.00 4.01
30 31 5.067283 ACTTTGACAAATGTTCTAACGGCTT 59.933 36.000 0.05 0.00 0.00 4.35
31 32 4.578928 ACTTTGACAAATGTTCTAACGGCT 59.421 37.500 0.05 0.00 0.00 5.52
32 33 4.855531 ACTTTGACAAATGTTCTAACGGC 58.144 39.130 0.05 0.00 0.00 5.68
33 34 6.491394 TGAACTTTGACAAATGTTCTAACGG 58.509 36.000 26.01 8.76 44.69 4.44
34 35 7.855409 TGATGAACTTTGACAAATGTTCTAACG 59.145 33.333 26.01 9.28 44.69 3.18
35 36 8.958043 GTGATGAACTTTGACAAATGTTCTAAC 58.042 33.333 26.01 20.73 44.69 2.34
36 37 8.681806 TGTGATGAACTTTGACAAATGTTCTAA 58.318 29.630 26.01 16.63 44.69 2.10
37 38 8.219546 TGTGATGAACTTTGACAAATGTTCTA 57.780 30.769 26.01 18.95 44.69 2.10
38 39 7.099266 TGTGATGAACTTTGACAAATGTTCT 57.901 32.000 26.01 18.41 44.69 3.01
39 40 7.754069 TTGTGATGAACTTTGACAAATGTTC 57.246 32.000 22.74 22.74 44.67 3.18
40 41 8.545229 TTTTGTGATGAACTTTGACAAATGTT 57.455 26.923 12.57 12.57 36.64 2.71
41 42 8.545229 TTTTTGTGATGAACTTTGACAAATGT 57.455 26.923 0.05 0.00 36.64 2.71
100 101 6.452494 TCGGGTGAACAGTAAAATCAAAAA 57.548 33.333 0.00 0.00 0.00 1.94
101 102 5.506649 GCTCGGGTGAACAGTAAAATCAAAA 60.507 40.000 0.00 0.00 0.00 2.44
102 103 4.023536 GCTCGGGTGAACAGTAAAATCAAA 60.024 41.667 0.00 0.00 0.00 2.69
103 104 3.500680 GCTCGGGTGAACAGTAAAATCAA 59.499 43.478 0.00 0.00 0.00 2.57
104 105 3.071479 GCTCGGGTGAACAGTAAAATCA 58.929 45.455 0.00 0.00 0.00 2.57
105 106 3.335579 AGCTCGGGTGAACAGTAAAATC 58.664 45.455 0.00 0.00 0.00 2.17
106 107 3.244422 TGAGCTCGGGTGAACAGTAAAAT 60.244 43.478 9.64 0.00 0.00 1.82
107 108 2.103432 TGAGCTCGGGTGAACAGTAAAA 59.897 45.455 9.64 0.00 0.00 1.52
108 109 1.689813 TGAGCTCGGGTGAACAGTAAA 59.310 47.619 9.64 0.00 0.00 2.01
109 110 1.334160 TGAGCTCGGGTGAACAGTAA 58.666 50.000 9.64 0.00 0.00 2.24
110 111 1.557099 ATGAGCTCGGGTGAACAGTA 58.443 50.000 9.64 0.00 0.00 2.74
111 112 0.687354 AATGAGCTCGGGTGAACAGT 59.313 50.000 9.64 0.00 0.00 3.55
112 113 1.466167 CAAATGAGCTCGGGTGAACAG 59.534 52.381 9.64 0.00 0.00 3.16
113 114 1.071542 TCAAATGAGCTCGGGTGAACA 59.928 47.619 9.64 0.00 0.00 3.18
114 115 1.734465 CTCAAATGAGCTCGGGTGAAC 59.266 52.381 9.64 0.00 35.13 3.18
115 116 2.099141 CTCAAATGAGCTCGGGTGAA 57.901 50.000 9.64 0.00 35.13 3.18
116 117 3.840831 CTCAAATGAGCTCGGGTGA 57.159 52.632 9.64 10.63 35.13 4.02
125 126 2.166459 TCTACACCCGAGCTCAAATGAG 59.834 50.000 15.40 6.05 44.75 2.90
126 127 2.176045 TCTACACCCGAGCTCAAATGA 58.824 47.619 15.40 0.00 0.00 2.57
127 128 2.672961 TCTACACCCGAGCTCAAATG 57.327 50.000 15.40 10.33 0.00 2.32
128 129 3.961408 AGTATCTACACCCGAGCTCAAAT 59.039 43.478 15.40 0.00 0.00 2.32
129 130 3.362706 AGTATCTACACCCGAGCTCAAA 58.637 45.455 15.40 0.00 0.00 2.69
130 131 2.950309 GAGTATCTACACCCGAGCTCAA 59.050 50.000 15.40 0.00 0.00 3.02
131 132 2.573369 GAGTATCTACACCCGAGCTCA 58.427 52.381 15.40 0.00 0.00 4.26
132 133 1.881324 GGAGTATCTACACCCGAGCTC 59.119 57.143 2.73 2.73 31.75 4.09
133 134 1.214673 TGGAGTATCTACACCCGAGCT 59.785 52.381 0.00 0.00 36.30 4.09
134 135 1.337387 GTGGAGTATCTACACCCGAGC 59.663 57.143 1.03 0.00 46.89 5.03
142 143 5.576895 GTTAACTGGACGTGGAGTATCTAC 58.423 45.833 0.00 0.00 43.91 2.59
143 144 4.333649 CGTTAACTGGACGTGGAGTATCTA 59.666 45.833 3.71 0.00 35.88 1.98
144 145 3.128242 CGTTAACTGGACGTGGAGTATCT 59.872 47.826 3.71 0.00 35.88 1.98
145 146 3.127548 TCGTTAACTGGACGTGGAGTATC 59.872 47.826 3.71 0.00 41.08 2.24
146 147 3.084039 TCGTTAACTGGACGTGGAGTAT 58.916 45.455 3.71 0.00 41.08 2.12
147 148 2.503331 TCGTTAACTGGACGTGGAGTA 58.497 47.619 3.71 0.00 41.08 2.59
148 149 1.321474 TCGTTAACTGGACGTGGAGT 58.679 50.000 3.71 0.00 41.08 3.85
149 150 2.325761 CTTCGTTAACTGGACGTGGAG 58.674 52.381 3.71 0.00 41.08 3.86
150 151 1.603678 GCTTCGTTAACTGGACGTGGA 60.604 52.381 3.71 0.00 41.08 4.02
151 152 0.788391 GCTTCGTTAACTGGACGTGG 59.212 55.000 3.71 0.00 41.08 4.94
152 153 1.493772 TGCTTCGTTAACTGGACGTG 58.506 50.000 3.71 0.00 41.08 4.49
153 154 2.334838 GATGCTTCGTTAACTGGACGT 58.665 47.619 3.71 0.00 41.08 4.34
154 155 1.659098 GGATGCTTCGTTAACTGGACG 59.341 52.381 3.71 0.00 41.62 4.79
155 156 2.695359 TGGATGCTTCGTTAACTGGAC 58.305 47.619 3.71 0.00 0.00 4.02
156 157 3.531538 GATGGATGCTTCGTTAACTGGA 58.468 45.455 3.71 0.00 0.00 3.86
157 158 2.614057 GGATGGATGCTTCGTTAACTGG 59.386 50.000 3.71 0.00 0.00 4.00
158 159 3.270027 TGGATGGATGCTTCGTTAACTG 58.730 45.455 3.71 0.00 0.00 3.16
173 174 2.684881 GTGTGCTGGTATCTTTGGATGG 59.315 50.000 0.00 0.00 33.71 3.51
243 249 2.810274 TCAGACAAGTTCAGATTGCTGC 59.190 45.455 0.00 0.00 42.01 5.25
272 278 1.808133 CGCTATCCTTCTGACCTTGCC 60.808 57.143 0.00 0.00 0.00 4.52
294 300 2.643933 GCACAAATGCCTTCTTCTCC 57.356 50.000 0.00 0.00 46.97 3.71
444 464 1.811679 CCTCCTCGCTCGCTTTTCC 60.812 63.158 0.00 0.00 0.00 3.13
461 481 1.365368 GCTCGGCTGCTTCTTCTTCC 61.365 60.000 0.00 0.00 0.00 3.46
1017 1042 0.650512 CTGTTCGCTCGTGTGTTTGT 59.349 50.000 0.00 0.00 0.00 2.83
1020 1045 0.384309 TCTCTGTTCGCTCGTGTGTT 59.616 50.000 0.00 0.00 0.00 3.32
1045 1071 4.664677 GTCTGTGTCGCCGTGCCT 62.665 66.667 0.00 0.00 0.00 4.75
1047 1073 3.406361 CTGTCTGTGTCGCCGTGC 61.406 66.667 0.00 0.00 0.00 5.34
1051 1077 2.031163 AAGCCTGTCTGTGTCGCC 59.969 61.111 0.00 0.00 0.00 5.54
1073 1099 1.611261 CGTACCACCTTCCCCCTCA 60.611 63.158 0.00 0.00 0.00 3.86
1092 1118 1.080772 GAGTGCACGTCCATGTCGA 60.081 57.895 12.01 0.00 0.00 4.20
1836 1871 4.841617 TCGATCTCCGGCAGGCCT 62.842 66.667 0.00 0.00 39.14 5.19
2088 2148 3.538614 CCATCCGGGACTCGATGT 58.461 61.111 0.00 0.00 42.43 3.06
2106 2166 6.555315 CATACTTGATCCCAGCAACTAAAAC 58.445 40.000 0.00 0.00 0.00 2.43
2147 2207 4.177165 ACCACGTACACGAATACAATGA 57.823 40.909 9.04 0.00 43.02 2.57
2149 2209 5.713025 AGTTACCACGTACACGAATACAAT 58.287 37.500 9.04 0.00 43.02 2.71
2151 2211 4.764679 AGTTACCACGTACACGAATACA 57.235 40.909 9.04 0.00 43.02 2.29
2152 2212 5.153513 TCAAGTTACCACGTACACGAATAC 58.846 41.667 9.04 0.00 43.02 1.89
2153 2213 5.369685 TCAAGTTACCACGTACACGAATA 57.630 39.130 9.04 0.00 43.02 1.75
2154 2214 4.241590 TCAAGTTACCACGTACACGAAT 57.758 40.909 9.04 0.00 43.02 3.34
2156 2216 3.252944 TGATCAAGTTACCACGTACACGA 59.747 43.478 9.04 0.00 43.02 4.35
2157 2217 3.567530 TGATCAAGTTACCACGTACACG 58.432 45.455 0.00 0.00 46.33 4.49
2158 2218 7.766219 ATATTGATCAAGTTACCACGTACAC 57.234 36.000 14.54 0.00 0.00 2.90
2198 2258 9.850628 GCATGCACATATATATTGATCAAGTTT 57.149 29.630 14.21 0.00 0.00 2.66
2199 2259 8.464404 GGCATGCACATATATATTGATCAAGTT 58.536 33.333 21.36 6.25 0.00 2.66
2200 2260 7.612633 TGGCATGCACATATATATTGATCAAGT 59.387 33.333 21.36 7.73 0.00 3.16
2201 2261 7.992008 TGGCATGCACATATATATTGATCAAG 58.008 34.615 21.36 0.72 0.00 3.02
2202 2262 7.941431 TGGCATGCACATATATATTGATCAA 57.059 32.000 21.36 11.26 0.00 2.57
2203 2263 7.996644 AGATGGCATGCACATATATATTGATCA 59.003 33.333 21.36 2.15 0.00 2.92
2204 2264 8.392372 AGATGGCATGCACATATATATTGATC 57.608 34.615 21.36 5.67 0.00 2.92
2211 2271 8.877195 TGAGATATAGATGGCATGCACATATAT 58.123 33.333 25.68 25.68 36.84 0.86
2212 2272 8.146412 GTGAGATATAGATGGCATGCACATATA 58.854 37.037 21.36 19.94 0.00 0.86
2213 2273 6.990939 GTGAGATATAGATGGCATGCACATAT 59.009 38.462 21.36 18.53 0.00 1.78
2214 2274 6.155737 AGTGAGATATAGATGGCATGCACATA 59.844 38.462 21.36 8.93 0.00 2.29
2215 2275 5.045797 AGTGAGATATAGATGGCATGCACAT 60.046 40.000 21.36 19.41 0.00 3.21
2216 2276 4.285260 AGTGAGATATAGATGGCATGCACA 59.715 41.667 21.36 15.35 0.00 4.57
2217 2277 4.829968 AGTGAGATATAGATGGCATGCAC 58.170 43.478 21.36 9.64 0.00 4.57
2218 2278 5.247792 AGAAGTGAGATATAGATGGCATGCA 59.752 40.000 21.36 6.13 0.00 3.96
2219 2279 5.732633 AGAAGTGAGATATAGATGGCATGC 58.267 41.667 9.90 9.90 0.00 4.06
2220 2280 8.530311 AGTTAGAAGTGAGATATAGATGGCATG 58.470 37.037 3.81 0.00 0.00 4.06
2221 2281 8.663209 AGTTAGAAGTGAGATATAGATGGCAT 57.337 34.615 0.00 0.00 0.00 4.40
2222 2282 8.484214 AAGTTAGAAGTGAGATATAGATGGCA 57.516 34.615 0.00 0.00 0.00 4.92
2223 2283 9.202273 CAAAGTTAGAAGTGAGATATAGATGGC 57.798 37.037 0.00 0.00 0.00 4.40
2227 2287 9.702253 ACCTCAAAGTTAGAAGTGAGATATAGA 57.298 33.333 3.54 0.00 39.94 1.98
2230 2290 9.482175 AGTACCTCAAAGTTAGAAGTGAGATAT 57.518 33.333 3.54 0.00 39.94 1.63
2231 2291 8.880991 AGTACCTCAAAGTTAGAAGTGAGATA 57.119 34.615 3.54 0.00 39.94 1.98
2232 2292 7.784470 AGTACCTCAAAGTTAGAAGTGAGAT 57.216 36.000 3.54 0.00 39.94 2.75
2233 2293 8.880991 ATAGTACCTCAAAGTTAGAAGTGAGA 57.119 34.615 3.54 0.00 39.94 3.27
2234 2294 9.575783 GAATAGTACCTCAAAGTTAGAAGTGAG 57.424 37.037 0.00 0.00 37.77 3.51
2235 2295 8.529476 GGAATAGTACCTCAAAGTTAGAAGTGA 58.471 37.037 0.00 0.00 0.00 3.41
2236 2296 7.764901 GGGAATAGTACCTCAAAGTTAGAAGTG 59.235 40.741 0.00 0.00 0.00 3.16
2237 2297 7.456902 TGGGAATAGTACCTCAAAGTTAGAAGT 59.543 37.037 0.00 0.00 0.00 3.01
2238 2298 7.848128 TGGGAATAGTACCTCAAAGTTAGAAG 58.152 38.462 0.00 0.00 0.00 2.85
2239 2299 7.801893 TGGGAATAGTACCTCAAAGTTAGAA 57.198 36.000 0.00 0.00 0.00 2.10
2240 2300 7.070821 GGATGGGAATAGTACCTCAAAGTTAGA 59.929 40.741 0.00 0.00 0.00 2.10
2241 2301 7.071321 AGGATGGGAATAGTACCTCAAAGTTAG 59.929 40.741 0.00 0.00 0.00 2.34
2242 2302 6.906901 AGGATGGGAATAGTACCTCAAAGTTA 59.093 38.462 0.00 0.00 0.00 2.24
2243 2303 5.731678 AGGATGGGAATAGTACCTCAAAGTT 59.268 40.000 0.00 0.00 0.00 2.66
2244 2304 5.289510 AGGATGGGAATAGTACCTCAAAGT 58.710 41.667 0.00 0.00 0.00 2.66
2245 2305 5.896073 AGGATGGGAATAGTACCTCAAAG 57.104 43.478 0.00 0.00 0.00 2.77
2246 2306 7.570982 TGAATAGGATGGGAATAGTACCTCAAA 59.429 37.037 0.00 0.00 0.00 2.69
2247 2307 7.079700 TGAATAGGATGGGAATAGTACCTCAA 58.920 38.462 0.00 0.00 0.00 3.02
2248 2308 6.630131 TGAATAGGATGGGAATAGTACCTCA 58.370 40.000 0.00 0.00 0.00 3.86
2249 2309 7.741554 ATGAATAGGATGGGAATAGTACCTC 57.258 40.000 0.00 0.00 0.00 3.85
2254 2314 9.574577 TTGGTATATGAATAGGATGGGAATAGT 57.425 33.333 0.00 0.00 0.00 2.12
2256 2316 9.574577 ACTTGGTATATGAATAGGATGGGAATA 57.425 33.333 0.00 0.00 0.00 1.75
2257 2317 8.468547 ACTTGGTATATGAATAGGATGGGAAT 57.531 34.615 0.00 0.00 0.00 3.01
2258 2318 7.037586 GGACTTGGTATATGAATAGGATGGGAA 60.038 40.741 0.00 0.00 0.00 3.97
2259 2319 6.443849 GGACTTGGTATATGAATAGGATGGGA 59.556 42.308 0.00 0.00 0.00 4.37
2260 2320 6.215431 TGGACTTGGTATATGAATAGGATGGG 59.785 42.308 0.00 0.00 0.00 4.00
2261 2321 7.257790 TGGACTTGGTATATGAATAGGATGG 57.742 40.000 0.00 0.00 0.00 3.51
2262 2322 7.826252 CCTTGGACTTGGTATATGAATAGGATG 59.174 40.741 0.00 0.00 0.00 3.51
2263 2323 7.037297 CCCTTGGACTTGGTATATGAATAGGAT 60.037 40.741 0.00 0.00 0.00 3.24
2264 2324 6.272324 CCCTTGGACTTGGTATATGAATAGGA 59.728 42.308 0.00 0.00 0.00 2.94
2265 2325 6.044404 ACCCTTGGACTTGGTATATGAATAGG 59.956 42.308 0.00 0.00 0.00 2.57
2266 2326 7.079451 ACCCTTGGACTTGGTATATGAATAG 57.921 40.000 0.00 0.00 0.00 1.73
2267 2327 8.570038 TTACCCTTGGACTTGGTATATGAATA 57.430 34.615 0.00 0.00 34.73 1.75
2268 2328 5.994416 ACCCTTGGACTTGGTATATGAAT 57.006 39.130 0.00 0.00 0.00 2.57
2269 2329 6.894735 TTACCCTTGGACTTGGTATATGAA 57.105 37.500 0.00 0.00 34.73 2.57
2270 2330 6.894735 TTTACCCTTGGACTTGGTATATGA 57.105 37.500 0.00 0.00 34.73 2.15
2271 2331 7.060421 ACATTTACCCTTGGACTTGGTATATG 58.940 38.462 13.35 13.35 43.66 1.78
2272 2332 7.220890 ACATTTACCCTTGGACTTGGTATAT 57.779 36.000 0.00 0.00 34.73 0.86
2273 2333 6.645884 ACATTTACCCTTGGACTTGGTATA 57.354 37.500 0.00 0.00 34.73 1.47
2274 2334 5.530176 ACATTTACCCTTGGACTTGGTAT 57.470 39.130 0.00 0.00 34.73 2.73
2275 2335 6.645884 ATACATTTACCCTTGGACTTGGTA 57.354 37.500 0.00 0.00 33.55 3.25
2276 2336 3.895704 ACATTTACCCTTGGACTTGGT 57.104 42.857 0.00 0.00 36.15 3.67
2277 2337 6.850752 AAATACATTTACCCTTGGACTTGG 57.149 37.500 0.00 0.00 0.00 3.61
2278 2338 9.855021 CTTAAAATACATTTACCCTTGGACTTG 57.145 33.333 0.00 0.00 33.26 3.16
2279 2339 9.596308 ACTTAAAATACATTTACCCTTGGACTT 57.404 29.630 0.00 0.00 33.26 3.01
2280 2340 9.020731 CACTTAAAATACATTTACCCTTGGACT 57.979 33.333 0.00 0.00 33.26 3.85
2533 2593 6.263344 CCATCTGTGCATCTTTCTTGTATTG 58.737 40.000 0.00 0.00 0.00 1.90
2534 2594 5.163581 GCCATCTGTGCATCTTTCTTGTATT 60.164 40.000 0.00 0.00 0.00 1.89
2535 2595 4.337555 GCCATCTGTGCATCTTTCTTGTAT 59.662 41.667 0.00 0.00 0.00 2.29
2536 2596 3.691118 GCCATCTGTGCATCTTTCTTGTA 59.309 43.478 0.00 0.00 0.00 2.41
2537 2597 2.490903 GCCATCTGTGCATCTTTCTTGT 59.509 45.455 0.00 0.00 0.00 3.16
2538 2598 2.477357 CGCCATCTGTGCATCTTTCTTG 60.477 50.000 0.00 0.00 0.00 3.02
2539 2599 1.741706 CGCCATCTGTGCATCTTTCTT 59.258 47.619 0.00 0.00 0.00 2.52
2540 2600 1.376543 CGCCATCTGTGCATCTTTCT 58.623 50.000 0.00 0.00 0.00 2.52
2541 2601 3.911989 CGCCATCTGTGCATCTTTC 57.088 52.632 0.00 0.00 0.00 2.62
2549 2609 3.264897 GCGGTAGCGCCATCTGTG 61.265 66.667 28.01 0.00 36.97 3.66
2558 2618 4.100284 ATGTACATACATGTGCGGTAGCG 61.100 47.826 6.56 10.57 45.00 4.26
2559 2619 2.816689 TGTACATACATGTGCGGTAGC 58.183 47.619 9.11 4.43 44.82 3.58
2570 2630 3.440872 GCCCGTTTTTCCATGTACATACA 59.559 43.478 8.32 0.00 40.98 2.29
2571 2631 3.181494 GGCCCGTTTTTCCATGTACATAC 60.181 47.826 8.32 0.96 0.00 2.39
2572 2632 3.018149 GGCCCGTTTTTCCATGTACATA 58.982 45.455 8.32 0.00 0.00 2.29
2573 2633 1.822371 GGCCCGTTTTTCCATGTACAT 59.178 47.619 1.41 1.41 0.00 2.29
2574 2634 1.249407 GGCCCGTTTTTCCATGTACA 58.751 50.000 0.00 0.00 0.00 2.90
2575 2635 0.528924 GGGCCCGTTTTTCCATGTAC 59.471 55.000 5.69 0.00 0.00 2.90
2576 2636 0.612453 GGGGCCCGTTTTTCCATGTA 60.612 55.000 17.79 0.00 0.00 2.29
2577 2637 1.911269 GGGGCCCGTTTTTCCATGT 60.911 57.895 17.79 0.00 0.00 3.21
2578 2638 1.887344 CTGGGGCCCGTTTTTCCATG 61.887 60.000 19.83 0.00 0.00 3.66
2579 2639 1.609210 CTGGGGCCCGTTTTTCCAT 60.609 57.895 19.83 0.00 0.00 3.41
2580 2640 2.203567 CTGGGGCCCGTTTTTCCA 60.204 61.111 19.83 4.91 0.00 3.53
2581 2641 1.404479 AAACTGGGGCCCGTTTTTCC 61.404 55.000 28.21 3.63 30.64 3.13
2582 2642 0.466543 AAAACTGGGGCCCGTTTTTC 59.533 50.000 33.16 10.11 37.13 2.29
2583 2643 1.790818 TAAAACTGGGGCCCGTTTTT 58.209 45.000 38.13 33.28 39.20 1.94
2584 2644 2.018355 ATAAAACTGGGGCCCGTTTT 57.982 45.000 36.62 36.62 40.38 2.43
2585 2645 2.018355 AATAAAACTGGGGCCCGTTT 57.982 45.000 28.21 28.21 34.00 3.60
2586 2646 2.018355 AAATAAAACTGGGGCCCGTT 57.982 45.000 19.83 21.04 0.00 4.44
2587 2647 2.018355 AAAATAAAACTGGGGCCCGT 57.982 45.000 19.83 16.10 0.00 5.28
2588 2648 4.746535 AATAAAATAAAACTGGGGCCCG 57.253 40.909 19.83 15.38 0.00 6.13
2589 2649 6.056090 TCAAATAAAATAAAACTGGGGCCC 57.944 37.500 18.17 18.17 0.00 5.80
2590 2650 6.707290 ACTCAAATAAAATAAAACTGGGGCC 58.293 36.000 0.00 0.00 0.00 5.80
2591 2651 7.875554 TCAACTCAAATAAAATAAAACTGGGGC 59.124 33.333 0.00 0.00 0.00 5.80
2592 2652 9.771534 TTCAACTCAAATAAAATAAAACTGGGG 57.228 29.630 0.00 0.00 0.00 4.96
2598 2658 9.267084 GGCTGGTTCAACTCAAATAAAATAAAA 57.733 29.630 0.00 0.00 0.00 1.52
2599 2659 8.646900 AGGCTGGTTCAACTCAAATAAAATAAA 58.353 29.630 0.00 0.00 0.00 1.40
2600 2660 8.189119 AGGCTGGTTCAACTCAAATAAAATAA 57.811 30.769 0.00 0.00 0.00 1.40
2601 2661 7.093945 GGAGGCTGGTTCAACTCAAATAAAATA 60.094 37.037 0.00 0.00 0.00 1.40
2602 2662 6.295292 GGAGGCTGGTTCAACTCAAATAAAAT 60.295 38.462 0.00 0.00 0.00 1.82
2603 2663 5.010617 GGAGGCTGGTTCAACTCAAATAAAA 59.989 40.000 0.00 0.00 0.00 1.52
2604 2664 4.522789 GGAGGCTGGTTCAACTCAAATAAA 59.477 41.667 0.00 0.00 0.00 1.40
2605 2665 4.079253 GGAGGCTGGTTCAACTCAAATAA 58.921 43.478 0.00 0.00 0.00 1.40
2606 2666 3.686016 GGAGGCTGGTTCAACTCAAATA 58.314 45.455 0.00 0.00 0.00 1.40
2607 2667 2.519013 GGAGGCTGGTTCAACTCAAAT 58.481 47.619 0.00 0.00 0.00 2.32
2608 2668 1.813862 CGGAGGCTGGTTCAACTCAAA 60.814 52.381 0.00 0.00 0.00 2.69
2609 2669 0.250295 CGGAGGCTGGTTCAACTCAA 60.250 55.000 0.00 0.00 0.00 3.02
2610 2670 1.118965 TCGGAGGCTGGTTCAACTCA 61.119 55.000 0.00 0.00 0.00 3.41
2611 2671 0.034896 TTCGGAGGCTGGTTCAACTC 59.965 55.000 0.00 0.00 0.00 3.01
2612 2672 0.693049 ATTCGGAGGCTGGTTCAACT 59.307 50.000 0.00 0.00 0.00 3.16
2613 2673 1.200020 CAATTCGGAGGCTGGTTCAAC 59.800 52.381 0.00 0.00 0.00 3.18
2614 2674 1.533625 CAATTCGGAGGCTGGTTCAA 58.466 50.000 0.00 0.00 0.00 2.69
2615 2675 0.322456 CCAATTCGGAGGCTGGTTCA 60.322 55.000 0.00 0.00 36.56 3.18
2616 2676 0.322546 ACCAATTCGGAGGCTGGTTC 60.323 55.000 0.00 0.00 39.14 3.62
2617 2677 0.988832 TACCAATTCGGAGGCTGGTT 59.011 50.000 11.47 0.37 42.23 3.67
2618 2678 0.541863 CTACCAATTCGGAGGCTGGT 59.458 55.000 0.00 11.11 44.37 4.00
2619 2679 0.541863 ACTACCAATTCGGAGGCTGG 59.458 55.000 0.00 0.00 38.63 4.85
2620 2680 1.656652 CACTACCAATTCGGAGGCTG 58.343 55.000 0.00 0.00 38.63 4.85
2621 2681 0.541863 CCACTACCAATTCGGAGGCT 59.458 55.000 0.00 0.00 38.63 4.58
2622 2682 0.463833 CCCACTACCAATTCGGAGGC 60.464 60.000 1.54 0.00 38.63 4.70
2623 2683 1.200519 TCCCACTACCAATTCGGAGG 58.799 55.000 1.54 0.00 38.63 4.30
2624 2684 3.560636 ATTCCCACTACCAATTCGGAG 57.439 47.619 1.54 0.00 38.63 4.63
2625 2685 4.202419 CCATATTCCCACTACCAATTCGGA 60.202 45.833 1.54 0.00 38.63 4.55
2626 2686 4.072131 CCATATTCCCACTACCAATTCGG 58.928 47.826 0.00 0.00 42.50 4.30
2627 2687 4.714632 ACCATATTCCCACTACCAATTCG 58.285 43.478 0.00 0.00 0.00 3.34
2628 2688 7.123547 TGAAAACCATATTCCCACTACCAATTC 59.876 37.037 0.00 0.00 0.00 2.17
2629 2689 6.957020 TGAAAACCATATTCCCACTACCAATT 59.043 34.615 0.00 0.00 0.00 2.32
2630 2690 6.379988 GTGAAAACCATATTCCCACTACCAAT 59.620 38.462 0.00 0.00 0.00 3.16
2631 2691 5.712917 GTGAAAACCATATTCCCACTACCAA 59.287 40.000 0.00 0.00 0.00 3.67
2632 2692 5.014755 AGTGAAAACCATATTCCCACTACCA 59.985 40.000 0.00 0.00 32.39 3.25
2633 2693 5.506708 AGTGAAAACCATATTCCCACTACC 58.493 41.667 0.00 0.00 32.39 3.18
2634 2694 7.175990 TGAAAGTGAAAACCATATTCCCACTAC 59.824 37.037 0.00 0.00 33.61 2.73
2635 2695 7.235079 TGAAAGTGAAAACCATATTCCCACTA 58.765 34.615 0.00 0.00 33.61 2.74
2636 2696 6.074648 TGAAAGTGAAAACCATATTCCCACT 58.925 36.000 0.00 0.00 35.22 4.00
2637 2697 6.339587 TGAAAGTGAAAACCATATTCCCAC 57.660 37.500 0.00 0.00 0.00 4.61
2638 2698 6.588719 CTGAAAGTGAAAACCATATTCCCA 57.411 37.500 0.00 0.00 0.00 4.37
2656 2716 8.751335 GCAAAACTTCGATAATTTTCACTGAAA 58.249 29.630 0.00 0.00 0.00 2.69
2657 2717 7.918033 TGCAAAACTTCGATAATTTTCACTGAA 59.082 29.630 0.00 0.00 0.00 3.02
2658 2718 7.421599 TGCAAAACTTCGATAATTTTCACTGA 58.578 30.769 0.00 0.00 0.00 3.41
2659 2719 7.621832 TGCAAAACTTCGATAATTTTCACTG 57.378 32.000 0.00 0.00 0.00 3.66
2660 2720 8.641499 TTTGCAAAACTTCGATAATTTTCACT 57.359 26.923 10.02 0.00 0.00 3.41
2661 2721 9.862585 AATTTGCAAAACTTCGATAATTTTCAC 57.137 25.926 17.19 0.00 0.00 3.18
2666 2726 9.260002 ACTGAAATTTGCAAAACTTCGATAATT 57.740 25.926 17.19 0.00 0.00 1.40
2667 2727 8.816640 ACTGAAATTTGCAAAACTTCGATAAT 57.183 26.923 17.19 4.87 0.00 1.28
2668 2728 7.918033 TGACTGAAATTTGCAAAACTTCGATAA 59.082 29.630 17.19 5.12 0.00 1.75
2669 2729 7.378461 GTGACTGAAATTTGCAAAACTTCGATA 59.622 33.333 17.19 5.98 0.00 2.92
2670 2730 6.198966 GTGACTGAAATTTGCAAAACTTCGAT 59.801 34.615 17.19 12.84 0.00 3.59
2671 2731 5.514914 GTGACTGAAATTTGCAAAACTTCGA 59.485 36.000 17.19 11.08 0.00 3.71
2672 2732 5.516339 AGTGACTGAAATTTGCAAAACTTCG 59.484 36.000 17.19 17.35 0.00 3.79
2673 2733 6.892310 AGTGACTGAAATTTGCAAAACTTC 57.108 33.333 17.19 20.10 0.00 3.01
2674 2734 6.034898 CGAAGTGACTGAAATTTGCAAAACTT 59.965 34.615 17.19 17.19 0.00 2.66
2675 2735 5.516339 CGAAGTGACTGAAATTTGCAAAACT 59.484 36.000 17.19 9.42 0.00 2.66
2676 2736 5.288472 ACGAAGTGACTGAAATTTGCAAAAC 59.712 36.000 17.19 11.14 42.51 2.43
2677 2737 5.406649 ACGAAGTGACTGAAATTTGCAAAA 58.593 33.333 17.19 0.00 42.51 2.44
2678 2738 4.992688 ACGAAGTGACTGAAATTTGCAAA 58.007 34.783 15.44 15.44 42.51 3.68
2679 2739 4.630894 ACGAAGTGACTGAAATTTGCAA 57.369 36.364 0.00 0.00 42.51 4.08
2680 2740 4.630894 AACGAAGTGACTGAAATTTGCA 57.369 36.364 0.00 0.00 45.00 4.08
2681 2741 6.370593 TCATAACGAAGTGACTGAAATTTGC 58.629 36.000 0.00 0.00 45.00 3.68
2682 2742 8.781067 TTTCATAACGAAGTGACTGAAATTTG 57.219 30.769 0.00 0.00 45.00 2.32
2689 2749 9.916397 GGTAATTATTTCATAACGAAGTGACTG 57.084 33.333 0.00 0.00 45.00 3.51
2690 2750 9.886132 AGGTAATTATTTCATAACGAAGTGACT 57.114 29.630 0.00 0.00 45.00 3.41
2711 2771 9.527157 TGATGAAATATTCTGACCAAAAGGTAA 57.473 29.630 0.00 0.00 0.00 2.85
2712 2772 9.699410 ATGATGAAATATTCTGACCAAAAGGTA 57.301 29.630 0.00 0.00 0.00 3.08
2713 2773 8.599624 ATGATGAAATATTCTGACCAAAAGGT 57.400 30.769 0.00 0.00 0.00 3.50
2714 2774 9.956720 GTATGATGAAATATTCTGACCAAAAGG 57.043 33.333 0.00 0.00 0.00 3.11
2719 2779 9.764363 GTGTAGTATGATGAAATATTCTGACCA 57.236 33.333 0.00 0.00 0.00 4.02
2720 2780 9.764363 TGTGTAGTATGATGAAATATTCTGACC 57.236 33.333 0.00 0.00 0.00 4.02
2786 2846 9.953565 AATTTGATTGAAATCCAACTGATGAAT 57.046 25.926 0.72 0.00 37.63 2.57
2787 2847 9.781633 AAATTTGATTGAAATCCAACTGATGAA 57.218 25.926 0.72 0.00 37.63 2.57
2805 2865 9.271828 GGACCACAATTTTCACTTAAATTTGAT 57.728 29.630 0.00 0.00 39.28 2.57
2806 2866 7.713073 GGGACCACAATTTTCACTTAAATTTGA 59.287 33.333 0.00 0.00 39.28 2.69
2807 2867 7.714813 AGGGACCACAATTTTCACTTAAATTTG 59.285 33.333 0.00 0.00 41.21 2.32
2808 2868 7.801104 AGGGACCACAATTTTCACTTAAATTT 58.199 30.769 0.00 0.00 35.98 1.82
2809 2869 7.373617 AGGGACCACAATTTTCACTTAAATT 57.626 32.000 0.00 0.00 38.02 1.82
2810 2870 6.994421 AGGGACCACAATTTTCACTTAAAT 57.006 33.333 0.00 0.00 0.00 1.40
2811 2871 6.460399 CGAAGGGACCACAATTTTCACTTAAA 60.460 38.462 0.00 0.00 33.01 1.52
2812 2872 5.009210 CGAAGGGACCACAATTTTCACTTAA 59.991 40.000 0.00 0.00 33.01 1.85
2813 2873 4.517453 CGAAGGGACCACAATTTTCACTTA 59.483 41.667 0.00 0.00 33.01 2.24
2814 2874 3.317993 CGAAGGGACCACAATTTTCACTT 59.682 43.478 0.00 0.00 35.65 3.16
2815 2875 2.884639 CGAAGGGACCACAATTTTCACT 59.115 45.455 0.00 0.00 0.00 3.41
2816 2876 2.607038 GCGAAGGGACCACAATTTTCAC 60.607 50.000 0.00 0.00 0.00 3.18
2817 2877 1.611491 GCGAAGGGACCACAATTTTCA 59.389 47.619 0.00 0.00 0.00 2.69
2818 2878 1.067846 GGCGAAGGGACCACAATTTTC 60.068 52.381 0.00 0.00 0.00 2.29
2819 2879 0.966179 GGCGAAGGGACCACAATTTT 59.034 50.000 0.00 0.00 0.00 1.82
2820 2880 1.241315 CGGCGAAGGGACCACAATTT 61.241 55.000 0.00 0.00 0.00 1.82
2821 2881 1.674322 CGGCGAAGGGACCACAATT 60.674 57.895 0.00 0.00 0.00 2.32
2822 2882 2.046314 CGGCGAAGGGACCACAAT 60.046 61.111 0.00 0.00 0.00 2.71
2823 2883 2.326773 TTTCGGCGAAGGGACCACAA 62.327 55.000 22.52 1.27 0.00 3.33
2824 2884 2.119484 ATTTCGGCGAAGGGACCACA 62.119 55.000 22.52 5.60 0.00 4.17
2825 2885 1.376812 ATTTCGGCGAAGGGACCAC 60.377 57.895 22.52 0.00 0.00 4.16
2826 2886 1.376683 CATTTCGGCGAAGGGACCA 60.377 57.895 22.52 7.19 0.00 4.02
2827 2887 0.675522 TTCATTTCGGCGAAGGGACC 60.676 55.000 22.52 0.00 0.00 4.46
2828 2888 1.161843 TTTCATTTCGGCGAAGGGAC 58.838 50.000 22.52 0.00 0.00 4.46
2829 2889 1.538075 GTTTTCATTTCGGCGAAGGGA 59.462 47.619 22.52 19.69 0.00 4.20
2830 2890 1.402325 GGTTTTCATTTCGGCGAAGGG 60.402 52.381 22.52 17.77 0.00 3.95
2831 2891 1.268352 TGGTTTTCATTTCGGCGAAGG 59.732 47.619 22.52 18.12 0.00 3.46
2832 2892 2.697431 TGGTTTTCATTTCGGCGAAG 57.303 45.000 22.52 12.34 0.00 3.79
2833 2893 2.287909 CCTTGGTTTTCATTTCGGCGAA 60.288 45.455 19.83 19.83 0.00 4.70
2834 2894 1.268352 CCTTGGTTTTCATTTCGGCGA 59.732 47.619 4.99 4.99 0.00 5.54
2835 2895 1.268352 TCCTTGGTTTTCATTTCGGCG 59.732 47.619 0.00 0.00 0.00 6.46
2836 2896 3.378911 TTCCTTGGTTTTCATTTCGGC 57.621 42.857 0.00 0.00 0.00 5.54
2837 2897 3.733727 CGTTTCCTTGGTTTTCATTTCGG 59.266 43.478 0.00 0.00 0.00 4.30
2838 2898 3.181575 GCGTTTCCTTGGTTTTCATTTCG 59.818 43.478 0.00 0.00 0.00 3.46
2839 2899 4.368315 AGCGTTTCCTTGGTTTTCATTTC 58.632 39.130 0.00 0.00 0.00 2.17
2840 2900 4.400529 AGCGTTTCCTTGGTTTTCATTT 57.599 36.364 0.00 0.00 0.00 2.32
2841 2901 5.523438 TTAGCGTTTCCTTGGTTTTCATT 57.477 34.783 0.00 0.00 0.00 2.57
2842 2902 5.523438 TTTAGCGTTTCCTTGGTTTTCAT 57.477 34.783 0.00 0.00 0.00 2.57
2843 2903 4.985538 TTTAGCGTTTCCTTGGTTTTCA 57.014 36.364 0.00 0.00 0.00 2.69
2844 2904 5.116528 CGAATTTAGCGTTTCCTTGGTTTTC 59.883 40.000 0.00 0.00 0.00 2.29
2845 2905 4.979815 CGAATTTAGCGTTTCCTTGGTTTT 59.020 37.500 0.00 0.00 0.00 2.43
2846 2906 4.542735 CGAATTTAGCGTTTCCTTGGTTT 58.457 39.130 0.00 0.00 0.00 3.27
2847 2907 3.057806 CCGAATTTAGCGTTTCCTTGGTT 60.058 43.478 0.00 0.00 0.00 3.67
2848 2908 2.486592 CCGAATTTAGCGTTTCCTTGGT 59.513 45.455 0.00 0.00 0.00 3.67
2849 2909 2.486592 ACCGAATTTAGCGTTTCCTTGG 59.513 45.455 0.00 0.00 0.00 3.61
2850 2910 3.187637 TCACCGAATTTAGCGTTTCCTTG 59.812 43.478 0.00 0.00 0.00 3.61
2851 2911 3.404899 TCACCGAATTTAGCGTTTCCTT 58.595 40.909 0.00 0.00 0.00 3.36
2852 2912 3.048337 TCACCGAATTTAGCGTTTCCT 57.952 42.857 0.00 0.00 0.00 3.36
2853 2913 3.817148 TTCACCGAATTTAGCGTTTCC 57.183 42.857 0.00 0.00 0.00 3.13
2854 2914 5.854338 TGATTTTCACCGAATTTAGCGTTTC 59.146 36.000 0.00 0.00 0.00 2.78
2855 2915 5.764131 TGATTTTCACCGAATTTAGCGTTT 58.236 33.333 0.00 0.00 0.00 3.60
2856 2916 5.048991 ACTGATTTTCACCGAATTTAGCGTT 60.049 36.000 0.00 0.00 0.00 4.84
2857 2917 4.454504 ACTGATTTTCACCGAATTTAGCGT 59.545 37.500 0.00 0.00 0.00 5.07
2858 2918 4.969816 ACTGATTTTCACCGAATTTAGCG 58.030 39.130 0.00 0.00 0.00 4.26
2862 2922 8.342634 CCGATATTACTGATTTTCACCGAATTT 58.657 33.333 0.00 0.00 0.00 1.82
2863 2923 7.519970 GCCGATATTACTGATTTTCACCGAATT 60.520 37.037 0.00 0.00 0.00 2.17
2864 2924 6.073222 GCCGATATTACTGATTTTCACCGAAT 60.073 38.462 0.00 0.00 0.00 3.34
2865 2925 5.235616 GCCGATATTACTGATTTTCACCGAA 59.764 40.000 0.00 0.00 0.00 4.30
2866 2926 4.748102 GCCGATATTACTGATTTTCACCGA 59.252 41.667 0.00 0.00 0.00 4.69
2867 2927 4.084013 GGCCGATATTACTGATTTTCACCG 60.084 45.833 0.00 0.00 0.00 4.94
2868 2928 4.819630 TGGCCGATATTACTGATTTTCACC 59.180 41.667 0.00 0.00 0.00 4.02
2869 2929 5.558273 CGTGGCCGATATTACTGATTTTCAC 60.558 44.000 0.00 0.00 35.63 3.18
2870 2930 4.509970 CGTGGCCGATATTACTGATTTTCA 59.490 41.667 0.00 0.00 35.63 2.69
2871 2931 4.610680 GCGTGGCCGATATTACTGATTTTC 60.611 45.833 0.00 0.00 35.63 2.29
2872 2932 3.250040 GCGTGGCCGATATTACTGATTTT 59.750 43.478 0.00 0.00 35.63 1.82
2873 2933 2.806244 GCGTGGCCGATATTACTGATTT 59.194 45.455 0.00 0.00 35.63 2.17
2874 2934 2.413837 GCGTGGCCGATATTACTGATT 58.586 47.619 0.00 0.00 35.63 2.57
2875 2935 1.337823 GGCGTGGCCGATATTACTGAT 60.338 52.381 0.00 0.00 39.62 2.90
2876 2936 0.032952 GGCGTGGCCGATATTACTGA 59.967 55.000 0.00 0.00 39.62 3.41
2877 2937 2.528797 GGCGTGGCCGATATTACTG 58.471 57.895 0.00 0.00 39.62 2.74
2888 2948 4.498009 GCCATATCATATATTTGGCGTGGC 60.498 45.833 15.08 15.08 42.97 5.01
2889 2949 5.173774 GCCATATCATATATTTGGCGTGG 57.826 43.478 8.99 1.62 42.97 4.94
2897 2957 8.761689 GGGGTTTTGAATGCCATATCATATATT 58.238 33.333 0.00 0.00 0.00 1.28
2898 2958 8.124430 AGGGGTTTTGAATGCCATATCATATAT 58.876 33.333 0.00 0.00 0.00 0.86
2899 2959 7.477864 AGGGGTTTTGAATGCCATATCATATA 58.522 34.615 0.00 0.00 0.00 0.86
2900 2960 6.325352 AGGGGTTTTGAATGCCATATCATAT 58.675 36.000 0.00 0.00 0.00 1.78
2901 2961 5.714863 AGGGGTTTTGAATGCCATATCATA 58.285 37.500 0.00 0.00 0.00 2.15
2902 2962 4.559726 AGGGGTTTTGAATGCCATATCAT 58.440 39.130 0.00 0.00 0.00 2.45
2903 2963 3.992999 AGGGGTTTTGAATGCCATATCA 58.007 40.909 0.00 0.00 0.00 2.15
2904 2964 6.478512 TTTAGGGGTTTTGAATGCCATATC 57.521 37.500 0.00 0.00 0.00 1.63
2905 2965 6.882768 TTTTAGGGGTTTTGAATGCCATAT 57.117 33.333 0.00 0.00 0.00 1.78
2906 2966 6.688073 TTTTTAGGGGTTTTGAATGCCATA 57.312 33.333 0.00 0.00 0.00 2.74
2907 2967 5.574970 TTTTTAGGGGTTTTGAATGCCAT 57.425 34.783 0.00 0.00 0.00 4.40
2908 2968 5.312079 CATTTTTAGGGGTTTTGAATGCCA 58.688 37.500 0.00 0.00 0.00 4.92
2909 2969 4.155826 GCATTTTTAGGGGTTTTGAATGCC 59.844 41.667 6.84 0.00 40.98 4.40
2910 2970 4.759183 TGCATTTTTAGGGGTTTTGAATGC 59.241 37.500 10.28 10.28 44.76 3.56
2911 2971 6.486320 AGTTGCATTTTTAGGGGTTTTGAATG 59.514 34.615 0.00 0.00 0.00 2.67
2912 2972 6.600388 AGTTGCATTTTTAGGGGTTTTGAAT 58.400 32.000 0.00 0.00 0.00 2.57
2913 2973 5.995446 AGTTGCATTTTTAGGGGTTTTGAA 58.005 33.333 0.00 0.00 0.00 2.69
2914 2974 5.622346 AGTTGCATTTTTAGGGGTTTTGA 57.378 34.783 0.00 0.00 0.00 2.69
2915 2975 6.054941 AGAAGTTGCATTTTTAGGGGTTTTG 58.945 36.000 0.00 0.00 0.00 2.44
2916 2976 6.247229 AGAAGTTGCATTTTTAGGGGTTTT 57.753 33.333 0.00 0.00 0.00 2.43
2917 2977 5.887214 AGAAGTTGCATTTTTAGGGGTTT 57.113 34.783 0.00 0.00 0.00 3.27
2918 2978 6.325286 TGTTAGAAGTTGCATTTTTAGGGGTT 59.675 34.615 0.00 0.00 0.00 4.11
2919 2979 5.836358 TGTTAGAAGTTGCATTTTTAGGGGT 59.164 36.000 0.00 0.00 0.00 4.95
2920 2980 6.015434 AGTGTTAGAAGTTGCATTTTTAGGGG 60.015 38.462 0.00 0.00 0.00 4.79
2921 2981 6.981722 AGTGTTAGAAGTTGCATTTTTAGGG 58.018 36.000 0.00 0.00 0.00 3.53
2925 2985 9.683069 CTGATAAGTGTTAGAAGTTGCATTTTT 57.317 29.630 0.00 0.00 0.00 1.94
2926 2986 7.809806 GCTGATAAGTGTTAGAAGTTGCATTTT 59.190 33.333 0.00 0.00 0.00 1.82
2927 2987 7.040478 TGCTGATAAGTGTTAGAAGTTGCATTT 60.040 33.333 0.00 0.00 0.00 2.32
2928 2988 6.430925 TGCTGATAAGTGTTAGAAGTTGCATT 59.569 34.615 0.00 0.00 0.00 3.56
2929 2989 5.939883 TGCTGATAAGTGTTAGAAGTTGCAT 59.060 36.000 0.00 0.00 0.00 3.96
2930 2990 5.304778 TGCTGATAAGTGTTAGAAGTTGCA 58.695 37.500 0.00 0.00 0.00 4.08
2931 2991 5.409826 ACTGCTGATAAGTGTTAGAAGTTGC 59.590 40.000 0.00 0.00 0.00 4.17
2932 2992 6.646653 TGACTGCTGATAAGTGTTAGAAGTTG 59.353 38.462 0.00 0.00 29.23 3.16
2933 2993 6.759272 TGACTGCTGATAAGTGTTAGAAGTT 58.241 36.000 0.00 0.00 29.23 2.66
2934 2994 6.209589 TCTGACTGCTGATAAGTGTTAGAAGT 59.790 38.462 0.00 0.00 31.75 3.01
2935 2995 6.625362 TCTGACTGCTGATAAGTGTTAGAAG 58.375 40.000 0.00 0.00 0.00 2.85
2936 2996 6.350528 CCTCTGACTGCTGATAAGTGTTAGAA 60.351 42.308 0.00 0.00 0.00 2.10
2937 2997 5.126222 CCTCTGACTGCTGATAAGTGTTAGA 59.874 44.000 0.00 0.00 0.00 2.10
2938 2998 5.105554 ACCTCTGACTGCTGATAAGTGTTAG 60.106 44.000 0.00 0.00 0.00 2.34
2939 2999 4.772624 ACCTCTGACTGCTGATAAGTGTTA 59.227 41.667 0.00 0.00 0.00 2.41
2940 3000 3.580458 ACCTCTGACTGCTGATAAGTGTT 59.420 43.478 0.00 0.00 0.00 3.32
2941 3001 3.169099 ACCTCTGACTGCTGATAAGTGT 58.831 45.455 0.00 0.00 0.00 3.55
2942 3002 3.883830 ACCTCTGACTGCTGATAAGTG 57.116 47.619 0.00 0.00 0.00 3.16
2943 3003 4.284490 TCAAACCTCTGACTGCTGATAAGT 59.716 41.667 0.00 0.00 0.00 2.24
2944 3004 4.825422 TCAAACCTCTGACTGCTGATAAG 58.175 43.478 0.00 0.00 0.00 1.73
2945 3005 4.284490 ACTCAAACCTCTGACTGCTGATAA 59.716 41.667 0.00 0.00 0.00 1.75
2946 3006 3.834813 ACTCAAACCTCTGACTGCTGATA 59.165 43.478 0.00 0.00 0.00 2.15
2947 3007 2.636893 ACTCAAACCTCTGACTGCTGAT 59.363 45.455 0.00 0.00 0.00 2.90
2948 3008 2.042464 ACTCAAACCTCTGACTGCTGA 58.958 47.619 0.00 0.00 0.00 4.26
2949 3009 2.141517 CACTCAAACCTCTGACTGCTG 58.858 52.381 0.00 0.00 0.00 4.41
2950 3010 1.765314 ACACTCAAACCTCTGACTGCT 59.235 47.619 0.00 0.00 0.00 4.24
2951 3011 1.869767 CACACTCAAACCTCTGACTGC 59.130 52.381 0.00 0.00 0.00 4.40
2952 3012 1.869767 GCACACTCAAACCTCTGACTG 59.130 52.381 0.00 0.00 0.00 3.51
2953 3013 1.765314 AGCACACTCAAACCTCTGACT 59.235 47.619 0.00 0.00 0.00 3.41
2954 3014 1.869767 CAGCACACTCAAACCTCTGAC 59.130 52.381 0.00 0.00 0.00 3.51
2955 3015 2.245159 CAGCACACTCAAACCTCTGA 57.755 50.000 0.00 0.00 0.00 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.