Multiple sequence alignment - TraesCS3A01G446200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3A01G446200 chr3A 100.000 7665 0 0 1 7665 686761381 686769045 0.000000e+00 14155.0
1 TraesCS3A01G446200 chr3A 81.643 414 72 3 2472 2885 742622179 742621770 2.650000e-89 340.0
2 TraesCS3A01G446200 chr3A 81.870 353 60 4 2539 2888 697638351 697638702 2.090000e-75 294.0
3 TraesCS3A01G446200 chr3A 81.759 307 42 12 2463 2759 446471050 446471352 2.140000e-60 244.0
4 TraesCS3A01G446200 chr3A 80.608 263 35 12 2240 2488 446470099 446470359 1.020000e-43 189.0
5 TraesCS3A01G446200 chr3A 95.536 112 5 0 6759 6870 149248288 149248177 6.110000e-41 180.0
6 TraesCS3A01G446200 chr3A 93.162 117 8 0 6756 6872 176897608 176897724 1.020000e-38 172.0
7 TraesCS3A01G446200 chr3A 93.617 94 6 0 1300 1393 176160075 176159982 2.880000e-29 141.0
8 TraesCS3A01G446200 chr3D 94.218 3061 108 30 3229 6273 549492748 549495755 0.000000e+00 4608.0
9 TraesCS3A01G446200 chr3D 92.051 1409 59 21 1 1397 549489060 549490427 0.000000e+00 1932.0
10 TraesCS3A01G446200 chr3D 90.783 1150 61 26 1765 2887 268128402 268129533 0.000000e+00 1495.0
11 TraesCS3A01G446200 chr3D 87.724 725 73 14 2186 2900 101545467 101546185 0.000000e+00 832.0
12 TraesCS3A01G446200 chr3D 82.414 580 48 28 1471 2047 549490530 549491058 2.520000e-124 457.0
13 TraesCS3A01G446200 chr3D 89.446 379 17 12 6281 6656 549495800 549496158 2.520000e-124 457.0
14 TraesCS3A01G446200 chr3D 86.080 352 45 4 2539 2888 562532234 562532583 7.260000e-100 375.0
15 TraesCS3A01G446200 chr3D 90.391 281 26 1 2676 2956 549491187 549491466 1.220000e-97 368.0
16 TraesCS3A01G446200 chr3D 83.525 261 40 3 2472 2731 300145625 300145883 2.760000e-59 241.0
17 TraesCS3A01G446200 chr3D 81.029 311 44 11 2181 2488 330635928 330636226 4.620000e-57 233.0
18 TraesCS3A01G446200 chr3D 96.296 135 5 0 3229 3363 549491758 549491892 1.000000e-53 222.0
19 TraesCS3A01G446200 chr3D 85.492 193 26 2 1202 1393 153494254 153494445 4.690000e-47 200.0
20 TraesCS3A01G446200 chr3D 86.525 141 17 2 2200 2339 84114091 84114230 3.700000e-33 154.0
21 TraesCS3A01G446200 chr3D 89.431 123 10 3 6056 6177 549496038 549496158 1.330000e-32 152.0
22 TraesCS3A01G446200 chr3D 89.908 109 10 1 6650 6757 549504836 549504944 1.040000e-28 139.0
23 TraesCS3A01G446200 chr3B 94.872 2457 104 11 3230 5674 728902517 728904963 0.000000e+00 3819.0
24 TraesCS3A01G446200 chr3B 88.769 1754 88 38 1 1725 728899781 728901454 0.000000e+00 2047.0
25 TraesCS3A01G446200 chr3B 93.148 613 34 7 5672 6281 728905044 728905651 0.000000e+00 893.0
26 TraesCS3A01G446200 chr3B 92.143 420 27 5 6341 6757 728905785 728906201 8.570000e-164 588.0
27 TraesCS3A01G446200 chr3B 94.737 209 10 1 2958 3165 728902292 728902500 2.670000e-84 324.0
28 TraesCS3A01G446200 chr3B 83.969 262 38 4 2472 2731 421093752 421093493 1.650000e-61 248.0
29 TraesCS3A01G446200 chr3B 86.010 193 25 2 1202 1393 225167015 225167206 1.010000e-48 206.0
30 TraesCS3A01G446200 chr3B 90.789 76 1 5 6280 6353 728905682 728905753 6.330000e-16 97.1
31 TraesCS3A01G446200 chr6A 84.915 590 65 22 6871 7448 501706652 501707229 6.670000e-160 575.0
32 TraesCS3A01G446200 chr6A 90.227 440 38 5 6871 7307 501775117 501775554 3.100000e-158 569.0
33 TraesCS3A01G446200 chr6A 88.692 451 47 4 6870 7317 261042984 261042535 1.450000e-151 547.0
34 TraesCS3A01G446200 chr6A 81.034 290 39 10 2474 2760 376482494 376482218 4.660000e-52 217.0
35 TraesCS3A01G446200 chr6A 79.018 224 32 6 2166 2376 160446266 160446487 1.040000e-28 139.0
36 TraesCS3A01G446200 chr6A 78.431 204 38 4 2683 2885 506636040 506635842 2.250000e-25 128.0
37 TraesCS3A01G446200 chr6A 96.970 33 0 1 1765 1796 503718086 503718118 4.000000e-03 54.7
38 TraesCS3A01G446200 chr4A 89.977 439 40 4 6871 7307 110302835 110302399 1.440000e-156 564.0
39 TraesCS3A01G446200 chr4A 92.000 125 10 0 6758 6882 329137621 329137497 7.910000e-40 176.0
40 TraesCS3A01G446200 chr4A 92.308 117 8 1 6756 6872 518294789 518294904 1.710000e-36 165.0
41 TraesCS3A01G446200 chr4A 85.443 158 19 4 2183 2339 166301171 166301325 2.210000e-35 161.0
42 TraesCS3A01G446200 chr7A 88.793 464 42 10 6871 7329 163675137 163674679 1.870000e-155 560.0
43 TraesCS3A01G446200 chr7A 88.248 468 43 10 6872 7332 353528173 353528635 4.040000e-152 549.0
44 TraesCS3A01G446200 chr7A 85.660 530 63 12 6871 7392 308458828 308458304 5.230000e-151 545.0
45 TraesCS3A01G446200 chr7A 85.277 523 65 12 6871 7385 314661430 314661948 5.270000e-146 529.0
46 TraesCS3A01G446200 chr7A 94.643 112 6 0 6761 6872 391128782 391128893 2.840000e-39 174.0
47 TraesCS3A01G446200 chr7A 91.935 124 8 2 6756 6878 401232760 401232638 1.020000e-38 172.0
48 TraesCS3A01G446200 chr7A 82.090 134 9 4 2172 2302 602472703 602472824 4.890000e-17 100.0
49 TraesCS3A01G446200 chr7A 95.000 40 1 1 1765 1804 11865273 11865235 2.310000e-05 62.1
50 TraesCS3A01G446200 chr7A 95.000 40 1 1 1765 1804 11911175 11911137 2.310000e-05 62.1
51 TraesCS3A01G446200 chr7A 95.000 40 1 1 1765 1804 11964683 11964645 2.310000e-05 62.1
52 TraesCS3A01G446200 chr7A 95.000 40 1 1 1765 1804 496834594 496834632 2.310000e-05 62.1
53 TraesCS3A01G446200 chr1A 84.704 523 64 15 6871 7383 165724186 165724702 6.860000e-140 508.0
54 TraesCS3A01G446200 chr1A 95.000 40 1 1 1765 1804 583152482 583152520 2.310000e-05 62.1
55 TraesCS3A01G446200 chr7B 85.330 409 53 5 2476 2884 704480484 704480083 4.280000e-112 416.0
56 TraesCS3A01G446200 chr7B 94.444 36 0 2 1765 1799 80853709 80853675 4.000000e-03 54.7
57 TraesCS3A01G446200 chr7B 100.000 29 0 0 3167 3195 426843551 426843523 4.000000e-03 54.7
58 TraesCS3A01G446200 chr5A 84.797 296 38 5 2472 2761 544459988 544460282 2.710000e-74 291.0
59 TraesCS3A01G446200 chr5A 95.726 117 5 0 6756 6872 354375047 354375163 1.020000e-43 189.0
60 TraesCS3A01G446200 chr5A 90.551 127 10 2 6756 6881 354361873 354361998 4.760000e-37 167.0
61 TraesCS3A01G446200 chr5A 100.000 29 0 0 3167 3195 421821319 421821347 4.000000e-03 54.7
62 TraesCS3A01G446200 chr1B 79.688 384 50 8 2505 2886 677515874 677515517 1.280000e-62 252.0
63 TraesCS3A01G446200 chr1B 95.000 40 1 1 1765 1804 558229069 558229107 2.310000e-05 62.1
64 TraesCS3A01G446200 chr1B 88.889 45 2 2 1763 1804 181218830 181218874 1.400000e-02 52.8
65 TraesCS3A01G446200 chr2A 91.860 172 12 2 7475 7645 68757244 68757414 9.940000e-59 239.0
66 TraesCS3A01G446200 chr2A 90.909 176 14 2 7471 7645 68768761 68768935 1.290000e-57 235.0
67 TraesCS3A01G446200 chr2A 92.216 167 12 1 7475 7640 68785684 68785850 1.290000e-57 235.0
68 TraesCS3A01G446200 chr2A 90.341 176 15 2 7471 7645 68781137 68781311 5.980000e-56 230.0
69 TraesCS3A01G446200 chr2A 86.316 190 24 2 1205 1393 448509118 448508930 1.010000e-48 206.0
70 TraesCS3A01G446200 chr2A 92.308 117 8 1 6756 6872 379200448 379200563 1.710000e-36 165.0
71 TraesCS3A01G446200 chr6D 86.792 212 24 4 2676 2886 436522675 436522467 4.620000e-57 233.0
72 TraesCS3A01G446200 chr6D 81.061 132 23 2 2209 2339 404616768 404616898 3.780000e-18 104.0
73 TraesCS3A01G446200 chr6D 94.872 39 1 1 1766 1804 335448941 335448904 8.310000e-05 60.2
74 TraesCS3A01G446200 chr2D 85.789 190 25 2 1205 1393 338671006 338670818 4.690000e-47 200.0
75 TraesCS3A01G446200 chr2D 79.649 285 34 9 2192 2472 21930075 21929811 4.720000e-42 183.0
76 TraesCS3A01G446200 chr2D 81.159 207 30 7 2683 2887 576288688 576288489 2.860000e-34 158.0
77 TraesCS3A01G446200 chr5B 85.870 184 22 4 2675 2855 371771029 371770847 7.850000e-45 193.0
78 TraesCS3A01G446200 chr5B 83.491 212 27 8 2172 2376 371771231 371771021 2.820000e-44 191.0
79 TraesCS3A01G446200 chr5B 92.308 39 3 0 1765 1803 94288336 94288298 1.000000e-03 56.5
80 TraesCS3A01G446200 chr2B 84.656 189 27 2 1205 1393 405275144 405274958 3.650000e-43 187.0
81 TraesCS3A01G446200 chr7D 75.181 415 78 18 2473 2886 453131605 453131995 1.020000e-38 172.0
82 TraesCS3A01G446200 chr7D 90.476 42 2 2 1765 1806 1146876 1146837 4.000000e-03 54.7
83 TraesCS3A01G446200 chr7D 100.000 29 0 0 1765 1793 584709836 584709864 4.000000e-03 54.7
84 TraesCS3A01G446200 chr6B 86.331 139 17 2 2202 2339 420831486 420831623 4.790000e-32 150.0
85 TraesCS3A01G446200 chr6B 80.247 162 26 5 2179 2339 689530248 689530404 4.860000e-22 117.0
86 TraesCS3A01G446200 chr6B 95.000 40 1 1 1765 1804 637972572 637972534 2.310000e-05 62.1
87 TraesCS3A01G446200 chr6B 94.872 39 1 1 1766 1804 34216202 34216239 8.310000e-05 60.2
88 TraesCS3A01G446200 chr5D 83.088 136 22 1 2587 2721 474748938 474749073 1.040000e-23 122.0
89 TraesCS3A01G446200 chr5D 84.211 133 8 2 2171 2302 173388109 173387989 4.860000e-22 117.0
90 TraesCS3A01G446200 chr4D 95.000 40 1 1 1765 1804 210462411 210462449 2.310000e-05 62.1
91 TraesCS3A01G446200 chr4B 95.000 40 1 1 1765 1804 328927448 328927410 2.310000e-05 62.1
92 TraesCS3A01G446200 chr4B 100.000 28 0 0 1764 1791 507228168 507228195 1.400000e-02 52.8
93 TraesCS3A01G446200 chr1D 90.698 43 2 2 1765 1807 452752789 452752829 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3A01G446200 chr3A 686761381 686769045 7664 False 14155.000000 14155 100.000000 1 7665 1 chr3A.!!$F2 7664
1 TraesCS3A01G446200 chr3A 446470099 446471352 1253 False 216.500000 244 81.183500 2240 2759 2 chr3A.!!$F4 519
2 TraesCS3A01G446200 chr3D 268128402 268129533 1131 False 1495.000000 1495 90.783000 1765 2887 1 chr3D.!!$F4 1122
3 TraesCS3A01G446200 chr3D 549489060 549496158 7098 False 1170.857143 4608 90.606714 1 6656 7 chr3D.!!$F9 6655
4 TraesCS3A01G446200 chr3D 101545467 101546185 718 False 832.000000 832 87.724000 2186 2900 1 chr3D.!!$F2 714
5 TraesCS3A01G446200 chr3B 728899781 728906201 6420 False 1294.683333 3819 92.409667 1 6757 6 chr3B.!!$F2 6756
6 TraesCS3A01G446200 chr6A 501706652 501707229 577 False 575.000000 575 84.915000 6871 7448 1 chr6A.!!$F2 577
7 TraesCS3A01G446200 chr7A 308458304 308458828 524 True 545.000000 545 85.660000 6871 7392 1 chr7A.!!$R5 521
8 TraesCS3A01G446200 chr7A 314661430 314661948 518 False 529.000000 529 85.277000 6871 7385 1 chr7A.!!$F1 514
9 TraesCS3A01G446200 chr1A 165724186 165724702 516 False 508.000000 508 84.704000 6871 7383 1 chr1A.!!$F1 512

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
492 495 0.179059 TGCAGTCACGCCTTTCTTCA 60.179 50.000 0.00 0.0 0.00 3.02 F
1640 1704 0.031043 CCCGTTTTGGTCCGGTTTTC 59.969 55.000 0.00 0.0 42.67 2.29 F
3212 4413 0.322816 TGAAGCCCTGACATTCCTGC 60.323 55.000 0.00 0.0 0.00 4.85 F
3216 4417 0.179034 GCCCTGACATTCCTGCCTAG 60.179 60.000 0.00 0.0 0.00 3.02 F
4687 6889 0.037605 CTCCTGTAAAAGCCGGACGT 60.038 55.000 5.05 0.0 0.00 4.34 F
4799 7001 2.249337 TGCGCTTGCGAAATAAACATG 58.751 42.857 19.55 0.0 43.34 3.21 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1672 1736 0.309302 TTCGCAATTGGAACACACGG 59.691 50.0 7.72 0.0 39.29 4.94 R
3215 4416 0.036875 GTAAACCCAGTGGCAGAGCT 59.963 55.0 2.61 0.0 33.59 4.09 R
4314 6516 0.601558 AAGCTTGCTGCATTGTGAGG 59.398 50.0 1.84 0.0 45.94 3.86 R
4903 7105 1.028330 CATCGTTGTCCAGCCATGCT 61.028 55.0 0.00 0.0 40.77 3.79 R
5673 7958 0.309302 TCCATGGTGTTTTCGCAACG 59.691 50.0 12.58 0.0 0.00 4.10 R
6792 9161 0.250513 GGAAATGGCAGAGTCGGAGT 59.749 55.0 0.00 0.0 0.00 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
103 104 1.137872 GGTGGAATTTGCACACAACCA 59.862 47.619 20.58 1.48 40.73 3.67
171 174 1.154016 CACGTGTCGAGGCCACTAG 60.154 63.158 7.58 0.00 0.00 2.57
188 191 0.413832 TAGTTCCTCCCAGCTCCAGT 59.586 55.000 0.00 0.00 0.00 4.00
239 242 7.962918 GCACACTAGTTGGTGTTTTATTATCTG 59.037 37.037 13.23 0.00 46.71 2.90
254 257 7.534085 TTATTATCTGTAAAGCGGTGTGAAG 57.466 36.000 0.00 0.00 0.00 3.02
317 320 1.429930 TTGCACTCCTCCAACACCTA 58.570 50.000 0.00 0.00 0.00 3.08
358 361 1.001641 ACTGATGTGCCTCCCTTGC 60.002 57.895 0.00 0.00 0.00 4.01
380 383 1.484653 CATAGTCATTCGGTGGGGTCA 59.515 52.381 0.00 0.00 0.00 4.02
467 470 3.451556 ATGCTGCCCCTCGATCACG 62.452 63.158 0.00 0.00 41.26 4.35
490 493 0.463654 TGTGCAGTCACGCCTTTCTT 60.464 50.000 0.00 0.00 46.01 2.52
492 495 0.179059 TGCAGTCACGCCTTTCTTCA 60.179 50.000 0.00 0.00 0.00 3.02
514 517 1.145598 CATGTGGCAGAGCTCGGAT 59.854 57.895 18.66 0.00 0.00 4.18
547 550 6.880529 TCATGCTCATCAAAACTAACATCAGA 59.119 34.615 0.00 0.00 0.00 3.27
592 595 1.355381 TCAACCTACCTACGGGTGAGA 59.645 52.381 0.00 0.00 43.07 3.27
604 607 2.893398 GTGAGAGGCACGGGTAGG 59.107 66.667 0.00 0.00 37.83 3.18
605 608 1.982938 GTGAGAGGCACGGGTAGGT 60.983 63.158 0.00 0.00 37.83 3.08
606 609 1.681327 TGAGAGGCACGGGTAGGTC 60.681 63.158 0.00 0.00 0.00 3.85
649 652 1.204941 GGGTCTCACTTGTATGCGAGT 59.795 52.381 0.00 0.00 39.86 4.18
679 682 2.505819 GGAAGAGAGGGATTGGCTACAA 59.494 50.000 0.00 0.00 41.59 2.41
698 701 3.244249 ACAAGTCTAAGGGCAGAAGTGTC 60.244 47.826 0.00 0.00 0.00 3.67
752 758 1.234615 AAGAATGGACGGTGGCGTTG 61.235 55.000 0.00 0.00 0.00 4.10
767 773 2.223805 GGCGTTGGATTGGAATGGAATC 60.224 50.000 0.00 0.00 0.00 2.52
780 786 0.768622 TGGAATCAAGACCCGGTGTT 59.231 50.000 0.00 0.00 0.00 3.32
795 801 5.198207 CCCGGTGTTAAAATAGGGAAAGAT 58.802 41.667 0.00 0.00 41.26 2.40
888 899 2.941025 CCCCCTGCTCCCTCCAAA 60.941 66.667 0.00 0.00 0.00 3.28
889 900 2.319762 CCCCCTGCTCCCTCCAAAT 61.320 63.158 0.00 0.00 0.00 2.32
890 901 1.228510 CCCCTGCTCCCTCCAAATC 59.771 63.158 0.00 0.00 0.00 2.17
891 902 1.228510 CCCTGCTCCCTCCAAATCC 59.771 63.158 0.00 0.00 0.00 3.01
892 903 1.574526 CCCTGCTCCCTCCAAATCCA 61.575 60.000 0.00 0.00 0.00 3.41
893 904 0.332632 CCTGCTCCCTCCAAATCCAA 59.667 55.000 0.00 0.00 0.00 3.53
901 912 1.027357 CTCCAAATCCAATCAGCGGG 58.973 55.000 0.00 0.00 0.00 6.13
1057 1076 0.535102 AGCAACCACAGCCACACTAC 60.535 55.000 0.00 0.00 0.00 2.73
1141 1160 3.474570 CCCTGCTTCCCCTCCTCG 61.475 72.222 0.00 0.00 0.00 4.63
1142 1161 4.168291 CCTGCTTCCCCTCCTCGC 62.168 72.222 0.00 0.00 0.00 5.03
1143 1162 3.393970 CTGCTTCCCCTCCTCGCA 61.394 66.667 0.00 0.00 0.00 5.10
1144 1163 3.672295 CTGCTTCCCCTCCTCGCAC 62.672 68.421 0.00 0.00 0.00 5.34
1147 1166 3.068691 TTCCCCTCCTCGCACTCG 61.069 66.667 0.00 0.00 0.00 4.18
1150 1169 2.752238 CCCTCCTCGCACTCGTCT 60.752 66.667 0.00 0.00 36.96 4.18
1151 1170 2.344203 CCCTCCTCGCACTCGTCTT 61.344 63.158 0.00 0.00 36.96 3.01
1155 1174 1.153939 CCTCGCACTCGTCTTCCTG 60.154 63.158 0.00 0.00 36.96 3.86
1423 1487 1.824329 GATCCCTCCTCGTGCTCGA 60.824 63.158 10.80 10.80 44.12 4.04
1543 1607 2.293399 GTGTCTGATTCGCTGGGTTTTT 59.707 45.455 0.00 0.00 0.00 1.94
1615 1679 0.866061 CGGAATCTGCCTCACGTACG 60.866 60.000 15.01 15.01 0.00 3.67
1629 1693 1.280444 GTACGCACCACCCGTTTTG 59.720 57.895 0.00 0.00 39.88 2.44
1638 1702 1.076850 ACCCGTTTTGGTCCGGTTT 60.077 52.632 0.00 0.00 42.67 3.27
1639 1703 0.683828 ACCCGTTTTGGTCCGGTTTT 60.684 50.000 0.00 0.00 42.67 2.43
1640 1704 0.031043 CCCGTTTTGGTCCGGTTTTC 59.969 55.000 0.00 0.00 42.67 2.29
1643 1707 2.542205 CCGTTTTGGTCCGGTTTTCTTC 60.542 50.000 0.00 0.00 39.38 2.87
1647 1711 2.265589 TGGTCCGGTTTTCTTCTTCC 57.734 50.000 0.00 0.00 0.00 3.46
1692 1756 1.268794 CCGTGTGTTCCAATTGCGAAA 60.269 47.619 0.00 0.00 0.00 3.46
1985 2266 8.723942 ATTAATAAATAGGCTATCGCTTCTGG 57.276 34.615 7.63 0.00 36.09 3.86
2027 2308 6.879993 TCGCCCTTAAAGTTGTCACATATTAA 59.120 34.615 0.00 0.00 0.00 1.40
2036 2317 7.254227 AGTTGTCACATATTAAACACAACGT 57.746 32.000 7.01 0.00 45.33 3.99
2082 2364 1.688197 TCGTTTTCCCTAGGTCGTTGT 59.312 47.619 8.29 0.00 0.00 3.32
2113 2395 3.211045 TGCCTTATAAACAAGCGATCCC 58.789 45.455 0.00 0.00 0.00 3.85
2114 2396 2.552743 GCCTTATAAACAAGCGATCCCC 59.447 50.000 0.00 0.00 0.00 4.81
2122 2404 3.864789 ACAAGCGATCCCCTAATGAAT 57.135 42.857 0.00 0.00 0.00 2.57
2138 2420 9.698309 CCCTAATGAATAGTTGATGTGTAGTAG 57.302 37.037 0.00 0.00 0.00 2.57
2139 2421 9.197694 CCTAATGAATAGTTGATGTGTAGTAGC 57.802 37.037 0.00 0.00 0.00 3.58
2178 2460 6.500751 TCCTCCTAACACTCCAACTTTTCTAT 59.499 38.462 0.00 0.00 0.00 1.98
2435 2741 7.744715 CCTAACTTGAAATCGAACATGTTACAC 59.255 37.037 11.95 0.00 36.39 2.90
2572 3595 2.287009 GCCCTTATGCACAAGTTATCGC 60.287 50.000 3.66 0.00 0.00 4.58
2613 3638 8.729805 ACTTCTCTATTTTCATCCTAAAGCAG 57.270 34.615 0.00 0.00 0.00 4.24
2625 3650 7.582719 TCATCCTAAAGCAGTATTTATTGGGT 58.417 34.615 0.00 0.00 0.00 4.51
2681 3812 5.550290 AGAGATAGCGGTAACTAGGTAGAC 58.450 45.833 4.26 0.00 0.00 2.59
2734 3868 6.808829 TCTTGAGCACATTTCAAAAATCACT 58.191 32.000 0.00 0.00 34.41 3.41
2804 3938 5.285651 CCCAGCGTTGTGAAAGATTTTAAA 58.714 37.500 0.00 0.00 0.00 1.52
2905 4039 5.954150 CTAGTCACTAGTTAAAGGGTACCCA 59.046 44.000 32.70 9.81 38.11 4.51
2922 4056 5.717654 GGTACCCATTGGAAAGGTTATTTCA 59.282 40.000 3.62 0.00 35.02 2.69
2947 4081 4.678256 ACTCCTCTGGTAGAGAATCAACA 58.322 43.478 7.39 0.00 45.07 3.33
2956 4090 1.620819 AGAGAATCAACAGTCGTGGCT 59.379 47.619 0.00 0.00 37.82 4.75
3013 4213 7.126061 TGGTCAGATAGATACCTTCAGAGAAA 58.874 38.462 0.00 0.00 34.23 2.52
3036 4236 0.551131 AGGAAGCTTGGGTCCTGGAT 60.551 55.000 2.10 0.00 42.87 3.41
3082 4283 5.838531 AGAATAAAGGTCTGACTCGTAGG 57.161 43.478 7.85 0.00 0.00 3.18
3165 4366 6.257630 GTCTGATAGCAAGATCCTTTTCTGAC 59.742 42.308 0.00 0.00 0.00 3.51
3166 4367 6.053632 TGATAGCAAGATCCTTTTCTGACA 57.946 37.500 0.00 0.00 0.00 3.58
3167 4368 6.656902 TGATAGCAAGATCCTTTTCTGACAT 58.343 36.000 0.00 0.00 0.00 3.06
3168 4369 6.765036 TGATAGCAAGATCCTTTTCTGACATC 59.235 38.462 0.00 0.00 0.00 3.06
3169 4370 4.914983 AGCAAGATCCTTTTCTGACATCA 58.085 39.130 0.00 0.00 0.00 3.07
3170 4371 5.319453 AGCAAGATCCTTTTCTGACATCAA 58.681 37.500 0.00 0.00 0.00 2.57
3171 4372 5.950549 AGCAAGATCCTTTTCTGACATCAAT 59.049 36.000 0.00 0.00 0.00 2.57
3172 4373 6.095160 AGCAAGATCCTTTTCTGACATCAATC 59.905 38.462 0.00 0.00 0.00 2.67
3173 4374 6.095160 GCAAGATCCTTTTCTGACATCAATCT 59.905 38.462 0.00 0.00 0.00 2.40
3174 4375 7.362747 GCAAGATCCTTTTCTGACATCAATCTT 60.363 37.037 0.00 0.00 32.67 2.40
3176 4377 8.053026 AGATCCTTTTCTGACATCAATCTTTG 57.947 34.615 0.00 0.00 0.00 2.77
3178 4379 7.206981 TCCTTTTCTGACATCAATCTTTGTC 57.793 36.000 0.00 0.00 42.05 3.18
3180 4381 6.208204 CCTTTTCTGACATCAATCTTTGTCCT 59.792 38.462 0.00 0.00 41.22 3.85
3181 4382 6.808008 TTTCTGACATCAATCTTTGTCCTC 57.192 37.500 0.00 0.00 41.22 3.71
3182 4383 5.752036 TCTGACATCAATCTTTGTCCTCT 57.248 39.130 0.00 0.00 41.22 3.69
3183 4384 6.119240 TCTGACATCAATCTTTGTCCTCTT 57.881 37.500 0.00 0.00 41.22 2.85
3184 4385 7.244886 TCTGACATCAATCTTTGTCCTCTTA 57.755 36.000 0.00 0.00 41.22 2.10
3185 4386 7.326454 TCTGACATCAATCTTTGTCCTCTTAG 58.674 38.462 0.00 0.00 41.22 2.18
3186 4387 7.009179 TGACATCAATCTTTGTCCTCTTAGT 57.991 36.000 0.00 0.00 41.22 2.24
3187 4388 7.453393 TGACATCAATCTTTGTCCTCTTAGTT 58.547 34.615 0.00 0.00 41.22 2.24
3188 4389 7.388776 TGACATCAATCTTTGTCCTCTTAGTTG 59.611 37.037 0.00 0.00 41.22 3.16
3189 4390 7.227156 ACATCAATCTTTGTCCTCTTAGTTGT 58.773 34.615 0.00 0.00 0.00 3.32
3190 4391 7.721399 ACATCAATCTTTGTCCTCTTAGTTGTT 59.279 33.333 0.00 0.00 0.00 2.83
3191 4392 7.730364 TCAATCTTTGTCCTCTTAGTTGTTC 57.270 36.000 0.00 0.00 0.00 3.18
3192 4393 7.279615 TCAATCTTTGTCCTCTTAGTTGTTCA 58.720 34.615 0.00 0.00 0.00 3.18
3193 4394 7.939039 TCAATCTTTGTCCTCTTAGTTGTTCAT 59.061 33.333 0.00 0.00 0.00 2.57
3194 4395 7.678947 ATCTTTGTCCTCTTAGTTGTTCATG 57.321 36.000 0.00 0.00 0.00 3.07
3195 4396 6.826668 TCTTTGTCCTCTTAGTTGTTCATGA 58.173 36.000 0.00 0.00 0.00 3.07
3196 4397 7.279615 TCTTTGTCCTCTTAGTTGTTCATGAA 58.720 34.615 3.38 3.38 0.00 2.57
3197 4398 7.442364 TCTTTGTCCTCTTAGTTGTTCATGAAG 59.558 37.037 8.80 0.00 0.00 3.02
3198 4399 4.997395 TGTCCTCTTAGTTGTTCATGAAGC 59.003 41.667 8.80 4.81 0.00 3.86
3199 4400 4.393371 GTCCTCTTAGTTGTTCATGAAGCC 59.607 45.833 8.80 0.00 0.00 4.35
3200 4401 3.691609 CCTCTTAGTTGTTCATGAAGCCC 59.308 47.826 8.80 0.00 0.00 5.19
3201 4402 4.566488 CCTCTTAGTTGTTCATGAAGCCCT 60.566 45.833 8.80 7.11 0.00 5.19
3202 4403 4.326826 TCTTAGTTGTTCATGAAGCCCTG 58.673 43.478 8.80 0.00 0.00 4.45
3203 4404 2.957402 AGTTGTTCATGAAGCCCTGA 57.043 45.000 8.80 0.00 0.00 3.86
3204 4405 2.508526 AGTTGTTCATGAAGCCCTGAC 58.491 47.619 8.80 0.00 0.00 3.51
3205 4406 2.158623 AGTTGTTCATGAAGCCCTGACA 60.159 45.455 8.80 0.00 0.00 3.58
3206 4407 2.821969 GTTGTTCATGAAGCCCTGACAT 59.178 45.455 8.80 0.00 0.00 3.06
3207 4408 3.159213 TGTTCATGAAGCCCTGACATT 57.841 42.857 8.80 0.00 0.00 2.71
3208 4409 3.084039 TGTTCATGAAGCCCTGACATTC 58.916 45.455 8.80 0.00 0.00 2.67
3209 4410 2.424956 GTTCATGAAGCCCTGACATTCC 59.575 50.000 8.80 0.00 0.00 3.01
3210 4411 1.918262 TCATGAAGCCCTGACATTCCT 59.082 47.619 0.00 0.00 0.00 3.36
3211 4412 2.022195 CATGAAGCCCTGACATTCCTG 58.978 52.381 0.00 0.00 0.00 3.86
3212 4413 0.322816 TGAAGCCCTGACATTCCTGC 60.323 55.000 0.00 0.00 0.00 4.85
3213 4414 1.000396 AAGCCCTGACATTCCTGCC 60.000 57.895 0.00 0.00 0.00 4.85
3214 4415 1.504275 AAGCCCTGACATTCCTGCCT 61.504 55.000 0.00 0.00 0.00 4.75
3215 4416 0.621571 AGCCCTGACATTCCTGCCTA 60.622 55.000 0.00 0.00 0.00 3.93
3216 4417 0.179034 GCCCTGACATTCCTGCCTAG 60.179 60.000 0.00 0.00 0.00 3.02
3217 4418 0.179034 CCCTGACATTCCTGCCTAGC 60.179 60.000 0.00 0.00 0.00 3.42
3218 4419 0.835941 CCTGACATTCCTGCCTAGCT 59.164 55.000 0.00 0.00 0.00 3.32
3219 4420 1.202627 CCTGACATTCCTGCCTAGCTC 60.203 57.143 0.00 0.00 0.00 4.09
3220 4421 1.761784 CTGACATTCCTGCCTAGCTCT 59.238 52.381 0.00 0.00 0.00 4.09
3221 4422 1.483827 TGACATTCCTGCCTAGCTCTG 59.516 52.381 0.00 0.00 0.00 3.35
3222 4423 0.179936 ACATTCCTGCCTAGCTCTGC 59.820 55.000 0.00 0.00 0.00 4.26
3223 4424 0.534652 CATTCCTGCCTAGCTCTGCC 60.535 60.000 0.00 0.00 0.00 4.85
3224 4425 0.984961 ATTCCTGCCTAGCTCTGCCA 60.985 55.000 0.00 0.00 0.00 4.92
3225 4426 1.903877 TTCCTGCCTAGCTCTGCCAC 61.904 60.000 0.00 0.00 0.00 5.01
3226 4427 2.365586 CCTGCCTAGCTCTGCCACT 61.366 63.158 0.00 0.00 0.00 4.00
3227 4428 1.153409 CTGCCTAGCTCTGCCACTG 60.153 63.158 0.00 0.00 0.00 3.66
3245 4446 5.746952 GCCACTGGGTTTACCTTTAAGTAGT 60.747 44.000 0.00 0.00 41.11 2.73
3291 4492 7.694388 TTCTTCACTACGTTGCACATATATC 57.306 36.000 0.00 0.00 0.00 1.63
3421 5606 2.749076 CCATTCAACTTCGAATCAGGCA 59.251 45.455 0.00 0.00 33.27 4.75
3670 5855 3.982829 GGAGACCTCAAAACCGCC 58.017 61.111 0.00 0.00 0.00 6.13
3673 5858 2.668550 GACCTCAAAACCGCCGCT 60.669 61.111 0.00 0.00 0.00 5.52
3711 5896 4.572389 CCTTCTGAAGGTATGCATGTGTAC 59.428 45.833 25.13 0.00 43.95 2.90
3716 5901 5.359756 TGAAGGTATGCATGTGTACTCATC 58.640 41.667 10.16 4.45 0.00 2.92
3721 5906 6.325028 AGGTATGCATGTGTACTCATCTTAGT 59.675 38.462 10.16 0.00 0.00 2.24
3727 5912 7.286775 TGCATGTGTACTCATCTTAGTATGGTA 59.713 37.037 7.44 0.00 34.59 3.25
3903 6089 2.994643 AAAGGTCTGGCCCCGGTTTG 62.995 60.000 0.00 0.00 38.26 2.93
4021 6213 7.390718 AGCCAACTATAAACTTCAAGGTTAGTG 59.609 37.037 0.52 0.00 29.83 2.74
4022 6214 7.174426 GCCAACTATAAACTTCAAGGTTAGTGT 59.826 37.037 0.52 0.00 29.83 3.55
4023 6215 9.715121 CCAACTATAAACTTCAAGGTTAGTGTA 57.285 33.333 0.52 0.00 29.83 2.90
4088 6280 7.531857 TGAAATGCCAAGTAAATCAGGTTTA 57.468 32.000 0.00 0.00 0.00 2.01
4273 6473 8.759641 CGAATCAGATTAGTTTTCAGTATCCTG 58.240 37.037 0.00 0.00 40.25 3.86
4307 6507 9.913451 TTGCTTCAAAACATTTCTTTTAAATCG 57.087 25.926 0.00 0.00 0.00 3.34
4314 6516 8.466086 AAACATTTCTTTTAAATCGCCATCTC 57.534 30.769 0.00 0.00 0.00 2.75
4347 6549 0.505655 AAGCTTTTACGACGTGCGAC 59.494 50.000 11.56 0.00 44.57 5.19
4418 6620 4.635961 AAATCGACTCGGTAAAAACGAC 57.364 40.909 0.00 0.00 36.25 4.34
4419 6621 2.772568 TCGACTCGGTAAAAACGACA 57.227 45.000 0.00 0.00 36.25 4.35
4461 6663 3.249986 ACTGCAAGCTCTTCTCTCATC 57.750 47.619 0.00 0.00 37.60 2.92
4481 6683 7.555195 TCTCATCATGATGCACTGACTATTTTT 59.445 33.333 27.68 0.00 38.65 1.94
4609 6811 8.015658 CCTAAAAGTTTCAAAGATCTTGGTACG 58.984 37.037 9.17 0.00 0.00 3.67
4687 6889 0.037605 CTCCTGTAAAAGCCGGACGT 60.038 55.000 5.05 0.00 0.00 4.34
4791 6993 6.453643 TTTAAAATTATTGCGCTTGCGAAA 57.546 29.167 19.55 15.28 43.34 3.46
4799 7001 2.249337 TGCGCTTGCGAAATAAACATG 58.751 42.857 19.55 0.00 43.34 3.21
5009 7211 6.468543 AGACACTCCCATTTTTCTAACTCTC 58.531 40.000 0.00 0.00 0.00 3.20
5323 7525 9.228949 GATTCATTTGCATTATCCTAGACAGAT 57.771 33.333 0.00 0.00 0.00 2.90
5673 7958 5.050295 GGCACGGTTCAAGCTAAGAATATAC 60.050 44.000 5.00 0.00 0.00 1.47
5861 8147 6.798315 ATGTATGAGCACATCATTAGCTTC 57.202 37.500 0.00 0.00 46.97 3.86
5893 8179 2.427232 TCCGTACCTTCTCGTTTGTG 57.573 50.000 0.00 0.00 0.00 3.33
6073 8359 9.909644 AAATGTTGATTTGAAGAAAGAGATGAG 57.090 29.630 0.00 0.00 30.17 2.90
6074 8360 6.906659 TGTTGATTTGAAGAAAGAGATGAGC 58.093 36.000 0.00 0.00 0.00 4.26
6075 8361 6.713903 TGTTGATTTGAAGAAAGAGATGAGCT 59.286 34.615 0.00 0.00 0.00 4.09
6078 8364 7.389232 TGATTTGAAGAAAGAGATGAGCTACA 58.611 34.615 0.00 0.00 0.00 2.74
6094 8380 7.724490 TGAGCTACATGCCATATAGATAGTT 57.276 36.000 0.00 0.00 44.23 2.24
6151 8437 4.694982 ACTGCGTGTTGTATTCATTCATGA 59.305 37.500 0.00 0.00 34.44 3.07
6189 8475 5.793952 CGATGCAGCTTTGATATTATTGCTC 59.206 40.000 0.00 0.00 0.00 4.26
6206 8492 3.340928 TGCTCTCATGATTTGTCCACTG 58.659 45.455 0.00 0.00 0.00 3.66
6209 8495 4.321718 CTCTCATGATTTGTCCACTGTGT 58.678 43.478 7.08 0.00 0.00 3.72
6338 8661 6.906157 ATTCATACTTGGGGCATTTCATAG 57.094 37.500 0.00 0.00 0.00 2.23
6350 8715 7.955185 TGGGGCATTTCATAGTAATATGGAAAT 59.045 33.333 7.93 10.10 29.54 2.17
6366 8731 8.954834 ATATGGAAATTGGGATTATGTGCTAA 57.045 30.769 0.00 0.00 0.00 3.09
6367 8732 6.713762 TGGAAATTGGGATTATGTGCTAAG 57.286 37.500 0.00 0.00 0.00 2.18
6369 8734 7.068702 TGGAAATTGGGATTATGTGCTAAGAT 58.931 34.615 0.00 0.00 0.00 2.40
6371 8736 8.515414 GGAAATTGGGATTATGTGCTAAGATAC 58.485 37.037 0.00 0.00 0.00 2.24
6372 8737 7.672983 AATTGGGATTATGTGCTAAGATACG 57.327 36.000 0.00 0.00 0.00 3.06
6424 8791 4.406003 AGGTAAGTTAGGCCATGTGACTAG 59.594 45.833 5.01 0.00 0.00 2.57
6441 8809 8.067751 TGTGACTAGTGAGCATTCTAATTAGT 57.932 34.615 12.19 0.00 0.00 2.24
6501 8869 2.445525 AGATAAGTGGTGGTGGTGGTTT 59.554 45.455 0.00 0.00 0.00 3.27
6502 8870 2.060050 TAAGTGGTGGTGGTGGTTTG 57.940 50.000 0.00 0.00 0.00 2.93
6574 8942 4.948621 ACCTACACGCCATATAGATAGTCC 59.051 45.833 0.00 0.00 0.00 3.85
6645 9013 5.596836 TCTTTCTTGCAAATGTTTGGTCT 57.403 34.783 0.00 0.00 38.57 3.85
6657 9025 3.485394 TGTTTGGTCTATGCAGCTTTGA 58.515 40.909 0.00 0.00 0.00 2.69
6668 9036 3.114809 TGCAGCTTTGACATTGTTTTCG 58.885 40.909 0.00 0.00 0.00 3.46
6682 9050 3.497118 TGTTTTCGTGCTTTGTTCACTG 58.503 40.909 0.00 0.00 32.54 3.66
6703 9071 0.521291 TGATGCGTTTTGTAGCCTGC 59.479 50.000 0.00 0.00 0.00 4.85
6707 9075 1.791103 GCGTTTTGTAGCCTGCACCA 61.791 55.000 0.00 0.00 0.00 4.17
6712 9080 4.126437 GTTTTGTAGCCTGCACCATTTTT 58.874 39.130 0.00 0.00 0.00 1.94
6714 9082 1.539388 TGTAGCCTGCACCATTTTTCG 59.461 47.619 0.00 0.00 0.00 3.46
6715 9083 1.135402 GTAGCCTGCACCATTTTTCGG 60.135 52.381 0.00 0.00 0.00 4.30
6719 9087 1.532794 TGCACCATTTTTCGGCCCT 60.533 52.632 0.00 0.00 0.00 5.19
6725 9093 1.431496 CATTTTTCGGCCCTTTGCAG 58.569 50.000 0.00 0.00 43.89 4.41
6737 9105 2.233271 CCTTTGCAGGTGTGACTCAAT 58.767 47.619 0.00 0.00 35.06 2.57
6744 9113 1.985159 AGGTGTGACTCAATTGGCCTA 59.015 47.619 3.32 0.00 0.00 3.93
6746 9115 1.740025 GTGTGACTCAATTGGCCTAGC 59.260 52.381 3.32 0.00 0.00 3.42
6757 9126 1.500474 TGGCCTAGCTGAGCTAATGT 58.500 50.000 15.85 0.00 40.82 2.71
6758 9127 1.839994 TGGCCTAGCTGAGCTAATGTT 59.160 47.619 15.85 0.00 40.82 2.71
6759 9128 2.216898 GGCCTAGCTGAGCTAATGTTG 58.783 52.381 15.85 3.22 40.82 3.33
6760 9129 2.420687 GGCCTAGCTGAGCTAATGTTGT 60.421 50.000 15.85 0.00 40.82 3.32
6761 9130 3.181465 GGCCTAGCTGAGCTAATGTTGTA 60.181 47.826 15.85 0.00 40.82 2.41
6762 9131 4.442706 GCCTAGCTGAGCTAATGTTGTAA 58.557 43.478 15.85 0.00 40.82 2.41
6763 9132 4.271291 GCCTAGCTGAGCTAATGTTGTAAC 59.729 45.833 15.85 0.00 40.82 2.50
6764 9133 5.419542 CCTAGCTGAGCTAATGTTGTAACA 58.580 41.667 15.85 0.00 40.82 2.41
6765 9134 5.292101 CCTAGCTGAGCTAATGTTGTAACAC 59.708 44.000 15.85 0.00 40.82 3.32
6766 9135 4.003648 AGCTGAGCTAATGTTGTAACACC 58.996 43.478 4.49 0.00 38.40 4.16
6767 9136 3.127030 GCTGAGCTAATGTTGTAACACCC 59.873 47.826 0.00 0.00 42.51 4.61
6768 9137 3.681593 TGAGCTAATGTTGTAACACCCC 58.318 45.455 0.00 0.00 42.51 4.95
6769 9138 2.676342 GAGCTAATGTTGTAACACCCCG 59.324 50.000 0.00 0.00 42.51 5.73
6770 9139 1.741145 GCTAATGTTGTAACACCCCGG 59.259 52.381 0.00 0.00 42.51 5.73
6771 9140 2.616001 GCTAATGTTGTAACACCCCGGA 60.616 50.000 0.73 0.00 42.51 5.14
6772 9141 2.891191 AATGTTGTAACACCCCGGAT 57.109 45.000 0.73 0.00 42.51 4.18
6773 9142 2.122783 ATGTTGTAACACCCCGGATG 57.877 50.000 0.73 2.98 42.51 3.51
6774 9143 0.766131 TGTTGTAACACCCCGGATGT 59.234 50.000 0.73 3.79 33.17 3.06
6775 9144 1.976404 TGTTGTAACACCCCGGATGTA 59.024 47.619 0.73 0.00 33.17 2.29
6776 9145 2.371179 TGTTGTAACACCCCGGATGTAA 59.629 45.455 0.73 0.00 33.17 2.41
6777 9146 3.009253 TGTTGTAACACCCCGGATGTAAT 59.991 43.478 0.73 0.00 33.17 1.89
6778 9147 4.011698 GTTGTAACACCCCGGATGTAATT 58.988 43.478 0.73 0.66 0.00 1.40
6779 9148 4.304048 TGTAACACCCCGGATGTAATTT 57.696 40.909 0.73 0.00 0.00 1.82
6780 9149 4.664392 TGTAACACCCCGGATGTAATTTT 58.336 39.130 0.73 0.00 0.00 1.82
6781 9150 4.701171 TGTAACACCCCGGATGTAATTTTC 59.299 41.667 0.73 0.00 0.00 2.29
6782 9151 2.730382 ACACCCCGGATGTAATTTTCC 58.270 47.619 0.73 0.00 0.00 3.13
6783 9152 2.041891 ACACCCCGGATGTAATTTTCCA 59.958 45.455 0.73 0.00 31.99 3.53
6784 9153 3.295973 CACCCCGGATGTAATTTTCCAT 58.704 45.455 0.73 0.00 31.99 3.41
6785 9154 4.079672 ACACCCCGGATGTAATTTTCCATA 60.080 41.667 0.73 0.00 31.99 2.74
6786 9155 4.890581 CACCCCGGATGTAATTTTCCATAA 59.109 41.667 0.73 0.00 31.99 1.90
6787 9156 5.538433 CACCCCGGATGTAATTTTCCATAAT 59.462 40.000 0.73 0.00 31.99 1.28
6788 9157 6.041523 CACCCCGGATGTAATTTTCCATAATT 59.958 38.462 0.73 0.00 31.99 1.40
6789 9158 6.041523 ACCCCGGATGTAATTTTCCATAATTG 59.958 38.462 0.73 0.00 31.99 2.32
6790 9159 6.041523 CCCCGGATGTAATTTTCCATAATTGT 59.958 38.462 0.73 0.00 31.99 2.71
6791 9160 7.231722 CCCCGGATGTAATTTTCCATAATTGTA 59.768 37.037 0.73 0.00 31.99 2.41
6792 9161 8.634444 CCCGGATGTAATTTTCCATAATTGTAA 58.366 33.333 0.73 0.00 31.99 2.41
6793 9162 9.458374 CCGGATGTAATTTTCCATAATTGTAAC 57.542 33.333 0.00 0.00 31.99 2.50
6798 9167 9.451002 TGTAATTTTCCATAATTGTAACTCCGA 57.549 29.630 0.00 0.00 0.00 4.55
6799 9168 9.712359 GTAATTTTCCATAATTGTAACTCCGAC 57.288 33.333 0.00 0.00 0.00 4.79
6800 9169 8.575649 AATTTTCCATAATTGTAACTCCGACT 57.424 30.769 0.00 0.00 0.00 4.18
6801 9170 7.605410 TTTTCCATAATTGTAACTCCGACTC 57.395 36.000 0.00 0.00 0.00 3.36
6802 9171 6.540438 TTCCATAATTGTAACTCCGACTCT 57.460 37.500 0.00 0.00 0.00 3.24
6803 9172 5.902681 TCCATAATTGTAACTCCGACTCTG 58.097 41.667 0.00 0.00 0.00 3.35
6804 9173 4.508124 CCATAATTGTAACTCCGACTCTGC 59.492 45.833 0.00 0.00 0.00 4.26
6805 9174 2.674796 ATTGTAACTCCGACTCTGCC 57.325 50.000 0.00 0.00 0.00 4.85
6806 9175 1.334160 TTGTAACTCCGACTCTGCCA 58.666 50.000 0.00 0.00 0.00 4.92
6807 9176 1.557099 TGTAACTCCGACTCTGCCAT 58.443 50.000 0.00 0.00 0.00 4.40
6808 9177 1.899814 TGTAACTCCGACTCTGCCATT 59.100 47.619 0.00 0.00 0.00 3.16
6809 9178 2.301870 TGTAACTCCGACTCTGCCATTT 59.698 45.455 0.00 0.00 0.00 2.32
6810 9179 2.100605 AACTCCGACTCTGCCATTTC 57.899 50.000 0.00 0.00 0.00 2.17
6811 9180 0.250513 ACTCCGACTCTGCCATTTCC 59.749 55.000 0.00 0.00 0.00 3.13
6812 9181 0.807667 CTCCGACTCTGCCATTTCCG 60.808 60.000 0.00 0.00 0.00 4.30
6813 9182 1.815421 CCGACTCTGCCATTTCCGG 60.815 63.158 0.00 0.00 0.00 5.14
6826 9195 5.828299 CCATTTCCGGCTTTAAGTTATGA 57.172 39.130 0.00 0.00 0.00 2.15
6827 9196 5.821204 CCATTTCCGGCTTTAAGTTATGAG 58.179 41.667 0.00 0.00 0.00 2.90
6828 9197 5.588648 CCATTTCCGGCTTTAAGTTATGAGA 59.411 40.000 0.00 0.00 0.00 3.27
6829 9198 6.263168 CCATTTCCGGCTTTAAGTTATGAGAT 59.737 38.462 0.00 0.00 0.00 2.75
6830 9199 7.201821 CCATTTCCGGCTTTAAGTTATGAGATT 60.202 37.037 0.00 0.00 0.00 2.40
6831 9200 6.920569 TTCCGGCTTTAAGTTATGAGATTC 57.079 37.500 0.00 0.00 0.00 2.52
6832 9201 5.047847 TCCGGCTTTAAGTTATGAGATTCG 58.952 41.667 0.00 0.00 0.00 3.34
6833 9202 4.809426 CCGGCTTTAAGTTATGAGATTCGT 59.191 41.667 0.00 0.00 0.00 3.85
6834 9203 5.276868 CCGGCTTTAAGTTATGAGATTCGTG 60.277 44.000 0.00 0.00 0.00 4.35
6835 9204 5.276868 CGGCTTTAAGTTATGAGATTCGTGG 60.277 44.000 0.00 0.00 0.00 4.94
6836 9205 5.585047 GGCTTTAAGTTATGAGATTCGTGGT 59.415 40.000 0.00 0.00 0.00 4.16
6837 9206 6.093633 GGCTTTAAGTTATGAGATTCGTGGTT 59.906 38.462 0.00 0.00 0.00 3.67
6838 9207 6.961554 GCTTTAAGTTATGAGATTCGTGGTTG 59.038 38.462 0.00 0.00 0.00 3.77
6839 9208 6.978343 TTAAGTTATGAGATTCGTGGTTGG 57.022 37.500 0.00 0.00 0.00 3.77
6840 9209 3.873910 AGTTATGAGATTCGTGGTTGGG 58.126 45.455 0.00 0.00 0.00 4.12
6841 9210 3.263425 AGTTATGAGATTCGTGGTTGGGT 59.737 43.478 0.00 0.00 0.00 4.51
6842 9211 2.879103 ATGAGATTCGTGGTTGGGTT 57.121 45.000 0.00 0.00 0.00 4.11
6843 9212 2.649531 TGAGATTCGTGGTTGGGTTT 57.350 45.000 0.00 0.00 0.00 3.27
6844 9213 2.226330 TGAGATTCGTGGTTGGGTTTG 58.774 47.619 0.00 0.00 0.00 2.93
6845 9214 2.227194 GAGATTCGTGGTTGGGTTTGT 58.773 47.619 0.00 0.00 0.00 2.83
6846 9215 1.953686 AGATTCGTGGTTGGGTTTGTG 59.046 47.619 0.00 0.00 0.00 3.33
6847 9216 1.679153 GATTCGTGGTTGGGTTTGTGT 59.321 47.619 0.00 0.00 0.00 3.72
6848 9217 1.096416 TTCGTGGTTGGGTTTGTGTC 58.904 50.000 0.00 0.00 0.00 3.67
6849 9218 0.253610 TCGTGGTTGGGTTTGTGTCT 59.746 50.000 0.00 0.00 0.00 3.41
6850 9219 1.099689 CGTGGTTGGGTTTGTGTCTT 58.900 50.000 0.00 0.00 0.00 3.01
6851 9220 1.064952 CGTGGTTGGGTTTGTGTCTTC 59.935 52.381 0.00 0.00 0.00 2.87
6852 9221 1.064952 GTGGTTGGGTTTGTGTCTTCG 59.935 52.381 0.00 0.00 0.00 3.79
6853 9222 1.340211 TGGTTGGGTTTGTGTCTTCGT 60.340 47.619 0.00 0.00 0.00 3.85
6854 9223 1.746787 GGTTGGGTTTGTGTCTTCGTT 59.253 47.619 0.00 0.00 0.00 3.85
6855 9224 2.164827 GGTTGGGTTTGTGTCTTCGTTT 59.835 45.455 0.00 0.00 0.00 3.60
6856 9225 3.367600 GGTTGGGTTTGTGTCTTCGTTTT 60.368 43.478 0.00 0.00 0.00 2.43
6857 9226 3.495670 TGGGTTTGTGTCTTCGTTTTG 57.504 42.857 0.00 0.00 0.00 2.44
6858 9227 2.190161 GGGTTTGTGTCTTCGTTTTGC 58.810 47.619 0.00 0.00 0.00 3.68
6859 9228 2.416162 GGGTTTGTGTCTTCGTTTTGCA 60.416 45.455 0.00 0.00 0.00 4.08
6860 9229 3.443976 GGTTTGTGTCTTCGTTTTGCAT 58.556 40.909 0.00 0.00 0.00 3.96
6861 9230 3.862845 GGTTTGTGTCTTCGTTTTGCATT 59.137 39.130 0.00 0.00 0.00 3.56
6862 9231 4.328712 GGTTTGTGTCTTCGTTTTGCATTT 59.671 37.500 0.00 0.00 0.00 2.32
6863 9232 5.163903 GGTTTGTGTCTTCGTTTTGCATTTT 60.164 36.000 0.00 0.00 0.00 1.82
6864 9233 5.447478 TTGTGTCTTCGTTTTGCATTTTG 57.553 34.783 0.00 0.00 0.00 2.44
6865 9234 3.305629 TGTGTCTTCGTTTTGCATTTTGC 59.694 39.130 0.00 0.00 45.29 3.68
6866 9235 3.551485 GTGTCTTCGTTTTGCATTTTGCT 59.449 39.130 0.75 0.00 45.31 3.91
6867 9236 3.796178 TGTCTTCGTTTTGCATTTTGCTC 59.204 39.130 0.75 0.00 45.31 4.26
6868 9237 3.796178 GTCTTCGTTTTGCATTTTGCTCA 59.204 39.130 0.75 0.00 45.31 4.26
6869 9238 4.445385 GTCTTCGTTTTGCATTTTGCTCAT 59.555 37.500 0.75 0.00 45.31 2.90
6922 9292 3.704566 GGTGTCCCCTTTTGTCTCTTTTT 59.295 43.478 0.00 0.00 0.00 1.94
6928 9298 4.202151 CCCCTTTTGTCTCTTTTTGTGAGG 60.202 45.833 0.00 0.00 32.78 3.86
7040 9411 2.559668 AGTCCGTTTGATACTCCAACGA 59.440 45.455 13.16 0.42 0.00 3.85
7050 9421 1.269012 ACTCCAACGATTAACCGGGA 58.731 50.000 6.32 0.00 0.00 5.14
7142 9513 2.126071 CATGTCTTCCGCCGTCGT 60.126 61.111 0.00 0.00 0.00 4.34
7174 9545 2.288030 CGTGGTCGAAAACTACACCTCT 60.288 50.000 0.00 0.00 39.21 3.69
7253 9629 4.673968 GGTCCAAAACCCTAAAATCCTCT 58.326 43.478 0.00 0.00 42.85 3.69
7261 9637 1.490910 CCTAAAATCCTCTCCCGCCTT 59.509 52.381 0.00 0.00 0.00 4.35
7275 9651 4.052229 CCTTCGCCGGACACGTCT 62.052 66.667 5.05 0.00 38.78 4.18
7345 9724 2.751436 CATGGGCAGTTCCACCGG 60.751 66.667 0.00 0.00 39.97 5.28
7434 9814 3.974757 GTCCCCGTCGCCCGATAG 61.975 72.222 0.00 0.00 39.56 2.08
7437 9817 4.344474 CCCGTCGCCCGATAGCTC 62.344 72.222 0.00 0.00 39.56 4.09
7438 9818 4.344474 CCGTCGCCCGATAGCTCC 62.344 72.222 0.00 0.00 39.56 4.70
7439 9819 3.288290 CGTCGCCCGATAGCTCCT 61.288 66.667 0.00 0.00 39.56 3.69
7440 9820 2.646143 GTCGCCCGATAGCTCCTC 59.354 66.667 0.00 0.00 0.00 3.71
7441 9821 2.597805 TCGCCCGATAGCTCCTCC 60.598 66.667 0.00 0.00 0.00 4.30
7442 9822 3.686045 CGCCCGATAGCTCCTCCC 61.686 72.222 0.00 0.00 0.00 4.30
7443 9823 3.686045 GCCCGATAGCTCCTCCCG 61.686 72.222 0.00 0.00 0.00 5.14
7444 9824 3.686045 CCCGATAGCTCCTCCCGC 61.686 72.222 0.00 0.00 0.00 6.13
7445 9825 3.686045 CCGATAGCTCCTCCCGCC 61.686 72.222 0.00 0.00 0.00 6.13
7446 9826 4.044484 CGATAGCTCCTCCCGCCG 62.044 72.222 0.00 0.00 0.00 6.46
7447 9827 4.365505 GATAGCTCCTCCCGCCGC 62.366 72.222 0.00 0.00 0.00 6.53
7512 9892 4.933064 CCGTCCGCCGCTCAGATC 62.933 72.222 0.00 0.00 34.38 2.75
7513 9893 4.933064 CGTCCGCCGCTCAGATCC 62.933 72.222 0.00 0.00 0.00 3.36
7514 9894 4.933064 GTCCGCCGCTCAGATCCG 62.933 72.222 0.00 0.00 0.00 4.18
7557 9937 4.493747 CCCGGACTCCGCGAACTC 62.494 72.222 8.23 0.00 46.86 3.01
7558 9938 4.493747 CCGGACTCCGCGAACTCC 62.494 72.222 8.23 6.77 46.86 3.85
7559 9939 4.831307 CGGACTCCGCGAACTCCG 62.831 72.222 19.24 19.24 41.17 4.63
7560 9940 4.493747 GGACTCCGCGAACTCCGG 62.494 72.222 8.23 0.00 46.88 5.14
7578 9958 3.787001 CCGGCCCCTGTCCTTCTC 61.787 72.222 0.00 0.00 0.00 2.87
7579 9959 3.787001 CGGCCCCTGTCCTTCTCC 61.787 72.222 0.00 0.00 0.00 3.71
7580 9960 2.285743 GGCCCCTGTCCTTCTCCT 60.286 66.667 0.00 0.00 0.00 3.69
7581 9961 2.371259 GGCCCCTGTCCTTCTCCTC 61.371 68.421 0.00 0.00 0.00 3.71
7582 9962 1.613630 GCCCCTGTCCTTCTCCTCA 60.614 63.158 0.00 0.00 0.00 3.86
7583 9963 1.904990 GCCCCTGTCCTTCTCCTCAC 61.905 65.000 0.00 0.00 0.00 3.51
7584 9964 0.252467 CCCCTGTCCTTCTCCTCACT 60.252 60.000 0.00 0.00 0.00 3.41
7585 9965 1.650528 CCCTGTCCTTCTCCTCACTT 58.349 55.000 0.00 0.00 0.00 3.16
7586 9966 1.552792 CCCTGTCCTTCTCCTCACTTC 59.447 57.143 0.00 0.00 0.00 3.01
7587 9967 1.203523 CCTGTCCTTCTCCTCACTTCG 59.796 57.143 0.00 0.00 0.00 3.79
7588 9968 1.203523 CTGTCCTTCTCCTCACTTCGG 59.796 57.143 0.00 0.00 0.00 4.30
7589 9969 0.108567 GTCCTTCTCCTCACTTCGGC 60.109 60.000 0.00 0.00 0.00 5.54
7590 9970 1.153745 CCTTCTCCTCACTTCGGCG 60.154 63.158 0.00 0.00 0.00 6.46
7591 9971 1.595993 CCTTCTCCTCACTTCGGCGA 61.596 60.000 4.99 4.99 0.00 5.54
7592 9972 0.179150 CTTCTCCTCACTTCGGCGAG 60.179 60.000 10.46 7.26 0.00 5.03
7593 9973 2.202676 CTCCTCACTTCGGCGAGC 60.203 66.667 10.46 0.00 0.00 5.03
7594 9974 2.676822 TCCTCACTTCGGCGAGCT 60.677 61.111 10.46 0.00 0.00 4.09
7595 9975 2.202676 CCTCACTTCGGCGAGCTC 60.203 66.667 10.46 2.73 0.00 4.09
7596 9976 2.202676 CTCACTTCGGCGAGCTCC 60.203 66.667 10.46 0.47 0.00 4.70
7597 9977 2.676822 TCACTTCGGCGAGCTCCT 60.677 61.111 10.46 0.00 0.00 3.69
7598 9978 2.202676 CACTTCGGCGAGCTCCTC 60.203 66.667 10.46 0.00 0.00 3.71
7599 9979 2.676822 ACTTCGGCGAGCTCCTCA 60.677 61.111 10.46 0.00 0.00 3.86
7600 9980 2.055042 ACTTCGGCGAGCTCCTCAT 61.055 57.895 10.46 0.00 0.00 2.90
7601 9981 1.299773 CTTCGGCGAGCTCCTCATC 60.300 63.158 10.46 0.00 0.00 2.92
7602 9982 2.009424 CTTCGGCGAGCTCCTCATCA 62.009 60.000 10.46 0.00 0.00 3.07
7603 9983 1.604147 TTCGGCGAGCTCCTCATCAA 61.604 55.000 10.46 0.00 0.00 2.57
7604 9984 1.880340 CGGCGAGCTCCTCATCAAC 60.880 63.158 8.47 0.00 0.00 3.18
7605 9985 1.519719 GGCGAGCTCCTCATCAACT 59.480 57.895 8.47 0.00 0.00 3.16
7606 9986 0.529555 GGCGAGCTCCTCATCAACTC 60.530 60.000 8.47 0.00 0.00 3.01
7607 9987 0.529555 GCGAGCTCCTCATCAACTCC 60.530 60.000 8.47 0.00 0.00 3.85
7608 9988 0.248825 CGAGCTCCTCATCAACTCCG 60.249 60.000 8.47 0.00 0.00 4.63
7609 9989 0.103937 GAGCTCCTCATCAACTCCGG 59.896 60.000 0.87 0.00 0.00 5.14
7610 9990 1.522580 GCTCCTCATCAACTCCGGC 60.523 63.158 0.00 0.00 0.00 6.13
7611 9991 1.965754 GCTCCTCATCAACTCCGGCT 61.966 60.000 0.00 0.00 0.00 5.52
7643 10023 2.519541 TCTCCGGCGAGATCCAGG 60.520 66.667 9.30 0.00 40.34 4.45
7648 10028 2.524394 GGCGAGATCCAGGCCCTA 60.524 66.667 0.00 0.00 41.01 3.53
7649 10029 2.737830 GCGAGATCCAGGCCCTAC 59.262 66.667 0.00 0.00 0.00 3.18
7662 10042 4.189188 CCTACCTCGACGGCCGTG 62.189 72.222 39.65 26.80 39.75 4.94
7663 10043 4.849329 CTACCTCGACGGCCGTGC 62.849 72.222 39.65 25.04 39.75 5.34
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
103 104 1.271379 CGGGGGTGTTGTGAGAAAGAT 60.271 52.381 0.00 0.00 0.00 2.40
171 174 0.537653 GTACTGGAGCTGGGAGGAAC 59.462 60.000 0.00 0.00 0.00 3.62
188 191 1.220749 GCGGCAACTCAGGGATGTA 59.779 57.895 0.00 0.00 0.00 2.29
239 242 1.798813 CAGACCTTCACACCGCTTTAC 59.201 52.381 0.00 0.00 0.00 2.01
254 257 2.287248 GCAACAGCTCTTGAAACAGACC 60.287 50.000 5.84 0.00 0.00 3.85
298 301 1.429930 TAGGTGTTGGAGGAGTGCAA 58.570 50.000 0.00 0.00 0.00 4.08
358 361 3.706055 CCCACCGAATGACTATGGG 57.294 57.895 0.00 0.00 44.02 4.00
380 383 2.261671 CTCTGCGGCCGTAACTGT 59.738 61.111 28.70 0.00 0.00 3.55
430 433 3.932710 GCATGAGAGGTTGAATACGACAA 59.067 43.478 0.00 0.00 32.40 3.18
467 470 1.156736 AAGGCGTGACTGCACATAAC 58.843 50.000 0.00 0.00 45.41 1.89
492 495 1.002868 GAGCTCTGCCACATGGTGT 60.003 57.895 6.43 0.00 37.57 4.16
514 517 0.256464 TGATGAGCATGACCATGGCA 59.744 50.000 13.04 11.62 39.16 4.92
547 550 5.541484 AGAGAACCCTCAAATTTTCATGCTT 59.459 36.000 0.00 0.00 41.87 3.91
592 595 3.066814 GACGACCTACCCGTGCCT 61.067 66.667 0.00 0.00 40.67 4.75
604 607 2.260481 GTCATCCCTTTCTTCGACGAC 58.740 52.381 0.00 0.00 0.00 4.34
605 608 1.135489 CGTCATCCCTTTCTTCGACGA 60.135 52.381 3.83 0.00 46.76 4.20
606 609 1.135489 TCGTCATCCCTTTCTTCGACG 60.135 52.381 0.00 0.00 45.56 5.12
649 652 5.515534 CCAATCCCTCTCTTCCTTTTCTTCA 60.516 44.000 0.00 0.00 0.00 3.02
679 682 2.896039 AGACACTTCTGCCCTTAGACT 58.104 47.619 0.00 0.00 0.00 3.24
727 730 2.607038 GCCACCGTCCATTCTTTTTGAC 60.607 50.000 0.00 0.00 0.00 3.18
728 731 1.611491 GCCACCGTCCATTCTTTTTGA 59.389 47.619 0.00 0.00 0.00 2.69
729 732 1.665735 CGCCACCGTCCATTCTTTTTG 60.666 52.381 0.00 0.00 0.00 2.44
752 758 3.638627 GGGTCTTGATTCCATTCCAATCC 59.361 47.826 0.00 0.00 30.30 3.01
767 773 3.692593 CCCTATTTTAACACCGGGTCTTG 59.307 47.826 6.32 0.00 0.00 3.02
795 801 6.183360 CCCTTATTTGACACCGGAGACTAATA 60.183 42.308 9.46 11.15 0.00 0.98
888 899 2.512896 GAGCCCCGCTGATTGGAT 59.487 61.111 0.00 0.00 39.88 3.41
889 900 4.161295 CGAGCCCCGCTGATTGGA 62.161 66.667 0.00 0.00 39.88 3.53
890 901 4.473520 ACGAGCCCCGCTGATTGG 62.474 66.667 0.00 0.00 39.88 3.16
891 902 2.892425 GACGAGCCCCGCTGATTG 60.892 66.667 0.00 0.00 39.88 2.67
892 903 3.390521 TGACGAGCCCCGCTGATT 61.391 61.111 0.00 0.00 39.88 2.57
893 904 4.148825 GTGACGAGCCCCGCTGAT 62.149 66.667 0.00 0.00 39.88 2.90
1035 1053 1.073025 TGTGGCTGTGGTTGCTAGG 59.927 57.895 0.00 0.00 0.00 3.02
1131 1150 4.361971 ACGAGTGCGAGGAGGGGA 62.362 66.667 0.00 0.00 41.64 4.81
1133 1152 2.272918 GAAGACGAGTGCGAGGAGGG 62.273 65.000 0.00 0.00 41.64 4.30
1141 1160 1.444553 CGGACAGGAAGACGAGTGC 60.445 63.158 0.00 0.00 0.00 4.40
1142 1161 1.444553 GCGGACAGGAAGACGAGTG 60.445 63.158 0.00 0.00 0.00 3.51
1143 1162 2.637383 GGCGGACAGGAAGACGAGT 61.637 63.158 0.00 0.00 0.00 4.18
1144 1163 2.182030 GGCGGACAGGAAGACGAG 59.818 66.667 0.00 0.00 0.00 4.18
1423 1487 4.430765 CTAGCGCCAACGGACGGT 62.431 66.667 2.29 6.74 43.27 4.83
1543 1607 1.271856 TTACTCCATCAGCCGTGGAA 58.728 50.000 4.18 0.00 44.69 3.53
1544 1608 1.207089 CTTTACTCCATCAGCCGTGGA 59.793 52.381 2.74 2.74 43.26 4.02
1551 1615 2.648059 CCAAGGCCTTTACTCCATCAG 58.352 52.381 17.61 0.00 0.00 2.90
1552 1616 1.340991 GCCAAGGCCTTTACTCCATCA 60.341 52.381 17.61 0.00 34.56 3.07
1629 1693 2.563261 AGGAAGAAGAAAACCGGACC 57.437 50.000 9.46 0.00 0.00 4.46
1671 1735 0.816018 TCGCAATTGGAACACACGGT 60.816 50.000 7.72 0.00 39.29 4.83
1672 1736 0.309302 TTCGCAATTGGAACACACGG 59.691 50.000 7.72 0.00 39.29 4.94
1985 2266 2.096417 GGCGATTTACATGACATACCGC 60.096 50.000 0.00 7.13 39.43 5.68
2027 2308 5.642063 CCTCATTTATAGGTGACGTTGTGTT 59.358 40.000 0.00 0.00 0.00 3.32
2113 2395 9.197694 GCTACTACACATCAACTATTCATTAGG 57.802 37.037 0.00 0.00 31.68 2.69
2114 2396 9.197694 GGCTACTACACATCAACTATTCATTAG 57.802 37.037 0.00 0.00 0.00 1.73
2122 2404 5.396324 CCAATGGGCTACTACACATCAACTA 60.396 44.000 0.00 0.00 0.00 2.24
2139 2421 0.761802 GGAGGACTCTAGCCAATGGG 59.238 60.000 0.00 0.00 37.18 4.00
2153 2435 4.658901 AGAAAAGTTGGAGTGTTAGGAGGA 59.341 41.667 0.00 0.00 0.00 3.71
2154 2436 4.974399 AGAAAAGTTGGAGTGTTAGGAGG 58.026 43.478 0.00 0.00 0.00 4.30
2406 2712 6.899114 ACATGTTCGATTTCAAGTTAGGTTC 58.101 36.000 0.00 0.00 0.00 3.62
2435 2741 8.970691 ACATATTTTTCTGAGGAATTTTCGTG 57.029 30.769 0.00 0.00 0.00 4.35
2465 2771 7.253422 AGTTGCAAGCATATTAGACATTTGAC 58.747 34.615 0.00 0.00 0.00 3.18
2609 3634 5.373812 AGTGCTACCCAATAAATACTGCT 57.626 39.130 0.00 0.00 0.00 4.24
2613 3638 6.935208 CCTCCTTAGTGCTACCCAATAAATAC 59.065 42.308 0.00 0.00 34.03 1.89
2625 3650 2.799017 TGTCGTTCCTCCTTAGTGCTA 58.201 47.619 0.00 0.00 0.00 3.49
2734 3868 7.386299 GGTGTTGCACAAAAACATAAATATGGA 59.614 33.333 5.48 0.00 39.57 3.41
2804 3938 3.254060 CTCGACGTCATCAACAAATCCT 58.746 45.455 17.16 0.00 0.00 3.24
2870 4004 2.867109 AGTGACTAGCAAACATGCCT 57.133 45.000 0.00 0.00 34.90 4.75
2905 4039 8.262601 AGGAGTTTTGAAATAACCTTTCCAAT 57.737 30.769 0.00 0.00 0.00 3.16
2922 4056 6.043243 TGTTGATTCTCTACCAGAGGAGTTTT 59.957 38.462 3.47 0.00 42.54 2.43
2947 4081 1.006102 CCGAGTTCAAGCCACGACT 60.006 57.895 0.00 0.00 0.00 4.18
2956 4090 2.432874 TGTCACTTTCCTCCGAGTTCAA 59.567 45.455 0.00 0.00 0.00 2.69
3013 4213 0.474660 AGGACCCAAGCTTCCTCTGT 60.475 55.000 0.00 0.00 37.77 3.41
3074 4275 1.200948 GTTCGCTTACACCCTACGAGT 59.799 52.381 0.00 0.00 33.84 4.18
3082 4283 1.454653 GACTTGTCGTTCGCTTACACC 59.545 52.381 0.00 0.00 0.00 4.16
3146 4347 6.053632 TGATGTCAGAAAAGGATCTTGCTA 57.946 37.500 0.00 0.00 0.00 3.49
3165 4366 7.678947 ACAACTAAGAGGACAAAGATTGATG 57.321 36.000 0.00 0.00 0.00 3.07
3166 4367 7.939039 TGAACAACTAAGAGGACAAAGATTGAT 59.061 33.333 0.00 0.00 0.00 2.57
3167 4368 7.279615 TGAACAACTAAGAGGACAAAGATTGA 58.720 34.615 0.00 0.00 0.00 2.57
3168 4369 7.496529 TGAACAACTAAGAGGACAAAGATTG 57.503 36.000 0.00 0.00 0.00 2.67
3169 4370 7.939039 TCATGAACAACTAAGAGGACAAAGATT 59.061 33.333 0.00 0.00 0.00 2.40
3170 4371 7.453393 TCATGAACAACTAAGAGGACAAAGAT 58.547 34.615 0.00 0.00 0.00 2.40
3171 4372 6.826668 TCATGAACAACTAAGAGGACAAAGA 58.173 36.000 0.00 0.00 0.00 2.52
3172 4373 7.496529 TTCATGAACAACTAAGAGGACAAAG 57.503 36.000 3.38 0.00 0.00 2.77
3173 4374 6.017109 GCTTCATGAACAACTAAGAGGACAAA 60.017 38.462 3.38 0.00 0.00 2.83
3174 4375 5.470098 GCTTCATGAACAACTAAGAGGACAA 59.530 40.000 3.38 0.00 0.00 3.18
3176 4377 4.393371 GGCTTCATGAACAACTAAGAGGAC 59.607 45.833 3.38 0.00 0.00 3.85
3178 4379 3.691609 GGGCTTCATGAACAACTAAGAGG 59.308 47.826 3.38 0.00 0.00 3.69
3180 4381 4.041567 TCAGGGCTTCATGAACAACTAAGA 59.958 41.667 3.38 0.00 0.00 2.10
3181 4382 4.154918 GTCAGGGCTTCATGAACAACTAAG 59.845 45.833 3.38 0.00 0.00 2.18
3182 4383 4.072131 GTCAGGGCTTCATGAACAACTAA 58.928 43.478 3.38 0.00 0.00 2.24
3183 4384 3.072330 TGTCAGGGCTTCATGAACAACTA 59.928 43.478 3.38 0.00 0.00 2.24
3184 4385 2.158623 TGTCAGGGCTTCATGAACAACT 60.159 45.455 3.38 0.00 0.00 3.16
3185 4386 2.229792 TGTCAGGGCTTCATGAACAAC 58.770 47.619 3.38 0.00 0.00 3.32
3186 4387 2.655090 TGTCAGGGCTTCATGAACAA 57.345 45.000 3.38 0.00 0.00 2.83
3187 4388 2.885135 ATGTCAGGGCTTCATGAACA 57.115 45.000 3.38 0.00 0.00 3.18
3188 4389 2.424956 GGAATGTCAGGGCTTCATGAAC 59.575 50.000 3.38 1.87 0.00 3.18
3189 4390 2.309755 AGGAATGTCAGGGCTTCATGAA 59.690 45.455 8.12 8.12 0.00 2.57
3190 4391 1.918262 AGGAATGTCAGGGCTTCATGA 59.082 47.619 0.00 0.00 0.00 3.07
3191 4392 2.022195 CAGGAATGTCAGGGCTTCATG 58.978 52.381 0.00 0.00 0.00 3.07
3192 4393 1.684248 GCAGGAATGTCAGGGCTTCAT 60.684 52.381 0.00 0.00 0.00 2.57
3193 4394 0.322816 GCAGGAATGTCAGGGCTTCA 60.323 55.000 0.00 0.00 0.00 3.02
3194 4395 1.034292 GGCAGGAATGTCAGGGCTTC 61.034 60.000 0.00 0.00 0.00 3.86
3195 4396 1.000396 GGCAGGAATGTCAGGGCTT 60.000 57.895 0.00 0.00 0.00 4.35
3196 4397 0.621571 TAGGCAGGAATGTCAGGGCT 60.622 55.000 0.00 0.00 38.06 5.19
3197 4398 0.179034 CTAGGCAGGAATGTCAGGGC 60.179 60.000 0.00 0.00 0.00 5.19
3198 4399 0.179034 GCTAGGCAGGAATGTCAGGG 60.179 60.000 0.00 0.00 0.00 4.45
3199 4400 0.835941 AGCTAGGCAGGAATGTCAGG 59.164 55.000 0.00 0.00 0.00 3.86
3200 4401 1.761784 AGAGCTAGGCAGGAATGTCAG 59.238 52.381 0.00 0.00 0.00 3.51
3201 4402 1.483827 CAGAGCTAGGCAGGAATGTCA 59.516 52.381 0.00 0.00 0.00 3.58
3202 4403 1.809651 GCAGAGCTAGGCAGGAATGTC 60.810 57.143 4.31 0.00 0.00 3.06
3203 4404 0.179936 GCAGAGCTAGGCAGGAATGT 59.820 55.000 4.31 0.00 0.00 2.71
3204 4405 0.534652 GGCAGAGCTAGGCAGGAATG 60.535 60.000 10.84 0.00 0.00 2.67
3205 4406 0.984961 TGGCAGAGCTAGGCAGGAAT 60.985 55.000 10.38 0.00 36.56 3.01
3206 4407 1.613332 TGGCAGAGCTAGGCAGGAA 60.613 57.895 10.38 0.00 36.56 3.36
3207 4408 2.039462 TGGCAGAGCTAGGCAGGA 59.961 61.111 10.38 0.00 36.56 3.86
3208 4409 2.188994 GTGGCAGAGCTAGGCAGG 59.811 66.667 14.16 0.00 42.55 4.85
3209 4410 1.153409 CAGTGGCAGAGCTAGGCAG 60.153 63.158 14.16 1.87 42.55 4.85
3210 4411 2.663075 CCAGTGGCAGAGCTAGGCA 61.663 63.158 10.38 10.38 39.41 4.75
3211 4412 2.188994 CCAGTGGCAGAGCTAGGC 59.811 66.667 0.00 5.37 0.00 3.93
3212 4413 1.557269 AACCCAGTGGCAGAGCTAGG 61.557 60.000 2.61 0.00 33.59 3.02
3213 4414 0.326264 AAACCCAGTGGCAGAGCTAG 59.674 55.000 2.61 0.00 33.59 3.42
3214 4415 1.278127 GTAAACCCAGTGGCAGAGCTA 59.722 52.381 2.61 0.00 33.59 3.32
3215 4416 0.036875 GTAAACCCAGTGGCAGAGCT 59.963 55.000 2.61 0.00 33.59 4.09
3216 4417 0.960861 GGTAAACCCAGTGGCAGAGC 60.961 60.000 2.61 0.00 33.59 4.09
3217 4418 0.693049 AGGTAAACCCAGTGGCAGAG 59.307 55.000 2.61 0.00 36.42 3.35
3218 4419 1.145571 AAGGTAAACCCAGTGGCAGA 58.854 50.000 2.61 0.00 36.42 4.26
3219 4420 1.995376 AAAGGTAAACCCAGTGGCAG 58.005 50.000 2.61 0.00 36.42 4.85
3220 4421 3.117436 ACTTAAAGGTAAACCCAGTGGCA 60.117 43.478 2.61 0.00 36.42 4.92
3221 4422 3.493334 ACTTAAAGGTAAACCCAGTGGC 58.507 45.455 2.61 0.00 36.42 5.01
3222 4423 5.872963 ACTACTTAAAGGTAAACCCAGTGG 58.127 41.667 0.63 0.63 36.42 4.00
3223 4424 7.116805 CGTTACTACTTAAAGGTAAACCCAGTG 59.883 40.741 0.00 0.00 36.42 3.66
3224 4425 7.154656 CGTTACTACTTAAAGGTAAACCCAGT 58.845 38.462 0.00 0.00 36.42 4.00
3225 4426 7.154656 ACGTTACTACTTAAAGGTAAACCCAG 58.845 38.462 0.00 0.00 36.42 4.45
3226 4427 7.061566 ACGTTACTACTTAAAGGTAAACCCA 57.938 36.000 0.00 0.00 36.42 4.51
3227 4428 7.962964 AACGTTACTACTTAAAGGTAAACCC 57.037 36.000 0.00 0.00 36.42 4.11
3291 4492 4.545823 TTTAACAAGAAACTGCGTGGAG 57.454 40.909 0.00 0.00 0.00 3.86
3421 5606 1.144913 TGGCAGGCTTTTAACTGACCT 59.855 47.619 0.00 0.00 42.13 3.85
3486 5671 1.281867 CACCACTAGGCCAATGGAAGA 59.718 52.381 22.83 0.00 39.06 2.87
3555 5740 4.653801 ACACCTAGGCCACAAGAAATTTTT 59.346 37.500 9.30 0.00 0.00 1.94
3556 5741 4.223144 ACACCTAGGCCACAAGAAATTTT 58.777 39.130 9.30 0.00 0.00 1.82
3557 5742 3.826729 GACACCTAGGCCACAAGAAATTT 59.173 43.478 9.30 0.00 0.00 1.82
3558 5743 3.074538 AGACACCTAGGCCACAAGAAATT 59.925 43.478 9.30 0.00 0.00 1.82
3559 5744 2.644798 AGACACCTAGGCCACAAGAAAT 59.355 45.455 9.30 0.00 0.00 2.17
3571 5756 6.378564 CCAGGTATATCATGGTAGACACCTAG 59.621 46.154 12.58 4.61 45.98 3.02
3670 5855 0.179215 GGAAAGTGTGCGAATCAGCG 60.179 55.000 0.00 0.00 40.67 5.18
3673 5858 2.807967 CAGAAGGAAAGTGTGCGAATCA 59.192 45.455 0.00 0.00 0.00 2.57
3746 5931 6.428159 AGCCACATAACTTAGCTATATTGCAC 59.572 38.462 11.72 0.00 34.99 4.57
3903 6089 8.343168 ACTATATACTGATGAAGGTGAGTAGC 57.657 38.462 0.00 0.00 0.00 3.58
3973 6165 0.107643 GCTCCTCCTTGTATCCCTGC 59.892 60.000 0.00 0.00 0.00 4.85
4021 6213 7.829378 AACCGAGAAAATTCATCTGTACTAC 57.171 36.000 0.00 0.00 0.00 2.73
4022 6214 7.148474 GCAAACCGAGAAAATTCATCTGTACTA 60.148 37.037 0.00 0.00 0.00 1.82
4023 6215 6.348540 GCAAACCGAGAAAATTCATCTGTACT 60.349 38.462 0.00 0.00 0.00 2.73
4059 6251 8.761689 ACCTGATTTACTTGGCATTTCATAAAT 58.238 29.630 0.00 0.00 0.00 1.40
4273 6473 6.424812 AGAAATGTTTTGAAGCAAATACCAGC 59.575 34.615 0.00 0.00 33.19 4.85
4307 6507 1.022735 CTGCATTGTGAGGAGATGGC 58.977 55.000 0.00 0.00 0.00 4.40
4314 6516 0.601558 AAGCTTGCTGCATTGTGAGG 59.398 50.000 1.84 0.00 45.94 3.86
4418 6620 5.756195 TTTCACTCTGAAAAGGTGACATG 57.244 39.130 0.00 0.00 42.72 3.21
4481 6683 8.094798 AGTTCGCTGATTAACTGTGAATAAAA 57.905 30.769 0.00 0.00 44.27 1.52
4482 6684 7.667043 AGTTCGCTGATTAACTGTGAATAAA 57.333 32.000 0.00 0.00 44.27 1.40
4609 6811 3.141767 ACAGGAAAGGGCTTGTTAGTC 57.858 47.619 0.00 0.00 0.00 2.59
4687 6889 5.886096 GCAACTTCCTGCCATAATGGAACA 61.886 45.833 0.00 0.00 40.96 3.18
4777 6979 2.940147 TGTTTATTTCGCAAGCGCAAT 58.060 38.095 15.69 15.69 38.62 3.56
4791 6993 7.038799 AGCAAATTTCCTCTGAACCATGTTTAT 60.039 33.333 0.00 0.00 0.00 1.40
4799 7001 3.823304 AGACAGCAAATTTCCTCTGAACC 59.177 43.478 14.84 6.83 0.00 3.62
4835 7037 5.366477 TCAGATACTGGGAAATGAGCATGTA 59.634 40.000 0.00 0.00 31.51 2.29
4903 7105 1.028330 CATCGTTGTCCAGCCATGCT 61.028 55.000 0.00 0.00 40.77 3.79
5009 7211 4.572389 ACCTAGTATGAGCATGAAAAAGCG 59.428 41.667 0.00 0.00 35.48 4.68
5192 7394 2.668457 GAGATTAGACAACAGCCACACG 59.332 50.000 0.00 0.00 0.00 4.49
5323 7525 2.708216 TGGCATCCGATTTGCTTCTA 57.292 45.000 4.59 0.00 40.03 2.10
5673 7958 0.309302 TCCATGGTGTTTTCGCAACG 59.691 50.000 12.58 0.00 0.00 4.10
5884 8170 2.794631 GCCCTGTGAAAACACAAACGAG 60.795 50.000 0.00 0.00 34.35 4.18
5893 8179 1.896660 TCCAGCGCCCTGTGAAAAC 60.897 57.895 2.29 0.00 37.38 2.43
5997 8283 1.779221 TCCCCCATTATTTGCAGCTG 58.221 50.000 10.11 10.11 0.00 4.24
5998 8284 2.548464 TTCCCCCATTATTTGCAGCT 57.452 45.000 0.00 0.00 0.00 4.24
6004 8290 7.534852 TGCAGAAGTATATTCCCCCATTATTT 58.465 34.615 0.00 0.00 0.00 1.40
6069 8355 7.911130 ACTATCTATATGGCATGTAGCTCAT 57.089 36.000 22.24 14.77 44.79 2.90
6070 8356 7.724490 AACTATCTATATGGCATGTAGCTCA 57.276 36.000 22.24 9.37 44.79 4.26
6151 8437 4.158394 AGCTGCATCGACCAAATAACATTT 59.842 37.500 1.02 0.00 0.00 2.32
6154 8440 2.710377 AGCTGCATCGACCAAATAACA 58.290 42.857 1.02 0.00 0.00 2.41
6155 8441 3.764885 AAGCTGCATCGACCAAATAAC 57.235 42.857 1.02 0.00 0.00 1.89
6156 8442 3.755905 TCAAAGCTGCATCGACCAAATAA 59.244 39.130 1.02 0.00 0.00 1.40
6189 8475 4.067192 TCACACAGTGGACAAATCATGAG 58.933 43.478 5.31 0.00 33.87 2.90
6206 8492 7.137490 TGAAATTCAGAAGTCATGATCACAC 57.863 36.000 0.00 0.00 0.00 3.82
6251 8537 8.883731 CATTGTTTCTTTTACAGTCGAGGATAT 58.116 33.333 0.00 0.00 0.00 1.63
6326 8649 9.643693 CAATTTCCATATTACTATGAAATGCCC 57.356 33.333 1.80 0.00 37.51 5.36
6338 8661 8.806146 AGCACATAATCCCAATTTCCATATTAC 58.194 33.333 0.00 0.00 0.00 1.89
6350 8715 5.989168 CACGTATCTTAGCACATAATCCCAA 59.011 40.000 0.00 0.00 0.00 4.12
6366 8731 5.038651 ACTAAGACTAGGCTCACGTATCT 57.961 43.478 0.00 0.00 0.00 1.98
6367 8732 5.058490 AGACTAAGACTAGGCTCACGTATC 58.942 45.833 0.00 0.00 39.55 2.24
6369 8734 4.484537 AGACTAAGACTAGGCTCACGTA 57.515 45.455 0.00 0.00 39.55 3.57
6371 8736 3.065648 GGAAGACTAAGACTAGGCTCACG 59.934 52.174 0.00 0.00 43.28 4.35
6372 8737 3.065648 CGGAAGACTAAGACTAGGCTCAC 59.934 52.174 0.00 0.00 43.28 3.51
6441 8809 5.961396 TTTTTAGCACGGCCAATAACTTA 57.039 34.783 2.24 0.00 0.00 2.24
6501 8869 4.751767 AATTTTGGCTTGAAAGTGGACA 57.248 36.364 0.00 0.00 0.00 4.02
6502 8870 6.084326 TCTAATTTTGGCTTGAAAGTGGAC 57.916 37.500 0.00 0.00 0.00 4.02
6616 8984 8.610896 CCAAACATTTGCAAGAAAGAATACAAA 58.389 29.630 0.00 0.00 36.86 2.83
6645 9013 4.916831 CGAAAACAATGTCAAAGCTGCATA 59.083 37.500 1.02 0.00 0.00 3.14
6657 9025 4.326009 GTGAACAAAGCACGAAAACAATGT 59.674 37.500 0.00 0.00 0.00 2.71
6668 9036 2.658285 CATCAGCAGTGAACAAAGCAC 58.342 47.619 0.00 0.00 35.88 4.40
6682 9050 0.804989 AGGCTACAAAACGCATCAGC 59.195 50.000 0.00 0.00 37.42 4.26
6703 9071 1.794512 CAAAGGGCCGAAAAATGGTG 58.205 50.000 0.00 0.00 0.00 4.17
6707 9075 0.321346 CCTGCAAAGGGCCGAAAAAT 59.679 50.000 0.00 0.00 43.89 1.82
6712 9080 3.884774 ACACCTGCAAAGGGCCGA 61.885 61.111 0.00 0.00 43.89 5.54
6714 9082 2.203480 TCACACCTGCAAAGGGCC 60.203 61.111 0.00 0.00 43.89 5.80
6715 9083 1.518903 GAGTCACACCTGCAAAGGGC 61.519 60.000 0.00 0.00 45.13 5.19
6719 9087 2.361757 CCAATTGAGTCACACCTGCAAA 59.638 45.455 7.12 0.00 0.00 3.68
6725 9093 2.359900 CTAGGCCAATTGAGTCACACC 58.640 52.381 5.01 0.00 0.00 4.16
6737 9105 1.839994 ACATTAGCTCAGCTAGGCCAA 59.160 47.619 6.46 0.00 42.34 4.52
6744 9113 4.003648 GGTGTTACAACATTAGCTCAGCT 58.996 43.478 3.60 3.60 41.59 4.24
6746 9115 3.689649 GGGGTGTTACAACATTAGCTCAG 59.310 47.826 1.86 0.00 41.59 3.35
6757 9126 4.304048 AATTACATCCGGGGTGTTACAA 57.696 40.909 19.71 7.44 0.00 2.41
6758 9127 4.304048 AAATTACATCCGGGGTGTTACA 57.696 40.909 19.71 3.63 0.00 2.41
6759 9128 4.096833 GGAAAATTACATCCGGGGTGTTAC 59.903 45.833 19.71 0.00 0.00 2.50
6760 9129 4.263816 TGGAAAATTACATCCGGGGTGTTA 60.264 41.667 19.71 10.31 38.63 2.41
6761 9130 3.093814 GGAAAATTACATCCGGGGTGTT 58.906 45.455 19.71 0.00 0.00 3.32
6762 9131 2.041891 TGGAAAATTACATCCGGGGTGT 59.958 45.455 18.45 18.45 38.63 4.16
6763 9132 2.729194 TGGAAAATTACATCCGGGGTG 58.271 47.619 5.55 5.55 38.63 4.61
6764 9133 3.680777 ATGGAAAATTACATCCGGGGT 57.319 42.857 0.00 2.79 38.63 4.95
6765 9134 6.041523 ACAATTATGGAAAATTACATCCGGGG 59.958 38.462 0.00 0.00 38.63 5.73
6766 9135 7.049799 ACAATTATGGAAAATTACATCCGGG 57.950 36.000 0.00 0.00 38.63 5.73
6767 9136 9.458374 GTTACAATTATGGAAAATTACATCCGG 57.542 33.333 0.00 0.00 38.63 5.14
6772 9141 9.451002 TCGGAGTTACAATTATGGAAAATTACA 57.549 29.630 0.00 0.00 28.98 2.41
6773 9142 9.712359 GTCGGAGTTACAATTATGGAAAATTAC 57.288 33.333 0.00 0.00 28.98 1.89
6774 9143 9.675464 AGTCGGAGTTACAATTATGGAAAATTA 57.325 29.630 0.00 0.00 28.98 1.40
6775 9144 8.575649 AGTCGGAGTTACAATTATGGAAAATT 57.424 30.769 0.00 0.00 28.98 1.82
6776 9145 8.047310 AGAGTCGGAGTTACAATTATGGAAAAT 58.953 33.333 0.00 0.00 28.98 1.82
6777 9146 7.333423 CAGAGTCGGAGTTACAATTATGGAAAA 59.667 37.037 0.00 0.00 28.98 2.29
6778 9147 6.816640 CAGAGTCGGAGTTACAATTATGGAAA 59.183 38.462 0.00 0.00 28.98 3.13
6779 9148 6.338146 CAGAGTCGGAGTTACAATTATGGAA 58.662 40.000 0.00 0.00 0.00 3.53
6780 9149 5.681437 GCAGAGTCGGAGTTACAATTATGGA 60.681 44.000 0.00 0.00 0.00 3.41
6781 9150 4.508124 GCAGAGTCGGAGTTACAATTATGG 59.492 45.833 0.00 0.00 0.00 2.74
6782 9151 4.508124 GGCAGAGTCGGAGTTACAATTATG 59.492 45.833 0.00 0.00 0.00 1.90
6783 9152 4.161565 TGGCAGAGTCGGAGTTACAATTAT 59.838 41.667 0.00 0.00 0.00 1.28
6784 9153 3.512329 TGGCAGAGTCGGAGTTACAATTA 59.488 43.478 0.00 0.00 0.00 1.40
6785 9154 2.301870 TGGCAGAGTCGGAGTTACAATT 59.698 45.455 0.00 0.00 0.00 2.32
6786 9155 1.899814 TGGCAGAGTCGGAGTTACAAT 59.100 47.619 0.00 0.00 0.00 2.71
6787 9156 1.334160 TGGCAGAGTCGGAGTTACAA 58.666 50.000 0.00 0.00 0.00 2.41
6788 9157 1.557099 ATGGCAGAGTCGGAGTTACA 58.443 50.000 0.00 0.00 0.00 2.41
6789 9158 2.674796 AATGGCAGAGTCGGAGTTAC 57.325 50.000 0.00 0.00 0.00 2.50
6790 9159 2.093658 GGAAATGGCAGAGTCGGAGTTA 60.094 50.000 0.00 0.00 0.00 2.24
6791 9160 1.339151 GGAAATGGCAGAGTCGGAGTT 60.339 52.381 0.00 0.00 0.00 3.01
6792 9161 0.250513 GGAAATGGCAGAGTCGGAGT 59.749 55.000 0.00 0.00 0.00 3.85
6793 9162 0.807667 CGGAAATGGCAGAGTCGGAG 60.808 60.000 0.00 0.00 0.00 4.63
6794 9163 1.218047 CGGAAATGGCAGAGTCGGA 59.782 57.895 0.00 0.00 0.00 4.55
6795 9164 1.815421 CCGGAAATGGCAGAGTCGG 60.815 63.158 0.00 7.51 0.00 4.79
6796 9165 3.799753 CCGGAAATGGCAGAGTCG 58.200 61.111 0.00 0.00 0.00 4.18
6804 9173 5.588648 TCTCATAACTTAAAGCCGGAAATGG 59.411 40.000 5.05 0.00 0.00 3.16
6805 9174 6.677781 TCTCATAACTTAAAGCCGGAAATG 57.322 37.500 5.05 0.00 0.00 2.32
6806 9175 7.254795 CGAATCTCATAACTTAAAGCCGGAAAT 60.255 37.037 5.05 0.00 0.00 2.17
6807 9176 6.036735 CGAATCTCATAACTTAAAGCCGGAAA 59.963 38.462 5.05 0.00 0.00 3.13
6808 9177 5.522460 CGAATCTCATAACTTAAAGCCGGAA 59.478 40.000 5.05 0.00 0.00 4.30
6809 9178 5.047847 CGAATCTCATAACTTAAAGCCGGA 58.952 41.667 5.05 0.00 0.00 5.14
6810 9179 4.809426 ACGAATCTCATAACTTAAAGCCGG 59.191 41.667 0.00 0.00 0.00 6.13
6811 9180 5.276868 CCACGAATCTCATAACTTAAAGCCG 60.277 44.000 0.00 0.00 0.00 5.52
6812 9181 5.585047 ACCACGAATCTCATAACTTAAAGCC 59.415 40.000 0.00 0.00 0.00 4.35
6813 9182 6.663944 ACCACGAATCTCATAACTTAAAGC 57.336 37.500 0.00 0.00 0.00 3.51
6814 9183 7.414098 CCCAACCACGAATCTCATAACTTAAAG 60.414 40.741 0.00 0.00 0.00 1.85
6815 9184 6.373216 CCCAACCACGAATCTCATAACTTAAA 59.627 38.462 0.00 0.00 0.00 1.52
6816 9185 5.878116 CCCAACCACGAATCTCATAACTTAA 59.122 40.000 0.00 0.00 0.00 1.85
6817 9186 5.046159 ACCCAACCACGAATCTCATAACTTA 60.046 40.000 0.00 0.00 0.00 2.24
6818 9187 4.261801 CCCAACCACGAATCTCATAACTT 58.738 43.478 0.00 0.00 0.00 2.66
6819 9188 3.263425 ACCCAACCACGAATCTCATAACT 59.737 43.478 0.00 0.00 0.00 2.24
6820 9189 3.606687 ACCCAACCACGAATCTCATAAC 58.393 45.455 0.00 0.00 0.00 1.89
6821 9190 3.992943 ACCCAACCACGAATCTCATAA 57.007 42.857 0.00 0.00 0.00 1.90
6822 9191 3.992943 AACCCAACCACGAATCTCATA 57.007 42.857 0.00 0.00 0.00 2.15
6823 9192 2.819608 CAAACCCAACCACGAATCTCAT 59.180 45.455 0.00 0.00 0.00 2.90
6824 9193 2.226330 CAAACCCAACCACGAATCTCA 58.774 47.619 0.00 0.00 0.00 3.27
6825 9194 2.031157 CACAAACCCAACCACGAATCTC 60.031 50.000 0.00 0.00 0.00 2.75
6826 9195 1.953686 CACAAACCCAACCACGAATCT 59.046 47.619 0.00 0.00 0.00 2.40
6827 9196 1.679153 ACACAAACCCAACCACGAATC 59.321 47.619 0.00 0.00 0.00 2.52
6828 9197 1.679153 GACACAAACCCAACCACGAAT 59.321 47.619 0.00 0.00 0.00 3.34
6829 9198 1.096416 GACACAAACCCAACCACGAA 58.904 50.000 0.00 0.00 0.00 3.85
6830 9199 0.253610 AGACACAAACCCAACCACGA 59.746 50.000 0.00 0.00 0.00 4.35
6831 9200 1.064952 GAAGACACAAACCCAACCACG 59.935 52.381 0.00 0.00 0.00 4.94
6832 9201 1.064952 CGAAGACACAAACCCAACCAC 59.935 52.381 0.00 0.00 0.00 4.16
6833 9202 1.340211 ACGAAGACACAAACCCAACCA 60.340 47.619 0.00 0.00 0.00 3.67
6834 9203 1.385528 ACGAAGACACAAACCCAACC 58.614 50.000 0.00 0.00 0.00 3.77
6835 9204 3.497297 AAACGAAGACACAAACCCAAC 57.503 42.857 0.00 0.00 0.00 3.77
6836 9205 3.839293 CAAAACGAAGACACAAACCCAA 58.161 40.909 0.00 0.00 0.00 4.12
6837 9206 2.416162 GCAAAACGAAGACACAAACCCA 60.416 45.455 0.00 0.00 0.00 4.51
6838 9207 2.190161 GCAAAACGAAGACACAAACCC 58.810 47.619 0.00 0.00 0.00 4.11
6839 9208 2.869897 TGCAAAACGAAGACACAAACC 58.130 42.857 0.00 0.00 0.00 3.27
6840 9209 5.448926 AAATGCAAAACGAAGACACAAAC 57.551 34.783 0.00 0.00 0.00 2.93
6841 9210 5.669848 GCAAAATGCAAAACGAAGACACAAA 60.670 36.000 0.00 0.00 44.26 2.83
6842 9211 4.201666 GCAAAATGCAAAACGAAGACACAA 60.202 37.500 0.00 0.00 44.26 3.33
6843 9212 3.305629 GCAAAATGCAAAACGAAGACACA 59.694 39.130 0.00 0.00 44.26 3.72
6844 9213 3.849123 GCAAAATGCAAAACGAAGACAC 58.151 40.909 0.00 0.00 44.26 3.67
6857 9226 3.881780 TGCAAAACATGAGCAAAATGC 57.118 38.095 0.00 0.75 45.46 3.56
6863 9232 1.885233 TCGGATTGCAAAACATGAGCA 59.115 42.857 1.71 0.91 36.32 4.26
6864 9233 2.253603 GTCGGATTGCAAAACATGAGC 58.746 47.619 1.71 0.00 0.00 4.26
6865 9234 3.058016 AGTGTCGGATTGCAAAACATGAG 60.058 43.478 1.71 0.00 0.00 2.90
6866 9235 2.884012 AGTGTCGGATTGCAAAACATGA 59.116 40.909 1.71 0.51 0.00 3.07
6867 9236 3.236816 GAGTGTCGGATTGCAAAACATG 58.763 45.455 1.71 0.00 0.00 3.21
6868 9237 2.228822 GGAGTGTCGGATTGCAAAACAT 59.771 45.455 1.71 0.00 0.00 2.71
6869 9238 1.606668 GGAGTGTCGGATTGCAAAACA 59.393 47.619 1.71 3.17 0.00 2.83
6922 9292 3.139397 AGAATGTTTAACACCCCCTCACA 59.861 43.478 0.00 0.00 0.00 3.58
6928 9298 3.062122 TCCGAGAATGTTTAACACCCC 57.938 47.619 0.00 0.00 0.00 4.95
7050 9421 0.185175 ACAAGAGGCCTTTCCGGTTT 59.815 50.000 6.77 0.00 40.77 3.27
7151 9522 1.210870 GTGTAGTTTTCGACCACGCA 58.789 50.000 0.00 0.00 39.58 5.24
7417 9797 3.974757 CTATCGGGCGACGGGGAC 61.975 72.222 0.00 0.00 44.45 4.46
7420 9800 4.344474 GAGCTATCGGGCGACGGG 62.344 72.222 0.00 0.00 44.45 5.28
7421 9801 4.344474 GGAGCTATCGGGCGACGG 62.344 72.222 0.00 0.00 44.45 4.79
7422 9802 3.256716 GAGGAGCTATCGGGCGACG 62.257 68.421 0.00 0.00 46.11 5.12
7423 9803 2.646143 GAGGAGCTATCGGGCGAC 59.354 66.667 0.00 0.00 37.29 5.19
7424 9804 2.597805 GGAGGAGCTATCGGGCGA 60.598 66.667 0.00 0.00 37.29 5.54
7425 9805 3.686045 GGGAGGAGCTATCGGGCG 61.686 72.222 0.00 0.00 37.29 6.13
7426 9806 3.686045 CGGGAGGAGCTATCGGGC 61.686 72.222 0.00 0.00 0.00 6.13
7427 9807 3.686045 GCGGGAGGAGCTATCGGG 61.686 72.222 0.00 0.00 0.00 5.14
7428 9808 3.686045 GGCGGGAGGAGCTATCGG 61.686 72.222 0.00 0.00 34.52 4.18
7429 9809 4.044484 CGGCGGGAGGAGCTATCG 62.044 72.222 0.00 0.00 34.52 2.92
7430 9810 4.365505 GCGGCGGGAGGAGCTATC 62.366 72.222 9.78 0.00 34.52 2.08
7495 9875 4.933064 GATCTGAGCGGCGGACGG 62.933 72.222 9.78 0.00 44.51 4.79
7497 9877 4.933064 CGGATCTGAGCGGCGGAC 62.933 72.222 9.78 0.00 33.94 4.79
7504 9884 4.593864 GTCCCGCCGGATCTGAGC 62.594 72.222 5.05 4.03 41.40 4.26
7505 9885 3.917760 GGTCCCGCCGGATCTGAG 61.918 72.222 5.05 0.00 41.40 3.35
7543 9923 4.493747 CCGGAGTTCGCGGAGTCC 62.494 72.222 28.61 28.61 37.59 3.85
7561 9941 3.787001 GAGAAGGACAGGGGCCGG 61.787 72.222 0.00 0.00 0.00 6.13
7562 9942 3.787001 GGAGAAGGACAGGGGCCG 61.787 72.222 0.00 0.00 0.00 6.13
7563 9943 2.285743 AGGAGAAGGACAGGGGCC 60.286 66.667 0.00 0.00 0.00 5.80
7564 9944 1.613630 TGAGGAGAAGGACAGGGGC 60.614 63.158 0.00 0.00 0.00 5.80
7565 9945 0.252467 AGTGAGGAGAAGGACAGGGG 60.252 60.000 0.00 0.00 0.00 4.79
7566 9946 1.552792 GAAGTGAGGAGAAGGACAGGG 59.447 57.143 0.00 0.00 0.00 4.45
7567 9947 1.203523 CGAAGTGAGGAGAAGGACAGG 59.796 57.143 0.00 0.00 0.00 4.00
7568 9948 1.203523 CCGAAGTGAGGAGAAGGACAG 59.796 57.143 0.00 0.00 0.00 3.51
7569 9949 1.257743 CCGAAGTGAGGAGAAGGACA 58.742 55.000 0.00 0.00 0.00 4.02
7570 9950 0.108567 GCCGAAGTGAGGAGAAGGAC 60.109 60.000 0.00 0.00 0.00 3.85
7571 9951 1.595993 CGCCGAAGTGAGGAGAAGGA 61.596 60.000 0.00 0.00 0.00 3.36
7572 9952 1.153745 CGCCGAAGTGAGGAGAAGG 60.154 63.158 0.00 0.00 0.00 3.46
7573 9953 0.179150 CTCGCCGAAGTGAGGAGAAG 60.179 60.000 0.00 0.00 45.25 2.85
7574 9954 1.883732 CTCGCCGAAGTGAGGAGAA 59.116 57.895 0.00 0.00 45.25 2.87
7575 9955 3.592070 CTCGCCGAAGTGAGGAGA 58.408 61.111 0.00 0.00 45.25 3.71
7580 9960 2.676822 AGGAGCTCGCCGAAGTGA 60.677 61.111 7.83 0.00 0.00 3.41
7581 9961 2.202676 GAGGAGCTCGCCGAAGTG 60.203 66.667 7.83 0.00 0.00 3.16
7582 9962 2.010582 GATGAGGAGCTCGCCGAAGT 62.011 60.000 7.83 0.00 32.35 3.01
7583 9963 1.299773 GATGAGGAGCTCGCCGAAG 60.300 63.158 7.83 0.00 32.35 3.79
7584 9964 1.604147 TTGATGAGGAGCTCGCCGAA 61.604 55.000 7.83 0.00 32.35 4.30
7585 9965 2.052104 TTGATGAGGAGCTCGCCGA 61.052 57.895 7.83 0.00 32.35 5.54
7586 9966 1.880340 GTTGATGAGGAGCTCGCCG 60.880 63.158 7.83 0.00 32.35 6.46
7587 9967 0.529555 GAGTTGATGAGGAGCTCGCC 60.530 60.000 7.83 2.16 32.35 5.54
7588 9968 0.529555 GGAGTTGATGAGGAGCTCGC 60.530 60.000 7.83 2.75 32.35 5.03
7589 9969 0.248825 CGGAGTTGATGAGGAGCTCG 60.249 60.000 7.83 0.00 32.35 5.03
7590 9970 0.103937 CCGGAGTTGATGAGGAGCTC 59.896 60.000 4.71 4.71 0.00 4.09
7591 9971 1.965754 GCCGGAGTTGATGAGGAGCT 61.966 60.000 5.05 0.00 0.00 4.09
7592 9972 1.522580 GCCGGAGTTGATGAGGAGC 60.523 63.158 5.05 0.00 0.00 4.70
7593 9973 0.179089 CAGCCGGAGTTGATGAGGAG 60.179 60.000 5.05 0.00 0.00 3.69
7594 9974 1.900351 CAGCCGGAGTTGATGAGGA 59.100 57.895 5.05 0.00 0.00 3.71
7595 9975 1.817099 GCAGCCGGAGTTGATGAGG 60.817 63.158 5.05 0.00 0.00 3.86
7596 9976 1.817099 GGCAGCCGGAGTTGATGAG 60.817 63.158 5.05 0.00 0.00 2.90
7597 9977 2.268920 GGCAGCCGGAGTTGATGA 59.731 61.111 5.05 0.00 0.00 2.92
7598 9978 3.197790 CGGCAGCCGGAGTTGATG 61.198 66.667 27.32 0.00 44.15 3.07
7632 10012 2.737830 GTAGGGCCTGGATCTCGC 59.262 66.667 18.53 0.00 0.00 5.03
7645 10025 4.189188 CACGGCCGTCGAGGTAGG 62.189 72.222 31.80 11.20 43.70 3.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.